Jatropha Genome Database
- JcCA0065711.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0065711.10 + phase: 0
(277 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27600.2 | Symbols: | glycosyl transferase family 43 protein... 233 1e-61
AT1G27600.1 | Symbols: | glycosyl transferase family 43 protein... 233 1e-61
AT2G37090.1 | Symbols: IRX9 | IRX9 (IRREGULAR XYLEM 9); transfer... 104 7e-23
AT4G36890.1 | Symbols: IRX14 | IRX14 (irregular xylem 14); trans... 79 3e-15
AT5G67230.1 | Symbols: | glycosyl transferase family 43 protein... 75 4e-14
>AT1G27600.2 | Symbols: | glycosyl transferase family 43 protein |
chr1:9604083-9605881 REVERSE
Length = 394
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/277 (49%), Positives = 174/277 (62%), Gaps = 24/277 (8%)
Query: 1 MASIRRTLSPAYHDRTYQXXXXXXXXXXXXXXXXHKFFTNSGTKYSTPFASSLFSFNVFP 60
MASIRRTLSP YHDR+++ HK FT G+ S+ SS F +
Sbjct: 1 MASIRRTLSPMYHDRSHENGGS------------HKGFTIGGS--SSKHNSSQFLSYLTK 46
Query: 61 LRWFLTAAFFQKRKGFRRSLYRCXXXXXXXXXXXXXXXXXXENDVQNHD-FSFEIKPPHV 119
L + +R +RR Y+ E DV D FSFEIK P+V
Sbjct: 47 LLGVTSDPKSSRRGPWRRPFYQFLVFFLLGFVLGLTPFGKME-DVNGSDRFSFEIKQPYV 105
Query: 120 NVQLDDGGGDNRGIKRDVFALNSVSLGVDTQVNYISRFDYVPRKQLIVITPTYNRALQAF 179
+L+ NR KR+ A+++VS +T+ N ++VP+K LIV+TPTYNRA+QA+
Sbjct: 106 EERLE-----NR--KREEAAVDAVSFVAETE-NGKKEVNFVPKKLLIVVTPTYNRAMQAY 157
Query: 180 FLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAMYRHLVCERNSTNVKDRGVHQ 239
+LNR+ Q LRLV+ P+LWIVVE AS ET+EILRKTG MYRHLVC+RN T++KDRGVHQ
Sbjct: 158 YLNRVAQTLRLVESPVLWIVVEGNVASFETSEILRKTGVMYRHLVCKRNMTSIKDRGVHQ 217
Query: 240 RNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDI 276
RN ALEHIE H+LDGI YFADDDN+YSLELF+SLR I
Sbjct: 218 RNTALEHIELHKLDGIVYFADDDNIYSLELFQSLRQI 254
>AT1G27600.1 | Symbols: | glycosyl transferase family 43 protein |
chr1:9604083-9605881 REVERSE
Length = 394
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/277 (49%), Positives = 174/277 (62%), Gaps = 24/277 (8%)
Query: 1 MASIRRTLSPAYHDRTYQXXXXXXXXXXXXXXXXHKFFTNSGTKYSTPFASSLFSFNVFP 60
MASIRRTLSP YHDR+++ HK FT G+ S+ SS F +
Sbjct: 1 MASIRRTLSPMYHDRSHENGGS------------HKGFTIGGS--SSKHNSSQFLSYLTK 46
Query: 61 LRWFLTAAFFQKRKGFRRSLYRCXXXXXXXXXXXXXXXXXXENDVQNHD-FSFEIKPPHV 119
L + +R +RR Y+ E DV D FSFEIK P+V
Sbjct: 47 LLGVTSDPKSSRRGPWRRPFYQFLVFFLLGFVLGLTPFGKME-DVNGSDRFSFEIKQPYV 105
Query: 120 NVQLDDGGGDNRGIKRDVFALNSVSLGVDTQVNYISRFDYVPRKQLIVITPTYNRALQAF 179
+L+ NR KR+ A+++VS +T+ N ++VP+K LIV+TPTYNRA+QA+
Sbjct: 106 EERLE-----NR--KREEAAVDAVSFVAETE-NGKKEVNFVPKKLLIVVTPTYNRAMQAY 157
Query: 180 FLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAMYRHLVCERNSTNVKDRGVHQ 239
+LNR+ Q LRLV+ P+LWIVVE AS ET+EILRKTG MYRHLVC+RN T++KDRGVHQ
Sbjct: 158 YLNRVAQTLRLVESPVLWIVVEGNVASFETSEILRKTGVMYRHLVCKRNMTSIKDRGVHQ 217
Query: 240 RNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDI 276
RN ALEHIE H+LDGI YFADDDN+YSLELF+SLR I
Sbjct: 218 RNTALEHIELHKLDGIVYFADDDNIYSLELFQSLRQI 254
>AT2G37090.1 | Symbols: IRX9 | IRX9 (IRREGULAR XYLEM 9);
transferase, transferring glycosyl groups /
xylosyltransferase | chr2:15587671-15589223 REVERSE
Length = 351
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 3/120 (2%)
Query: 160 VPRKQLIVITPTYNRA-LQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVE--TAEILRKT 216
PR +IV+TP + + L R+ LRLV PPLLWIVVE + E ++ +LRKT
Sbjct: 112 TPRGLVIVVTPIITKDRYKNVLLRRMANTLRLVPPPLLWIVVEKHSDGEEKSSSTMLRKT 171
Query: 217 GAMYRHLVCERNSTNVKDRGVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDI 276
G MYR +V + + T+++ HQRN+AL HIE H+L GI +FA +N+Y L+ F +RDI
Sbjct: 172 GIMYRRIVFKEDFTSLESELDHQRNLALRHIEHHKLSGIVHFAGLNNIYDLDFFVKIRDI 231
>AT4G36890.1 | Symbols: IRX14 | IRX14 (irregular xylem 14);
transferase, transferring glycosyl groups /
xylosyltransferase | chr4:17379631-17381627 REVERSE
Length = 525
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 157 FDYVPRKQLIVITPTYNRALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKT 216
F K +I +TPTY R QA L + L LV L+WIVVE A+ ET I+ K+
Sbjct: 154 FGMKSSKMVIAVTPTYVRTFQALHLTGVMHSLMLVPYDLVWIVVEAGGATNETGLIIAKS 213
Query: 217 GAMYRHL-VCERNSTNVKDRG---VHQRNVALEHIERHRLDGIAYFADDDNVYSLELFES 272
G H+ + +R +DR V R AL + +LDGI FADD N++S+ELF+
Sbjct: 214 GLRTIHVGIDQRMPNTWEDRSKLEVFMRLQALRVVREEKLDGIVMFADDSNMHSMELFDE 273
Query: 273 LRDIR 277
+++++
Sbjct: 274 IQNVK 278
>AT5G67230.1 | Symbols: | glycosyl transferase family 43 protein |
chr5:26822506-26824181 FORWARD
Length = 492
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 163 KQLIVITPTYNRALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAMYRH 222
+ +IV+TPTY R QA L + L LV L+WIVVE + ETA + K+G H
Sbjct: 152 RTVIVVTPTYVRTFQALHLTGVMHSLMLVPYDLVWIVVEAGGITNETASFIAKSGLKTIH 211
Query: 223 LVCERNSTNV-KDR---GVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDIR 277
L ++ N +DR R AL + +LDGI FADD N++S+ELF+ ++ ++
Sbjct: 212 LGFDQKMPNTWEDRHKLETKMRLHALRVVREKKLDGIVMFADDSNMHSMELFDEIQTVK 270