Jatropha Genome Database
- JcCA0062551.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0062551.10 + phase: 0 /partial
(538 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 620 e-178
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 264 9e-71
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 3e-69
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 4e-69
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 7e-68
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 1e-66
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 247 2e-65
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 2e-65
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 245 5e-65
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 8e-65
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 9e-65
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 240 1e-63
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 236 4e-62
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 1e-61
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 4e-61
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 4e-61
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 3e-60
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 1e-59
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 1e-59
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 3e-59
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 5e-59
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 8e-59
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 8e-59
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 1e-58
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 224 1e-58
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 1e-58
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 2e-58
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 3e-58
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 3e-58
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 5e-58
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 8e-58
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 3e-57
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 218 7e-57
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 217 1e-56
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 2e-56
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 3e-56
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 5e-56
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 5e-56
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 8e-56
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 9e-56
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 2e-55
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 3e-55
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 3e-55
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 4e-55
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 5e-55
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 5e-55
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 211 8e-55
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 1e-54
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 1e-54
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 3e-54
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 3e-54
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 5e-54
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 6e-54
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 6e-53
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 9e-53
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 203 2e-52
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 6e-52
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 2e-51
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 2e-51
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 199 5e-51
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 7e-51
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 8e-51
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 9e-51
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 197 1e-50
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 2e-50
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 2e-50
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 3e-50
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 4e-50
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 195 6e-50
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 195 6e-50
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 2e-49
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 194 2e-49
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 194 2e-49
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 3e-49
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 4e-49
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 190 2e-48
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 7e-48
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 7e-48
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 8e-48
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 1e-47
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 3e-47
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 4e-47
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 8e-47
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 184 9e-47
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 9e-47
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 2e-46
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 2e-46
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 183 3e-46
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 3e-46
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 5e-46
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 5e-46
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 182 5e-46
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 6e-46
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 181 1e-45
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 3e-45
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 4e-45
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 4e-45
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 178 6e-45
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 3e-44
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 3e-44
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 2e-43
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 4e-43
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 172 5e-43
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 1e-42
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 169 4e-42
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 167 2e-41
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 3e-41
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 3e-41
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 3e-41
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 166 3e-41
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 6e-41
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 165 7e-41
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 165 7e-41
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 7e-41
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 8e-41
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 9e-41
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 2e-40
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 2e-40
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 5e-40
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 5e-40
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 7e-40
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 1e-39
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 1e-39
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 1e-39
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 2e-39
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 160 2e-39
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 4e-39
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 8e-39
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 1e-38
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 1e-38
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 2e-38
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 5e-38
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 2e-37
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 3e-37
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 5e-37
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 7e-37
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 8e-37
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 8e-37
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 2e-36
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 2e-36
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 4e-36
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 149 5e-36
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 149 5e-36
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 148 9e-36
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 148 1e-35
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 2e-35
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 147 2e-35
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 2e-35
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 3e-35
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 5e-35
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 6e-35
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 144 2e-34
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 4e-34
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 6e-34
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 7e-34
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 9e-34
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 4e-33
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 5e-33
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 1e-32
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 2e-31
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 5e-31
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 8e-31
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 3e-30
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 125 6e-29
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 123 3e-28
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 8e-28
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 2e-27
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 3e-26
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 4e-26
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 4e-26
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 115 8e-26
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 114 1e-25
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 9e-25
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 4e-24
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 107 1e-23
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 8e-19
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 84 3e-16
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 83 4e-16
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 79 1e-14
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 77 2e-14
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 72 1e-12
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 70 3e-12
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 70 3e-12
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 69 5e-12
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 7e-12
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 68 2e-11
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 67 4e-11
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 66 5e-11
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 8e-11
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 65 1e-10
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 64 2e-10
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 63 4e-10
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 9e-10
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 9e-10
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 60 4e-09
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 59 7e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 59 1e-08
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 58 1e-08
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 58 2e-08
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-08
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 55 1e-07
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 54 3e-07
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 54 3e-07
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 54 3e-07
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 3e-07
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 54 4e-07
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 1e-06
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 620 bits (1600), Expect = e-178, Method: Compositional matrix adjust.
Identities = 300/529 (56%), Positives = 382/529 (72%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VHCR I LGFG N+++ S+LVGLY L L+D+ALKLFDE+ +RNLA NL+LR FC+ G
Sbjct: 134 VHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGE 193
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
L +Y ++L+ V NGL++CY+IRGCS+ R EG QLH V+K GW +NIFVAN
Sbjct: 194 SKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVAN 253
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
LVD+YSACG LS + +SF A+P +DV+SWNS++SV AD G LD+L+L MQFWGK+P
Sbjct: 254 VLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRP 313
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
SIR F+ FLN S+ + G QIHC V+KMGFD S+HVQSALIDMYGKC I+N+
Sbjct: 314 SIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALL 373
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
Y+SLP +LECCNSLMTSL+HCGI D+ EMFGLM+DEG G+DEVT ST
Sbjct: 374 YQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPE 433
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
HCCAIK GY +DV+VSCSLIDAY +SG +S+KVF+++ PN+FC TSIIN
Sbjct: 434 SLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIIN 493
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
G+A NG+G C++ML M R L PD VT L VL+GCSHSGLVEEG L+F+S+ES +GIS
Sbjct: 494 GYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGIS 553
Query: 424 PDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKI 483
P R ++CMV Q G DCV WSSLL+SCR+HRNET+GRRAA++
Sbjct: 554 PGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEV 613
Query: 484 LLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
L+ L+PE+FAV++QVS FY E G+FE S QI+EIA +R++ +EIG+S +
Sbjct: 614 LMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSV 662
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 167/369 (45%), Gaps = 4/369 (1%)
Query: 36 ALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSN 95
A + FDE+ R++ T+NL++ G G + LY E+ + + +F ++ CS+
Sbjct: 65 AHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSD 124
Query: 96 KRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNS 155
+ F EG Q+H VI +G+ N+FV +ALV Y+ + A K F + ++ N
Sbjct: 125 ELFCREGIQVHCRVISLGF-GCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNL 183
Query: 156 MLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMG 215
+L + G E+ M+ G + ++ + S G Q+H V+K G
Sbjct: 184 LLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSG 243
Query: 216 FDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMF 275
++ ++ V + L+D Y CGD+ ++ ++ ++P + NS+++ G V D ++F
Sbjct: 244 WNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLF 303
Query: 276 GLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYE-SDVSVSCSLIDAY 334
M G F + HC +K+G++ S + V +LID Y
Sbjct: 304 SKMQFWGKRPSIRPFMS--FLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMY 361
Query: 335 LRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFL 394
+ + S +++ +P N+ C S++ G+ K +EM MI +G D VT
Sbjct: 362 GKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLS 421
Query: 395 CVLTGCSHS 403
VL S S
Sbjct: 422 TVLKALSLS 430
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 4/295 (1%)
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
++ N +D G L A ++F + + DV+++N ++S + G L A+EL M
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
G + S +F L++ S G+Q+HC VI +GF ++ V+SAL+ +Y +
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGF-GCNMFVRSALVGLYACLRLVD 164
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
A+ ++ + +L CN L+ G +FE++ M EG+ + +T+
Sbjct: 165 VALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYC--YMIRG 222
Query: 299 XXXXXXXXXXXXXHCCAIKLGYE-SDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC 357
H +K G+ S++ V+ L+D Y G + S + F +P +V
Sbjct: 223 CSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVIS 282
Query: 358 FTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+ SI++ A G L++ M G +P F+ L CS + ++ G+ +
Sbjct: 283 WNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQI 337
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 264 bits (675), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 151/530 (28%), Positives = 277/530 (52%), Gaps = 8/530 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
N +HC A+K GF +++Y+ +SL+ LY R + A LFDE+P R++ +WN ++ G+C+
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G E L L N ++ ++ ++ L+ C+ F+ G +H + IK G +++ +FV
Sbjct: 230 GNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG-LESELFV 284
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
+N L+D Y+ G L + +K F + + D++SWNS++ Y N L A+ L M+
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
+P + + ++ S+ G+ + ++ G+ + + +A++ MY K G + +A
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG-IGLDEVTFSTXXXXXXXX 300
+ + LP T + N++++ G + EM+ +M +EG I ++ T+ +
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
H +K G DV V SL D Y + G + + +F QIP N + +
Sbjct: 465 GALRQGMKL--HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT 522
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLH 420
+I ++G G++ + + + M+ +G+KPD +TF+ +L+ CSHSGLV+EG+ F M++ +
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDY 582
Query: 421 GISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRA 480
GI+P H+ CMV + D +W +LL +CRVH N +G+ A
Sbjct: 583 GITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIA 642
Query: 481 AKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHS 530
++ L ++PE H+ +SN Y+ G++E +I+ IA + + K G S
Sbjct: 643 SEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 191/396 (48%), Gaps = 12/396 (3%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
N+ I + LV LY LG + LA FD + R++ WNL++ G+ G E++ ++
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 76 LDN-VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGC 134
L + + + +F +++ C R +G+++H +K G++ +++VA +L+ YS
Sbjct: 145 LSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFM-WDVYVAASLIHLYSRYKA 200
Query: 135 LSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL 194
+ A+ F +P+ D+ SWN+M+S Y +G +A E L + S+ + V L+
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSG---NAKEALTLSNGLRAMDSV-TVVSLLSA 256
Query: 195 SSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC 254
++ G+ G+ IH IK G ++ + V + LID+Y + G +++ ++ + + L
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLES-ELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 255 CNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCC 314
NS++ + +F M I D +T +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 315 AIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQC 374
K + D+++ +++ Y + G V ++ VF +P +V + +II+G+A NG +
Sbjct: 376 R-KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEA 434
Query: 375 LEMLEAMIRKG-LKPDRVTFLCVLTGCSHSGLVEEG 409
+EM M +G + ++ T++ VL CS +G + +G
Sbjct: 435 IEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/524 (29%), Positives = 271/524 (51%), Gaps = 9/524 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +K G+ ++ + SSLVG+Y + L + +L++FDE+PER++A+WN V+ F + G
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
++ L L+ ++ E N +S I CS + + G ++H +K G+ + + +V +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF-ELDEYVNS 247
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
ALVD Y C CL A++ FQ +P + +++WNSM+ Y G +E+L M G +P
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
S + L S++ N L G IH VI+ N ++V +LID+Y KCG+ A +
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIR-SVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+ E N +++S + G E++ MV G+ D VTF++
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
+L E+D + +L+D Y + G+ + ++F IP +V +T +I+
Sbjct: 427 EKGKQIHLSISESRL--ETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
+ +G ++ L + M + GLKPD VT L VL+ C H+GL++EG F+ M S +GI
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 424 PDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGD-CVMWSSLLRSCRVHRNETVGRRAAK 482
P +H+SCM+ QTP D + S+L +C +H ++G R A+
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 483 ILLGLDPEDFAVHLQVSNFYSETGEFEAS----MQIKEIAIARK 522
+L+ P+D + ++ + N Y+ ++A+ +++KE+ + +K
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKK 648
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 153/327 (46%), Gaps = 7/327 (2%)
Query: 89 LIRGCSNK-RFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPM 147
L+R C+N + +H ++ +G + ++ + +L++ Y C A+ F+ +
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLG-LRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 148 E-DVLSWNSMLSVYADNGLFLDALELL-YIMQFWGKKPSIRSFVGFLNLSSKTGNALFGM 205
DV WNS++S Y+ N +F D LE+ ++ P +F + G G
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
IH V+K G+ V V S+L+ MY K +N++ ++ +P + N++++
Sbjct: 128 MIHTLVVKSGYVCDVV-VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 266 GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVS 325
G + E+FG M G + V+ + C +K G+E D
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC--VKKGFELDEY 244
Query: 326 VSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKG 385
V+ +L+D Y + + ++++VF+++P ++ + S+I G+ G K C+E+L MI +G
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 386 LKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+P + T +L CS S + G+ +
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFI 331
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/535 (27%), Positives = 266/535 (49%), Gaps = 4/535 (0%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
S+H A+K ++Y+GSSL+ +Y R+G ID + ++F E+P RN TW ++ G G
Sbjct: 129 SLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAG 188
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+ E L ++E+ + +F ++ C+ R G +H HVI G+V T + VA
Sbjct: 189 RYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV-TTLCVA 247
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
N+L Y+ CG + + F+ + DV+SW S++ Y G + A+E M+
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP 307
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+ ++F + + ++G Q+HC V+ +G N S+ V ++++ MY CG++ +A
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL-NDSLSVSNSMMKMYSTCGNLVSASV 366
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
++ + + ++++ G ++ F+ F M G F+
Sbjct: 367 LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGT--KPTDFALASLLSVSGNM 424
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H A+ G E + +V SLI+ Y + G + + +F + ++ T++I
Sbjct: 425 AVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMI 484
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
NG+A +G K+ +++ E ++ G +PD VTF+ VLT C+HSG ++ G FN M+ + +
Sbjct: 485 NGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNM 544
Query: 423 SPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAK 482
P ++H+ CMV + + D V+W++LL +C+ + GRRAA+
Sbjct: 545 RPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAE 604
Query: 483 ILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNSC 537
+L LDP + ++N YS TG E + +++ A+ + KE G S I + C
Sbjct: 605 RILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDC 659
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 174/384 (45%), Gaps = 6/384 (1%)
Query: 31 GLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDN--VELNGLSFCY 88
G + A ++FD++P ++ +W +++ + DE L L++ +++ + V +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
+++ C G LH + +K + ++++V ++L+D Y G + ++ + F +P
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLL-SSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR 172
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
+ ++W ++++ G + + L M + +F L + +G IH
Sbjct: 173 NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
VI GF ++ V ++L MY +CG++++ + +E++ + SL+ + G
Sbjct: 233 THVIVRGFVT-TLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
E F M + + +E TF++ HC + LG +SVS
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFAS--MFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
S++ Y G+++ + +F+ + ++ +++II G+ G G++ + M + G KP
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP 409
Query: 389 DRVTFLCVLTGCSHSGLVEEGRLV 412
+L+ + ++E GR V
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQV 433
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 160/598 (26%), Positives = 281/598 (46%), Gaps = 67/598 (11%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH IK GF ++I + L+ Y + G ++ ++FD++P+RN+ TWN V+ G +LG
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 64 FDELLGLYNEI----------------KLDNVE---------------LNGLSFCYLIRG 92
DE L+ + + D E LN SF ++
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 93 CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLS 152
CS ++G Q+H + K ++ +++++ +ALVD YS CG +++A++ F + +V+S
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFL-SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 153 WNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVI 212
WNS+++ + NG ++AL++ +M +P + ++ + G ++H V+
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 213 KMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSL-------------------- 252
K + + +A +DMY KC IK A ++S+P+ ++
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 253 -----------ECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
N+L+ G ++ +F L+ E + +F+
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 302 XXXXXXXXXXHCCA----IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC 357
H + G E D+ V SLID Y++ G V VF ++ +
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 358 FTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSME 417
+ ++I GFA NG G + LE+ M+ G KPD +T + VL+ C H+G VEEGR F+SM
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 418 SLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVG 477
G++P RDH++CMV + P + D V+W SLL +C+VHRN T+G
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLG 580
Query: 478 RRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
+ A+ LL ++P + ++ +SN Y+E G++E M +++ +TK+ G S I +
Sbjct: 581 KYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 34/244 (13%)
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLM 259
+A++ +H VIK GF N + +Q+ LID Y KCG +++ ++ +P ++ NS++
Sbjct: 35 SAIYVRYVHASVIKSGFSN-EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVV 93
Query: 260 TSLLHCGIVDDVFEM-------------------------------FGLMVDEGIGLDEV 288
T L G +D+ + F +M EG L+E
Sbjct: 94 TGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEY 153
Query: 289 TFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFE 348
+F++ H K + SDV + +L+D Y + G+V +Q+VF+
Sbjct: 154 SFAS--VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD 211
Query: 349 QIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEE 408
++ NV + S+I F NG + L++ + M+ ++PD VT V++ C+ ++
Sbjct: 212 EMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV 271
Query: 409 GRLV 412
G+ V
Sbjct: 272 GQEV 275
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/533 (28%), Positives = 269/533 (50%), Gaps = 6/533 (1%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
VHC +K G G NL + L+ +Y + +A K+FD +PERN+ +W+ ++ G G
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
L L++E+ + N +F ++ C ++G Q+HG +K+G+ + + V
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF-EMMVEVG 145
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG-- 180
N+LVD YS CG ++EA+K F+ I ++SWN+M++ + G AL+ +MQ
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFD-NGSVHVQSALIDMYGKCGDIKN 239
++P + L S TG G QIH +++ GF S + +L+D+Y KCG + +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
A ++ + ++ +SL+ G + +F + + +D +F+
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID--SFALSSIIGVF 323
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFT 359
A+KL + SV S++D YL+ G V ++K F ++ L +V +T
Sbjct: 324 ADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWT 383
Query: 360 SIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESL 419
+I G+ +GLGK+ + + M+R ++PD V +L VL+ CSHSG+++EG +F+ +
Sbjct: 384 VVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 443
Query: 420 HGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRR 479
HGI P +H++C+V P + + +W +LL CRVH + +G+
Sbjct: 444 HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 503
Query: 480 AAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
KILL +D ++ A ++ +SN Y + G + +E+ + + KE G S +
Sbjct: 504 VGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWV 556
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 144/301 (47%), Gaps = 22/301 (7%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
++R C+ K D+G Q+H +++K G N+ +N L+D Y C A K F ++P
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSG-SGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFV------GFLNLSSKTGNAL 202
+V+SW++++S + NG +L L M G P+ +F G LN K
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK----- 125
Query: 203 FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSL 262
G+QIH +K+GF+ V V ++L+DMY KCG I A + + SL N+++
Sbjct: 126 -GLQIHGFCLKIGFEM-MVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Query: 263 LHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYE- 321
+H G + FG+M + I F+ H ++ G+
Sbjct: 184 VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 322 -SDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEA 380
S +++ SL+D Y++ G++ ++K F+QI + ++S+I G+A G E +EA
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEG------EFVEA 297
Query: 381 M 381
M
Sbjct: 298 M 298
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/537 (29%), Positives = 263/537 (48%), Gaps = 11/537 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH IK F ++++G++ V ++++ +D A K+F+ +PER+ TWN +L GFC+ G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
D+ L+ E++L+ + + ++ LI+ S ++ +H I++G VD + VAN
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG-VDVQVTVAN 192
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMED--VLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
+ Y CG L AK F+AI D V+SWNSM Y+ G DA L +M
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
KP + +F+ G IH I +G D + + I MY K D +A
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQ-DIEAINTFISMYSKSEDTCSAR 311
Query: 242 STYESLPMTSLECCN--SLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
++ MTS C + +++ G +D+ +F M+ G D VT +
Sbjct: 312 LLFD--IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSC-SLIDAYLRSGHVLLSQKVFEQIPLPNVFCF 358
A G + D + C +LID Y + G + ++ +F+ P V +
Sbjct: 370 FGSLETGKWIDAR--ADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 359 TSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES 418
T++I G+A NG+ + L++ MI KP+ +TFL VL C+HSG +E+G F+ M+
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 419 LHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGR 478
++ ISP DH+SCMV + D +W +LL +C++HRN +
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 479 RAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
+AA+ L L+P+ A +++++N Y+ G ++ +I+ I R + K G S+I +N
Sbjct: 548 QAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVN 604
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 164/368 (44%), Gaps = 12/368 (3%)
Query: 50 TWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEG--SQLHG 107
WNL +R E L L+ E+K E N +F ++ + C+ R D G +H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA--RLADVGCCEMVHA 76
Query: 108 HVIKVG-WVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLF 166
H+IK W D +FV A VD + C + A K F+ +P D +WN+MLS + +G
Sbjct: 77 HLIKSPFWSD--VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 167 LDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSA 226
A L M+ P + + + +S + +H I++G D V V +
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD-VQVTVANT 193
Query: 227 LIDMYGKCGDIKNAVSTYESLPM--TSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIG 284
I YGKCGD+ +A +E++ ++ NS+ + G D F ++ LM+ E
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 285 LDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQ 344
D TF H AI LG + D+ + I Y +S ++
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSH--AIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 345 KVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSG 404
+F+ + +T +I+G+A G + L + AMI+ G KPD VT L +++GC G
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 405 LVEEGRLV 412
+E G+ +
Sbjct: 372 SLETGKWI 379
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/535 (27%), Positives = 267/535 (49%), Gaps = 7/535 (1%)
Query: 4 VHCRAIKLGFGFN--LYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH A+KLGF N L + + L+ Y + +DLA LF+E+PE++ T+N ++ G+ +
Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKD 228
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
GL+ E + L+ +++ + + +F +++ F G QLH + G+ + V
Sbjct: 229 GLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGF-SRDASV 287
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
N ++DFYS + E + F +P D +S+N ++S Y+ + +L MQ G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
F L++++ + G Q+HC + + + +HV ++L+DMY KC + A
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
++SLP + +L++ + G+ ++F M + D+ TF+T
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
H I+ G +V L+D Y + G + + +VFE++P N + ++
Sbjct: 467 SLLLGKQL--HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
I+ A NG G+ + MI GL+PD V+ L VLT CSH G VE+G F +M ++G
Sbjct: 525 ISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYG 584
Query: 422 ISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAA 481
I+P + H++CM+ + P D +MWSS+L +CR+H+N+++ RAA
Sbjct: 585 ITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAA 644
Query: 482 KILLGLDP-EDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
+ L ++ D A ++ +SN Y+ GE+E +K+ R + K +S + +N
Sbjct: 645 EKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVN 699
