Jatropha Genome Database

JcCA0066101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0066101.10 + phase: 1 /partial
         (67 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G12150.1 | Symbols:  | pleckstrin homology (PH) domain-contai...   102   4e-23
AT5G12150.2 | Symbols:  | pleckstrin homology (PH) domain-contai...   102   4e-23
AT5G19390.4 | Symbols:  | pleckstrin homology (PH) domain-contai...    98   1e-21
AT5G19390.3 | Symbols:  | pleckstrin homology (PH) domain-contai...    97   2e-21
AT5G19390.2 | Symbols:  | pleckstrin homology (PH) domain-contai...    97   2e-21
AT5G19390.1 | Symbols:  | pleckstrin homology (PH) domain-contai...    97   2e-21
AT4G24580.1 | Symbols: REN1 | REN1 (ROP1 ENHANCER 1); Rho GTPase...    88   1e-18

>AT5G12150.1 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:3924393-3930100 REVERSE
          Length = 827

 Score =  102 bits (255), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 52/67 (77%)

Query: 1   TKVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCC 60
           TKVEGILRQSAD             GK+EF P+ED HVVGDCVKHVLR+LPSSPVPASCC
Sbjct: 196 TKVEGILRQSADVEEVERRVQEYEQGKTEFSPEEDPHVVGDCVKHVLRQLPSSPVPASCC 255

Query: 61  TALLEAY 67
           TALLEAY
Sbjct: 256 TALLEAY 262


>AT5G12150.2 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:3924632-3930100 REVERSE
          Length = 772

 Score =  102 bits (255), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 52/67 (77%)

Query: 1   TKVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCC 60
           TKVEGILRQSAD             GK+EF P+ED HVVGDCVKHVLR+LPSSPVPASCC
Sbjct: 196 TKVEGILRQSADVEEVERRVQEYEQGKTEFSPEEDPHVVGDCVKHVLRQLPSSPVPASCC 255

Query: 61  TALLEAY 67
           TALLEAY
Sbjct: 256 TALLEAY 262


>AT5G19390.4 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:6531906-6537143 FORWARD
          Length = 714

 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 50/67 (74%)

Query: 1   TKVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCC 60
           TK+EGILRQSAD             GK+EF  DED HVVGDC+KHVLRELPSSPV ASCC
Sbjct: 191 TKIEGILRQSADVEEVERRVQEYEQGKTEFTFDEDPHVVGDCIKHVLRELPSSPVSASCC 250

Query: 61  TALLEAY 67
           TALLEAY
Sbjct: 251 TALLEAY 257


>AT5G19390.3 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:6531906-6538069 FORWARD
          Length = 822

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/67 (70%), Positives = 50/67 (74%)

Query: 1   TKVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCC 60
           TK+EGILRQSAD             GK+EF  DED HVVGDC+KHVLRELPSSPV ASCC
Sbjct: 191 TKIEGILRQSADVEEVERRVQEYEQGKTEFTFDEDPHVVGDCIKHVLRELPSSPVSASCC 250

Query: 61  TALLEAY 67
           TALLEAY
Sbjct: 251 TALLEAY 257


>AT5G19390.2 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:6531906-6538206 FORWARD
          Length = 870

 Score = 97.1 bits (240), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/67 (70%), Positives = 50/67 (74%)

Query: 1   TKVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCC 60
           TK+EGILRQSAD             GK+EF  DED HVVGDC+KHVLRELPSSPV ASCC
Sbjct: 191 TKIEGILRQSADVEEVERRVQEYEQGKTEFTFDEDPHVVGDCIKHVLRELPSSPVSASCC 250

Query: 61  TALLEAY 67
           TALLEAY
Sbjct: 251 TALLEAY 257


>AT5G19390.1 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:6531906-6538206 FORWARD
          Length = 870

 Score = 97.1 bits (240), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/67 (70%), Positives = 50/67 (74%)

Query: 1   TKVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCC 60
           TK+EGILRQSAD             GK+EF  DED HVVGDC+KHVLRELPSSPV ASCC
Sbjct: 191 TKIEGILRQSADVEEVERRVQEYEQGKTEFTFDEDPHVVGDCIKHVLRELPSSPVSASCC 250

Query: 61  TALLEAY 67
           TALLEAY
Sbjct: 251 TALLEAY 257


>AT4G24580.1 | Symbols: REN1 | REN1 (ROP1 ENHANCER 1); Rho GTPase
           activator/ Rho GTPase binding / phosphoinositide binding
           | chr4:12687879-12694248 REVERSE
          Length = 939

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 48/65 (73%)

Query: 2   KVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCCT 61
           ++EGILRQ+AD             GK+EF P+EDAH++ DC+K+ LRELPSSPVPASCC 
Sbjct: 238 RIEGILRQAADVDDVEHRIREYEKGKNEFSPEEDAHIIADCLKYFLRELPSSPVPASCCN 297

Query: 62  ALLEA 66
           ALLEA
Sbjct: 298 ALLEA 302