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 177/390 (45%), Gaps = 8/390 (2%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEI- 74
N ++++ +++ G + A LFD +P+R + TW +++ + FDE L+ ++
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 75 KLDNVEL-NGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF--VANALVDFYSA 131
+ + L + ++F L+ GC++ + Q+H +K+G+ DTN F V+N L+ Y
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGF-DTNPFLTVSNVLLKSYCE 196
Query: 132 CGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGF 191
L A F+ IP +D +++N++++ Y +GL+ +++ L M+ G +PS +F G
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGV 256
Query: 192 LNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
L + G Q+H + GF + V + ++D Y K + ++ +P
Sbjct: 257 LKAVVGLHDFALGQQLHALSVTTGFSRDA-SVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 252 LECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXX 311
N +++S + F M + +G D F
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREM--QCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLG 371
HC A+ +S + V SL+D Y + ++ +F+ +P +T++I+G+ GL
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
L++ M L+ D+ TF VL +
Sbjct: 434 GAGLKLFTKMRGSNLRADQSTFATVLKASA 463
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 120/297 (40%), Gaps = 7/297 (2%)
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
N N ++ + G +S A+ F A+P V++W ++ YA N F +A +L M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM- 136
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGM---QIHCCVIKMGFD-NGSVHVQSALIDMYGK 233
++ V F L +A+ Q+H +K+GFD N + V + L+ Y +
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 234 CGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTX 293
+ A +E +P N+L+T G+ + +F M G + TFS
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS-- 254
Query: 294 XXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP 353
H ++ G+ D SV ++D Y + VL ++ +F+++P
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314
Query: 354 NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
+ + +I+ ++ + L M G F +L+ ++ ++ GR
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/525 (28%), Positives = 266/525 (50%), Gaps = 9/525 (1%)
Query: 9 IKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFD-EL 67
+K G +L +G+S + +Y R G A ++FDE+ +++ +WN +L G + G F E
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 68 LGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVD 127
+ ++ ++ + VEL+ +SF +I C ++ Q+HG IK G+ ++ + V N L+
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY-ESLLEVGNILMS 319
Query: 128 FYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRS 187
YS CG L K F + +V+SW +M+S D DA+ + M+F G P+ +
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVT 374
Query: 188 FVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESL 247
FVG +N G++IH IK GF + V ++ I +Y K +++A +E +
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVS-EPSVGNSFITLYAKFEALEDAKKAFEDI 433
Query: 248 PMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXX 307
+ N++++ G + +MF E + +E TF +
Sbjct: 434 TFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQ 492
Query: 308 XXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAW 367
H +KLG S VS +L+D Y + G++ S+KVF ++ N F +TSII+ ++
Sbjct: 493 GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 368 NGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRD 427
+G + + + MI++ + PD VTFL VLT C+ G+V++G +FN M ++ + P +
Sbjct: 553 HGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE 612
Query: 428 HFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGL 487
H+SCMV + PG M S+L SCR+H N +G + A++ + +
Sbjct: 613 HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEM 672
Query: 488 DPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
PE ++Q+ N Y+E E++ + +I++ + ++KE G S I
Sbjct: 673 KPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 182/399 (45%), Gaps = 14/399 (3%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + GF + + ++++G+Y + G D AL +F+ L + ++ +WN +L GF + +
Sbjct: 98 IHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI 157
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
L +K V + ++ + C F G QL V+K G +++++ V N
Sbjct: 158 ---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG-LESDLVVGN 213
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLF-LDALELLYIMQFWGKK 182
+ + YS G A++ F + +D++SWNS+LS + G F +A+ + M G +
Sbjct: 214 SFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE 273
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
SF + + QIH IK G+++ + V + L+ Y KCG ++ S
Sbjct: 274 LDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES-LLEVGNILMSRYSKCGVLEAVKS 332
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+ + ++ ++++S DD +F M +G+ +EVTF
Sbjct: 333 VFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTF--VGLINAVKCN 385
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H IK G+ S+ SV S I Y + + ++K FE I + + ++I
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 445
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
+GFA NG + L+M + + + P+ TF VL +
Sbjct: 446 SGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIA 483
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 18/254 (7%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H IK GF +G+S + LY + ++ A K F+++ R + +WN ++ GF + G
Sbjct: 394 IHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGF 453
Query: 64 FDELLGLY---------NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGW 114
E L ++ NE +V LN ++F I +G + H H++K+G
Sbjct: 454 SHEALKMFLSAAAETMPNEYTFGSV-LNAIAFAEDIS-------VKQGQRCHAHLLKLG- 504
Query: 115 VDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLY 174
+++ V++AL+D Y+ G + E++K F + ++ W S++S Y+ +G F + L +
Sbjct: 505 LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFH 564
Query: 175 IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
M P + +F+ L ++ G G +I +I++ S S ++DM G+
Sbjct: 565 KMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRA 624
Query: 235 GDIKNAVSTYESLP 248
G +K A +P
Sbjct: 625 GRLKEAEELMSEVP 638
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 266/533 (49%), Gaps = 7/533 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H R + LG F+ ++ + L+ G I A ++FD+LP + WN ++RG+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
F + L +Y+ ++L V + +F +L++ CS G +H V ++G+ D ++FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF-DADVFV 156
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMED--VLSWNSMLSVYADNGLFLDALELLYIMQFW 179
N L+ Y+ C L A+ F+ +P+ + ++SW +++S YA NG ++ALE+ M+
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
KP + V LN + + G IH V+KMG + + +L MY KCG +
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI-EPDLLISLNTMYAKCGQVAT 275
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
A ++ + +L N++++ G + +MF M+++ + D ++ ++
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFT 359
+ + Y DV +S +LID + + G V ++ VF++ +V ++
Sbjct: 336 VGSLEQARSMYEYVG--RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393
Query: 360 SIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESL 419
++I G+ +G ++ + + AM R G+ P+ VTFL +L C+HSG+V EG FN M
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD- 452
Query: 420 HGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRR 479
H I+P + H++C++ P + +W +LL +C+ HR+ +G
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEY 512
Query: 480 AAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
AA+ L +DP + ++Q+SN Y+ ++ +++ + + K++G S +
Sbjct: 513 AAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 263/536 (49%), Gaps = 16/536 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLF---DELPERNLATWNLVLRGF 58
+ VH K GF + + ++L+ +Y + G IDL+ ++F D++ +N+ N+++ F
Sbjct: 371 SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSF 428
Query: 59 CELGLFDELLGLYNEIKLDNVELNGLSFCYLIR--GCSNKRFFDEGSQLHGHVIKVGWVD 116
+ + + L+ + + + + S C L+ C N G Q+HG+ +K G V
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL-----GKQVHGYTLKSGLV- 482
Query: 117 TNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM 176
++ V ++L YS CG L E+ K FQ IP +D W SM+S + + G +A+ L M
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 177 QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGD 236
G P + L + S + G +IH ++ G D G + + SAL++MY KCG
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG-MDLGSALVNMYSKCGS 601
Query: 237 IKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX 296
+K A Y+ LP C+SL++ G++ D F +F MV G +D +F+
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMD--SFAISSIL 659
Query: 297 XXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVF 356
H K+G ++ SV SL+ Y + G + K F QI P++
Sbjct: 660 KAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 357 CFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
+T++I +A +G + L++ M KG KPD+VTF+ VL+ CSH GLVEE NSM
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSM 779
Query: 417 ESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETV 476
+GI P+ H+ CMV + D ++W +LL +C++H +
Sbjct: 780 VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Query: 477 GRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
G+ AAK + L+P D ++ +SN +E GE++ + +++ + KE G S +
Sbjct: 840 GKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 184/410 (44%), Gaps = 9/410 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
V C IK+G+ F + S+L+ ++ + + A K+F + N+ WN ++ G
Sbjct: 172 VCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQN 231
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ + L++E+ + + + ++ ++ C++ G + VIK G D +FV
Sbjct: 232 YGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAED--VFVCT 289
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
A+VD Y+ CG ++EA + F IP V+SW MLS Y + ALE+ M+ G +
Sbjct: 290 AIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEI 349
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ + ++ + Q+H V K GF S V +ALI MY K GDI +
Sbjct: 350 NNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDS-SVAAALISMYSKSGDIDLSEQV 408
Query: 244 YESL-PMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+E L + N ++TS +F M+ EG+ DE + +
Sbjct: 409 FEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCS-----LLSVL 463
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H +K G D++V SL Y + G + S K+F+ IP + C+ S+I
Sbjct: 464 DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMI 523
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+GF G ++ + + M+ G PD T VLT CS + G+ +
Sbjct: 524 SGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 179/387 (46%), Gaps = 10/387 (2%)
Query: 15 FNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEI 74
F++++ SL+ Y G + A KLFD +P+ ++ + N+++ G+ + LF+E L ++++
Sbjct: 82 FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM 141
Query: 75 KLDNVELNGLSFCYLIRGCS--NKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSAC 132
E N +S+ +I CS F E + H IK+G+ + V +AL+D +S
Sbjct: 142 HFLGFEANEISYGSVISACSALQAPLFSE--LVCCHTIKMGYFFYEV-VESALIDVFSKN 198
Query: 133 GCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFL 192
+A K F+ +V WN++++ N + +L + M +KP ++ L
Sbjct: 199 LRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVL 258
Query: 193 NLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSL 252
+ FG + VIK G ++ V V +A++D+Y KCG + A+ + +P S+
Sbjct: 259 AACASLEKLRFGKVVQARVIKCGAED--VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 253 ECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXH 312
+++ E+F M G+ ++ T ++ H
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTS--VISACGRPSMVCEASQVH 374
Query: 313 CCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQI-PLPNVFCFTSIINGFAWNGLG 371
K G+ D SV+ +LI Y +SG + LS++VFE + + +I F+ +
Sbjct: 375 AWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKP 434
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLT 398
+ + + M+++GL+ D + +L+
Sbjct: 435 GKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 191/410 (46%), Gaps = 27/410 (6%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
V R IK G ++++ +++V LY + G + A+++F +P ++ +W ++L G+ +
Sbjct: 273 VQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSND 331
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVG-WVDTNIFVA 122
L ++ E++ VE+N + +I C E SQ+H V K G ++D++ VA
Sbjct: 332 AFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSS--VA 389
Query: 123 NALVDFYSACGCLSEAKKSFQ---AIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
AL+ YS G + +++ F+ I ++++ N M++ ++ + A+ L M
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 180 GKKP------SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGK 233
G + S+ S + LNL G Q+H +K G + V S+L +Y K
Sbjct: 448 GLRTDEFSVCSLLSVLDCLNL---------GKQVHGYTLKSGL-VLDLTVGSSLFTLYSK 497
Query: 234 CGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTX 293
CG ++ + ++ +P C S+++ G + + +F M+D+G DE T +
Sbjct: 498 CGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA- 556
Query: 294 XXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP 353
H ++ G + + + +L++ Y + G + L+++V++++P
Sbjct: 557 -VLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPEL 615
Query: 354 NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHS 403
+ +S+I+G++ +GL + + M+ G D +L + S
Sbjct: 616 DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 15/327 (4%)
Query: 97 RFFDEGSQ-----------LHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAI 145
RFF++ S L H+++ + ++F+ +L+ +YS G +++A K F I
Sbjct: 51 RFFNDQSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTI 110
Query: 146 PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGM 205
P DV+S N M+S Y + LF ++L M F G + + S+ ++ S LF
Sbjct: 111 PQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSE 170
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
+ C IKMG+ V V+SALID++ K ++A + ++ C N+++ L
Sbjct: 171 LVCCHTIKMGYFFYEV-VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRN 229
Query: 266 GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVS 325
VF++F M D T+S+ IK G E DV
Sbjct: 230 QNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQAR--VIKCGAE-DVF 286
Query: 326 VSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKG 385
V +++D Y + GH+ + +VF +IP P+V +T +++G+ + LE+ + M G
Sbjct: 287 VCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSG 346
Query: 386 LKPDRVTFLCVLTGCSHSGLVEEGRLV 412
++ + T V++ C +V E V
Sbjct: 347 VEINNCTVTSVISACGRPSMVCEASQV 373
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/538 (28%), Positives = 279/538 (51%), Gaps = 11/538 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH +K G + + +SL+ LY++ G + A LFD+ +++ TWN ++ G+ GL
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWV-DTNIFVA 122
E LG++ ++L+ V L+ SF +I+ C+N + QLH V+K G++ D NI
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI--R 333
Query: 123 NALVDFYSACGCLSEAKKSFQAIP-MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
AL+ YS C + +A + F+ I + +V+SW +M+S + N +A++L M+ G
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
+P+ ++ L + ++H V+K ++ S V +AL+D Y K G ++ A
Sbjct: 394 RPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSST-VGTALLDAYVKLGKVEEAA 448
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
+ + + ++++ G + +MFG + GI +E TFS+
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
H AIK +S + VS +L+ Y + G++ +++VF++ ++ + S+
Sbjct: 509 ASMGQGKQF-HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
I+G+A +G + L++ + M ++ +K D VTF+ V C+H+GLVEEG F+ M
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 422 ISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAA 481
I+P ++H SCMV P +W ++L +CRVH+ +GR AA
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAA 687
Query: 482 KILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGL-NSCY 538
+ ++ + PED A ++ +SN Y+E+G+++ +++++ R + KE G+S I + N Y
Sbjct: 688 EKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTY 745
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 210/403 (52%), Gaps = 13/403 (3%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC+ IK GF ++ +G+SLV YM+ K+FDE+ ERN+ TW ++ G+ +
Sbjct: 115 LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSM 174
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
DE+L L+ ++ + + N +F + + + G Q+H V+K G +D I V+N
Sbjct: 175 NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG-LDKTIPVSN 233
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+L++ Y CG + +A+ F ++ V++WNSM+S YA NGL L+AL + Y M+ +
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMG--FDNGSVHVQSALIDMYGKCGDIKNAV 241
S SF + L + F Q+HC V+K G FD ++++AL+ Y KC + +A+
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ---NIRTALMVAYSKCTAMLDAL 350
Query: 242 STYESLP-MTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXX 300
++ + + ++ ++++ L ++ ++F M +G+ +E T+S
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV------IL 404
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
H +K YE +V +L+DAY++ G V + KVF I ++ +++
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHS 403
++ G+A G + ++M + + G+KP+ TF +L C+ +
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 227/483 (46%), Gaps = 51/483 (10%)
Query: 36 ALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSN 95
A LFD+ P R+ ++ +L GF G E L+ I +E++ F +++ +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 96 KRFFDE--GSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSW 153
DE G QLH IK G++D ++ V +LVD Y + +K F + +V++W
Sbjct: 106 --LCDELFGRQLHCQCIKFGFLD-DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 154 NSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIK 213
+++S YA N + + L L MQ G +P+ +F L + ++ G G+Q+H V+K
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 214 MGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFE 273
G D ++ V ++LI++Y KCG+++ A ++ + S+ NS+++ G+ +
Sbjct: 223 NGLDK-TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 274 MFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDA 333
MF M + L E +F++ HC +K G+ D ++ +L+ A
Sbjct: 282 MFYSMRLNYVRLSESSFAS--VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339
Query: 334 YLRSGHVLLSQKVFEQIP-LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVT 392
Y + +L + ++F++I + NV +T++I+GF N ++ +++ M RKG++P+ T
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 393 FLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQT 452
+ +LT +L ISP H + +T
Sbjct: 400 YSVILT-------------------ALPVISPSEVHAQVV------------------KT 422
Query: 453 PGRGDCVMWSSLLRS-CRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEAS 511
+ ++LL + ++ + E AAK+ G+D +D + Y++TGE EA+
Sbjct: 423 NYERSSTVGTALLDAYVKLGKVE----EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 512 MQI 514
+++
Sbjct: 479 IKM 481
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 133/253 (52%), Gaps = 12/253 (4%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+ VH + +K + + +G++L+ Y++LG ++ A K+F + ++++ W+ +L G+ +
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGC-SNKRFFDEGSQLHGHVIKVGWVDTNIF 120
G + + ++ E+ ++ N +F ++ C + +G Q HG IK +D+++
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK-SRLDSSLC 531
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
V++AL+ Y+ G + A++ F+ +D++SWNSM+S YA +G + AL++ M+
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591
Query: 181 KKPSIRSFVGFLNLSS-----KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCG 235
K +F+G + + G F + + C I ++ S ++D+Y + G
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH-----NSCMVDLYSRAG 646
Query: 236 DIKNAVSTYESLP 248
++ A+ E++P
Sbjct: 647 QLEKAMKVIENMP 659
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 3/268 (1%)
Query: 135 LSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL 194
L A F P D S+ S+L ++ +G +A L + G + F L +
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 195 SSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC 254
S+ + LFG Q+HC IK GF + V V ++L+D Y K + K+ ++ + ++
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLD-DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 255 CNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCC 314
+L++ + D+V +F M +EG + TF+ H
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAA--ALGVLAEEGVGGRGLQVHTV 219
Query: 315 AIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQC 374
+K G + + VS SLI+ YL+ G+V ++ +F++ + +V + S+I+G+A NGL +
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 375 LEMLEAMIRKGLKPDRVTFLCVLTGCSH 402
L M +M ++ +F V+ C++
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCAN 307
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 267/533 (50%), Gaps = 4/533 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +K GF +L+ + L +Y + ++ A K+FD +PER+L +WN ++ G+ + G+
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGM 216
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
L + + +N++ + ++ ++ S R G ++HG+ ++ G+ D+ + ++
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF-DSLVNIST 275
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
ALVD Y+ CG L A++ F + +V+SWNSM+ Y N +A+ + M G KP
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ S +G L+ + G+ G IH +++G D +V V ++LI MY KC ++ A S
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDR-NVSVVNSLISMYCKCKEVDTAASM 394
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+ L +L N+++ G D F M + D TF+
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD--TFTYVSVITAIAELS 452
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
H ++ + +V V+ +L+D Y + G +++++ +F+ + +V + ++I+
Sbjct: 453 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
G+ +G GK LE+ E M + +KP+ VTFL V++ CSHSGLVE G F M+ + I
Sbjct: 513 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 572
Query: 424 PDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKI 483
DH+ MV Q P + ++ ++L +C++H+N +AA+
Sbjct: 573 LSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAER 632
Query: 484 LLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
L L+P+D H+ ++N Y +E Q++ + + + K G S++ + +
Sbjct: 633 LFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKN 685
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 198/395 (50%), Gaps = 4/395 (1%)
Query: 18 YIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLD 77
+ + LV L+ R G +D A ++F+ + + ++ +L+GF ++ D+ L + ++ D
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 78 NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSE 137
+VE +F YL++ C ++ G ++HG ++K G+ ++F L + Y+ C ++E
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF-SLDLFAMTGLENMYAKCRQVNE 188
Query: 138 AKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSK 197
A+K F +P D++SWN++++ Y+ NG+ ALE++ M KPS + V L S
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 198 TGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNS 257
G +IH ++ GFD+ V++ +AL+DMY KCG ++ A ++ + ++ NS
Sbjct: 249 LRLISVGKEIHGYAMRSGFDS-LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 258 LMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIK 317
++ + + + +F M+DEG+ +V S H +++
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDV--SVMGALHACADLGDLERGRFIHKLSVE 365
Query: 318 LGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEM 377
LG + +VSV SLI Y + V + +F ++ + + ++I GFA NG L
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 378 LEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
M + +KPD T++ V+T + + + +
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/532 (27%), Positives = 268/532 (50%), Gaps = 9/532 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +K GFG +G+SLV Y++ +D A K+FDE+ ER++ +WN ++ G+ GL
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
++ L ++ ++ + +E++ + + GC++ R G +H +K + + F N
Sbjct: 277 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF-CN 335
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
L+D YS CG L AK F+ + V+S+ SM++ YA GL +A++L M+ G P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIK--MGFDNGSVHVQSALIDMYGKCGDIKNAV 241
+ + LN ++ G ++H + + +GFD + V +AL+DMY KCG ++ A
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD---IFVSNALMDMYAKCGSMQEAE 452
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG-IGLDEVTFSTXXXXXXXX 300
+ + + + N+++ ++ +F L+++E DE T +
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
H ++ GY SD V+ SL+D Y + G +LL+ +F+ I ++ +T
Sbjct: 513 SAFDKGREI--HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 570
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLH 420
+I G+ +G GK+ + + M + G++ D ++F+ +L CSHSGLV+EG FN M
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 421 GISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRA 480
I P +H++C+V P D +W +LL CR+H + + +
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 481 AKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
A+ + L+PE+ ++ ++N Y+E ++E ++++ R + K G S I
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 184/402 (45%), Gaps = 5/402 (1%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLY 71
GF + +GS L +Y G + A ++FDE+ WN+++ + G F +GL+
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 72 NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSA 131
++ VE++ +F + + S+ R G QLHG ++K G+ + N V N+LV FY
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN-SVGNSLVAFYLK 242
Query: 132 CGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGF 191
+ A+K F + DV+SWNS+++ Y NGL L + M G + + + V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 192 LNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
+ + G +H +K F + L+DMY KCGD+ +A + + + S
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 252 LECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXX 311
+ S++ G+ + ++F M +EGI D T +
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLG 371
LG+ D+ VS +L+D Y + G + ++ VF ++ + ++ + +II G++ N
Sbjct: 422 WIKENDLGF--DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 479
Query: 372 KQCLEMLEAMI-RKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+ L + ++ K PD T CVL C+ ++GR +
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/525 (28%), Positives = 264/525 (50%), Gaps = 10/525 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +KLG+ N ++G++L+ Y G +D A +F+ + +++ W ++ + E G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
F++ L L + +++ N +F ++ FD +HG ++K +V + V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV-LDPRVGV 286
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
L+ Y+ G +S+A K F +P DV+ W+ M++ + NG +A++L M+ P
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ + LN + + G Q+H V+K+GFD ++V +ALID+Y KC + AV
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD-LDIYVSNALIDVYAKCEKMDTAVKL 405
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+ L + N+++ + G F MF + + + EVTFS+
Sbjct: 406 FAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
H AIK V+VS SLID Y + G + +Q VF ++ +V + ++I+
Sbjct: 466 DLGVQV--HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
G++ +GLG+Q L +L+ M + KP+ +TFL VL+GCS++GL+++G+ F SM HGI
Sbjct: 524 GYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIE 583
Query: 424 PDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKI 483
P +H++CMV P ++W ++L + NE RR+A+
Sbjct: 584 PCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEE 643
Query: 484 LLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIG 528
+L ++P+D A ++ VSN Y+ + Q +A RK KE+G
Sbjct: 644 ILKINPKDEATYVLVSNMYA------GAKQWANVASIRKSMKEMG 682
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 191/400 (47%), Gaps = 10/400 (2%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGF-CEL 61
++HC +K G +L+ + L+ Y++ G AL LFDE+PERN ++ + +G+ C+
Sbjct: 70 AIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ- 128
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
+ +GLY+ + + ELN F ++ + + LH ++K+G+ D+N FV
Sbjct: 129 ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGY-DSNAFV 183
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
AL++ YS CG + A+ F+ I +D++ W ++S Y +NG F D+L+LL M+ G
Sbjct: 184 GAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF 243
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
P+ +F L S G F +H ++K + V L+ +Y + GD+ +A
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP-RVGVGLLQLYTQLGDMSDAF 302
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
+ +P + + ++ G ++ ++F M + + +E T S+
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS--ILNGCAI 360
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
H +K+G++ D+ VS +LID Y + + + K+F ++ N + ++
Sbjct: 361 GKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
I G+ G G + M +R + VTF L C+
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/537 (26%), Positives = 262/537 (48%), Gaps = 8/537 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H ++ G + + + L+ Y++ G + A KLF+ +P +N+ +W +L G+ +
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
L E + L+ + ++ + + ++ C++ G+Q+H + IK + + +V
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN-LGNDSYV 387
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGL---FLDALELLYIMQF 178
N+L+D Y+ C CL++A+K F DV+ +N+M+ Y+ G +AL + M+F
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
+PS+ +FV L S+ + QIH + K G N + SALID+Y C +K
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL-NLDIFAGSALIDVYSNCYCLK 506
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
++ ++ + + L NS+ + ++ +F + DE TF+
Sbjct: 507 DSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCF 358
HC +K G E + ++ +L+D Y + G + K F+ +V C+
Sbjct: 567 NLASVQLGQEF--HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCW 624
Query: 359 TSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES 418
S+I+ +A +G GK+ L+MLE M+ +G++P+ +TF+ VL+ CSH+GLVE+G F M
Sbjct: 625 NSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR 684
Query: 419 LHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGR 478
GI P+ +H+ CMV + P + ++W SLL C N +
Sbjct: 685 F-GIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAE 743
Query: 479 RAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
AA++ + DP+D +SN Y+ G + + +++E + KE G S IG+N
Sbjct: 744 HAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGIN 800
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 187/403 (46%), Gaps = 3/403 (0%)
Query: 9 IKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELL 68
+K GF ++Y+G+ L+ Y++ G ID A +FD LPE++ TW ++ G ++G L
Sbjct: 175 VKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSL 234
Query: 69 GLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDF 128
L+ ++ DNV +G ++ CS F + G Q+H H+++ G ++ + + N L+D
Sbjct: 235 QLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG-LEMDASLMNVLIDS 293
Query: 129 YSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSF 188
Y CG + A K F +P ++++SW ++LS Y N L +A+EL M +G KP + +
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYAC 353
Query: 189 VGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
L + FG Q+H IK N S +V ++LIDMY KC + +A ++
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDS-YVTNSLIDMYAKCDCLTDARKVFDIFA 412
Query: 249 MTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXX-X 307
+ N+++ G ++ E + D L + T
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 308 XXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAW 367
H K G D+ +LID Y + S+ VF+++ + ++ + S+ G+
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ 532
Query: 368 NGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
++ L + + +PD TF ++T + V+ G+
Sbjct: 533 QSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQ 575
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 183/409 (44%), Gaps = 14/409 (3%)
Query: 1 RNSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE 60
+N VH + I G + Y+ + L+ LY R G + A K+F+++PERNL +W+ ++
Sbjct: 63 QNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNH 122
Query: 61 LGLFDELLGLYNEI-KLDNVELNGLSFCYLIRGCS--NKRFFDEGSQLHGHVIKVGWVDT 117
G+++E L ++ E + N I+ CS + R QL ++K G+ D
Sbjct: 123 HGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF-DR 181
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
+++V L+DFY G + A+ F A+P + ++W +M+S G +L+L Y +
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
P L+ S G QIH +++ G + + + + LID Y KCG +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA-SLMNVLIDSYVKCGRV 300
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXX 297
A + +P ++ +L++ + + E+F M G+ D ++
Sbjct: 301 IAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD--MYACSSILT 358
Query: 298 XXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC 357
H IK +D V+ SLID Y + + ++KVF+ +V
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 418
Query: 358 FTSIINGFAWNGLGKQ-----CLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
F ++I G++ LG Q L + M + ++P +TF+ +L +
Sbjct: 419 FNAMIEGYS--RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 99/228 (43%), Gaps = 2/228 (0%)
Query: 186 RSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYE 245
R F L L + + +H +I G + + ++ + LI++Y + G + A +E
Sbjct: 45 REFARLLQLRASDDLLHYQNVVHGQIIVWGLELDT-YLSNILINLYSRAGGMVYARKVFE 103
Query: 246 SLPMTSLECCNSLMTSLLHCGIVDDVFEMF-GLMVDEGIGLDEVTFSTXXXXXXXXXXXX 304
+P +L ++++++ H GI ++ +F +E S+
Sbjct: 104 KMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRG 163
Query: 305 XXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIING 364
+K G++ DV V LID YL+ G++ ++ VF+ +P + +T++I+G
Sbjct: 164 RWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG 223
Query: 365 FAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
G L++ ++ + PD VL+ CS +E G+ +
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI 271
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 266/539 (49%), Gaps = 20/539 (3%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VHC A+KLG L + +SL+ +Y +L A +FD + ER+L +WN V+ G +
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEG----SQLHGHVIKVGWVDT 117
GL E + L+ ++ ++ + + +++ S+ EG Q+H H IK+ V +
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNV-S 450
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
+ FV+ AL+D YS C+ EA+ F+ D+++WN+M++ Y + L+L +M
Sbjct: 451 DSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALF----GMQIHCCVIKMGFDNGSVHVQSALIDMYGK 233
G++ + KT LF G Q+H IK G+D + V S ++DMY K
Sbjct: 510 KQGERSDDFTLATVF----KTCGFLFAINQGKQVHAYAIKSGYD-LDLWVSSGILDMYVK 564
Query: 234 CGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTX 293
CGD+ A ++S+P+ ++++ + G + F +F M G+ DE T +T
Sbjct: 565 CGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATL 624
Query: 294 XXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP 353
H A+KL +D V SL+D Y + G + + +F++I +
Sbjct: 625 AKASSCLTALEQGRQI--HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM 682
Query: 354 NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVF 413
N+ + +++ G A +G GK+ L++ + M G+KPD+VTF+ VL+ CSHSGLV E
Sbjct: 683 NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHM 742
Query: 414 NSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRN 473
SM +GI P+ +H+SC+ M+ +LL +CRV +
Sbjct: 743 RSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGD 802
Query: 474 ETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
G+R A LL L+P D + ++ +SN Y+ +++ + + K+ K+ G S I
Sbjct: 803 TETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 41/403 (10%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGF----- 58
H R + ++ ++L+ +Y + G + A ++FD++P+R+L +WN +L +
Sbjct: 61 THARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSE 120
Query: 59 CELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
C + + L+ ++ D V + ++ +++ C + + HG+ K+G +D +
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG-LDGD 179
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
FVA ALV+ Y G + E K F+ +P DV+ WN ML Y + G +A++L
Sbjct: 180 EFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS 239
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
G P+ + +S +A G +K
Sbjct: 240 SGLNPNEITLRLLARISGDDSDA---------------------------------GQVK 266
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
+ + ++ ++ + N ++ LH G + + F MV+ + D+VTF
Sbjct: 267 SFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTF--ILMLAT 324
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCF 358
HC A+KLG + ++VS SLI+ Y + ++ VF+ + ++ +
Sbjct: 325 AVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISW 384
Query: 359 TSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
S+I G A NGL + + + ++R GLKPD+ T VL S
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 172/410 (41%), Gaps = 36/410 (8%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
S H A K+G + ++ +LV +Y++ G + LF+E+P R++ WNL+L+ + E+G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+E + L + + N ++ L R +
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLRLLARISGDD-------------------------- 259
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
S G + A + +++ N LS Y +G + L+ M +
Sbjct: 260 -------SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVE 312
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
+F+ L + K + G Q+HC +K+G D + V ++LI+MY K A +
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLD-LMLTVSNSLINMYCKLRKFGFART 371
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
++++ L NS++ + G+ + +F ++ G+ D+ T T
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM-TSVLKAASSLP 430
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H AIK+ SD VS +LIDAY R+ + ++ +FE+ ++ + +++
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMM 489
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
G+ + G + L++ M ++G + D T V C + +G+ V
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 94/211 (44%), Gaps = 8/211 (3%)
Query: 188 FVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESL 247
+ GFL + + + + G H ++ +N + + LI MY KCG + A ++ +
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFE-ENPERFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 248 PMTSLECCNSLMTSLLHCG--IVDDV---FEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
P L NS++ + +V+++ F +F ++ + + +T S
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
+ C K+G + D V+ +L++ YL+ G V + +FE++P +V + ++
Sbjct: 161 VWASESFHGYAC--KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLML 218
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTF 393
+ G ++ +++ A GL P+ +T
Sbjct: 219 KAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 248/503 (49%), Gaps = 18/503 (3%)
Query: 33 IDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRG 92
+ A +F+ + ++ WN ++RG+ D+ L Y E+ + +F Y+++
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 93 CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLS 152
CS R GS +HG V+K G+ + N++V+ L+ Y CG ++ + F+ IP +V++
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGF-EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 153 WNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVI 212
W S++S + +N F DA+E MQ G K + V L + + F
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDPYFQS------- 228
Query: 213 KMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVF 272
K+GF+ V + ++LIDMY KCGD++ A ++ +P +L NS++T G ++
Sbjct: 229 KVGFN---VILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEAL 285
Query: 273 EMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLID 332
MF M+D GI D+VTF + H K G+ D ++ C+L++
Sbjct: 286 CMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSI--HAYVSKTGFVKDAAIVCALVN 343
Query: 333 AYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKG-LKPDRV 391
Y ++G ++K FE + + +T +I G A +G G + L + + M KG PD +
Sbjct: 344 MYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGI 403
Query: 392 TFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQ 451
T+L VL CSH GLVEEG+ F M LHG+ P +H+ CMV
Sbjct: 404 TYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKT 463
Query: 452 TPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDF--AVHLQVSNFYSETGEFE 509
P + + +W +LL C +H N + R ++ +PE+ +++ +SN Y++ G +
Sbjct: 464 MPVKPNVNIWGALLNGCDIHENLELTDRIRSMV--AEPEELGSGIYVLLSNIYAKAGRWA 521
Query: 510 ASMQIKEIAIARKMTKEIGHSLI 532
I+E ++++ K +GHS +
Sbjct: 522 DVKLIRESMKSKRVDKVLGHSSV 544
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 169/368 (45%), Gaps = 24/368 (6%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH +K GF N+Y+ + L+ +YM G ++ L++F+++P+ N+ W ++ GF
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
F + + + E++ + V+ N L+ C R FD Q KVG+ N+ +A
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACG--RCFDPYFQ-----SKVGF---NVILAT 238
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+L+D Y+ CG L A+ F +P ++SWNS+++ Y+ NG +AL + M G P
Sbjct: 239 SLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAP 298
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+F+ + S G + G IH V K GF + V AL++MY K GD ++A
Sbjct: 299 DKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV-CALVNMYAKTGDAESAKKA 357
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDE------VTFSTXXXXX 297
+E L ++ L G ++ +F M ++G + V ++
Sbjct: 358 FEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGL 417
Query: 298 XXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL-PNVF 356
H G E V ++D R+G ++++ + +P+ PNV
Sbjct: 418 VEEGQRYFAEMRDLH------GLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVN 471
Query: 357 CFTSIING 364
+ +++NG
Sbjct: 472 IWGALLNG 479
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
S+H K GF + I +LV +Y + G + A K F++L +++ W +V+ G
Sbjct: 320 QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 379
Query: 62 GLFDELLGLYNEIKLD-NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
G +E L ++ ++ N +G+++ ++ CS+ +EG + + + ++ +
Sbjct: 380 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVE 439
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLS 158
+VD S G EA++ + +P++ +V W ++L+
Sbjct: 440 HYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLN 478
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 82/204 (40%), Gaps = 11/204 (5%)
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN---AVSTYESLPMTSLECCN 256
N L G+ I VI+ +V S LID C + N A S +ES+ S+ N
Sbjct: 23 NQLHGLMIKSSVIR------NVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWN 76
Query: 257 SLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAI 316
S++ + D + M+ +G D TF H +
Sbjct: 77 SMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFP--YVLKACSGLRDIQFGSCVHGFVV 134
Query: 317 KLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLE 376
K G+E ++ VS L+ Y+ G V +VFE IP NV + S+I+GF N +E
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 377 MLEAMIRKGLKPDRVTFLCVLTGC 400
M G+K + + +L C
Sbjct: 195 AFREMQSNGVKANETIMVDLLVAC 218
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 261/564 (46%), Gaps = 70/564 (12%)
Query: 36 ALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSN 95
A KLF P +N +WN ++ G+C+ G E L+ E++ D ++ N + ++R C++
Sbjct: 78 AEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTS 137
Query: 96 KRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME-DVLSWN 154
G Q+HGH IK G+ D ++ V N L+ Y+ C +SEA+ F+ + E + ++W
Sbjct: 138 LVLLLRGEQIHGHTIKTGF-DLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWT 196
Query: 155 SMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKM 214
SML+ Y+ NG A+E ++ G + + +F L + G+Q+HCC++K
Sbjct: 197 SMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 215 GFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEM 274
GF +++VQSALIDMY KC ++++A + E + + + NS++ + G++ + M
Sbjct: 257 GFKT-NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSM 315
Query: 275 FGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAY 334
FG M + + +D+ T + HC +K GY + V+ +L+D Y
Sbjct: 316 FGRMHERDMKIDDFTIPS-ILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMY 374
Query: 335 LRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFL 394
+ G + + KVFE + +V +T+++ G NG + L++ M G+ PD++
Sbjct: 375 AKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTA 434
Query: 395 CVLTGCSH-----------------------------------SGLVEEGRLVFNSME-- 417
VL+ + G +E+ ++FNSME
Sbjct: 435 SVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR 494
Query: 418 -----------------------------SLHGISPDRDHFSCMVXXXXXXXXXXXXXXX 448
+++GI+P +H++CM+
Sbjct: 495 DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQL 554
Query: 449 XXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEF 508
Q D +W ++L + R H N G RAAK L+ L+P + ++Q+SN YS G
Sbjct: 555 LHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQ 614
Query: 509 EASMQIKEIAIARKMTKEIGHSLI 532
+ + ++ + +R ++KE G S +
Sbjct: 615 DEAANVRRLMKSRNISKEPGCSWV 638
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 140/280 (50%), Gaps = 11/280 (3%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VHC +K GF N+Y+ S+L+ +Y + ++ A L + + ++ +WN ++ G GL
Sbjct: 249 VHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGL 308
Query: 64 FDELLGLY-----NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
E L ++ ++K+D+ + + C+ + K S H ++K G+ T
Sbjct: 309 IGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKI----ASSAHCLIVKTGYA-TY 363
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
V NALVD Y+ G + A K F+ + +DV+SW ++++ NG + +AL+L M+
Sbjct: 364 KLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRV 423
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
G P L+ S++ FG Q+H IK GF + S+ V ++L+ MY KCG ++
Sbjct: 424 GGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPS-SLSVNNSLVTMYTKCGSLE 482
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLM 278
+A + S+ + L L+ G+++D F M
Sbjct: 483 DANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 4/279 (1%)
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
F N ++ YS LS+A+K F++ P+++ +SWN+++S Y +G ++A L + MQ
Sbjct: 60 FTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD 119
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
G KP+ + L + + L G QIH IK GFD V+V + L+ MY +C I
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFD-LDVNVVNGLLAMYAQCKRISE 178
Query: 240 AVSTYESLPMTSLECC-NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
A +E++ S++T G E F + EG ++ TF +
Sbjct: 179 AEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPS--VLTA 236
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCF 358
HCC +K G+++++ V +LID Y + + ++ + E + + +V +
Sbjct: 237 CASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSW 296
Query: 359 TSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVL 397
S+I G GL + L M M + +K D T +L
Sbjct: 297 NSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 130/247 (52%), Gaps = 6/247 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+S HC +K G+ + ++LV +Y + G++D ALK+F+ + E+++ +W ++ G
Sbjct: 349 SSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHN 408
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G +DE L L+ +++ + + + ++ + + G Q+HG+ IK G+ +++ V
Sbjct: 409 GSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGF-PSSLSV 467
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ-FWG 180
N+LV Y+ CG L +A F ++ + D+++W ++ YA NGL DA M+ +G
Sbjct: 468 NNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYG 527
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
P + ++L ++G+ + ++ + +M + + V A++ K G+I+N
Sbjct: 528 ITPGPEHYACMIDLFGRSGDFV---KVEQLLHQMEVEPDAT-VWKAILAASRKHGNIENG 583
Query: 241 VSTYESL 247
++L
Sbjct: 584 ERAAKTL 590
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/566 (26%), Positives = 271/566 (47%), Gaps = 34/566 (6%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVG---LYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE 60
+H + IK+G Y S L+ L + A+ +F + E NL WN + RG
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVG-----WV 115
L LY + + N +F ++++ C+ + F EG Q+HGHV+K+G +V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 116 DTNI---FVAN----------------------ALVDFYSACGCLSEAKKSFQAIPMEDV 150
T++ +V N AL+ Y++ G + A+K F IP++DV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 151 LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCC 210
+SWN+M+S YA+ G + +ALEL M +P + V ++ +++G+ G Q+H
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 211 VIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDD 270
+ GF ++ + +ALID+Y KCG+++ A +E LP + N+L+ H + +
Sbjct: 292 IDDHGF-GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKE 350
Query: 271 VFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSL 330
+F M+ G ++VT + + G + S+ SL
Sbjct: 351 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 410
Query: 331 IDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDR 390
ID Y + G + + +VF I ++ + ++I GFA +G ++ M + G++PD
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 391 VTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXX 450
+TF+ +L+ CSHSG+++ GR +F +M + ++P +H+ CM+
Sbjct: 471 ITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN 530
Query: 451 QTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEA 510
D V+W SLL++C++H N +G A+ L+ ++PE+ ++ +SN Y+ G +
Sbjct: 531 MMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNE 590
Query: 511 SMQIKEIAIARKMTKEIGHSLIGLNS 536
+ + + + M K G S I ++S
Sbjct: 591 VAKTRALLNDKGMKKVPGCSSIEIDS 616
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/538 (28%), Positives = 255/538 (47%), Gaps = 18/538 (3%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H KLGF N I +L+ LY + I+ AL F E N+ WN++L +
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY--- 465
Query: 62 GLFDEL---LGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
GL D+L ++ +++++ + N ++ +++ C + G Q+H +IK + N
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF-QLN 524
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
+V + L+D Y+ G L A +DV+SW +M++ Y AL M
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Query: 179 WGKKPSIRS-FVGFLNLSSKTG--NALF-GMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
G IRS VG N S AL G QIH GF + + Q+AL+ +Y +C
Sbjct: 585 RG----IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF-SSDLPFQNALVTLYSRC 639
Query: 235 GDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXX 294
G I+ + +E N+L++ G ++ +F M EGI + TF +
Sbjct: 640 GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAV 699
Query: 295 XXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPN 354
H K GY+S+ V +LI Y + G + ++K F ++ N
Sbjct: 700 KAASETANMKQGKQV--HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN 757
Query: 355 VFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFN 414
+ +IIN ++ +G G + L+ + MI ++P+ VT + VL+ CSH GLV++G F
Sbjct: 758 EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 817
Query: 415 SMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNE 474
SM S +G+SP +H+ C+V + P + D ++W +LL +C VH+N
Sbjct: 818 SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 877
Query: 475 TVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+G AA LL L+PED A ++ +SN Y+ + +++A ++ + + KE G S I
Sbjct: 878 EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 178/410 (43%), Gaps = 4/410 (0%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+H +KLGF + Y+ ++LV LY LG + A +F + +R+ T+N ++ G + G
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
++ + L+ + LD +E + + L+ CS G QLH + K+G+ N +
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK-IE 427
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
AL++ Y+ C + A F +E+V+ WN ML Y ++ + MQ
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+ ++ L + G+ G QIH +IK F + +V S LIDMY K G + A
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF-QLNAYVCSVLIDMYAKLGKLDTAWD 546
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+ +++ D F M+D GI DEV +
Sbjct: 547 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
C G+ SD+ +L+ Y R G + S FEQ + + +++
Sbjct: 607 LKEGQQIHAQACVS--GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+GF +G ++ L + M R+G+ + TF + S + +++G+ V
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 189/414 (45%), Gaps = 5/414 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + +KLG N + L Y+ G + A K+FDE+PER + TWN +++ L
Sbjct: 107 LHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNL 166
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRF-FDEGSQLHGHVIKVGWVDTNIFVA 122
E+ GL+ + +NV N +F ++ C FD Q+H ++ G D+ + V
Sbjct: 167 IGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV-VC 225
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
N L+D YS G + A++ F + ++D SW +M+S + N +A+ L M G
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+ +F L+ K + G Q+H V+K+GF + + +V +AL+ +Y G++ +A
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT-YVCNALVSLYFHLGNLISAEH 344
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+ ++ N+L+ L CG + E+F M +G+ D T ++
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS--LVVACSAD 402
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H KLG+ S+ + +L++ Y + + + F + + NV + ++
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
+ + + M + + P++ T+ +L C G +E G + + +
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 13/348 (3%)
Query: 71 YNEIKLDNVELNGL-----SFCYLIRGC-SNKRFFDEGSQLHGHVIKVGWVDTNIFVANA 124
+ E ++D+VE G+ + +L+ GC DEG +LH ++K+G +D+N ++
Sbjct: 67 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLG-LDSNGCLSEK 125
Query: 125 LVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPS 184
L DFY G L A K F +P + +WN M+ A L + L M P+
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 185 IRSFVGFLNLSSKTGNALFGM--QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
+F G L + + G+ F + QIH ++ G + +V V + LID+Y + G + A
Sbjct: 186 EGTFSGVLE-ACRGGSVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRNGFVDLARR 243
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
++ L + ++++ L + +F M GI FS+
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS--VLSACKKI 301
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H +KLG+ SD V +L+ Y G+++ ++ +F + + + ++I
Sbjct: 302 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
NG + G G++ +E+ + M GL+PD T ++ CS G + G+
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/537 (26%), Positives = 266/537 (49%), Gaps = 12/537 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + G +++ + L+ +Y + G +D A+ LFD ER+ +WN ++ G+ +G
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCS---NKRFFDEGSQLHGHVIKVGWVDTNIF 120
+E L L ++ D + L + +++ C N+ F ++G +H + K+G ++ +I
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLG-MEFDIV 288
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLD-----ALELLYI 175
V AL+D Y+ G L EA K F +P ++V+++N+M+S + D A +L
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMD 348
Query: 176 MQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCG 235
MQ G +PS +F L S +G QIH + K F + + SALI++Y G
Sbjct: 349 MQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF-IGSALIELYALMG 407
Query: 236 DIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXX 295
++ + + S + S++ + ++ F++F + I +E T S
Sbjct: 408 STEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMS 467
Query: 296 XXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNV 355
+ AIK G ++ SV S I Y +SG++ L+ +VF ++ P+V
Sbjct: 468 ACADFAALSSGEQIQGY--AIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDV 525
Query: 356 FCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNS 415
++++I+ A +G + L + E+M G+KP++ FL VL C H GLV +G F
Sbjct: 526 ATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQC 585
Query: 416 MESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNET 475
M++ + I+P+ HF+C+V + + V W +LL SCRV+++
Sbjct: 586 MKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSV 645
Query: 476 VGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+G+R A+ L+ L+PE ++ + N Y+++G ++ +++E+ R + KE S I
Sbjct: 646 IGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWI 702
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 178/395 (45%), Gaps = 12/395 (3%)
Query: 26 LYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLS 85
+Y + + A +LFD +PERN+ ++N ++ G+ ++G +++ + L+ E + N++L+ +
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 86 FCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAI 145
+ + C + D G LHG V+ V + +F+ N L+D YS CG L +A F
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVV-VNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 146 PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF-- 203
D +SWNS++S Y G + L LL M G + + L N F
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 204 -GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSL 262
GM IHC K+G + V V++AL+DMY K G +K A+ + +P ++ N++++
Sbjct: 270 KGMAIHCYTAKLGMEFDIV-VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF 328
Query: 263 LHCGIVDD-----VFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIK 317
L + D F++F M G+ TFS H K
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSV--VLKACSAAKTLEYGRQIHALICK 386
Query: 318 LGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEM 377
++SD + +LI+ Y G + F ++ +TS+I+ N + ++
Sbjct: 387 NNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDL 446
Query: 378 LEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+ ++P+ T +++ C+ + G +
Sbjct: 447 FRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 140/293 (47%), Gaps = 7/293 (2%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
++HC KLG F++ + ++L+ +Y + G + A+KLF +P +N+ T+N ++ GF ++
Sbjct: 273 AIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMD 332
Query: 63 LF-----DELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDT 117
E L+ +++ +E + +F +++ CS + + G Q+H + K + +
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF-QS 391
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
+ F+ +AL++ Y+ G + + F + +D+ SW SM+ + N A +L +
Sbjct: 392 DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
+P + ++ + G QI IK G D V+++ I MY K G++
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGID-AFTSVKTSSISMYAKSGNM 510
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
A + + + +++++SL G ++ +F M GI ++ F
Sbjct: 511 PLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAF 563
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 262/530 (49%), Gaps = 6/530 (1%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLF 64
H IK NL++G++LV +Y + G ++ A ++F+ + +R+ TWN ++ + +
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 65 DELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANA 124
E L+ + L + +G ++ C++ +G Q+H +K G +D ++ ++
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG-LDRDLHTGSS 569
Query: 125 LVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPS 184
L+D YS CG + +A+K F ++P V+S N++++ Y+ N L +A+ L M G PS
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPS 628
Query: 185 IRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTY 244
+F + K + G Q H + K GF + ++ +L+ MY + A + +
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 245 ESLPM-TSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
L S+ +M+ G ++ + + M +G+ D+ TF T
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL 748
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL-PNVFCFTSII 362
H L ++ D S +LID Y + G + S +VF+++ NV + S+I
Sbjct: 749 REGRAI--HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
NG+A NG + L++ ++M + + PD +TFL VLT CSH+G V +GR +F M +GI
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI 866
Query: 423 SPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAK 482
DH +CMV + D +WSSLL +CR+H ++ G +A+
Sbjct: 867 EARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAE 926
Query: 483 ILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
L+ L+P++ + ++ +SN Y+ G +E + ++++ R + K G+S I
Sbjct: 927 KLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWI 976
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 206/411 (50%), Gaps = 7/411 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH AIKLG N+Y+GSSLV +Y + ++ A K+F+ L E+N WN ++RG+ G
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+++ L+ ++K ++ +F L+ C+ + GSQ H +IK + N+FV N
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK-LAKNLFVGN 467
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
ALVD Y+ CG L +A++ F+ + D ++WN+++ Y + +A +L M G
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS 527
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
L + G Q+HC +K G D +H S+LIDMY KCG IK+A
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR-DLHTGSSLIDMYSKCGIIKDARKV 586
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+ SLP S+ N+L+ + + V +F M+ G+ E+TF+T
Sbjct: 587 FSSLPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTRGVNPSEITFAT--IVEACHKPE 643
Query: 304 XXXXXXXXHCCAIKLGYESDVS-VSCSLIDAYLRSGHVLLSQKVFEQIPLP-NVFCFTSI 361
H K G+ S+ + SL+ Y+ S + + +F ++ P ++ +T +
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
++G + NG ++ L+ + M G+ PD+ TF+ VL CS + EGR +
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 186/413 (45%), Gaps = 50/413 (12%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+VH +++ LG +G+++V LY + + A K FD L E+++ WN +L + +
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSI 138
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G ++L + + + + N +F ++ C+ + + G Q+H +IK+G ++ N +
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG-LERNSYC 197
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
ALVD Y+ C +S+A++ F+ I + + W + S Y GL +A+ + M+ G
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 182 KPSIRSFVGFLNLSSKTGN-----ALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGD 236
+P +FV +N + G LFG + V + +I +GK G
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFG----------EMSSPDVVAWNVMISGHGKRGC 307
Query: 237 IKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX 296
A+ + ++ +S++ S + S+L G++ + +GL
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSA---------IGIVANLDLGL----------- 347
Query: 297 XXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVF 356
H AIKLG S++ V SL+ Y + + + KVFE + N
Sbjct: 348 -------------VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV 394
Query: 357 CFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
+ ++I G+A NG + +E+ M G D TF +L+ C+ S +E G
Sbjct: 395 FWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 174/409 (42%), Gaps = 39/409 (9%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC IK+G N Y G +LV +Y + I A ++F+ + + N W + G+ + GL
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+E + ++ +R DEG + D FV
Sbjct: 242 PEEAVLVF------------------------ERMRDEGHR----------PDHLAFV-- 265
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+++ Y G L +A+ F + DV++WN M+S + G A+E + M+ K
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ + L+ N G+ +H IK+G + +++V S+L+ MY KC ++ A
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS-NIYVGSSLVSMYSKCEKMEAAAKV 384
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+E+L + N+++ H G V E+F M G +D+ TF++
Sbjct: 385 FEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS--LLSTCAASH 442
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
H IK ++ V +L+D Y + G + ++++FE++ + + +II
Sbjct: 443 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIG 502
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+ + + ++ + M G+ D L C+H + +G+ V
Sbjct: 503 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 9/230 (3%)
Query: 204 GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLL 263
G +H + +G D+ + +A++D+Y KC + A ++ L + NS+++
Sbjct: 79 GKAVHSKSLILGIDSEG-RLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYS 136
Query: 264 HCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESD 323
G V F + + I ++ TFS HC IK+G E +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQI--HCSMIKMGLERN 194
Query: 324 VSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIR 383
+L+D Y + + +++VFE I PN C+T + +G+ GL ++ + + E M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 384 KGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
+G +PD + F+ V+ G +++ RL+F M SPD ++ M+
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMI 299
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPER-NLATWNLVLRGFCEL 61
++H L + ++L+ +Y + G + + ++FDE+ R N+ +WN ++ G+ +
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G ++ L +++ ++ ++ + ++F ++ CS+ +G ++ +I ++ +
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDH 872
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSML 157
+VD G L EA +A ++ D W+S+L
Sbjct: 873 VACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLL 909
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 146/538 (27%), Positives = 271/538 (50%), Gaps = 10/538 (1%)
Query: 4 VHCRAIKLGF-GFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
VH I G F + IG+ LV +Y + G I A ++F + +++ +WN ++ G + G
Sbjct: 335 VHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNG 394
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
F E + Y ++ ++ + + C++ ++ G Q+HG +K+G +D N+ V+
Sbjct: 395 CFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG-IDLNVSVS 453
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFL-DALELLYIMQFWGK 181
NAL+ Y+ G L+E +K F ++P D +SWNS++ A + L +A+ Q G+
Sbjct: 454 NALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ 513
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
K + +F L+ S G QIH +K + + ++ALI YGKCG++
Sbjct: 514 KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT-TENALIACYGKCGEMDGCE 572
Query: 242 STYESLPMTSLECC-NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXX 300
+ + NS+++ +H ++ ++ M+ G LD ++T
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASV 632
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
H C+++ ESDV V +L+D Y + G + + + F +P+ N + + S
Sbjct: 633 ATLERGMEV--HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNS 690
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKG-LKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESL 419
+I+G+A +G G++ L++ E M G PD VTF+ VL+ CSH+GL+EEG F SM
Sbjct: 691 MISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDS 750
Query: 420 HGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRS-CRVH-RNETVG 477
+G++P +HFSCM + P + + ++W ++L + CR + R +G
Sbjct: 751 YGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELG 810
Query: 478 RRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
++AA++L L+PE+ ++ + N Y+ G +E ++ ++ + KE G+S + +
Sbjct: 811 KKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMK 868
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 192/413 (46%), Gaps = 11/413 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+ C K G +L++GS LV + + G + A K+F+++ RN T N ++ G
Sbjct: 230 IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKW 289
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDE-----GSQLHGHVIKVGWVDTN 118
+E L+ ++ ++++ S+ L+ +E G ++HGHVI G VD
Sbjct: 290 GEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM 348
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
+ + N LV+ Y+ CG +++A++ F + +D +SWNSM++ NG F++A+E M+
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
P + + L+ + A G QIH +K+G D +V V +AL+ +Y + G +
Sbjct: 409 HDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL-NVSVSNALMTLYAETGYLN 467
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHC-GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXX 297
+ S+P NS++ +L + + F G L+ +TFS+
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSS--VLS 525
Query: 298 XXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP-LPNVF 356
H A+K + + +LI Y + G + +K+F ++ +
Sbjct: 526 AVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 357 CFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
+ S+I+G+ N L + L+++ M++ G + D + VL+ + +E G
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG 638
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 174/408 (42%), Gaps = 16/408 (3%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLF 64
H R K ++Y+ ++L+ Y+ G A K+FDE+P RN +W ++ G+ G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 65 DELLGLYNEIKLDNVELNGLSFCYLIRGC----SNKRFFDEGSQLHGHVIKVGWVDTNIF 120
E L ++ + + N +F ++R C S F G Q+HG + K+ + +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF--GRQIHGLMFKLSYA-VDAV 140
Query: 121 VANALVDFYSAC-GCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
V+N L+ Y C G + A +F I +++ +SWNS++SVY+ G A + MQ+
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 180 GKKPSIRSFVGFLNL--SSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
G +P+ +F + S + QI C + K G + V S L+ + K G +
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT-DLFVGSGLVSAFAKSGSL 259
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMF---GLMVDEGIGLDEVTFSTXX 294
A + + + N LM L+ ++ ++F M+D V +
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE-SYVILLSSF 318
Query: 295 XXXXXXXXXXXXXXXXXHCCAIKLG-YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP 353
H I G + V + L++ Y + G + +++VF +
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 354 NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
+ + S+I G NG + +E ++M R + P T + L+ C+
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 149/336 (44%), Gaps = 20/336 (5%)
Query: 79 VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA 138
V L+ + C RG + RFF H + K +D ++++ N L++ Y G A
Sbjct: 5 VPLSFVQSCVGHRGAA--RFF------HSRLYK-NRLDKDVYLCNNLINAYLETGDSVSA 55
Query: 139 KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKT 198
+K F +P+ + +SW ++S Y+ NG +AL L M G + +FV L +
Sbjct: 56 RKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEI 115
Query: 199 GNA--LFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC-GDIKNAVSTYESLPMTSLECC 255
G+ LFG QIH + K+ + +V V + LI MY KC G + A+ + + + +
Sbjct: 116 GSVGILFGRQIHGLMFKLSYAVDAV-VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
NS+++ G F +F M +G E TF + C
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCL 375
K G +D+ V L+ A+ +SG + ++KVF Q+ N ++ G G++
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 376 EM---LEAMIRKGLKPDRVTFLCVLTGCSHSGLVEE 408
++ + +MI + P+ +++ +L+ L EE
Sbjct: 295 KLFMDMNSMI--DVSPE--SYVILLSSFPEYSLAEE 326
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/537 (27%), Positives = 262/537 (48%), Gaps = 6/537 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
H +K+ ++Y+ +SLVG+Y + GL++ LK+F +PERN TW+ ++ G+ G
Sbjct: 140 AHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGR 199
Query: 64 FDELLGLYNEIKLDNVELNGLSFCY--LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
+E + ++N + E + + + ++ + + G Q+H IK G + + +
Sbjct: 200 VEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF-VAL 258
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
+NALV YS C L+EA K F + + ++W++M++ Y+ NG L+A++L M G
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
KPS + VG LN S G Q+H ++K+GF+ + +AL+DMY K G + +A
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFER-HLFATTALVDMYAKAGCLADAR 377
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
++ L + SL++ + ++ ++ M GI ++ T ++
Sbjct: 378 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLA 437
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
H IK G+ +V + +L Y + G + VF + P +V + ++
Sbjct: 438 TLELGKQVHGH--TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAM 495
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
I+G + NG G + LE+ E M+ +G++PD VTF+ +++ CSH G VE G FN M G
Sbjct: 496 ISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIG 555
Query: 422 ISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAA 481
+ P DH++CMV +W LL +C+ H +G A
Sbjct: 556 LDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAG 615
Query: 482 KILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNSCY 538
+ L+ L + + ++Q+S Y+ G ++ + A ++KE+G S I L + Y
Sbjct: 616 EKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQY 672
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 153/320 (47%), Gaps = 5/320 (1%)
Query: 94 SNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSW 153
S +R G +HG +I+ G T I AN LV+FY+ CG L++A F AI +DV+SW
Sbjct: 25 SQQRNLVAGRAVHGQIIRTG-ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSW 83
Query: 154 NSMLSVYADNGLFLDA---LELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCC 210
NS+++ Y+ NG + ++L M+ P+ + G S ++ G Q H
Sbjct: 84 NSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHAL 143
Query: 211 VIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDD 270
V+KM G ++V ++L+ MY K G +++ + + +P + +++++ G V++
Sbjct: 144 VVKMS-SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 271 VFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSL 330
++F L + E + + HC IK G V++S +L
Sbjct: 203 AIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNAL 262
Query: 331 IDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDR 390
+ Y + + + K+F+ N +++++ G++ NG + +++ M G+KP
Sbjct: 263 VTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 391 VTFLCVLTGCSHSGLVEEGR 410
T + VL CS +EEG+
Sbjct: 323 YTIVGVLNACSDICYLEEGK 342
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 191/415 (46%), Gaps = 9/415 (2%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+VH + I+ G + + LV Y + G + A +F+ + +++ +WN ++ G+ + G
Sbjct: 35 AVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNG 94
Query: 63 LFDE---LLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNI 119
++ L+ E++ ++ N + + + S+ + G Q H V+K+ +I
Sbjct: 95 GISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG-DI 153
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
+V +LV Y G + + K F +P + +W++M+S YA G +A+++ +
Sbjct: 154 YVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE 213
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGM--QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
++ S +V LSS G+ QIHC IK G G V + +AL+ MY KC +
Sbjct: 214 KEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL-LGFVALSNALVTMYSKCESL 272
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXX 297
A ++S + ++++T G + ++F M GI E ++
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE--YTIVGVLN 330
Query: 298 XXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC 357
H +KLG+E + + +L+D Y ++G + ++K F+ + +V
Sbjct: 331 ACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVAL 390
Query: 358 FTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+TS+I+G+ N ++ L + M G+ P+ T VL CS +E G+ V
Sbjct: 391 WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 251/526 (47%), Gaps = 13/526 (2%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
+ Y +SL+ LY++ A KLFD +PERN+ +W +++G+ G E+L L+ +
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 76 LD-NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGC 134
N + + CSN +EG Q HG +K G + ++ FV N LV YS C
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLI-SHEFVRNTLVYMYSLCSG 186
Query: 135 LSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ----FWGKKPSIRSFVG 190
EA + +P D+ ++S LS Y + G F + L++L W + S
Sbjct: 187 NGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRL 246
Query: 191 FLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMT 250
F NL +Q+H +++ GF N V ALI+MYGKCG + A ++
Sbjct: 247 FSNLRDLN----LALQVHSRMVRFGF-NAEVEACGALINMYGKCGKVLYAQRVFDDTHAQ 301
Query: 251 SLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXX 310
++ ++M + ++ +F M + + +E TF+
Sbjct: 302 NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLL- 360
Query: 311 XHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGL 370
H +K GY + V V +L++ Y +SG + ++K F + ++ + ++I+G + +GL
Sbjct: 361 -HGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGL 419
Query: 371 GKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFS 430
G++ LE + MI G P+R+TF+ VL CSH G VE+G FN + + PD H++
Sbjct: 420 GREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYT 479
Query: 431 CMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPE 490
C+V P D V W +LL +C V RN +G++ A+ + P
Sbjct: 480 CIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPN 539
Query: 491 DFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
D V++ +SN ++++ E+E +++ + R + KE G S IG+ +
Sbjct: 540 DSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRN 585
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 171/402 (42%), Gaps = 25/402 (6%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVD--TNIFVANALVDFYSACGCLSEAKKSFQAIP 146
L++ C+N + G +H H+I + + N+L++ Y C A+K F +P
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 147 MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK-KPSIRSFVGFLNLSSKTGNALFGM 205
+V+SW +M+ Y ++G + L+L M F G+ +P+ S +G G
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
Q H C +K G + V++ L+ MY C A+ + LP L +S ++ L C
Sbjct: 157 QFHGCFLKYGLISHEF-VRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 266 GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVS 325
G + ++ +E + +T+ + H ++ G+ ++V
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLS--SLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 326 VSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKG 385
+LI+ Y + G VL +Q+VF+ N+F T+I++ + + ++ L + M K
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 386 LKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI---SPDRDHFSCMVXXXXXXXXX 442
+ P+ TF +L + L+++G L LHG+ S R+H MV
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDL-------LHGLVLKSGYRNH--VMVGNALVNMYA 384
Query: 443 XXXXXXXXQTPGRG----DCVMWSSLLRSCRVHRNETVGRRA 480
+ G D V W++++ C H +GR A
Sbjct: 385 KSGSIEDARKAFSGMTFRDIVTWNTMISGCSHH---GLGREA 423
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
VH R ++ GF + +L+ +Y + G + A ++FD+ +N+ ++ + +
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDK 317
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
F+E L L++++ V N +F L+ + +G LHG V+K G+ + ++ V
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN-HVMVG 376
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
NALV+ Y+ G + +A+K+F + D+++WN+M+S + +GL +ALE M F G+
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI 436
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+ +F+G L S G G+ ++K + + ++ + K G K+A
Sbjct: 437 PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAED 496
Query: 243 TYESLPM 249
+ P+
Sbjct: 497 FMRTAPI 503
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 270/529 (51%), Gaps = 5/529 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H A+K G + + + LV +Y++ A ++FDE+ R+ ++N ++ G+ +L +
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+E + ++ E LD + + L+ ++R C + R ++ +++K G+V + V N
Sbjct: 289 VEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRN 346
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
L+D Y+ CG + A+ F ++ +D +SWNS++S Y +G ++A++L +M ++
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 406
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+++ +++S++ + FG +H IK G + V +ALIDMY KCG++ +++
Sbjct: 407 DHITYLMLISVSTRLADLKFGKGLHSNGIKSGI-CIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+ S+ N+++++ + G ++ M + D TF
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF--LVTLPMCASLA 523
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
HCC ++ GYES++ + +LI+ Y + G + S +VFE++ +V +T +I
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
+ G G++ LE M + G+ PD V F+ ++ CSHSGLV+EG F M++ + I
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKID 643
Query: 424 PDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKI 483
P +H++C+V P + D +W+S+LR+CR + R ++
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRR 703
Query: 484 LLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
++ L+P+D + SN Y+ +++ I++ + +TK G+S I
Sbjct: 704 IIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWI 752
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 193/400 (48%), Gaps = 9/400 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
V+ + + +GF +L++G++LV +Y R+GL+ A ++FDE+P R+L +WN ++ G+ G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
++E L +Y+E+K + + + ++ N +G LHG +K G V++ + V N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG-VNSVVVVNN 246
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLY--IMQFWGK 181
LV Y ++A++ F + + D +S+N+M+ Y + +++ + + QF
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF--- 303
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
KP + + L + I+ ++K GF S V++ LID+Y KCGD+ A
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITAR 362
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
+ S+ NS+++ + G + + ++F +M+ D +T+
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY--LMLISVSTR 420
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
H IK G D+SVS +LID Y + G V S K+F + + + ++
Sbjct: 421 LADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTV 480
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
I+ G L++ M + + PD TFL L C+
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 217/472 (45%), Gaps = 20/472 (4%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDEL-PERNLATWNLVLRGFCELG 62
+H I LG + + L+ Y +L +F + P +N+ WN ++R F + G
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
LF E L Y +++ V + +F +I+ C+ + G ++ ++ +G+ ++++FV
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGF-ESDLFVG 144
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
NALVD YS G L+ A++ F +P+ D++SWNS++S Y+ +G + +ALE+ + ++
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 183 PSIRSFVGFLN-----LSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
P + L L K G L G + V V V + L+ MY K
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS------VVVVNNGLVAMYLKFRRP 258
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXX 297
+A ++ + + N+++ L +V++ MF +D+ D +T S+
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRAC 317
Query: 298 XXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC 357
+ +K G+ + +V LID Y + G ++ ++ VF + +
Sbjct: 318 GHLRDLSLAKYIYNYM--LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 358 FTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR-LVFNSM 416
+ SII+G+ +G + +++ + M+ + D +T+L +++ + ++ G+ L N +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 417 ESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSC 468
+S GI D + ++ + G GD V W++++ +C
Sbjct: 436 KS--GICIDLSVSNALI-DMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESL-PMTSLECCNSLMTSLLH 264
+IH VI +G D+ S LID Y + +++S + + P ++ NS++ +
Sbjct: 25 RIHALVISLGLDS-SDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 265 CGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDV 324
G+ + E +G + + + D+ TF + + +G+ESD+
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI--LDMGFESDL 141
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK 384
V +L+D Y R G + +++VF+++P+ ++ + S+I+G++ +G ++ LE+ +
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS 201
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
+ PD T VL + +V++G + LHG +
Sbjct: 202 WIVPDSFTVSSVLPAFGNLLVVKQG-------QGLHGFA 233
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/542 (28%), Positives = 270/542 (49%), Gaps = 13/542 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH IK G+ N+Y+GSSLV +Y + ++ A + F E+ E N +WN ++ GF ++
Sbjct: 66 EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQV 125
Query: 62 GLFDE---LLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
LLGL E+K V ++ +F L+ + F + Q+H V+K+G +
Sbjct: 126 RDIKTAFWLLGLM-EMKA-AVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLG-LQHE 182
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIP-MEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
I + NA++ Y+ CG +S+AK+ F + +D++SWNSM++ ++ + L A EL MQ
Sbjct: 183 ITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ 242
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGK--CG 235
+ I ++ G L+ S + +FG +H VIK G + + +ALI MY + G
Sbjct: 243 RHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVT-SATNALISMYIQFPTG 301
Query: 236 DIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXX 295
+++A+S +ESL L NS++T G+ +D + F + I +D+ FS
Sbjct: 302 TMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLR 361
Query: 296 XXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPN- 354
H A K G+ S+ V SLI Y + G + ++K F+QI +
Sbjct: 362 SCSDLATLQLGQQI--HALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 419
Query: 355 VFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFN 414
+ ++I G+A +GLG+ L++ M + +K D VTF +LT CSH+GL++EG + N
Sbjct: 420 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 479
Query: 415 SMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNE 474
ME ++ I P +H++ V P D ++ + L CR
Sbjct: 480 LMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEI 539
Query: 475 TVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGL 534
+ + A LL ++PED ++ +S+ YS+ ++E +K++ R + K G S I +
Sbjct: 540 EMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEI 599
Query: 535 NS 536
+
Sbjct: 600 RN 601
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 186/381 (48%), Gaps = 14/381 (3%)
Query: 39 LFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRF 98
LFDE+P+R+ +WN ++ G+ G ++ L+ +K +++G SF L++G ++ +
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 99 FDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLS 158
FD G Q+HG VIK G+ + N++V ++LVD Y+ C + +A ++F+ I + +SWN++++
Sbjct: 62 FDLGEQVHGLVIKGGY-ECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIA 120
Query: 159 VYADNGLFLDALELLYIMQFWGKKPSIRSFVG-FLNLSSKTGNALFG---MQIHCCVIKM 214
+ A LL +M+ K ++ G F L + + +F Q+H V+K+
Sbjct: 121 GFVQVRDIKTAFWLLGLMEM---KAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKL 177
Query: 215 GFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS-LECCNSLMTSLLHCGIVDDVFE 273
G + + + +A+I Y CG + +A ++ L + L NS++ + + FE
Sbjct: 178 GLQH-EITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFE 236
Query: 274 MFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDA 333
+F M + D T++ H IK G E S + +LI
Sbjct: 237 LFIQMQRHWVETDIYTYT--GLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISM 294
Query: 334 YLR--SGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRV 391
Y++ +G + + +FE + ++ + SII GFA GL + ++ + +K D
Sbjct: 295 YIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDY 354
Query: 392 TFLCVLTGCSHSGLVEEGRLV 412
F +L CS ++ G+ +
Sbjct: 355 AFSALLRSCSDLATLQLGQQI 375
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/529 (27%), Positives = 253/529 (47%), Gaps = 14/529 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +I GF NL + L+ LY++ G + A KLFD + +R++ +W ++ F G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ L L+ E+ ++V+ N ++ +++ C + EG Q+HG V K G N+ V +
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEK-GNCAGNLIVRS 152
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
AL+ Y+ CG + EA+ F ++ D++SWN+M+ Y N + L +M GKKP
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP 212
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+F L S ++H IK+GF S ++S L++ Y KCG + NA
Sbjct: 213 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRS-LVNAYVKCGSLANAWKL 271
Query: 244 YESLPMTSLECCNSLMTSL-LHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+E L C +L+T D F++F M+ +DEV S+
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331
Query: 303 XXXXXXXXXHCCAIKLGY-ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
H A+K DV++ SLID Y +SG + + FE++ +V +TS+
Sbjct: 332 VTIGRQI--HGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSL 389
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
I G+ +G ++ +++ M + +KP+ VTFL +L+ CSH+G E G ++++M + HG
Sbjct: 390 IAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHG 449
Query: 422 ISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPG--RGDCVMWSSLLRSCRVHRNETVGRR 479
I +H SC++ G W + L +CR H N + +
Sbjct: 450 IEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKV 509
Query: 480 AAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIG 528
AA LL ++P ++ +++ Y+ G ++ ++ RK+ KE G
Sbjct: 510 AATQLLSMEPRKPVNYINLASVYAANGAWDNALN------TRKLMKESG 552
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGF--- 58
+ +H AIKLGFG + + SLV Y++ G + A KL + +R+L + ++ GF
Sbjct: 234 SELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQ 293
Query: 59 --CELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVD 116
C FD ++ ++ +++ + +++ C+ G Q+HG +K +
Sbjct: 294 NNCTSDAFD----IFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIR 349
Query: 117 TNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM 176
++ + N+L+D Y+ G + +A +F+ + +DV SW S+++ Y +G F A++L M
Sbjct: 350 FDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM 409
Query: 177 QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVI-KMGFDNGSVHVQSALIDMYGKCG 235
+ KP+ +F+ L+ S TG G +I+ +I K G + H+ S +IDM + G
Sbjct: 410 EHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHL-SCIIDMLARSG 468
Query: 236 DIKNAVSTYES 246
++ A + S
Sbjct: 469 YLEEAYALIRS 479
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/549 (26%), Positives = 262/549 (47%), Gaps = 39/549 (7%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP--ERNLATWNLVLRGFC 59
VH + I GF + +GSSL Y++ +D A F+ +P +RN +WN +L G+
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 60 ELGL--FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDT 117
+ + ++L LYN ++ ++ + + I+ C + G +HG +K G +D
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNG-LDK 142
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVY----------------A 161
+ +VA +LV+ Y+ G + A+K F IP+ + + W ++ Y
Sbjct: 143 DDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMR 202
Query: 162 DNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSV 221
D GL LDAL L+ +++ G F G K G + G+ I + F + S
Sbjct: 203 DTGLALDALTLICLVKACGN-----VFAG------KVGKCVHGVSI-----RRSFIDQSD 246
Query: 222 HVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDE 281
++Q+++IDMY KC + NA +E+ ++ +L++ C + F++F M+ E
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 282 GIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVL 341
I ++ T + H I+ G E D S ID Y R G++
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSV--HGYMIRNGIEMDAVNFTSFIDMYARCGNIQ 364
Query: 342 LSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
+++ VF+ +P NV ++S+IN F NGL ++ L+ M + + P+ VTF+ +L+ CS
Sbjct: 365 MARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACS 424
Query: 402 HSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMW 461
HSG V+EG F SM +G+ P+ +H++CMV P + W
Sbjct: 425 HSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAW 484
Query: 462 SSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIAR 521
+LL +CR+H+ + A+ LL ++PE +V++ +SN Y++ G +E ++ +
Sbjct: 485 GALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIK 544
Query: 522 KMTKEIGHS 530
K +G S
Sbjct: 545 GYRKHVGQS 553
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
SVH I+ G + +S + +Y R G I +A +FD +PERN+ +W+ ++ F
Sbjct: 332 KSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGIN 391
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEG-SQLHGHVIKVGWVDTNIF 120
GLF+E L ++++K NV N ++F L+ CS+ EG Q G V
Sbjct: 392 GLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEH 451
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLS-WNSMLS---VYADNGLFLDALELLYIM 176
A +VD G + EAK +P++ + S W ++LS ++ + L + E L M
Sbjct: 452 YA-CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSM 510
Query: 177 QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHV-QSA 226
+ +K S+ ++ LS+ +A ++C KMG HV QSA
Sbjct: 511 E--PEKSSV-----YVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSA 554
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/542 (27%), Positives = 257/542 (47%), Gaps = 13/542 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH ++ G N +I ++LV +Y +LG + + L R+L TWN VL C+
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
E L E+ L+ VE + + ++ CS+ G +LH + +K G +D N FV
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ-FWG 180
+ALVD Y C + ++ F + + WN+M++ Y+ N +AL L M+ G
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+ + G + ++G IH V+K G D VQ+ L+DMY + G I A
Sbjct: 401 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF-VQNTLMDMYSRLGKIDIA 459
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLM------VDEG---IGLDEVTFS 291
+ + + L N+++T + +D + M V +G + L + +
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 292 TXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP 351
H AIK +DV+V +L+D Y + G + +S+KVF+QIP
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 352 LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRL 411
NV + II + +G G++ +++L M+ +G+KP+ VTF+ V CSHSG+V+EG
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 412 VFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGR-GDCVMWSSLLRSCRV 470
+F M+ +G+ P DH++C+V P WSSLL + R+
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 471 HRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHS 530
H N +G AA+ L+ L+P + ++ ++N YS G ++ + +++ + + KE G S
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 531 LI 532
I
Sbjct: 760 WI 761
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 188/424 (44%), Gaps = 18/424 (4%)
Query: 2 NSVHCRAIKLGFGFN-LYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE 60
+H K G+G + + + ++LV LY + G K+FD + ERN +WN ++ C
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFD---EGSQLHGHVIKVGWVDT 117
++ L + + +NVE + + ++ CSN + G Q+H + ++ G +
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG--EL 234
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
N F+ N LV Y G L+ +K + D+++WN++LS N L+ALE L M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
G +P + L S G ++H +K G + + V SAL+DMY C +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXX 297
+ ++ + + N+++ + +F + ++E GL + +
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF-IGMEESAGLLANSTTMAGVVP 413
Query: 298 XXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC 357
H +K G + D V +L+D Y R G + ++ ++F ++ ++
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 358 FTSIINGFAWNGLGKQCLEMLEAM------IRKG-----LKPDRVTFLCVLTGCSHSGLV 406
+ ++I G+ ++ + L +L M + KG LKP+ +T + +L C+ +
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 407 EEGR 410
+G+
Sbjct: 534 AKGK 537
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 139/262 (53%), Gaps = 18/262 (6%)
Query: 1 RNSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE 60
+ ++H +K G + ++ ++L+ +Y RLG ID+A+++F ++ +R+L TWN ++ G+
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 61 LGLFDELLGLYNEIKLDNVEL-------------NGLSFCYLIRGCSNKRFFDEGSQLHG 107
++ L L + K+ N+E N ++ ++ C+ +G ++H
Sbjct: 484 SEHHEDALLLLH--KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541
Query: 108 HVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFL 167
+ IK + T++ V +ALVD Y+ CGCL ++K F IP ++V++WN ++ Y +G
Sbjct: 542 YAIKNN-LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 168 DALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQI-HCCVIKMGFDNGSVHVQSA 226
+A++LL +M G KP+ +F+ S +G G++I + G + S H +
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY-AC 659
Query: 227 LIDMYGKCGDIKNAVSTYESLP 248
++D+ G+ G IK A +P
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMP 681
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 169/394 (42%), Gaps = 22/394 (5%)
Query: 46 RNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQL 105
R+ W +LR L E + Y ++ + ++ + +F L++ ++ + + G Q+
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 106 HGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGL 165
H HV K G+ ++ VAN LV+ Y CG K F I + +SWNS++S
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 166 FLDALELLYIMQFWGKKPSIRSFVGFL----NLSSKTGNALFGMQIHCCVIKMGFDNGSV 221
+ ALE M +PS + V + NL G + G Q+H ++ G N
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG-LMMGKQVHAYGLRKGELNS-- 236
Query: 222 HVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDE 281
+ + L+ MYGK G + ++ S L N++++SL + + E MV E
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 282 GIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVS-VSCSLIDAYLRSGHV 340
G+ DE T S+ H A+K G + S V +L+D Y V
Sbjct: 297 GVEPDEFTISS--VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 341 LLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK-GLKPDRVTFLCVLTG 399
L ++VF+ + + + ++I G++ N K+ L + M GL + T V+
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 400 CSHSGLVEEGRLVFNSMESLHGI----SPDRDHF 429
C SG F+ E++HG DRD F
Sbjct: 415 CVRSG-------AFSRKEAIHGFVVKRGLDRDRF 441
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/533 (27%), Positives = 256/533 (48%), Gaps = 5/533 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + G F I +SL+ +Y + G D A KLF + + TWN ++ G+ + GL
Sbjct: 261 LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGL 320
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+E L + E+ V + ++F L+ S + Q+H ++++ + +IF+ +
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS-ISLDIFLTS 379
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
AL+D Y C +S A+ F DV+ + +M+S Y NGL++D+LE+ + P
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ + V L + G ++H +IK GFDN ++ A+IDMY KCG + A
Sbjct: 440 NEITLVSILPVIGILLALKLGRELHGFIIKKGFDN-RCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+E L + NS++T ++F M GI D V+ S
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE 558
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
H IK SDV +LID Y + G++ + VF+ + N+ + SII
Sbjct: 559 SFGKAI--HGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Query: 364 GFAWNGLGKQCLEMLEAMIRK-GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
+G K L + M+ K G++PD++TFL +++ C H G V+EG F SM +GI
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 423 SPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAK 482
P ++H++C+V P D +W +LL +CR+H+N + A+
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASS 736
Query: 483 ILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
L+ LDP + ++ +SN ++ E+E+ +++ + R++ K G+S I +N
Sbjct: 737 KLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 195/392 (49%), Gaps = 4/392 (1%)
Query: 11 LGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGL 70
LG N ++ SSL+ Y+ G ID+ KLFD + +++ WN++L G+ + G D ++
Sbjct: 167 LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKG 226
Query: 71 YNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYS 130
++ +++D + N ++F ++ C++K D G QLHG V+ G VD + N+L+ YS
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG-VDFEGSIKNSLLSMYS 285
Query: 131 ACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVG 190
CG +A K F+ + D ++WN M+S Y +GL ++L Y M G P +F
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 191 FLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMT 250
L SK N + QIHC +++ + + + SALID Y KC + A + +
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSI-SLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404
Query: 251 SLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXX 310
+ ++++ LH G+ D EMF +V I +E+T +
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS--ILPVIGILLALKLGRE 462
Query: 311 XHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGL 370
H IK G+++ ++ C++ID Y + G + L+ ++FE++ ++ + S+I A +
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 371 GKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSH 402
+++ M G+ D V+ L+ C++
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACAN 554
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 6/315 (1%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
L++ CSN +G Q+H +I V + + + ++ Y+ CG S+ K F + +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLI-VNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 149 --DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQ 206
+ WNS++S + NGL AL + M +G P + +F + N
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 207 IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCG 266
+ V +G D V S+LI Y + G I ++ + N ++ CG
Sbjct: 160 LSDTVSSLGMDCNEF-VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 267 IVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSV 326
+D V + F +M + I + VTF H + G + + S+
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDC--VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 327 SCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGL 386
SL+ Y + G + K+F + + + +I+G+ +GL ++ L MI G+
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 387 KPDRVTFLCVLTGCS 401
PD +TF +L S
Sbjct: 337 LPDAITFSSLLPSVS 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
++H IK ++Y S+L+ +Y + G + A+ +F + E+N+ +WN ++
Sbjct: 562 KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNH 621
Query: 62 GLFDELLGLYNE-IKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
G + L L++E ++ + + ++F +I C + DEG + + + +
Sbjct: 622 GKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQE 681
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPM-EDVLSWNSML 157
+VD + G L+EA ++ +++P D W ++L
Sbjct: 682 HYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLL 719
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 155/581 (26%), Positives = 268/581 (46%), Gaps = 75/581 (12%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLY 71
G+ +N+ +V + + G + +A +LF+ +PE+++ T N +L G+ G +E L L+
Sbjct: 124 GYSWNV-----VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF 178
Query: 72 NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSA 131
E+ N + ++ +++ C+ G Q+H ++ +G V+ + + ++LV+ Y+
Sbjct: 179 KEL---NFSADAITLTTVLKACAELEALKCGKQIHAQIL-IGGVECDSKMNSSLVNVYAK 234
Query: 132 CGCLSEAKKSFQAIPMED-------------------------------VLSWNSMLSVY 160
CG L A + I D V+ WNSM+S Y
Sbjct: 235 CGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGY 294
Query: 161 ADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGS 220
N + ++AL L M+ ++ S R+ +N G G Q+HC K G +
Sbjct: 295 IANNMKMEALVLFNEMRNETREDS-RTLAAVINACIGLGFLETGKQMHCHACKFGLIDDI 353
Query: 221 VHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDD---------- 270
V V S L+DMY KCG A + + NS++ CG +DD
Sbjct: 354 V-VASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIEN 412
Query: 271 ---------------------VFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXX 309
E F M + DEV+ S+
Sbjct: 413 KSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV 472
Query: 310 XXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNG 369
A +G +SD VS SLID Y + G V ++VF+ + + + S+I+G+A NG
Sbjct: 473 FAR--ATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNG 530
Query: 370 LGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHF 429
G + +++ + M G++P ++TF+ VLT C++ GLVEEGR +F SM+ HG PD++HF
Sbjct: 531 QGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHF 590
Query: 430 SCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDP 489
SCMV + P D MWSS+LR C + + +G++AA+ ++ L+P
Sbjct: 591 SCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEP 650
Query: 490 EDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHS 530
E+ ++Q+S ++ +G++E+S ++++ +TK G S
Sbjct: 651 ENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 177/441 (40%), Gaps = 70/441 (15%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLA--------------------------- 36
+H + + G + + SSLV +Y + G + +A
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGR 268
Query: 37 ----LKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRG 92
LFD R + WN ++ G+ + E L L+NE++ + E + + +I
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVINA 327
Query: 93 CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGC------------------ 134
C F + G Q+H H K G +D +I VA+ L+D YS CG
Sbjct: 328 CIGLGFLETGKQMHCHACKFGLID-DIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 135 -------------LSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
+ +AK+ F+ I + ++SWNSM + ++ NG ++ LE + M
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
S ++ + + G Q+ +G D+ V V S+LID+Y KCG +++
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQV-VSSSLIDLYCKCGFVEHGR 505
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
++++ + NS+++ G + ++F M GI ++TF
Sbjct: 506 RVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITF-MVVLTACNYC 564
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP-NVFCFTS 360
+ G+ D ++D R+G+V + + E++P + ++S
Sbjct: 565 GLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSS 624
Query: 361 IINGFAWNG---LGKQCLEML 378
I+ G NG +GK+ E +
Sbjct: 625 ILRGCVANGYKAMGKKAAEKI 645
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 134/355 (37%), Gaps = 75/355 (21%)
Query: 86 FCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAI 145
+ L++ CS++ Q +G ++K G++ + + VAN L+ YS G + A+ F +
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 146 PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGM 205
P + SWN+M+ Y ++G K S+R F + N
Sbjct: 89 PDRNYFSWNTMIEGYMNSG---------------EKGTSLRFFDMMPERDGYSWN----- 128
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
V+ GF K G++ A + ++P + NSL+ +
Sbjct: 129 -----VVVSGF---------------AKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN 168
Query: 266 GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVS 325
G ++ +F + D +T +T H + G E D
Sbjct: 169 GYAEEALRLFKEL---NFSADAITLTT--VLKACAELEALKCGKQIHAQILIGGVECDSK 223
Query: 326 VSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFA------------------- 366
++ SL++ Y + G + ++ + EQI P+ +++I+G+A
Sbjct: 224 MNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRC 283
Query: 367 ---WNGL--GKQCLEM-LEAMI-----RKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
WN + G M +EA++ R + D T V+ C G +E G+
Sbjct: 284 VILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGK 338
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 260/548 (47%), Gaps = 35/548 (6%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
NL+ ++L+ Y + GLI F++LP+R+ TWN+++ G+ GL + YN +
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 76 LD-NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGC 134
D + L ++ +++ S+ G Q+HG VIK+G+ ++ + V + L+ Y+ GC
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGF-ESYLLVGSPLLYMYANVGC 189
Query: 135 LSEAKKSFQAIP-------------------MEDVL-----------SWNSMLSVYADNG 164
+S+AKK F + +ED L SW +M+ A NG
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 165 LFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQ 224
L +A+E M+ G K F L G G QIH C+I+ F + ++V
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQD-HIYVG 308
Query: 225 SALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIG 284
SALIDMY KC + A + ++ + ++ +++ G ++ ++F M GI
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 285 LDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQ 344
D T H AI G V+VS SL+ Y + G + S
Sbjct: 369 PDHYTLGQ--AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 345 KVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSG 404
++F ++ + + +T++++ +A G + +++ + M++ GLKPD VT V++ CS +G
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 405 LVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSL 464
LVE+G+ F M S +GI P H+SCM+ P D + W++L
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 465 LRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMT 524
L +CR N +G+ AA+ L+ LDP A + +S+ Y+ G++++ Q++ + +
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606
Query: 525 KEIGHSLI 532
KE G S I
Sbjct: 607 KEPGQSWI 614
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 195/458 (42%), Gaps = 77/458 (16%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNL------------- 48
+H + IKLGF L +GS L+ +Y +G I A K+F L +RN
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218
Query: 49 -----------------ATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR 91
+W +++G + GL E + + E+K+ ++++ F ++
Sbjct: 219 GMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 92 GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVL 151
C +EG Q+H +I+ + D +I+V +AL+D Y C CL AK F + ++V+
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQD-HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 152 SWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCV 211
SW +M+ Y G +A+++ MQ G P + ++ + + G Q H
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 212 IKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDV 271
I G + V V ++L+ +YGKCGDI ++ + + + +++++ G +
Sbjct: 398 ITSGLIH-YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 272 FEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLI 331
++F MV G+ D VT + +I
Sbjct: 457 IQLFDKMVQHGLKPDGVTLT-------------------------------------GVI 479
Query: 332 DAYLRSGHVLLSQKVFEQIP-----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGL 386
A R+G V Q+ F+ + +P++ ++ +I+ F+ +G ++ + + M
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM---PF 536
Query: 387 KPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISP 424
PD + + +L+ C + G +E G+ S+ L P
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHP 574
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 252/526 (47%), Gaps = 12/526 (2%)
Query: 13 FGFNLYIGSSLVGLYMR-LGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLY 71
F ++ +G SL+ ++++ + A K+FD++ E N+ TW L++ ++G E + +
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 72 NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSA 131
++ L E + + + C+ G QLH I+ G VD V +LVD Y+
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAK 314
Query: 132 C---GCLSEAKKSFQAIPMEDVLSWNSMLSVYADN-GLFLDALELLYIMQFWGK-KPSIR 186
C G + + +K F + V+SW ++++ Y N L +A+ L M G +P+
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 187 SFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYES 246
+F + G Q+ K G + S V +++I M+ K +++A +ES
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS-SVANSVISMFVKSDRMEDAQRAFES 433
Query: 247 LPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXX 306
L +L N+ + + F++ + + +G+ TF++
Sbjct: 434 LSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493
Query: 307 XXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFA 366
H +KLG + V +LI Y + G + + +VF + NV +TS+I GFA
Sbjct: 494 EQI--HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 367 WNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDR 426
+G + LE MI +G+KP+ VT++ +L+ CSH GLV EG FNSM H I P
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKM 611
Query: 427 DHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLG 486
+H++CMV P + D ++W + L +CRVH N +G+ AA+ +L
Sbjct: 612 EHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE 671
Query: 487 LDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
LDP + A ++Q+SN Y+ G++E S +++ R + KE G S I
Sbjct: 672 LDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 102/193 (52%), Gaps = 1/193 (0%)
Query: 7 RAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDE 66
+A K G N + +S++ ++++ ++ A + F+ L E+NL ++N L G C F++
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 67 LLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALV 126
L +EI + ++ +F L+ G +N +G Q+H V+K+G + N V NAL+
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG-LSCNQPVCNALI 516
Query: 127 DFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIR 186
YS CG + A + F + +V+SW SM++ +A +G + LE M G KP+
Sbjct: 517 SMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEV 576
Query: 187 SFVGFLNLSSKTG 199
++V L+ S G
Sbjct: 577 TYVAILSACSHVG 589
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 187/425 (44%), Gaps = 14/425 (3%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP---ERNLATWNLVLRGFCE 60
VH R I+ + + +SL+ LY + G A +F+ + +R++ +W+ ++ +
Sbjct: 84 VHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGN 143
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
G + + ++ E + N + +IR CSN F G G ++K G ++++
Sbjct: 144 NGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC 203
Query: 121 VANALVD-FYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
V +L+D F A K F + +V++W M++ G +A+ M
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC---GD 236
G + + + ++ N G Q+H I+ G + V+ +L+DMY KC G
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGS 320
Query: 237 IKNAVSTYESLPMTSLECCNSLMTSLL-HCGIVDDVFEMFGLMVDEG-IGLDEVTFSTXX 294
+ + ++ + S+ +L+T + +C + + +F M+ +G + + TFS+
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 295 XXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPN 354
A K G S+ SV+ S+I +++S + +Q+ FE + N
Sbjct: 381 KACGNLSDPRVGKQVLGQ--AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 355 VFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFN 414
+ + + ++G N +Q ++L + + L TF +L+G ++ G + +G + +
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 415 SMESL 419
+ L
Sbjct: 499 QVVKL 503
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + +KLG N + ++L+ +Y + G ID A ++F+ + RN+ +W ++ GF + G
Sbjct: 496 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 555
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+L +N++ + V+ N +++ ++ CS+ EG + + + + +
Sbjct: 556 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 615
Query: 124 ALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSML 157
+VD G L++A + +P + DVL W + L
Sbjct: 616 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 249/509 (48%), Gaps = 18/509 (3%)
Query: 39 LFDELPER-NLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKR 97
LF+ ++ ++ +WN V+ G E L ++ ++ ++ SF I+ CS+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSS-- 88
Query: 98 FFD--EGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNS 155
FD G Q H G+ ++IFV++AL+ YS CG L +A+K F IP +++SW S
Sbjct: 89 LFDIFSGKQTHQQAFVFGY-QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147
Query: 156 MLSVYADNGLFLDALELLYIMQFWGKKPSIRSF------VGFLNLSSKTGNALFGMQIHC 209
M+ Y NG LDA+ L + F V ++ S+ IH
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 210 CVIKMGFDNGSVHVQSALIDMYGKCGD--IKNAVSTYESLPMTSLECCNSLMTSLLHCGI 267
VIK GFD G V V + L+D Y K G+ + A ++ + NS+M+ G+
Sbjct: 208 FVIKRGFDRG-VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 268 VDDVFEMFGLMV-DEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSV 326
++ FE+F +V ++ + + +T ST H I++G E DV V
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI--HDQVIRMGLEDDVIV 324
Query: 327 SCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGL 386
S+ID Y + G V ++K F+++ NV +T++I G+ +G + LE+ AMI G+
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Query: 387 KPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXX 446
+P+ +TF+ VL CSH+GL EG FN+M+ G+ P +H+ CMV
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 447 XXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETG 506
+ + D ++WSSLL +CR+H+N + + L LD + ++ +S+ Y++ G
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 507 EFEASMQIKEIAIARKMTKEIGHSLIGLN 535
++ +++ I R + K G SL+ LN
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELN 533
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 155/303 (51%), Gaps = 21/303 (6%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
H +A G+ ++++ S+L+ +Y G ++ A K+FDE+P+RN+ +W ++RG+
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 62 GLFDELLGLYNEIKLDNVE------LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWV 115
G + + L+ ++ +D + L+ + +I CS +H VIK G+
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF- 214
Query: 116 DTNIFVANALVDFYSAC--GCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL 173
D + V N L+D Y+ G ++ A+K F I +D +S+NS++SVYA +G+ +A E+
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 174 YIMQFWGKKPSIRSFVGFLNLS------SKTGNALFGMQIHCCVIKMGFDNGSVHVQSAL 227
+ K + +F + LS S +G G IH VI+MG ++ V V +++
Sbjct: 275 RRLV----KNKVVTF-NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED-DVIVGTSI 328
Query: 228 IDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDE 287
IDMY KCG ++ A ++ + ++ +++ G E+F M+D G+ +
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 288 VTF 290
+TF
Sbjct: 389 ITF 391
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 127/251 (50%), Gaps = 6/251 (2%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMR--LGLIDLALKLFDELPERNLATWNLVLRGFCE 60
S+H IK GF + +G++L+ Y + G + +A K+FD++ +++ ++N ++ + +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 61 LGLFDELLGLYNE-IKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNI 119
G+ +E ++ +K V N ++ ++ S+ G +H VI++G D ++
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED-DV 322
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
V +++D Y CG + A+K+F + ++V SW +M++ Y +G ALEL M
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQ-IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
G +P+ +FV L S G + G + + + G + G H ++D+ G+ G ++
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY-GCMVDLLGRAGFLQ 441
Query: 239 NAVSTYESLPM 249
A + + M
Sbjct: 442 KAYDLIQRMKM 452
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + I++G ++ +G+S++ +Y + G ++ A K FD + +N+ +W ++ G+ G
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ L L+ + V N ++F ++ CS+ EG + + V+ +
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428
Query: 124 ALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLS 158
+VD G L +A Q + M+ D + W+S+L+
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 260/530 (49%), Gaps = 8/530 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H IKLGF ++Y+ +SL+ LYM+LG A K+F+E+PER++ +WN ++ G+ LG
Sbjct: 152 IHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGD 211
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
L L+ E+ + + S + CS+ G ++H H ++ ++ V
Sbjct: 212 GFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMT 271
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM-QFWGKK 182
+++D YS G +S A++ F + ++++WN M+ YA NG DA M + G +
Sbjct: 272 SILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQ 331
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P + + + L S+ L G IH ++ GF V +++ALIDMYG+CG +K+A
Sbjct: 332 PDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMV-LETALIDMYGECGQLKSAEV 386
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
++ + ++ NS++ + + G E+F + D + D T ++
Sbjct: 387 IFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS--ILPAYAES 444
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H +K Y S+ + SL+ Y G + ++K F I L +V + SII
Sbjct: 445 LSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSII 504
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
+A +G G+ + + MI + P++ TF +L CS SG+V+EG F SM+ +GI
Sbjct: 505 MAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGI 564
Query: 423 SPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAK 482
P +H+ CM+ + P +W SLL + R H++ T+ AA+
Sbjct: 565 DPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAE 624
Query: 483 ILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ ++ ++ ++ + N Y+E G +E +IK + ++ +++ S +
Sbjct: 625 QIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTV 674
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 188/382 (49%), Gaps = 8/382 (2%)
Query: 32 LIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR 91
L++ AL+LFDE+ + + WN++++GF GL+ E + Y+ + V+ + ++ ++I+
Sbjct: 79 LMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138
Query: 92 GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVL 151
+ +EG ++H VIK+G+V ++++V N+L+ Y GC +A+K F+ +P D++
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFV-SDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIV 197
Query: 152 SWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCV 211
SWNSM+S Y G +L L M G KP S + L S + G +IHC
Sbjct: 198 SWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257
Query: 212 IKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDV 271
++ + G V V ++++DMY K G++ A + + ++ N ++ G V D
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 272 FEMFGLMVDE-GIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSL 330
F F M ++ G+ D +T H A++ G+ + + +L
Sbjct: 318 FLCFQKMSEQNGLQPDVIT------SINLLPASAILEGRTIHGYAMRRGFLPHMVLETAL 371
Query: 331 IDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDR 390
ID Y G + ++ +F+++ NV + SII + NG LE+ + + L PD
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDS 431
Query: 391 VTFLCVLTGCSHSGLVEEGRLV 412
T +L + S + EGR +
Sbjct: 432 TTIASILPAYAESLSLSEGREI 453
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 123/247 (49%), Gaps = 3/247 (1%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
++H A++ GF ++ + ++L+ +Y G + A +FD + E+N+ +WN ++ + + G
Sbjct: 351 TIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNG 410
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
L L+ E+ ++ + + ++ + EG ++H +++K + +N +
Sbjct: 411 KNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW-SNTIIL 469
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
N+LV Y+ CG L +A+K F I ++DV+SWNS++ YA +G ++ L M
Sbjct: 470 NSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVN 529
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIK-MGFDNGSVHVQSALIDMYGKCGDIKNAV 241
P+ +F L S +G G + + + G D G H ++D+ G+ G+ A
Sbjct: 530 PNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHY-GCMLDLIGRTGNFSAAK 588
Query: 242 STYESLP 248
E +P
Sbjct: 589 RFLEEMP 595
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 144/531 (27%), Positives = 260/531 (48%), Gaps = 6/531 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + IKL +L ++L+ +Y+R + A ++F +P ++L +W+ ++ GF +LG
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGF 249
Query: 64 -FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
F+ L L + N F ++ CS+ D GSQ+HG IK + N
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK-SELAGNAIAG 308
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
+L D Y+ CG L+ A++ F I D SWN +++ A+NG +A+ + M+ G
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P S L +K GMQIH +IK GF + V ++L+ MY C D+ +
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF-LADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 243 TYESLPMTSLECC-NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
+E + N+++T+ L ++ +F LM+ D +T
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
HC ++K G + + LID Y + G + ++++F+ + +V ++++
Sbjct: 488 SLKLGSQV--HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTL 545
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
I G+A +G G++ L + + M G++P+ VTF+ VLT CSH GLVEEG ++ +M++ HG
Sbjct: 546 IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG 605
Query: 422 ISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAA 481
ISP ++H SC+V + D V+W +LL +C+ N + ++AA
Sbjct: 606 ISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAA 665
Query: 482 KILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ +L +DP + H+ + + ++ +G +E + ++ + K G S I
Sbjct: 666 ENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWI 716
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 182/407 (44%), Gaps = 22/407 (5%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + ++ + + ++ +Y + G + A ++FD +PERNL ++ V+ G+ + G
Sbjct: 89 IHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQ 148
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E + LY ++ +++ + +F +I+ C++ G QLH VIK+ +++ N
Sbjct: 149 GAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE-SSSHLIAQN 207
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK-K 182
AL+ Y +S+A + F IPM+D++SW+S+++ ++ G +AL L M +G
Sbjct: 208 ALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFH 267
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+ F L S +G QIH IK ++ +L DMY +CG + +A
Sbjct: 268 PNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI-AGCSLCDMYARCGFLNSARR 326
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
++ + N ++ L + G D+ +F M G D ++ +
Sbjct: 327 VFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRS--LLCAQTKP 384
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H IK G+ +D++V SL+ Y + +FE F +
Sbjct: 385 MALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED--------FRNNA 436
Query: 363 NGFAWNGLGKQCLE---------MLEAMIRKGLKPDRVTFLCVLTGC 400
+ +WN + CL+ + + M+ +PD +T +L GC
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 136/290 (46%), Gaps = 3/290 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+ +H IK N G SL +Y R G ++ A ++FD++ + A+WN+++ G
Sbjct: 290 SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANN 349
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G DE + ++++++ + +S L+ + +G Q+H ++IK G++ ++ V
Sbjct: 350 GYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFL-ADLTV 408
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
N+L+ Y+ C L F+ D +SWN++L+ + ++ L L +M
Sbjct: 409 CNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE 468
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+P + L + + G Q+HC +K G +++ LIDMY KCG + A
Sbjct: 469 CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF-IKNGLIDMYAKCGSLGQA 527
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
++S+ + ++L+ G ++ +F M GI + VTF
Sbjct: 528 RRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTF 577
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 154/359 (42%), Gaps = 10/359 (2%)
Query: 55 LRGFCELGLFDELLGLYN-EIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVG 113
+ C+ + E L ++ K + ++ ++ LI CS+ R +G ++H H++
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 114 WVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL 173
+ + N ++ Y CG L +A++ F +P +++S+ S+++ Y+ NG +A+ L
Sbjct: 98 -CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLY 156
Query: 174 YIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHV--QSALIDMY 231
M P +F + + + + G Q+H VIK+ S H+ Q+ALI MY
Sbjct: 157 LKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKL---ESSSHLIAQNALIAMY 213
Query: 232 GKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGI-GLDEVTF 290
+ + +A + +PM L +S++ G + M+ G+ +E F
Sbjct: 214 VRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIF 273
Query: 291 STXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQI 350
+ H IK + CSL D Y R G + +++VF+QI
Sbjct: 274 GS--SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 351 PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
P+ + II G A NG + + + M G PD ++ +L + + +G
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQG 390
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 87/164 (53%), Gaps = 1/164 (0%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+ VHC ++K G +I + L+ +Y + G + A ++FD + R++ +W+ ++ G+ +
Sbjct: 493 SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQS 552
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G +E L L+ E+K +E N ++F ++ CS+ +EG +L+ + +
Sbjct: 553 GFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEH 612
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLSVYADNG 164
+ +VD + G L+EA++ + +E DV+ W ++LS G
Sbjct: 613 CSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQG 656
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 50/88 (56%)
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
D ++ ++ Y + G + +++VF+ +P N+ +TS+I G++ NG G + + + M+
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 383 RKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
++ L PD+ F ++ C+ S V G+
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGK 188
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 256/521 (49%), Gaps = 9/521 (1%)
Query: 17 LYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKL 76
LY+ ++L+ +Y R G + A ++ ++ ++ TWN +++G+ + ++ E L ++++
Sbjct: 283 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 342
Query: 77 DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLS 136
+ + +S +I G +LH +VIK GW D+N+ V N L+D YS C
Sbjct: 343 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW-DSNLQVGNTLIDMYSKCNLTC 401
Query: 137 EAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFV--GFLNL 194
++F + +D++SW ++++ YA N ++ALEL K+ I + L
Sbjct: 402 YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF--RDVAKKRMEIDEMILGSILRA 459
Query: 195 SSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC 254
SS + L +IHC +++ G + +Q+ L+D+YGKC ++ A +ES+ +
Sbjct: 460 SSVLKSMLIVKEIHCHILRKGLLD--TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVS 517
Query: 255 CNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCC 314
S+++S G + E+F MV+ G+ D V HC
Sbjct: 518 WTSMISSSALNGNESEAVELFRRMVETGLSADSVAL--LCILSAAASLSALNKGREIHCY 575
Query: 315 AIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQC 374
++ G+ + S++ +++D Y G + ++ VF++I + +TS+IN + +G GK
Sbjct: 576 LLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAA 635
Query: 375 LEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVX 434
+E+ + M + + PD ++FL +L CSH+GL++EGR ME + + P +H+ C+V
Sbjct: 636 VELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVD 695
Query: 435 XXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAV 494
+W +LL +CR H + +G AA+ LL L+P++
Sbjct: 696 MLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGN 755
Query: 495 HLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
+ VSN ++E G + +++ A M K G S I ++
Sbjct: 756 LVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMD 796
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 171/365 (46%), Gaps = 4/365 (1%)
Query: 38 KLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKR 97
K+FDE+P+R WN ++ + G L LY ++++ V L SF L++ C+ R
Sbjct: 100 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 159
Query: 98 FFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSM 156
GS+LH ++K+G+ T F+ NALV Y+ LS A++ F + D + WNS+
Sbjct: 160 DIRSGSELHSLLVKLGYHSTG-FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 218
Query: 157 LSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGF 216
LS Y+ +G L+ LEL M G P+ + V L A G +IH V+K
Sbjct: 219 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 278
Query: 217 DNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFG 276
+ ++V +ALI MY +CG + A + + NSL+ + + + E F
Sbjct: 279 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 338
Query: 277 LMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLR 336
M+ G DEV+ ++ H IK G++S++ V +LID Y +
Sbjct: 339 DMIAAGHKSDEVSMTS--IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 396
Query: 337 SGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCV 396
+ F ++ ++ +T++I G+A N + LE+ + +K ++ D + +
Sbjct: 397 CNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 456
Query: 397 LTGCS 401
L S
Sbjct: 457 LRASS 461
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 189/412 (45%), Gaps = 5/412 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLAT-WNLVLRGFCE 60
+ +H +KLG+ +I ++LV +Y + + A +LFD E+ A WN +L +
Sbjct: 165 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 224
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
G E L L+ E+ + N + + C + G ++H V+K + ++
Sbjct: 225 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 284
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
V NAL+ Y+ CG + +A++ + + DV++WNS++ Y N ++ +ALE M G
Sbjct: 285 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 344
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
K S + S + N L GM++H VIK G+D+ ++ V + LIDMY KC
Sbjct: 345 HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS-NLQVGNTLIDMYSKCNLTCYM 403
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXX 300
+ + L +++ + E+F + + + +DE+ +
Sbjct: 404 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGS--ILRASS 461
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
HC ++ G D + L+D Y + ++ + +VFE I +V +TS
Sbjct: 462 VLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTS 520
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+I+ A NG + +E+ M+ GL D V LC+L+ + + +GR +
Sbjct: 521 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREI 572
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 5/263 (1%)
Query: 139 KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKT 198
+K F +P +WN+M+ Y NG AL L + M+ G + SF L +K
Sbjct: 99 EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 158
Query: 199 GNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC-NS 257
+ G ++H ++K+G+ + + + +AL+ MY K D+ A ++ NS
Sbjct: 159 RDIRSGSELHSLLVKLGY-HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNS 217
Query: 258 LMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIK 317
+++S G + E+F M G + +++ H +K
Sbjct: 218 ILSSYSTSGKSLETLELFREMHMTGPAPN--SYTIVSALTACDGFSYAKLGKEIHASVLK 275
Query: 318 LG-YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLE 376
+ S++ V +LI Y R G + ++++ Q+ +V + S+I G+ N + K+ LE
Sbjct: 276 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALE 335
Query: 377 MLEAMIRKGLKPDRVTFLCVLTG 399
MI G K D V+ ++
Sbjct: 336 FFSDMIAAGHKSDEVSMTSIIAA 358
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 143/516 (27%), Positives = 243/516 (47%), Gaps = 5/516 (0%)
Query: 17 LYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKL 76
L + +SL+ LY + G + A+KLFDE+P R++ + N+V GF + L + L
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM-L 148
Query: 77 DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLS 136
+ + + ++ C F +H I G+ D I V N L+ Y CGC
Sbjct: 149 GSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGY-DKEISVGNKLITSYFKCGCSV 207
Query: 137 EAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS 196
+ F + +V++ +++S +N L D L L +M+ P+ +++ L S
Sbjct: 208 SGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACS 267
Query: 197 KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCN 256
+ + G QIH + K G ++ + ++SAL+DMY KCG I++A + +ES
Sbjct: 268 GSQRIVEGQQIHALLWKYGIES-ELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMT 326
Query: 257 SLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAI 316
++ L G ++ + F M+ G+ +D S H I
Sbjct: 327 VILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQL--HSLVI 384
Query: 317 KLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLE 376
K + + V+ LI+ Y + G + SQ VF ++P N + S+I FA +G G L+
Sbjct: 385 KRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALK 444
Query: 377 MLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXX 436
+ E M +KP VTFL +L CSH GL+++GR + N M+ +HGI P +H++C++
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDML 504
Query: 437 XXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHL 496
P + DC +W +LL +C H + VG AA+ L P+ + H+
Sbjct: 505 GRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHI 564
Query: 497 QVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
++N YS G+++ + + A +TKE G S I
Sbjct: 565 LIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSI 600
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 180/422 (42%), Gaps = 40/422 (9%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H AI G+ + +G+ L+ Y + G +FD + RN+ T V+ G E L
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
++ L L++ ++ V N +++ + CS + EG Q+H + K G +++ + + +
Sbjct: 237 HEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYG-IESELCIES 295
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
AL+D YS CG + +A F++ D +S +L A NG +A++ M G +
Sbjct: 296 ALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEI 355
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
L +S + G Q+H VIK F +G+ V + LI+MY KCGD+ ++ +
Sbjct: 356 DANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF-SGNTFVNNGLINMYSKCGDLTDSQTV 414
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+ +P + NS++ + G +++ M + +VTF
Sbjct: 415 FRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTF------------- 461
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
H C+ LID G LL++ P +T II+
Sbjct: 462 ----LSLLHACS-----------HVGLID----KGRELLNEMKEVHGIEPRTEHYTCIID 502
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
GL K+ ++++ LKPD + +L CS G E G + E L +
Sbjct: 503 MLGRAGLLKEAKSFIDSL---PLKPDCKIWQALLGACSFHGDTEVGEY---AAEQLFQTA 556
Query: 424 PD 425
PD
Sbjct: 557 PD 558
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 254/531 (47%), Gaps = 8/531 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC+ +K+ F+ + + L+ +Y + G I A K+F+++ RN+ W ++ G+ + L
Sbjct: 164 IHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+E L L+N ++ +NV N ++ LI C+ +G HG ++K G ++ + +
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG-IELSSCLVT 281
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+L+D Y CG +S A++ F D++ W +M+ Y NG +AL L M+ KP
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ + L+ N G +H IK+G +V +AL+ MY KC ++A
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGLSIKVGI--WDTNVANALVHMYAKCYQNRDAKYV 399
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+E + NS+++ G + + +F M E + + VT ++
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459
Query: 304 XXXXXXXXHCCAIKLGY--ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
H ++KLG+ S V V +L+D Y + G ++ +F+ I N ++++
Sbjct: 460 AVGSSL--HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
I G+ G LE+ E M++K KP+ TF +L+ C H+G+V EG+ F+SM +
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 577
Query: 422 ISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAA 481
+P H++CMV + P + D + + L C +H +G
Sbjct: 578 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 637
Query: 482 KILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
K +L L P+D + ++ VSN Y+ G + + +++ + R ++K GHS +
Sbjct: 638 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 180/408 (44%), Gaps = 13/408 (3%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
++ I + LV LY G A +FD++PE + W ++LR +C E++ LY+ +
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
+ + F ++ C+ + D G ++H ++KV D V L+D Y+ CG +
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN--VVLTGLLDMYAKCGEI 192
Query: 136 SEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLS 195
A K F I + +V+ W SM++ Y N L + L L M+ + ++ +
Sbjct: 193 KSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMAC 252
Query: 196 SKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC 255
+K G H C++K G + S V S L+DMY KCGDI NA + L
Sbjct: 253 TKLSALHQGKWFHGCLVKSGIELSSCLVTS-LLDMYVKCGDISNARRVFNEHSHVDLVMW 311
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
+++ H G V++ +F M +G+ + + H +
Sbjct: 312 TAMIVGYTHNGSVNEALSLFQKM--KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLS 369
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCL 375
IK+G D +V+ +L+ Y + ++ VFE ++ + SII+GF+ NG + L
Sbjct: 370 IKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEAL 428
Query: 376 EMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
+ M + + P+ VT + + C+ G + G SLH S
Sbjct: 429 FLFHRMNSESVTPNGVTVASLFSACASLGSLAVG-------SSLHAYS 469
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 151/569 (26%), Positives = 264/569 (46%), Gaps = 43/569 (7%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYM--RLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
H I+ G + Y S L + ++ A K+FDE+P+ N WN ++R +
Sbjct: 49 THGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASG 108
Query: 62 GLFDELLGLY---NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
D +L ++ + + N +F +LI+ + G LHG +K V ++
Sbjct: 109 P--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA-VGSD 165
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
+FVAN+L+ Y +CG L A K F I +DV+SWNSM++ + G ALEL M+
Sbjct: 166 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 225
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
K S + VG L+ +K N FG Q+ C I+ N ++ + +A++DMY KCG I+
Sbjct: 226 EDVKASHVTMVGVLSACAKIRNLEFGRQV-CSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 239 NAVSTYE-------------------------------SLPMTSLECCNSLMTSLLHCGI 267
+A ++ S+P + N+L+++ G
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 268 VDDVFEMFG-LMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSV 326
++ +F L + + + L+++T + H K G + V
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI--HSYIKKHGIRMNFHV 402
Query: 327 SCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGL 386
+ +LI Y + G + S++VF + +VF ++++I G A +G G + ++M M +
Sbjct: 403 TSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANV 462
Query: 387 KPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXX 446
KP+ VTF V CSH+GLV+E +F+ MES +GI P+ H++C+V
Sbjct: 463 KPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAV 522
Query: 447 XXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETG 506
P +W +LL +C++H N + A LL L+P + H+ +SN Y++ G
Sbjct: 523 KFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLG 582
Query: 507 EFEASMQIKEIAIARKMTKEIGHSLIGLN 535
++E ++++ + KE G S I ++
Sbjct: 583 KWENVSELRKHMRVTGLKKEPGCSSIEID 611
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 181/384 (47%), Gaps = 35/384 (9%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
S+H A+K G ++++ +SL+ Y G +D A K+F + E+++ +WN ++ GF +
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G D+ L L+ +++ ++V+ + ++ ++ C+ R + G Q+ + I+ V+ N+ +
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY-IEENRVNVNLTL 269
Query: 122 ANALVDFYSACGCLSEAKKSFQA-------------------------------IPMEDV 150
ANA++D Y+ CG + +AK+ F A +P +D+
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 151 LSWNSMLSVYADNGLFLDALELLYIMQFWGK-KPSIRSFVGFLNLSSKTGNALFGMQIHC 209
++WN+++S Y NG +AL + + +Q K + + V L+ ++ G G IH
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 210 CVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVD 269
+ K G + HV SALI MY KCGD++ + + S+ + ++++ L G +
Sbjct: 390 YIKKHGI-RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 270 DVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCS 329
+ +MF M + + + VTF T H G +
Sbjct: 449 EAVDMFYKMQEANVKPNGVTF-TNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 330 LIDAYLRSGHVLLSQKVFEQIPLP 353
++D RSG++ + K E +P+P
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIP 531
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 158/624 (25%), Positives = 275/624 (44%), Gaps = 97/624 (15%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG- 62
VHCR IK G F++Y+ ++L+ +Y + G A KLFDE+P R +WN VL + + G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 63 ------LFDEL-----------------LGLYN-------EIKLDNVELNGLSFCYLIRG 92
FD+L +G Y+ ++ + +E + ++
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 93 CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK------------- 139
+ R + G ++H ++K+G + N+ V+N+L++ Y+ CG AK
Sbjct: 156 VAATRCMETGKKVHSFIVKLG-LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISS 214
Query: 140 ------------------KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM-QFWG 180
F+ + D+++WNSM+S + G L AL++ M +
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 274
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
P + L+ + G QIH ++ GFD + V +ALI MY +CG ++ A
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI-VLNALISMYSRCGGVETA 333
Query: 241 VSTYESLPMTSL--ECCNSLMTSLLHCGIVDDVFEMFGLMVDEGI--------------- 283
E L E +L+ + G ++ +F + D +
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 284 --------------GLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCS 329
G +++ H A+K G VSVS +
Sbjct: 394 YGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNA 453
Query: 330 LIDAYLRSGHVLLSQKVFEQIPLP-NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
LI Y ++G++ + + F+ I + +TS+I A +G ++ LE+ E M+ +GL+P
Sbjct: 454 LITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRP 513
Query: 389 DRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXX 448
D +T++ V + C+H+GLV +GR F+ M+ + I P H++CMV
Sbjct: 514 DHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEF 573
Query: 449 XXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEF 508
+ P D V W SLL +CRVH+N +G+ AA+ LL L+PE+ + ++N YS G++
Sbjct: 574 IEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKW 633
Query: 509 EASMQIKEIAIARKMTKEIGHSLI 532
E + +I++ ++ KE G S I
Sbjct: 634 EEAAKIRKSMKDGRVKKEQGFSWI 657
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 260/541 (48%), Gaps = 19/541 (3%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG- 62
VH A+KL L + ++L+ +Y + G I A +F +N+ +WN ++ GF G
Sbjct: 314 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 63 ---LFD---ELLGLYNEIKLDNVE-LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWV 115
FD ++L ++K D V LN + C+ ++ F +LH + +K +V
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCF------HESFLPSLKELHCYSLKQEFV 427
Query: 116 DTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYI 175
N VANA V Y+ CG LS A++ F I + V SWN+++ +A + +L+
Sbjct: 428 -YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 176 MQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCG 235
M+ G P + L+ SK + G ++H +I+ + + V +++ +Y CG
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER-DLFVYLSVLSLYIHCG 545
Query: 236 DIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXX 295
++ + ++++ SL N+++T L G D +F MV GI L S
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL--CGISMMPV 603
Query: 296 XXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNV 355
H A+K E D ++CSLID Y ++G + S KVF + +
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 663
Query: 356 FCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNS 415
+ ++I G+ +GL K+ +++ E M R G PD +TFL VLT C+HSGL+ EG +
Sbjct: 664 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ 723
Query: 416 MESLHGISPDRDHFSCMVXXX-XXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNE 474
M+S G+ P+ H++C++ + D +W SLL SCR+H+N
Sbjct: 724 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNL 783
Query: 475 TVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGL 534
+G + A L L+PE ++ +SN Y+ G++E ++++ + K+ G S I L
Sbjct: 784 EMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843
Query: 535 N 535
N
Sbjct: 844 N 844
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 185/389 (47%), Gaps = 13/389 (3%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
+ ++ +Y G D + +FD L +NL WN V+ + L+DE+L + E+ + +
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM-ISTTD 182
Query: 81 LNGLSFCY--LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA 138
L F Y +I+ C+ G +HG V+K G V+ ++FV NALV FY G +++A
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-DVFVGNALVSFYGTHGFVTDA 241
Query: 139 KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL-YIMQFWGK---KPSIRSFVGFLNL 194
+ F +P +++SWNSM+ V++DNG ++ LL +M+ G P + + V L +
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 195 SSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC 254
++ G +H +K+ D V + +AL+DMY KCG I NA ++ ++
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELV-LNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 255 CNSLMTSLLHCGIVDDVFEMFGLMV--DEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXH 312
N+++ G F++ M+ E + DEVT H
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI--LNAVPVCFHESFLPSLKELH 418
Query: 313 CCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGK 372
C ++K + + V+ + + +Y + G + +Q+VF I V + ++I G A + +
Sbjct: 419 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478
Query: 373 QCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
L+ M GL PD T +L+ CS
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 185/406 (45%), Gaps = 12/406 (2%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+VH +K G ++++G++LV Y G + AL+LFD +PERNL +WN ++R F + G
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 63 LFDELLGLYNEIKLDNVE----LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
+E L E+ +N + + + ++ C+ +R G +HG +K+ +D
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR-LDKE 326
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
+ + NAL+D YS CGC++ A+ F+ ++V+SWN+M+ ++ G ++L M
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALF---GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCG 235
G+ V LN + F ++HC +K F + V +A + Y KCG
Sbjct: 387 GGEDVKADE-VTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL-VANAFVASYAKCG 444
Query: 236 DIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXX 295
+ A + + ++ N+L+ H D + + + GL +F+
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGG--HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 296 XXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNV 355
H I+ E D+ V S++ Y+ G + Q +F+ + ++
Sbjct: 503 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562
Query: 356 FCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
+ ++I G+ NG + L + M+ G++ ++ + V CS
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 159/364 (43%), Gaps = 14/364 (3%)
Query: 55 LRGFCELGLFDELLGLYNEIKLDNVE------LNGLSFCYLIRGCSNKRFFDEGSQLHGH 108
+ FCE G D+ E D+ L + L++ ++ + G ++H
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 109 VIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLD 168
V + + + ++ Y+ CG +++ F A+ +++ WN+++S Y+ N L+ +
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 169 ALE-LLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSAL 227
LE + ++ P ++ + + + G+ +H V+K G V V +AL
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-DVFVGNAL 228
Query: 228 IDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDE---GIG 284
+ YG G + +A+ ++ +P +L NS++ G ++ F + G M++E G
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAF 288
Query: 285 LDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQ 344
+ +V + H A+KL + ++ ++ +L+D Y + G + +Q
Sbjct: 289 MPDVA-TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347
Query: 345 KVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKG--LKPDRVTFLCVLTGCSH 402
+F+ NV + +++ GF+ G ++L M+ G +K D VT L + C H
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Query: 403 SGLV 406
+
Sbjct: 408 ESFL 411
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/503 (26%), Positives = 240/503 (47%), Gaps = 9/503 (1%)
Query: 32 LIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR 91
L+ L + F P + L + C G E L E+ + E+ + L+
Sbjct: 4 LMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLN 60
Query: 92 GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVL 151
C +KR +G ++H H+IK ++ ++ L+ FY C CL +A+K +P ++V+
Sbjct: 61 ACLDKRALRDGQRVHAHMIKTRYLPAT-YLRTRLLIFYGKCDCLEDARKVLDEMPEKNVV 119
Query: 152 SWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCV 211
SW +M+S Y+ G +AL + M KP+ +F L + G QIH +
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 212 IKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDV 271
+K +D+ + V S+L+DMY K G IK A +E LP + C +++ G+ ++
Sbjct: 180 VKWNYDS-HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 272 FEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLI 331
EMF + EG+ + VT+++ HC ++ + SLI
Sbjct: 239 LEMFHRLHSEGMSPNYVTYAS--LLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 296
Query: 332 DAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI-RKGLKPDR 390
D Y + G++ ++++F+ +P + +++ G++ +GLG++ LE+ M K +KPD
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 391 VTFLCVLTGCSHSGLVEEGRLVFNSM-ESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXX 449
VT L VL+GCSH + + G +F+ M +G P +H+ C+V
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416
Query: 450 XQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFE 509
+ P + + SLL +CRVH + +G + L+ ++PE+ ++ +SN Y+ G +
Sbjct: 417 KRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWA 476
Query: 510 ASMQIKEIAIARKMTKEIGHSLI 532
++ + + + +TKE G S I
Sbjct: 477 DVNNVRAMMMQKAVTKEPGRSWI 499
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 153/290 (52%), Gaps = 3/290 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH IK + Y+ + L+ Y + ++ A K+ DE+PE+N+ +W ++ + +
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G E L ++ E+ + + N +F ++ C G Q+HG ++K + D++IFV
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY-DSHIFV 190
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
++L+D Y+ G + EA++ F+ +P DV+S ++++ YA GL +ALE+ + + G
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
P+ ++ L S G Q HC V++ +V +Q++LIDMY KCG++ A
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV-LQNSLIDMYSKCGNLSYAR 309
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG-IGLDEVTF 290
++++P + N+++ G+ +V E+F LM DE + D VT
Sbjct: 310 RLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTL 359
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 5/250 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H +K + ++++GSSL+ +Y + G I A ++F+ LPER++ + ++ G+ +L
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
GL +E L +++ + + + N +++ L+ S D G Q H HV++ + +
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE-LPFYAVL 291
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
N+L+D YS CG LS A++ F +P +SWN+ML Y+ +GL + LEL +M+ +
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 182 -KPSIRSFVGFLNLSSKTGNALFGMQIHCCVI--KMGFDNGSVHVQSALIDMYGKCGDIK 238
KP + + L+ S G+ I ++ + G G+ H ++DM G+ G I
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY-GCIVDMLGRAGRID 410
Query: 239 NAVSTYESLP 248
A + +P
Sbjct: 411 EAFEFIKRMP 420
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 147/564 (26%), Positives = 266/564 (47%), Gaps = 37/564 (6%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +K+G+ +L++ +SLV Y G +D A K+FDE+ ERN+ +W ++ G+
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 64 FDELLGLY-NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+ + L+ ++ + V N ++ +I C+ + G +++ + G ++ N +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG-IEVNDLMV 274
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
+ALVD Y C + AK+ F ++ N+M S Y GL +AL + +M G +
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC-------- 234
P S + ++ S+ N L+G H V++ GF++ ++ +ALIDMY KC
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFR 393
Query: 235 -----------------------GDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDV 271
G++ A T+E++P ++ N++++ L+ + ++
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 272 FEMF-GLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSL 330
E+F + EG+ D VT + + K G + DV + +L
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI--EKNGIQLDVRLGTTL 511
Query: 331 IDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDR 390
+D + R G + +F + +V +T+ I A G ++ +E+ + MI +GLKPD
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 391 VTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXX 450
V F+ LT CSH GLV++G+ +F SM LHG+SP+ H+ CMV
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 451 QTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEA 510
P + V+W+SLL +CRV N + AA+ + L PE ++ +SN Y+ G +
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691
Query: 511 SMQIKEIAIARKMTKEIGHSLIGL 534
+++ + + K G S I +
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSIQI 715
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 185/376 (49%), Gaps = 9/376 (2%)
Query: 51 WNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVI 110
+N ++RG+ GL +E + L+ + + + +F + + C+ R G Q+HG ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 111 KVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDAL 170
K+G+ ++FV N+LV FY+ CG L A+K F + +V+SW SM+ YA DA+
Sbjct: 162 KMGYA-KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 171 ELLYIM-QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALID 229
+L + M + P+ + V ++ +K + G +++ + G + + V SAL+D
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVD 279
Query: 230 MYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVT 289
MY KC I A ++ ++L+ CN++ ++ + G+ + +F LM+D G+ D +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI- 338
Query: 290 FSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQ 349
S H ++ G+ES ++ +LID Y++ + ++F++
Sbjct: 339 -SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 350 IPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
+ V + SI+ G+ NG E E M K + V++ +++G L EE
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEA 453
Query: 410 RLVFNSMESLHGISPD 425
VF SM+S G++ D
Sbjct: 454 IEVFCSMQSQEGVNAD 469
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 250/531 (47%), Gaps = 41/531 (7%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+HC A++LGFG +L++ +SL+ +Y + ++ A +F E+PE N+ +WN+++ GF +
Sbjct: 235 KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQE 294
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
D+ + ++ + N ++ ++ C + G V+T
Sbjct: 295 YRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC----------------FRSGDVET---- 334
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
++ F +IP V +WN+MLS Y++ + +A+ MQF
Sbjct: 335 ----------------GRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL 378
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
KP + L+ ++ G QIH VI+ S H+ S LI +Y +C ++ +
Sbjct: 379 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS-HIVSGLIAVYSECEKMEISE 437
Query: 242 STYES-LPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGI-GLDEVTFSTXXXXXXX 299
++ + + C NS+++ H + +F M + +E +F+T
Sbjct: 438 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 497
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFT 359
H +K GY SD V +L D Y + G + +++ F+ + N +
Sbjct: 498 LCSLLHGRQF--HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWN 555
Query: 360 SIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESL 419
+I+G+ NG G + + + MI G KPD +TF+ VLT CSHSGLVE G + +SM+ +
Sbjct: 556 EMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRI 615
Query: 420 HGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRR 479
HGI P+ DH+ C+V TP + V+W LL SCRVH + ++ RR
Sbjct: 616 HGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARR 675
Query: 480 AAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHS 530
A+ L+ LDP+ A ++ +SN YS +++ S ++ + ++ K G S
Sbjct: 676 VAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 726
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 149/307 (48%), Gaps = 9/307 (2%)
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
+++ NA + F G L EA + F +P DV+SWN+M+SV G AL + M
Sbjct: 37 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 96
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
G PS + L+ SK + +FGM+ H +K G D ++ V +AL+ MY KCG I
Sbjct: 97 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDK-NIFVGNALLSMYAKCGFI 155
Query: 238 KN-AVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX 296
+ V +ESL + +++ L V + +MF LM ++G+ +D V S
Sbjct: 156 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 215
Query: 297 XXX-------XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQ 349
HC A++LG+ D+ ++ SL++ Y ++ + ++ +F +
Sbjct: 216 SAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE 275
Query: 350 IPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
+P NV + +I GF + +E L M G +P+ VT + VL C SG VE G
Sbjct: 276 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 335
Query: 410 RLVFNSM 416
R +F+S+
Sbjct: 336 RRIFSSI 342
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 182/408 (44%), Gaps = 51/408 (12%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
++Y ++ + ++G + A ++FD +PER++ +WN ++ G ++ L +Y +
Sbjct: 37 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 96
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
D + + ++ CS G + HG +K G +D NIFV NAL+ Y+ CG +
Sbjct: 97 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTG-LDKNIFVGNALLSMYAKCGFI 155
Query: 136 SE-AKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL 194
+ + F+++ + +S+ +++ A L+A+++ +M G + L++
Sbjct: 156 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 215
Query: 195 SSKT----------GNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTY 244
S+ GN L G QIHC +++GF G +H+ ++L+++Y K D+ A +
Sbjct: 216 SAPREGCDSLSEIYGNEL-GKQIHCLALRLGF-GGDLHLNNSLLEIYAKNKDMNGAELIF 273
Query: 245 ESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXX 304
+P ++ N ++ D E M D G +EVT
Sbjct: 274 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT--------------- 318
Query: 305 XXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIING 364
S++ A RSG V +++F IP P+V + ++++G
Sbjct: 319 ----------------------CISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSG 356
Query: 365 FAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
++ ++ + M + LKPD+ T +L+ C+ +E G+ +
Sbjct: 357 YSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 404
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 175/413 (42%), Gaps = 57/413 (13%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGLI-DLALKLFDELPERNLATWNLVLRGFCELGL 63
H A+K G N+++G++L+ +Y + G I D +++F+ L + N ++ V+ G
Sbjct: 127 HGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENK 186
Query: 64 FDELLGLY-----NEIKLDNVEL-NGLSFCYLIRGCS--NKRFFDE-GSQLHGHVIKVGW 114
E + ++ +++D+V L N LS GC ++ + +E G Q+H +++G+
Sbjct: 187 VLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGF 246
Query: 115 VDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLY 174
++ + N+L++ Y+ ++ A+ F +P +V+SWN M+ + ++E L
Sbjct: 247 -GGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLT 305
Query: 175 IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
M+ G +P+ ++ C I + G C
Sbjct: 306 RMRDSGFQPN---------------------EVTC------------------ISVLGAC 326
Query: 235 ---GDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFS 291
GD++ + S+P S+ N++++ + ++ F M + + D+ T S
Sbjct: 327 FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLS 386
Query: 292 TXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQ-I 350
H I+ + + LI Y + +S+ +F+ I
Sbjct: 387 V--ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCI 444
Query: 351 PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKG-LKPDRVTFLCVLTGCSH 402
++ C+ S+I+GF N L + L + M + L P+ +F VL+ CS
Sbjct: 445 NELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 497
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 260/531 (48%), Gaps = 6/531 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC +K+G + Y+ +SL+ +Y + G++ A +F + ++ L WN ++ + E
Sbjct: 294 IHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDY 353
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
L L+ ++ +V + + +I CS ++ G +H + K T+ + +
Sbjct: 354 GYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST-IES 412
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK-- 181
AL+ YS CGC +A F+++ +D+++W S++S NG F +AL++ M+
Sbjct: 413 ALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSL 472
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
KP N + FG+Q+H +IK G +V V S+LID+Y KCG + A+
Sbjct: 473 KPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL-VLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
+ S+ ++ NS+++ + + ++F LM+ +GI D V+ ++
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
H ++LG SD + +LID Y++ G ++ +F+++ ++ + +
Sbjct: 592 SLLKGKSL--HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLM 649
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
I G+ +G L + + M + G PD VTFL +++ C+HSG VEEG+ +F M+ +G
Sbjct: 650 IYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYG 709
Query: 422 ISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAA 481
I P+ +H++ MV P D +W LL + R H N +G +A
Sbjct: 710 IEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSA 769
Query: 482 KILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ LL ++PE + ++Q+ N Y E G + ++ + + + K+ G S I
Sbjct: 770 EKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWI 820
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 197/427 (46%), Gaps = 16/427 (3%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPE-------RNLATWNLV 54
++H + LG+ ++ +I +SLV +Y++ G +D A+++FD + R++ WN +
Sbjct: 80 KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSM 139
Query: 55 LRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR-GCSNKRFF-DEGSQLHGHVIKV 112
+ G+ + F E +G + + + V + S ++ C F +EG Q+HG +++
Sbjct: 140 IDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN 199
Query: 113 GWVDTNIFVANALVDFYSACGCLSEAKKSFQAIP-MEDVLSWNSMLSVYADNGLFLDALE 171
+DT+ F+ AL+D Y G +A + F I +V+ WN M+ + +G+ +L+
Sbjct: 200 S-LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 172 LLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMY 231
L + + K SF G L S++ N+ FG QIHC V+KMG N +V ++L+ MY
Sbjct: 259 LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP-YVCTSLLSMY 317
Query: 232 GKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFS 291
KCG + A + + + LE N+++ + ++FG M + + D T S
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377
Query: 292 TXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP 351
H K +S ++ +L+ Y + G + VF+ +
Sbjct: 378 N--VISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME 435
Query: 352 LPNVFCFTSIINGFAWNGLGKQCLEMLEAMI--RKGLKPDRVTFLCVLTGCSHSGLVEEG 409
++ + S+I+G NG K+ L++ M LKPD V C+ + G
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 410 RLVFNSM 416
V SM
Sbjct: 496 LQVHGSM 502
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 164/375 (43%), Gaps = 15/375 (4%)
Query: 49 ATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGL-SFCYLIRGCSNKRFFDEGSQLHG 107
A+ N +R + G + + L LY++ + + +F L++ CS G +HG
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 108 HVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSF-------QAIPMEDVLSWNSMLSVY 160
V+ +GW + F+A +LV+ Y CG L A + F + DV WNSM+ Y
Sbjct: 85 SVVVLGW-RYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 161 ADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF--GMQIHCCVIKMGFDN 218
F + + M +G +P S +++ K GN G QIH +++ D
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDT 203
Query: 219 GSVHVQSALIDMYGKCGDIKNAVSTY-ESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGL 277
S +++ALIDMY K G +A + E +++ N ++ GI + +++ L
Sbjct: 204 DSF-LKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML 262
Query: 278 MVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRS 337
+ + L +F+ HC +K+G +D V SL+ Y +
Sbjct: 263 AKNNSVKLVSTSFT--GALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC 320
Query: 338 GHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVL 397
G V ++ VF + + + +++ +A N G L++ M +K + PD T V+
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380
Query: 398 TGCSHSGLVEEGRLV 412
+ CS GL G+ V
Sbjct: 381 SCCSVLGLYNYGKSV 395
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
S+H ++LG + ++ ++L+ +Y++ G A +F ++ ++L TWNL++ G+
Sbjct: 597 KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSH 656
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G L L++E+K + ++F LI C++ F +EG + + + ++ N+
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLSV 159
+VD G L EA +A+P+E D W +LS
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSA 755
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 138/519 (26%), Positives = 253/519 (48%), Gaps = 15/519 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +K+GF + + ++L+ +Y G A +F ++P ++L +WN ++ F G
Sbjct: 283 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 342
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ LGL + +N ++F + C FF++G LHG V+ G N + N
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF-YNQIIGN 401
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
ALV Y G +SE+++ +P DV++WN+++ YA++ AL M+ G
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 461
Query: 184 SIRSFVGFLNLSSKTGNAL-FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
+ + V L+ G+ L G +H ++ GF++ HV+++LI MY KCGD+ ++
Sbjct: 462 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE-HVKNSLITMYAKCGDLSSSQD 520
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+ L ++ N+++ + H G ++V ++ M G+ LD+ +FS
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHV-----LLSQKVFEQIPLPNVFC 357
H A+KLG+E D + + D Y + G + +L V +P N+
Sbjct: 581 LEEGQQL--HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI-- 636
Query: 358 FTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSME 417
+I+ +G ++ M+ G+KP VTF+ +LT CSH GLV++G ++ +
Sbjct: 637 ---LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 693
Query: 418 SLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVG 477
G+ P +H C++ + P + + ++W SLL SC++H N G
Sbjct: 694 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRG 753
Query: 478 RRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKE 516
R+AA+ L L+PED +V++ SN ++ TG +E +++
Sbjct: 754 RKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 792
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 198/408 (48%), Gaps = 5/408 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH K G ++Y+ ++++ LY GL+ + K+F+E+P+RN+ +W ++ G+ + G
Sbjct: 81 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 140
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+E++ +Y ++ + V N S +I C + G Q+ G V+K G +++ + V N
Sbjct: 141 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG-LESKLAVEN 199
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+L+ + G + A F + D +SWNS+ + YA NG ++ + +M+ + +
Sbjct: 200 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 259
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ + L++ + +G IH V+KMGFD+ V V + L+ MY G A
Sbjct: 260 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS-VVCVCNTLLRMYAGAGRSVEANLV 318
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
++ +P L NSLM S ++ G D + M+ G ++ VTF++
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTS--ALAACFTPD 376
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
H + G + + +L+ Y + G + S++V Q+P +V + ++I
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 436
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSG-LVEEGR 410
G+A + + L + M +G+ + +T + VL+ C G L+E G+
Sbjct: 437 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 484
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 203/441 (46%), Gaps = 7/441 (1%)
Query: 26 LYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLS 85
+Y + G + A LFD +P RN +WN ++ G +GL+ E + + ++ ++ +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 86 FCYLIRGCSNK-RFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQA 144
L+ C F EG Q+HG V K G + ++++V+ A++ Y G +S ++K F+
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLL-SDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 145 IPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFG 204
+P +V+SW S++ Y+D G + +++ M+ G + S ++ + G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLH 264
QI V+K G ++ + V+++LI M G G++ A ++ + NS+ +
Sbjct: 180 RQIIGQVVKSGLES-KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 265 CGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDV 324
G +++ F +F LM ++ T ST H +K+G++S V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI--HGLVVKMGFDSVV 296
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK 384
V +L+ Y +G + + VF+Q+P ++ + S++ F +G L +L +MI
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXX 444
G + VTF L C E+GR + + + + G+ ++ + +V
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 445 XXXXXXQTPGRGDCVMWSSLL 465
Q P R D V W++L+
Sbjct: 416 SRRVLLQMP-RRDVVAWNALI 435
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 112/262 (42%), Gaps = 27/262 (10%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H A+KLGF + +I ++ +Y + G I +K+ R+L +WN+++
Sbjct: 585 QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRH 644
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G F+E+ ++E+ ++ ++F L+ CS+ D+G + + + ++ I
Sbjct: 645 GYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEH 704
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLSV--------------------- 159
++D G L+EA+ +PM+ + L W S+L+
Sbjct: 705 CICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLE 764
Query: 160 YADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNG 219
D+ +++ + + W ++R +GF N+ K + ++ +G
Sbjct: 765 PEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIG---D 821
Query: 220 SVHVQSALIDMYGKCGDIKNAV 241
H Q+ +++Y K DIK +
Sbjct: 822 RTHPQT--MEIYAKLEDIKKLI 841
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/532 (27%), Positives = 255/532 (47%), Gaps = 42/532 (7%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRG------- 57
H +K G +L++ + L+ Y ++ D A KLFDE+P RN+ TWN+++ G
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 58 --------FCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHV 109
FC L L+ ++ LD+V SF LIR C++ G QLH +
Sbjct: 119 TNHRAHLGFCYLSRI-----LFTDVSLDHV-----SFMGLIRLCTDSTNMKAGIQLHCLM 168
Query: 110 IKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDA 169
+K G ++++ F + +LV FY CG + EA++ F+A+ D++ WN+++S Y NG+ +A
Sbjct: 169 VKQG-LESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEA 227
Query: 170 LELLYIM-----QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQ 224
LL +M +F G + S + + G QIH + K+ + + V
Sbjct: 228 FGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQ-------GKQIHAILFKVSY-QFDIPVA 279
Query: 225 SALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIG 284
+AL++MY K + +A +ES+ + ++ N+++ G + +FG M+ E +
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 285 LDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQ 344
DE+TF++ K G +SV+ SLI +Y R+G++ +
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQV--QAMVTKKGSADFLSVANSLISSYSRNGNLSEAL 397
Query: 345 KVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSG 404
F I P++ +TS+I A +G ++ L+M E+M++K L+PD++TFL VL+ CSH G
Sbjct: 398 LCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGG 456
Query: 405 LVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSL 464
LV+EG F M + I + +H++C++ P ++
Sbjct: 457 LVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAF 516
Query: 465 LRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKE 516
C +H + AK LL ++P + +SN Y G + + +++
Sbjct: 517 TGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRK 568
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 161/316 (50%), Gaps = 15/316 (4%)
Query: 104 QLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLS--VYA 161
Q HG ++K G + ++F+ N L+ Y+ +A K F +P+ ++++WN ++ +
Sbjct: 57 QEHGFMVKQG-IYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 162 DNGLFLDA-LELLYIMQFWGKKPSIR--SFVGFLNLSSKTGNALFGMQIHCCVIKMGFDN 218
D A L Y+ + S+ SF+G + L + + N G+Q+HC ++K G ++
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLES 175
Query: 219 GSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLM 278
S ++L+ YGKCG I A +E++ L N+L++S + G++D+ F + LM
Sbjct: 176 -SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM 234
Query: 279 VDEGIGL--DEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLR 336
+ D TFS+ H K+ Y+ D+ V+ +L++ Y +
Sbjct: 235 GSDKNRFRGDYFTFSSLLSACRIEQGKQI------HAILFKVSYQFDIPVATALLNMYAK 288
Query: 337 SGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCV 396
S H+ +++ FE + + NV + ++I GFA NG G++ + + M+ + L+PD +TF V
Sbjct: 289 SNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASV 348
Query: 397 LTGCSHSGLVEEGRLV 412
L+ C+ + E + V
Sbjct: 349 LSSCAKFSAIWEIKQV 364
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 145/289 (50%), Gaps = 9/289 (3%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC +K G + + +SLV Y + GLI A ++F+ + +R+L WN ++ + G+
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 64 FDELLGLYNEIKLDNVELNG--LSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
DE GL + D G +F L+ C ++G Q+H + KV + +I V
Sbjct: 224 IDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSY-QFDIPV 278
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
A AL++ Y+ LS+A++ F+++ + +V+SWN+M+ +A NG +A+ L M
Sbjct: 279 ATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENL 338
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
+P +F L+ +K Q+ V K G + V ++LI Y + G++ A+
Sbjct: 339 QPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKG-SADFLSVANSLISSYSRNGNLSEAL 397
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ S+ L S++ +L G ++ +MF M+ + + D++TF
Sbjct: 398 LCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML-QKLQPDKITF 445
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 121/245 (49%), Gaps = 2/245 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H K+ + F++ + ++L+ +Y + + A + F+ + RN+ +WN ++ GF + G
Sbjct: 263 IHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGE 322
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E + L+ ++ L+N++ + L+F ++ C+ E Q+ V K G D + VAN
Sbjct: 323 GREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF-LSVAN 381
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+L+ YS G LSEA F +I D++SW S++ A +G ++L++ M +P
Sbjct: 382 SLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQP 440
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+F+ L+ S G G++ + + + LID+ G+ G I A
Sbjct: 441 DKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDV 500
Query: 244 YESLP 248
S+P
Sbjct: 501 LNSMP 505
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 251/530 (47%), Gaps = 8/530 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +A+ G L +GS++V +Y + ++ A K+FD +PE++ WN ++ G+ + +
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 64 FDELLGLYNEIKLDN-VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+ E + ++ ++ ++ L+ + ++ + + G Q+H K G + +V
Sbjct: 201 YVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD-YVL 259
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
+ YS CG + F+ D++++N+M+ Y NG +L L + G +
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
+ V + +S G+ + IH +K F + + V +AL +Y K +I++A
Sbjct: 320 LRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHA-SVSTALTTVYSKLNEIESARK 375
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
++ P SL N++++ G+ +D +F M + VT +
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGA 435
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H +ES + VS +LI Y + G + ++++F+ + N + ++I
Sbjct: 436 LSLGKWV--HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMI 493
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
+G+ +G G++ L + M+ G+ P VTFLCVL CSH+GLV+EG +FNSM +G
Sbjct: 494 SGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGF 553
Query: 423 SPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAK 482
P H++CMV +W +LL +CR+H++ + R ++
Sbjct: 554 EPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSE 613
Query: 483 ILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
L LDP++ H+ +SN +S + + +++ A RK+ K G++LI
Sbjct: 614 KLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 148/275 (53%), Gaps = 15/275 (5%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
++H +K F + + ++L +Y +L I+ A KLFDE PE++L +WN ++ G+ + G
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
L ++ + L+ E++ N ++ ++ C+ G +H +++ +++I+V+
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDFESSIYVS 458
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
AL+ Y+ CG ++EA++ F + ++ ++WN+M+S Y +G +AL + Y M G
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518
Query: 183 PSIRSFVGFLNLSS-----KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
P+ +F+ L S K G+ +F IH + GF+ SV + ++D+ G+ G +
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIH----RYGFE-PSVKHYACMVDILGRAGHL 573
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLL-HCGIVDDV 271
+ A+ E++ S+E +S+ +LL C I D
Sbjct: 574 QRALQFIEAM---SIEPGSSVWETLLGACRIHKDT 605
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 239/467 (51%), Gaps = 16/467 (3%)
Query: 76 LDNVELNGL-----SFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYS 130
+D+++ +GL ++ LI+ C + R EG+ + H+ G +F+ N L++ Y
Sbjct: 49 MDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM-MFLVNVLINMYV 107
Query: 131 ACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVG 190
L++A + F +P +V+SW +M+S Y+ + ALELL +M +P++ ++
Sbjct: 108 KFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSS 167
Query: 191 FLNLSSKTGNALFGMQ-IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
L ++ N + ++ +HC +IK G ++ V V+SALID++ K G+ ++A+S ++ +
Sbjct: 168 VL----RSCNGMSDVRMLHCGIIKEGLES-DVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 250 TSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXX 309
NS++ D E+F M G ++ T ++
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQA 282
Query: 310 XXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNG 369
H + Y+ D+ ++ +L+D Y + G + + +VF Q+ +V ++++I+G A NG
Sbjct: 283 HVHI----VKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 370 LGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHF 429
++ L++ E M G KP+ +T + VL CSH+GL+E+G F SM+ L+GI P R+H+
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 430 SCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDP 489
CM+ + D V W +LL +CRV RN + AAK ++ LDP
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458
Query: 490 EDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
ED + +SN Y+ + ++++ +I+ R + KE G S I +N
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNK 505
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 5/240 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC IK G ++++ S+L+ ++ +LG + AL +FDE+ + WN ++ GF +
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
D L L+ +K + ++R C+ + G Q H H++K D ++ + N
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK---YDQDLILNN 297
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
ALVD Y CG L +A + F + DV++W++M+S A NG +AL+L M+ G KP
Sbjct: 298 ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKP 357
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKM-GFDNGSVHVQSALIDMYGKCGDIKNAVS 242
+ + VG L S G G + K+ G D H +ID+ GK G + +AV
Sbjct: 358 NYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY-GCMIDLLGKAGKLDDAVK 416
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 145/279 (51%), Gaps = 17/279 (6%)
Query: 17 LYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKL 76
+++ + L+ +Y++ L++ A +LFD++P+RN+ +W ++ + + + + L L +
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 77 DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLS 136
DNV N ++ ++R C+ + LH +IK G +++++FV +AL+D ++ G
Sbjct: 156 DNVRPNVYTYSSVLRSCNG---MSDVRMLHCGIIKEG-LESDVFVRSALIDVFAKLGEPE 211
Query: 137 EAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ---FWGKKPSIRSFVGFLN 193
+A F + D + WNS++ +A N ALEL M+ F ++ ++ S
Sbjct: 212 DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV----- 266
Query: 194 LSSKTGNAL--FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
L + TG AL GMQ H ++K D + + +AL+DMY KCG +++A+ + +
Sbjct: 267 LRACTGLALLELGMQAHVHIVKYDQD---LILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 252 LECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ +++++ L G + ++F M G + +T
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 362
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 260/517 (50%), Gaps = 8/517 (1%)
Query: 19 IGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDN 78
+ ++L+ Y GL++ A LFDE+P+R++ W ++ G+ ++E+
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 79 VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA 138
N + +++ C N + G+ +HG V+K+G ++ +++V NA+++ Y+ C EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLG-MEGSLYVDNAMMNMYATCSVTMEA 165
Query: 139 K-KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSK 197
F+ I +++ ++W ++++ + G + L++ M + + + S+
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 198 TGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNS 257
+ G QIH VIK GF + ++ V ++++D+Y +CG + A + + L N+
Sbjct: 226 IDSVTTGKQIHASVIKRGFQS-NLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 258 LMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIK 317
L++ L + + MF +G + TF++ H +
Sbjct: 285 LISELERSDSSEALL-MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQL--HGRIFR 341
Query: 318 LGYESDVSVSCSLIDAYLRSGHVLLSQKVF-EQIPLPNVFCFTSIINGFAWNGLGKQCLE 376
G+ +V ++ +LID Y + G++ SQ+VF E + N+ +TS++ G+ +G G + +E
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 377 MLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXX 436
+ + M+ G++PDR+ F+ VL+ C H+GLVE+G FN MES +GI+PDRD ++C+V
Sbjct: 402 LFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLL 461
Query: 437 XXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHR-NETVGRRAAKILLGLDPEDFAVH 495
+ P + D W ++L +C+ H+ N + R AA+ ++ L P+ +
Sbjct: 462 GRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTY 521
Query: 496 LQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ +S Y+ G++ +++++ KE G S I
Sbjct: 522 VMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 148/292 (50%), Gaps = 11/292 (3%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGL-IDLALKLFDELPERNLATWNLVLRGFCELG 62
VH +KLG +LY+ ++++ +Y + ++ A +F ++ +N TW ++ GF LG
Sbjct: 133 VHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLG 192
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
L +Y ++ L+N E+ +R ++ G Q+H VIK G+ +N+ V
Sbjct: 193 DGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGF-QSNLPVM 251
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW--- 179
N+++D Y CG LSEAK F + +D+++WN+++S + D+ E L + Q +
Sbjct: 252 NSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS----DSSEALLMFQRFESQ 307
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
G P+ +F + + G Q+H + + GF N +V + +ALIDMY KCG+I +
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF-NKNVELANALIDMYAKCGNIPD 366
Query: 240 AVSTY-ESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ + E + +L S+M G + E+F MV GI D + F
Sbjct: 367 SQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVF 418
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 3/253 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H IK GF NL + +S++ LY R G + A F E+ +++L TWN ++ E
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ER 291
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
E L ++ + N +F L+ C+N + G QLHG + + G+ + N+ +
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF-NKNVEL 350
Query: 122 ANALVDFYSACGCLSEAKKSF-QAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
ANAL+D Y+ CG + ++++ F + + +++SW SM+ Y +G +A+EL M G
Sbjct: 351 ANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG 410
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+P F+ L+ G G++ + N + + ++D+ G+ G I A
Sbjct: 411 IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEA 470
Query: 241 VSTYESLPMTSLE 253
E +P E
Sbjct: 471 YELVERMPFKPDE 483
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 252/532 (47%), Gaps = 5/532 (0%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
++H I G N+ + +SLV Y + ++ A+++ + E+++ W V+ GF
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
E +G + E++ ++ N ++ ++ CS R D G Q+H IKVG+ D+ V
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD-V 362
Query: 122 ANALVDFYSACGCLS-EAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
NALVD Y C EA + F A+ +V+SW +++ D+G D LL M
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+P++ + G L SK + ++IH +++ D G + V ++L+D Y + A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD-GEMVVGNSLVDAYASSRKVDYA 481
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXX 300
+ S+ SL+T G + + M +GI +D+++
Sbjct: 482 WNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLP--GFISASA 539
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
HC ++K G+ SV SL+D Y + G + ++KVFE+I P+V +
Sbjct: 540 NLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNG 599
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLH 420
+++G A NG L E M K +PD VTFL +L+ CS+ L + G F M+ ++
Sbjct: 600 LVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIY 659
Query: 421 GISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRA 480
I P +H+ +V + + +++ +LLR+CR N ++G
Sbjct: 660 NIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDM 719
Query: 481 AKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
A L L P D A+++ +++ Y E+G+ E + + + + ++++K++G S +
Sbjct: 720 ANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTV 771
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 186/399 (46%), Gaps = 6/399 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC IK G NL + ++L+ LY++ I A KLFDE+ R + W +++ F +
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
F L L+ E+ N +F ++R C+ R G ++HG VIK G+ + N V +
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF-EGNSVVGS 163
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+L D YS CG EA + F ++ D +SW M+S + +AL+ M G P
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ +FV L SS G FG IH +I G V ++++L+D Y + +++AV
Sbjct: 224 NEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVV-LKTSLVDFYSQFSKMEDAVRV 281
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
S + S+++ + + F M +GL F+
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM--RSLGLQPNNFTYSAILSLCSAVR 339
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLR-SGHVLLSQKVFEQIPLPNVFCFTSII 362
H IK+G+E V +L+D Y++ S + + +VF + PNV +T++I
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
G +G + C +L M+++ ++P+ VT VL CS
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 122/301 (40%), Gaps = 12/301 (3%)
Query: 197 KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCN 256
++ ++ G+ IHC VIK G ++ + + L+ +Y K I NA ++ + ++
Sbjct: 35 ESNSSRIGLHIHCPVIKFGLLE-NLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWT 93
Query: 257 SLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAI 316
++++ +F M+ G +E TFS+ H I
Sbjct: 94 VMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV--HGSVI 151
Query: 317 KLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLE 376
K G+E + V SL D Y + G + ++F + + +T +I+ ++ L+
Sbjct: 152 KTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQ 211
Query: 377 MLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXX 436
M++ G+ P+ TF+ +L S GL E G+ + +++ + GI P +
Sbjct: 212 FYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNI-IVRGI-PLNVVLKTSLVDF 268
Query: 437 XXXXXXXXXXXXXXQTPGRGDCVMWSSL----LRSCRVHRNETVGRRAAKILLGLDPEDF 492
+ G D +W+S+ +R+ R E VG LGL P +F
Sbjct: 269 YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRA--KEAVGTFLEMRSLGLQPNNF 326
Query: 493 A 493
Sbjct: 327 T 327
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/546 (24%), Positives = 263/546 (48%), Gaps = 26/546 (4%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH R ++ FG + Y+ ++L+ +YM G +++A +FD + R++ +WN ++ G+ G
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
++ L +++ + ++V+L+ + ++ C + + + G +H +++ + I V N
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVH-KLVEEKRLGDKIEVKN 257
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
ALV+ Y CG + EA+ F + DV++W M++ Y ++G +ALEL +MQF G +P
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRP 317
Query: 184 SIRSFVGFLNLSSKTGNALF---GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK-- 238
+ V +L S G+AL G +H ++ + + ++++LI MY KC +
Sbjct: 318 NA---VTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDII-IETSLISMYAKCKRVDLC 373
Query: 239 ----NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXX 294
+ S Y + P +++ + + +V D +F M E + + T ++
Sbjct: 374 FRVFSGASKYHTGPWSAI------IAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLL 427
Query: 295 XXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVF----EQI 350
HC K G+ S + + L+ Y + G + + K+F E+
Sbjct: 428 PAYAALADLRQAMNI--HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKH 485
Query: 351 PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
+V + ++I+G+ +G G L++ M+R G+ P+ +TF L CSHSGLVEEG
Sbjct: 486 KSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGL 545
Query: 411 LVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRV 470
+F M + +H++C+V P +W +LL +C
Sbjct: 546 TLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVT 605
Query: 471 HRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHS 530
H N +G AA L L+PE+ ++ ++N Y+ G ++ +++ + + K+ GHS
Sbjct: 606 HENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHS 665
Query: 531 LIGLNS 536
I + S
Sbjct: 666 TIEIRS 671
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 181/397 (45%), Gaps = 7/397 (1%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
++HC I G + +I S+L Y G I A KLF+E+P+ +L ++N+V+R + G
Sbjct: 36 ALHCHVIT-GGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREG 94
Query: 63 LFDELLGLYNEIKLDNVE--LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
L+ + + ++ + + V+ +G ++ ++ + + G +HG +++ W + +
Sbjct: 95 LYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILR-SWFGRDKY 153
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
V NAL+ Y G + A+ F + DV+SWN+M+S Y NG DAL + M
Sbjct: 154 VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES 213
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+ V L + + G +H V + + + V++AL++MY KCG + A
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGD-KIEVKNALVNMYLKCGRMDEA 272
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXX 300
++ + + ++ G V++ E+ LM EG+ + VT ++
Sbjct: 273 RFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIAS--LVSVCG 330
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
H A++ SD+ + SLI Y + V L +VF + +++
Sbjct: 331 DALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSA 390
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVL 397
II G N L L + + M R+ ++P+ T +L
Sbjct: 391 IIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLL 427
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 148/308 (48%), Gaps = 7/308 (2%)
Query: 105 LHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNG 164
LH HVI G V +I + L Y+ CG ++ A+K F+ +P +LS+N ++ +Y G
Sbjct: 37 LHCHVITGGRVSGHIL--STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREG 94
Query: 165 LFLDALELLYIMQFWGKK--PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVH 222
L+ DA+ + M G K P ++ + + + G+ +H +++ F +
Sbjct: 95 LYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDK-Y 153
Query: 223 VQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG 282
VQ+AL+ MY G ++ A ++ + + N++++ G ++D MF MV+E
Sbjct: 154 VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES 213
Query: 283 IGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLL 342
+ LD T + +LG + V +L++ YL+ G +
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG--DKIEVKNALVNMYLKCGRMDE 271
Query: 343 SQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSH 402
++ VF+++ +V +T +ING+ +G + LE+ M +G++P+ VT +++ C
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 403 SGLVEEGR 410
+ V +G+
Sbjct: 332 ALKVNDGK 339
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 137/294 (46%), Gaps = 6/294 (2%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+VH + G + + ++LV +Y++ G +D A +FD + R++ TW ++ G+ E G
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDG 298
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+ L L ++ + V N ++ L+ C + ++G LHG ++ V ++I +
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR-QQVYSDIIIE 357
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
+L+ Y+ C + + F W+++++ N L DAL L M+ +
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+I + L + + M IHC + K GF S+ + L+ +Y KCG +++A
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGF-MSSLDAATGLVHVYSKCGTLESAHK 476
Query: 243 TY----ESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFST 292
+ E + +L++ G + ++F MV G+ +E+TF++
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTS 530
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 237/495 (47%), Gaps = 28/495 (5%)
Query: 51 WNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVI 110
WN+ LR LF E + LY + + SF ++++ C++ G QLH HV
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 111 KVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLS--WNSMLSVYADNGLFLD 168
K G +T FV AL+ Y CG +++A+K F+ P LS +N+++S Y N D
Sbjct: 81 K-GGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 169 ALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALI 228
A + M+ G + +G + L + G +H +K G D+ V V ++ I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS-EVAVLNSFI 198
Query: 229 DMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEV 288
MY KCG ++ ++ +P+ L N++++ G+ DV E++ M G+ D
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 289 TFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYE-----------SDVSVSCSLIDAYLRS 337
T + H A K+G+E +V VS + I Y R
Sbjct: 259 TLVSVLSSCA-------------HLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARC 305
Query: 338 GHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVL 397
G++ ++ VF+ +P+ ++ +T++I + +G+G+ L + + MI++G++PD F+ VL
Sbjct: 306 GNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVL 365
Query: 398 TGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGD 457
+ CSHSGL ++G +F +M+ + + P +H+SC+V P D
Sbjct: 366 SACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPD 425
Query: 458 CVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEI 517
+W +LL +C++H+N + A ++ +P + ++ +SN YS++ E +I+ +
Sbjct: 426 GAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVM 485
Query: 518 AIARKMTKEIGHSLI 532
R K+ G+S +
Sbjct: 486 MRERAFRKKPGYSYV 500
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 144/291 (49%), Gaps = 4/291 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLAT--WNLVLRGFC 59
+HC K G ++ ++L+ +Y + GL+ A K+F+E P+ + + +N ++ G+
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 60 ELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNI 119
+ ++ +K V ++ ++ L+ C+ + G LHG +K G +D+ +
Sbjct: 133 ANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK-GGLDSEV 191
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
V N+ + Y CG + ++ F +P++ +++WN+++S Y+ NGL D LEL M+
Sbjct: 192 AVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSS 251
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
G P + V L+ + G G ++ V GF +V V +A I MY +CG++
Sbjct: 252 GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGF-VPNVFVSNASISMYARCGNLAK 310
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
A + ++ +P+ SL +++ G+ + +F M+ GI D F
Sbjct: 311 ARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVF 361
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 132/249 (53%), Gaps = 3/249 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
S+H + +K G + + +S + +YM+ G ++ +LFDE+P + L TWN V+ G+ +
Sbjct: 176 RSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQN 235
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
GL ++L LY ++K V + + ++ C++ G ++ V G+V N+FV
Sbjct: 236 GLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV-PNVFV 294
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
+NA + Y+ CG L++A+ F +P++ ++SW +M+ Y +G+ L L M G
Sbjct: 295 SNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI 354
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIK-MGFDNGSVHVQSALIDMYGKCGDIKNA 240
+P FV L+ S +G G+++ + + + G H S L+D+ G+ G + A
Sbjct: 355 RPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHY-SCLVDLLGRAGRLDEA 413
Query: 241 VSTYESLPM 249
+ ES+P+
Sbjct: 414 MEFIESMPV 422
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 142/523 (27%), Positives = 257/523 (49%), Gaps = 12/523 (2%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
N++ + +V Y + I +A +LFDE+P+ + ++N ++ G+ + + L+ ++
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
E++G + LI C ++ D QLH + G+ D+ V NA V +YS G L
Sbjct: 133 KLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGF-DSYSSVNNAFVTYYSKGGLL 189
Query: 136 SEAKKSFQAI-PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL 194
EA F + + D +SWNSM+ Y + AL L M F G K + + LN
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 195 SSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGD---IKNAVSTYESLPMTS 251
+ + + G Q H +IK GF S HV S LID Y KCG + ++ ++ +
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNS-HVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 252 LECCNSLMTSL-LHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXX 310
L N++++ ++ + ++ + F M G D+ +F
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSF--VCVTSACSNLSSPSQCKQ 366
Query: 311 XHCCAIKLGYESD-VSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNG 369
H AIK S+ +SV+ +LI Y +SG++ ++ VF+++P N F +I G+A +G
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 370 LGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHF 429
G + L + + M+ G+ P+++TF+ VL+ C+H G V+EG+ FN+M+ I P+ +H+
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 430 SCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDP 489
SCM+ P + V W++LL +CR H+N + RAA L+ + P
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQP 546
Query: 490 EDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
++ ++N Y++ ++E +++ +++ K+ G S I
Sbjct: 547 LAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 144/294 (48%), Gaps = 6/294 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPE-RNLATWNLVLRGFCE 60
+HC ++ GF + ++ V Y + GL+ A+ +F + E R+ +WN ++ + +
Sbjct: 158 KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQ 217
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
+ L LY E+ +++ + ++ ++ G Q HG +IK G+ N
Sbjct: 218 HKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF-HQNSH 276
Query: 121 VANALVDFYSACG---CLSEAKKSFQAIPMEDVLSWNSMLSVYADN-GLFLDALELLYIM 176
V + L+DFYS CG + +++K FQ I D++ WN+M+S Y+ N L +A++ M
Sbjct: 277 VGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM 336
Query: 177 QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGD 236
Q G +P SFV + S + QIH IK + + V +ALI +Y K G+
Sbjct: 337 QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGN 396
Query: 237 IKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+++A ++ +P + N ++ G + ++ M+D GI +++TF
Sbjct: 397 LQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITF 450
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 154/359 (42%), Gaps = 51/359 (14%)
Query: 116 DTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYI 175
+ N+F N +V Y+ + A++ F IP D +S+N+++S YAD A+ L
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 176 MQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCG 235
M+ G + + G + + + Q+HC + GFD+ S V +A + Y K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYS-SVNNAFVTYYSKGG 187
Query: 236 DIKNAVSTYESLPMTSLECC-NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXX 294
++ AVS + + E NS++ + ++ M+ +G +D T ++
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS-- 245
Query: 295 XXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSG---HVLLSQKVFEQIP 351
H IK G+ + V LID Y + G + S+KVF++I
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 352 LPNVFCFTSIINGFAWN-GLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSH-------- 402
P++ + ++I+G++ N L ++ ++ M R G +PD +F+CV + CS+
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 403 ----------------------------SGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
SG +++ R VF+ M L+ +S F+CM+
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS-----FNCMI 419
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 4/248 (1%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGLID---LALKLFDELPERNLATWNLVLRGFC-E 60
H + IK GF N ++GS L+ Y + G D + K+F E+ +L WN ++ G+
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMN 322
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
L +E + + +++ + SF + CSN + Q+HG IK I
Sbjct: 323 EELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS 382
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
V NAL+ Y G L +A+ F +P + +S+N M+ YA +G +AL L M G
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
P+ +FV L+ + G G + + + S +ID+ G+ G ++ A
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Query: 241 VSTYESLP 248
+++P
Sbjct: 503 ERFIDAMP 510
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/555 (27%), Positives = 263/555 (47%), Gaps = 28/555 (5%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+H A+K F + + ++ + +Y + + A LFD N ++N ++ G+ +
Sbjct: 260 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEE 319
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+ L L++ + + + +S + R C+ + EG Q++G IK + ++ VA
Sbjct: 320 HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS-LSLDVCVA 378
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
NA +D Y C L+EA + F + D +SWN++++ + NG + L L M +
Sbjct: 379 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE 438
Query: 183 PSIRSFVGFLNLSSKTGNAL-FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
P +F L + TG +L +GM+IH ++K G + S V +LIDMY KCG I+ A
Sbjct: 439 PDEFTFGSILK--ACTGGSLGYGMEIHSSIVKSGMASNS-SVGCSLIDMYSKCGMIEEAE 495
Query: 242 STYE--------SLPMTSLE------------CCNSLMTSLLHCGIVDDVFEMFGLMVDE 281
+ S M LE NS+++ + +D +F M++
Sbjct: 496 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 555
Query: 282 GIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVL 341
GI D+ T++T H IK +SDV + +L+D Y + G +
Sbjct: 556 GITPDKFTYATVLDTCANLASAGLGKQI--HAQVIKKELQSDVYICSTLVDMYSKCGDLH 613
Query: 342 LSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
S+ +FE+ + + ++I G+A +G G++ +++ E MI + +KP+ VTF+ +L C+
Sbjct: 614 DSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACA 673
Query: 402 HSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMW 461
H GL+++G F M+ +G+ P H+S MV + P D V+W
Sbjct: 674 HMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIW 733
Query: 462 SSLLRSCRVHRNET-VGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIA 520
+LL C +HRN V A LL LDP+D + + +SN Y++ G +E ++
Sbjct: 734 RTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG 793
Query: 521 RKMTKEIGHSLIGLN 535
K+ KE G S + L
Sbjct: 794 FKLKKEPGCSWVELK 808
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 182/384 (47%), Gaps = 14/384 (3%)
Query: 36 ALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSN 95
A F+ +P R++ +WN +L G+ + G + + ++ ++ + +E +G +F +++ CS
Sbjct: 91 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 150
Query: 96 KRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNS 155
G Q+HG V++VG DT++ A+AL+D Y+ E+ + FQ IP ++ +SW++
Sbjct: 151 LEDTSLGMQIHGIVVRVG-CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSA 209
Query: 156 MLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMG 215
+++ N L AL+ MQ S + L + G Q+H +K
Sbjct: 210 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 269
Query: 216 FDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMF 275
F + V++A +DMY KC ++++A +++ + + N+++T +F
Sbjct: 270 FAADGI-VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLF 328
Query: 276 GLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYL 335
++ G+G DE++ S + AIK DV V+ + ID Y
Sbjct: 329 HRLMSSGLGFDEISLSG--VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 386
Query: 336 RSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLC 395
+ + + +VF+++ + + +II NG G + L + +M+R ++PD TF
Sbjct: 387 KCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGS 446
Query: 396 VLTGCS----------HSGLVEEG 409
+L C+ HS +V+ G
Sbjct: 447 ILKACTGGSLGYGMEIHSSIVKSG 470
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 176/420 (41%), Gaps = 25/420 (5%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+H +++G ++ S+L+ +Y + +L++F +PE+N +W+ ++ G +
Sbjct: 159 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 218
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
L L + E++ N ++ + ++R C+ G QLH H +K + I V
Sbjct: 219 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI-VR 277
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
A +D Y+ C + +A+ F + S+N+M++ Y+ AL L + + G
Sbjct: 278 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 337
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
S G + G+QI+ IK + V V +A IDMYGKC + A
Sbjct: 338 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL-SLDVCVANAAIDMYGKCQALAEAFR 396
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
++ + N+++ + G + +F M+ I DE TF +
Sbjct: 397 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGS---ILKACTG 453
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKV----FEQIPLPNVF-- 356
H +K G S+ SV CSLID Y + G + ++K+ F++ +
Sbjct: 454 GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEE 513
Query: 357 --------------CFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSH 402
+ SII+G+ + + M+ G+ PD+ T+ VL C++
Sbjct: 514 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 573
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 3/291 (1%)
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
N +++ YS + +A F +P+ DV+SWNSMLS Y NG L ++E+ M G +
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
R+F L + S + GMQIH V+++G D V SAL+DMY K ++
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVV-AASALLDMYAKGKRFVESLR 194
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
++ +P + ++++ + ++ + F M G+ + +++
Sbjct: 195 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H A+K + +D V + +D Y + ++ +Q +F+ N + ++I
Sbjct: 255 LRLGGQLHAH--ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 312
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVF 413
G++ G + L + ++ GL D ++ V C+ + EG ++
Sbjct: 313 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 363
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/525 (26%), Positives = 257/525 (48%), Gaps = 11/525 (2%)
Query: 13 FGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYN 72
G +LY+GSSL+ +Y++ G + AL++FDEL + ++ TW+ ++ GF + G + + +
Sbjct: 73 LGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFR 132
Query: 73 EIKL-DNVELNGLSFCYLIRGC---SNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDF 128
+ + +V + ++ L+ C SN R G +HG VI+ G+ ++ + N+L++
Sbjct: 133 RMVMASDVTPDRVTLITLVSACTKLSNSRL---GRCVHGFVIRRGF-SNDLSLVNSLLNC 188
Query: 129 YSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSF 188
Y+ EA F+ I +DV+SW+++++ Y NG +AL + M G +P++ +
Sbjct: 189 YAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATV 248
Query: 189 VGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
+ L + + G + H I+ G + V V +AL+DMY KC + A + + +P
Sbjct: 249 LCVLQACAAAHDLEQGRKTHELAIRKGLET-EVKVSTALVDMYMKCFSPEEAYAVFSRIP 307
Query: 249 MTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXX 308
+ +L++ G+ E F +M+ E +
Sbjct: 308 RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL-MVKVLGSCSELGFLEQA 366
Query: 309 XXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWN 368
H IK G++S+ + SL++ Y R G + + KVF I L + +TS+I G+ +
Sbjct: 367 KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIH 426
Query: 369 GLGKQCLEMLEAMIRKG-LKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRD 427
G G + LE M++ +KP+ VTFL +L+ CSH+GL+ EG +F M + + ++P+ +
Sbjct: 427 GKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLE 486
Query: 428 HFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGL 487
H++ +V + P + +LL +CR+H+N + AK L L
Sbjct: 487 HYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFEL 546
Query: 488 DPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ ++ +SN Y GE+E +++ R + K + SLI
Sbjct: 547 ESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLI 591
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 175/370 (47%), Gaps = 5/370 (1%)
Query: 43 LPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEG 102
+ +R+L WN +L+ ++E+L ++ + D + + + ++ C R + G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 103 SQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYAD 162
+HG V K + ++++V ++L+ Y CG + EA + F + D+++W+SM+S +
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 163 NGLFLDALELLYIMQFWGK-KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSV 221
NG A+E M P + + ++ +K N+ G +H VI+ GF N +
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSN-DL 179
Query: 222 HVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDE 281
+ ++L++ Y K K AV+ ++ + + ++++ + G + +F M+D+
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 239
Query: 282 GIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVL 341
G + T H AI+ G E++V VS +L+D Y++
Sbjct: 240 GTEPNVAT--VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE 297
Query: 342 LSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAM-IRKGLKPDRVTFLCVLTGC 400
+ VF +IP +V + ++I+GF NG+ + +E M + +PD + + VL C
Sbjct: 298 EAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSC 357
Query: 401 SHSGLVEEGR 410
S G +E+ +
Sbjct: 358 SELGFLEQAK 367
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 4/289 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH I+ GF +L + +SL+ Y + A+ LF + E+++ +W+ V+ + + G
Sbjct: 166 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 225
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E L ++N++ D E N + +++ C+ ++G + H I+ G ++T + V+
Sbjct: 226 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG-LETEVKVST 284
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK-K 182
ALVD Y C EA F IP +DV+SW +++S + NG+ ++E IM +
Sbjct: 285 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 344
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P V L S+ G H VIK GFD+ + ++L+++Y +CG + NA
Sbjct: 345 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPF-IGASLVELYSRCGSLGNASK 403
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG-IGLDEVTF 290
+ + + SL+T G E F MV + +EVTF
Sbjct: 404 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTF 452
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 254/496 (51%), Gaps = 4/496 (0%)
Query: 20 GSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNV 79
S ++ +Y L L+ AL LF L + W V+R F + LF + L + E++
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101
Query: 80 ELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
+ F +++ C+ G +HG ++++G +D +++ NAL++ Y+ + +
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG-MDCDLYTGNALMNMYAKLLGMDSVR 160
Query: 140 KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
+ F+ +P +DV+S+N++++ YA +G++ DAL ++ M KP + L + S+
Sbjct: 161 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 220
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLM 259
+ + G +IH VI+ G D+ V++ S+L+DMY K I+++ + L NSL+
Sbjct: 221 DVIKGKEIHGYVIRKGIDS-DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 279
Query: 260 TSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLG 319
+ G ++ +F MV + V FS+ H ++ G
Sbjct: 280 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL--HGYVLRGG 337
Query: 320 YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLE 379
+ S++ ++ +L+D Y + G++ ++K+F+++ + + +T+II G A +G G + + + E
Sbjct: 338 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFE 397
Query: 380 AMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXX 439
M R+G+KP++V F+ VLT CSH GLV+E FNSM ++G++ + +H++ +
Sbjct: 398 EMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRA 457
Query: 440 XXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVS 499
+ +WS+LL SC VH+N + + A+ + +D E+ ++ +
Sbjct: 458 GKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMC 517
Query: 500 NFYSETGEFEASMQIK 515
N Y+ G ++ +++
Sbjct: 518 NMYASNGRWKEMAKLR 533
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 158/289 (54%), Gaps = 4/289 (1%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
SVH ++LG +LY G++L+ +Y +L +D ++F+ +P +++ ++N ++ G+ + G
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 185
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
++++ L + E+ +++ + + ++ S +G ++HG+VI+ G +D+++++
Sbjct: 186 MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG-IDSDVYIG 244
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
++LVD Y+ + ++++ F + D +SWNS+++ Y NG + +AL L M K
Sbjct: 245 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 304
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P +F + + G Q+H V++ GF ++ + SAL+DMY KCG+IK A
Sbjct: 305 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF-GSNIFIASALVDMYSKCGNIKAARK 363
Query: 243 TYESLP-MTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
++ + + + +M LH G + +F M +G+ ++V F
Sbjct: 364 IFDRMNVLDEVSWTAIIMGHALH-GHGHEAVSLFEEMKRQGVKPNQVAF 411
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 139/260 (53%), Gaps = 4/260 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H I+ G ++YIGSSLV +Y + I+ + ++F L R+ +WN ++ G+ + G
Sbjct: 228 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 287
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
++E L L+ ++ V+ ++F +I C++ G QLHG+V++ G+ +NIF+A+
Sbjct: 288 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF-GSNIFIAS 346
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
ALVD YS CG + A+K F + + D +SW +++ +A +G +A+ L M+ G KP
Sbjct: 347 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 406
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ +FV L S G + K+ N + +A+ D+ G+ G ++ A
Sbjct: 407 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA--- 463
Query: 244 YESLPMTSLECCNSLMTSLL 263
Y + +E S+ ++LL
Sbjct: 464 YNFISKMCVEPTGSVWSTLL 483
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 5/322 (1%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
LI+ + + + QLH I+ + A+ ++ Y+ L EA F+ +
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQSLSHT--SASIVISIYTNLKLLHEALLLFKTLKSP 68
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
VL+W S++ + D LF AL M+ G+ P F L + + FG +H
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
++++G D ++ +AL++MY K + + +E +P + N+++ G+
Sbjct: 129 GFIVRLGMD-CDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 187
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
+D M M + D T S+ H I+ G +SDV +
Sbjct: 188 EDALRMVREMGTTDLKPDSFTLSS--VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS 245
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
SL+D Y +S + S++VF ++ + + S++ G+ NG + L + M+ +KP
Sbjct: 246 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 305
Query: 389 DRVTFLCVLTGCSHSGLVEEGR 410
V F V+ C+H + G+
Sbjct: 306 GAVAFSSVIPACAHLATLHLGK 327
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 264/538 (49%), Gaps = 9/538 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+S++ + IKLG+ N+ + +S++G+Y G ++ A ++FD + R+ WN ++ G +
Sbjct: 219 SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
++ L + + + V+ ++ ++ GCS + G +H +I V ++ +
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARII-VSDSLADLPL 337
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLY--IMQFW 179
NAL+D Y +CG + EA F I +++SWNS++S ++NG A+ L+Y +++
Sbjct: 338 DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAM-LMYRRLLRMS 396
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
+P +F ++ +++ + G +H V K+G++ SV V + L+ MY K + ++
Sbjct: 397 TPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYER-SVFVGTTLLSMYFKNREAES 455
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
A ++ + + ++ G + + F M E D FS
Sbjct: 456 AQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSD--GFSLSSVIGAC 513
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFT 359
HC AI+ G++ +SV +L+D Y ++G ++ +F P++ C+
Sbjct: 514 SDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWN 573
Query: 360 SIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESL 419
S++ ++ +G+ ++ L E ++ G PD VT+L +L CSH G +G+ ++N M+
Sbjct: 574 SMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE- 632
Query: 420 HGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQT-PGRGDCVMWSSLLRSCRVHRNETVGR 478
GI H+SCMV Q+ PG +W +LL +C RN +G
Sbjct: 633 QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGL 692
Query: 479 RAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
AA+ +L LDPED A H+ +SN Y+ G +E +++ +K+ G S I +N+
Sbjct: 693 YAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNN 750
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 188/420 (44%), Gaps = 29/420 (6%)
Query: 18 YIGSSLVGLYMRLGLIDLALKLFDELPERNLAT-------WNLVLRG------FCELGLF 64
Y ++L+ +Y+R ++ A K+FD++P+RN+ T + V G +LG F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 65 DELLGL-YNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGW--VDTNIFV 121
+ + NEI VEL R C + Q+H V+ G + +
Sbjct: 83 QMIFFMPLNEIASSVVELT--------RKCVSITVLKRARQIHALVLTAGAGAATESPYA 134
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLD-ALELLYIMQFWG 180
N L+ Y CG L +A+K F +P +V+S+N++ S Y+ N F A L M F
Sbjct: 135 NNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY 194
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
KP+ +F + + + + L G ++ +IK+G+ + V VQ++++ MY CGD+++A
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVV-VQTSVLGMYSSCGDLESA 253
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXX 300
++ + N+++ L ++D F M+ G+ D F+
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGV--DPTQFTYSIVLNGCS 311
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
H I +D+ + +L+D Y G + + VF +I PN+ + S
Sbjct: 312 KLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNS 371
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGL-KPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESL 419
II+G + NG G+Q + M ++R +PD TF ++ + G+L+ + L
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKL 431
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 145/575 (25%), Positives = 257/575 (44%), Gaps = 46/575 (8%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
S H ++ GF N+++G++LV +Y R + A K+FDE+ ++ +WN ++ + +LG
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 63 LFDELLGLYNEIKLD-NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
L +++ + + + ++ ++ C++ G QLH + + N+FV
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFV 266
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ---- 177
N LVD Y+ CG + EA F + ++DV+SWN+M++ Y+ G F DA+ L MQ
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 178 -----FW--------------------------GKKPSIRSFVGFLNLSSKTGNALFGMQ 206
W G KP+ + + L+ + G + G +
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 207 IHCCVIKMGFD---NG---SVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCN--SL 258
IHC IK D NG V + LIDMY KC + A + ++SL + +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 259 MTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKL 318
+ G + E+ M +E F+ H A++
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 319 GYES-DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEM 377
+ + VS LID Y + G + ++ VF+ + N +TS++ G+ +G G++ L +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566
Query: 378 LEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXX 437
+ M R G K D VT L VL CSHSG++++G FN M+++ G+SP +H++C+V
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 438 XXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQ 497
+ P V+W + L CR+H +G AA+ + L +
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686
Query: 498 VSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+SN Y+ G ++ +I+ + + + K G S +
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 189/450 (42%), Gaps = 50/450 (11%)
Query: 11 LGFG-FNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLAT--WNLVLRGFCELGLFDEL 67
L FG L + S L+ Y+ +G + A+ L P + WN ++R + + G ++
Sbjct: 52 LSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKC 111
Query: 68 LGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVD 127
L L+ + + + +F ++ + C G H + G++ +N+FV NALV
Sbjct: 112 LYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI-SNVFVGNALVA 170
Query: 128 FYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM-QFWGKKPSIR 186
YS C LS+A+K F + + DV+SWNS++ YA G ALE+ M +G +P
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI 230
Query: 187 SFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYES 246
+ V L + G G Q+HC + ++ V + L+DMY KCG + A + + +
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCGMMDEANTVFSN 289
Query: 247 LPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX------- 299
+ + + N+++ G +D +F M +E I +D VT+S
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349
Query: 300 --------------------------XXXXXXXXXXXXHCCAIKL-------GYESDVSV 326
HC AIK G+ + V
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 327 SCSLIDAYLRSGHVLLSQKVFEQIPLP--NVFCFTSIINGFAWNGLGKQCLEMLEAMIRK 384
LID Y + V ++ +F+ + +V +T +I G++ +G + LE+L M +
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 385 G--LKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+P+ T C L C+ + G+ +
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQI 499
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 9/324 (2%)
Query: 105 LHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMED--VLSWNSMLSVYAD 162
+H ++ G + N+ + L+ Y + GCLS A + P D V WNS++ Y D
Sbjct: 47 IHQKLLSFGILTLNL--TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGD 104
Query: 163 NGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVH 222
NG L L +M P +F + + G H + GF + +V
Sbjct: 105 NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFIS-NVF 163
Query: 223 VQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDE- 281
V +AL+ MY +C + +A ++ + + + NS++ S G EMF M +E
Sbjct: 164 VGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF 223
Query: 282 GIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVL 341
G D +T HC A+ ++ V L+D Y + G +
Sbjct: 224 GCRPDNITL--VNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMD 281
Query: 342 LSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
+ VF + + +V + +++ G++ G + + + E M + +K D VT+ ++G +
Sbjct: 282 EANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYA 341
Query: 402 HSGLVEEGRLVFNSMESLHGISPD 425
GL E V M S GI P+
Sbjct: 342 QRGLGYEALGVCRQMLS-SGIKPN 364
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/520 (27%), Positives = 257/520 (49%), Gaps = 7/520 (1%)
Query: 20 GSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNV 79
G+SLV +Y + GL+ A+ +F ER++ +N ++ GF G + + Y E++ + +
Sbjct: 99 GTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGI 157
Query: 80 ELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
+ +F L++G S+ + ++HG K+G+ D++ +V + LV YS + +A+
Sbjct: 158 LPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGF-DSDCYVGSGLVTSYSKFMSVEDAQ 215
Query: 140 KSFQAIP-MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKT 198
K F +P +D + WN++++ Y+ F DAL + M+ G S + L+ + +
Sbjct: 216 KVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVS 275
Query: 199 GNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSL 258
G+ G IH +K G + V +ALIDMYGK ++ A S +E++ L NS+
Sbjct: 276 GDIDNGRSIHGLAVKTG-SGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSV 334
Query: 259 MTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKL 318
+ +CG D +F M+ GI D VT +T + L
Sbjct: 335 LCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGL 394
Query: 319 --GYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLE 376
S+ + SL+D Y++ G + ++ VF+ + + + + +ING+ G+ L+
Sbjct: 395 LNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALD 454
Query: 377 MLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXX 436
M M R G+KPD +TF+ +L CSHSG + EGR ME+++ I P DH++C++
Sbjct: 455 MFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDML 514
Query: 437 XXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHL 496
P + V+W S+L SCR+H N+ + A K L L+PE ++
Sbjct: 515 GRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYV 574
Query: 497 QVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
+SN Y E G++E + +++ + + K G S I L +
Sbjct: 575 LMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKN 614
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 152/293 (51%), Gaps = 9/293 (3%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLAT-WNLVLRGFCELG 62
VH A KLGF + Y+GS LV Y + ++ A K+FDELP+R+ + WN ++ G+ ++
Sbjct: 182 VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIF 241
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
F++ L ++++++ + V ++ + ++ + D G +HG +K G ++I V+
Sbjct: 242 RFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTG-SGSDIVVS 300
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
NAL+D Y L EA F+A+ D+ +WNS+L V+ G L L M G +
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDN---GSVHVQSALIDMYGKCGDIKN 239
P I + L + + G +IH +I G N + + ++L+DMY KCGD+++
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 240 AVSTYESLPMTSLECCNSLMT--SLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
A ++S+ + N ++ + CG + +MF M G+ DE+TF
Sbjct: 421 ARMVFDSMRVKDSASWNIMINGYGVQSCGEL--ALDMFSCMCRAGVKPDEITF 471
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 151/328 (46%), Gaps = 6/328 (1%)
Query: 90 IRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMED 149
++ C+ ++ + G Q+HG +++ G++D + +LV+ Y+ CG + A F D
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERD 125
Query: 150 VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHC 209
V +N+++S + NG LDA+E M+ G P +F L S + ++H
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHG 184
Query: 210 CVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC-NSLMTSLLHCGIV 268
K+GFD+ +V S L+ Y K +++A ++ LP N+L+
Sbjct: 185 LAFKLGFDS-DCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
+D +F M +EG+G+ T ++ H A+K G SD+ VS
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITS--VLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSN 301
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
+LID Y +S + + +FE + ++F + S++ + G L + E M+ G++P
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRP 361
Query: 389 DRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
D VT VL C + +GR + M
Sbjct: 362 DIVTLTTVLPTCGRLASLRQGREIHGYM 389
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 127/258 (49%), Gaps = 19/258 (7%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVL--RGFCE 60
S+H A+K G G ++ + ++L+ +Y + ++ A +F+ + ER+L TWN VL +C
Sbjct: 283 SIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYC- 341
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVD---T 117
G D L L+ + + + ++ ++ C +G ++HG++I G ++ +
Sbjct: 342 -GDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSS 400
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
N F+ N+L+D Y CG L +A+ F ++ ++D SWN M++ Y AL++ M
Sbjct: 401 NEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMC 460
Query: 178 FWGKKPSIRSFVGFLNLSSKTG------NALFGMQIHCCVIKMGFDNGSVHVQSALIDMY 231
G KP +FVG L S +G N L M+ ++ S H + +IDM
Sbjct: 461 RAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPT-----SDHY-ACVIDML 514
Query: 232 GKCGDIKNAVSTYESLPM 249
G+ ++ A S P+
Sbjct: 515 GRADKLEEAYELAISKPI 532
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 113/241 (46%), Gaps = 12/241 (4%)
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
++ + + L ++ + + G QIH +++ GF + S ++L++MY KCG ++ AV
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+ + N+L++ + G D E + M GI D+ TF +
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPS---LLKGSDAM 174
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP-LPNVFCFTSII 362
H A KLG++SD V L+ +Y + V +QKVF+++P + + +++
Sbjct: 175 ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALV 234
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
NG++ + L + M +G+ R T VL+ + SG ++ GR S+HG+
Sbjct: 235 NGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGR-------SIHGL 287
Query: 423 S 423
+
Sbjct: 288 A 288
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 250/518 (48%), Gaps = 15/518 (2%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
++L+ Y + GL+D A+ LF +P+ N+ +WN ++ GF + G L ++ + +
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLV 235
Query: 81 LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKK 140
L+G + ++ CS G QLH V+K G ++++ F +AL+D YS CG L A
Sbjct: 236 LDGFALPCGLKACSFGGLLTMGKQLHCCVVKSG-LESSPFAISALIDMYSNCGSLIYAAD 294
Query: 141 SFQAIPM---EDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFV--GFLNLS 195
F + V WNSMLS + N AL LL +Q + S+ G L +
Sbjct: 295 VFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLL--LQIYQSDLCFDSYTLSGALKIC 352
Query: 196 SKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC 255
N G+Q+H V+ G++ + V S L+D++ G+I++A + LP +
Sbjct: 353 INYVNLRLGLQVHSLVVVSGYELDYI-VGSILVDLHANVGNIQDAHKLFHRLPNKDIIAF 411
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
+ L+ + G F +F ++ +GLD F H
Sbjct: 412 SGLIRGCVKSGFNSLAFYLFRELIK--LGLDADQFIVSNILKVCSSLASLGWGKQIHGLC 469
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCL 375
IK GYES+ + +L+D Y++ G + +F+ + +V +T II GF NG ++
Sbjct: 470 IKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAF 529
Query: 376 EMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXX 435
MI G++P++VTFL +L+ C HSGL+EE R +M+S +G+ P +H+ C+V
Sbjct: 530 RYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDL 589
Query: 436 XXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVH 495
+ P D +W+SLL +C H+N + A+ LL P+D +V+
Sbjct: 590 LGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVY 649
Query: 496 LQVSNFYSETGEFEASMQIKEIAIARKM-TKEIGHSLI 532
+SN Y+ G ++ +++E A+K+ KE G S I
Sbjct: 650 TSLSNAYATLGMWDQLSKVRE--AAKKLGAKESGMSWI 685
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 191/438 (43%), Gaps = 48/438 (10%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
S+ IK G N++I ++++ +Y+ L+ A K+FDE+ ERN+ TW ++ G+ G
Sbjct: 26 SIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDG 85
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCY--LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
++ + LY + LD+ E F Y +++ C G ++ + K + ++
Sbjct: 86 KPNKAIELYRRM-LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKEN-LRGDVV 143
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
+ N++VD Y G L EA SF+ I SWN+++S Y GL +A+ L + M
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM---- 199
Query: 181 KKPSIRSF----VGFLNLSSKT----------------GNAL--------------FGMQ 206
+P++ S+ GF++ S G AL G Q
Sbjct: 200 PQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQ 259
Query: 207 IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTY--ESLPM-TSLECCNSLMTSLL 263
+HCCV+K G ++ + SALIDMY CG + A + E L + +S+ NS+++ L
Sbjct: 260 LHCCVVKSGLESSPFAI-SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 264 HCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESD 323
+ + + + D T S H + GYE D
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSG--ALKICINYVNLRLGLQVHSLVVVSGYELD 376
Query: 324 VSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIR 383
V L+D + G++ + K+F ++P ++ F+ +I G +G + +I+
Sbjct: 377 YIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
Query: 384 KGLKPDRVTFLCVLTGCS 401
GL D+ +L CS
Sbjct: 437 LGLDADQFIVSNILKVCS 454
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 182/444 (40%), Gaps = 48/444 (10%)
Query: 90 IRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMED 149
+R C + F G + HVIK G + N+F+AN ++ Y LS+A K F + +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQG-ISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERN 70
Query: 150 VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFV--GFLNLSSKTGNALFGMQI 207
+++W +M+S Y +G A+EL Y ++ + F+ L G+ G+ +
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIEL-YRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILV 129
Query: 208 HCCVIKMGFDN--GSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
+ ++G +N G V + ++++DMY K G + A S+++ + S N+L++
Sbjct: 130 YE---RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 266 GIVDDVFEMFGLM---------------VD---------------EGIGLDEVTFSTXXX 295
G++D+ +F M VD EG+ LD F+
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLD--GFALPCG 244
Query: 296 XXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP-- 353
HCC +K G ES +LID Y G ++ + VF Q L
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 354 -NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+V + S+++GF N + L +L + + L D T L C + + G L
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLG-LQ 363
Query: 413 FNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHR 472
+S+ + G D S +V + P + D + +S L+R C
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVKSG 422
Query: 473 NETVGRRAAK--ILLGLDPEDFAV 494
++ + I LGLD + F V
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIV 446
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 1/197 (0%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
VH + G+ + +GS LV L+ +G I A KLF LP +++ ++ ++RG + G
Sbjct: 363 QVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG 422
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
L+ E+ ++ + +++ CS+ G Q+HG IK G+ ++ A
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGY-ESEPVTA 481
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
ALVD Y CG + F + DV+SW ++ + NG +A + M G +
Sbjct: 482 TALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIE 541
Query: 183 PSIRSFVGFLNLSSKTG 199
P+ +F+G L+ +G
Sbjct: 542 PNKVTFLGLLSACRHSG 558
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/534 (26%), Positives = 261/534 (48%), Gaps = 17/534 (3%)
Query: 9 IKLGFGF--NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDE 66
+KLG + +L++ SS + +Y LG I+ + ++FD ERN+ WN ++ + + E
Sbjct: 241 LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVE 300
Query: 67 LLGLYNE-IKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANAL 125
+ L+ E I + + +++ S + + G Q HG V K + + I + N+L
Sbjct: 301 SIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK-NFRELPIVIVNSL 359
Query: 126 VDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSI 185
+ YS CG + ++ F ++ DV+SWN+M+S + NGL + L L+Y MQ G K
Sbjct: 360 MVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDY 419
Query: 186 RSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYE 245
+ L+ +S N G Q H +I+ G ++ S LIDMY K G I+ + +E
Sbjct: 420 ITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMN--SYLIDMYSKSGLIRISQKLFE 477
Query: 246 SLPMTSLECC--NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+ NS+++ G + F +F M+++ I + VT ++
Sbjct: 478 GSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSV 537
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
H +I+ + +V V+ +L+D Y ++G + ++ +F Q N +T++I
Sbjct: 538 DLGKQL--HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL 595
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
G+ +G+G++ + + +M G+KPD +TF+ VL+ CS+SGL++EG +F M ++ I
Sbjct: 596 GYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQ 655
Query: 424 PDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCV-MWSSLLRSCRVHRN----ETVGR 478
P +H+ C+ G+ +W SLL SC++H ETV
Sbjct: 656 PSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSE 715
Query: 479 RAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
R AK G + + V L SN Y+E ++++ +++ + + KE+G S I
Sbjct: 716 RLAKFDKGKNFSGYEVLL--SNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 203/436 (46%), Gaps = 29/436 (6%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMR-LGL-----IDLALKLFDELPERNLATWNLVL 55
+VHC I+ + + +SL+ +Y+ L D+ K+FD + +N+ WN ++
Sbjct: 127 KAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLI 186
Query: 56 RGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVG-- 113
+ + G E + + V+ + +SF + S R + + +G ++K+G
Sbjct: 187 SWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDE 246
Query: 114 WVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL 173
+V ++FV ++ + Y+ G + +++ F + ++ WN+M+ VY N ++++EL
Sbjct: 247 YVK-DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF 305
Query: 174 YIMQFWGKKPSIRSFVGFLNLSSKTGNAL----FGMQIHCCVIKMGFDNGSVHVQSALID 229
++ G K + V +L L++ +AL G Q H V K F + + ++L+
Sbjct: 306 --LEAIGSKEIVSDEVTYL-LAASAVSALQQVELGRQFHGFVSK-NFRELPIVIVNSLMV 361
Query: 230 MYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVT 289
MY +CG + + + S+ + N+++++ + G+ D+ + M +G +D +T
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 290 FSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFE- 348
+ H I+ G + + ++ LID Y +SG + +SQK+FE
Sbjct: 422 VTA--LLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEG 478
Query: 349 -QIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVE 407
+ + S+I+G+ NG ++ + M+ + ++P+ VT +L CS G V+
Sbjct: 479 SGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVD 538
Query: 408 EGRLVFNSMESLHGIS 423
G+ LHG S
Sbjct: 539 LGK-------QLHGFS 547
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 175/387 (45%), Gaps = 23/387 (5%)
Query: 31 GLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCY-- 88
G LA +LFD +P+ WN ++ GF L E L Y+ +K N ++ Y
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSAC----GCLSE--AKKSF 142
++ C+ + G +H H+I+ +++ V N+L++ Y +C C +K F
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRC-LQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVF 171
Query: 143 QAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGF-----LNLSSK 197
+ ++V++WN+++S Y G +A IM KPS SFV ++ S K
Sbjct: 172 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 198 TGNALFGMQIHCCVIKMGFDN-GSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCN 256
N +G+ ++K+G + + V S+ I MY + GDI+++ ++S ++E N
Sbjct: 232 KANVFYGL-----MLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWN 286
Query: 257 SLMTSLLHCGIVDDVFEMFGLMV-DEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
+++ + + + E+F + + I DEVT+ H
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTY--LLAASAVSALQQVELGRQFHGFV 344
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCL 375
K E + + SL+ Y R G V S VF + +V + ++I+ F NGL + L
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 376 EMLEAMIRKGLKPDRVTFLCVLTGCSH 402
++ M ++G K D +T +L+ S+
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASN 431
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +I+ N+++ S+LV +Y + G I A +F + ERN T+ ++ G+ + G+
Sbjct: 543 LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGM 602
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ + L+ ++ ++ + ++F ++ CS DEG ++ + +V + +
Sbjct: 603 GERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYC 662
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLS--WNSML 157
+ D G ++EA + + + E ++ W S+L
Sbjct: 663 CITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLL 698
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/577 (25%), Positives = 261/577 (45%), Gaps = 62/577 (10%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLY 71
GF N +G+S V Y + G + A +FDE+P+R++ W ++ G + G + LG
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 72 NEIKLDNVELNGLSFCYL---IRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDF 128
++ +++ + L + CSN EG LHG +K G + FV +++ F
Sbjct: 216 CKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSK-FVQSSMFSF 274
Query: 129 YSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK------ 182
YS G SEA SF+ + ED+ SW S+++ A +G ++ ++ + MQ G
Sbjct: 275 YSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVI 334
Query: 183 -------------PSIRSFVG--------------FLNLSSK------------------ 197
P ++F G L+++ K
Sbjct: 335 SCLINELGKMMLVPQGKAFHGTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTML 394
Query: 198 --TGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC 255
G L G +HC V+K D ++ V ++LID+YGK GD+ A + T++
Sbjct: 395 KGYGAVLLGKSLHCYVVKTSLDL-TISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITW 452
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
N+++ S +HC + +F MV E +T T H
Sbjct: 453 NAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMI--HRYI 510
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCL 375
+ +E ++S+S +LID Y + GH+ S+++F+ + C+ +I+G+ +G + +
Sbjct: 511 TETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAI 570
Query: 376 EMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXX 435
+ + M +KP TFL +L+ C+H+GLVE+G+ +F M + + P+ H+SC+V
Sbjct: 571 ALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDL 629
Query: 436 XXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVH 495
P D V+W +LL SC H +G R A+ + DP++ +
Sbjct: 630 LSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYY 689
Query: 496 LQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ ++N YS G++E + + +E+ + K GHS++
Sbjct: 690 IMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 726
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 4/286 (1%)
Query: 9 IKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELL 68
I G N+++ S L+ Y G +L+ ++F + R++ WN +++ G + L
Sbjct: 51 ITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSL 110
Query: 69 GLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDF 128
+ + L + + ++ C+ +F G+ +HG V+K G D N V + V F
Sbjct: 111 CFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYF 170
Query: 129 YSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK---KPSI 185
YS CG L +A F +P DV++W +++S + NG L L M G KP+
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 186 RSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYE 245
R+ S G G +H +K G + S VQS++ Y K G+ A ++
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLAS-SKFVQSSMFSFYSKSGNPSEAYLSFR 289
Query: 246 SLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFS 291
L + S++ SL G +++ F+MF M ++G+ D V S
Sbjct: 290 ELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVIS 335
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 142/290 (48%), Gaps = 16/290 (5%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
S+HC +K + + +SL+ LY ++G + +A ++F E + N+ TWN ++ +
Sbjct: 404 KSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHC 462
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
++ + L++ + +N + + ++ L+ C N + G +H ++ + + N+ +
Sbjct: 463 EQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH-EMNLSL 521
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
+ AL+D Y+ CG L ++++ F A +D + WN M+S Y +G A+ L M+
Sbjct: 522 SAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDV 581
Query: 182 KPSIRSFVGFLNLSS-----KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGD 236
KP+ +F+ L+ + + G LF +++H +K + S L+D+ + G+
Sbjct: 582 KPTGPTFLALLSACTHAGLVEQGKKLF-LKMHQYDVKPNLKH-----YSCLVDLLSRSGN 635
Query: 237 IKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLD 286
++ A ST S+P + + +LL + FEM M + + D
Sbjct: 636 LEEAESTVMSMPFSP---DGVIWGTLLSSCMTHGEFEMGIRMAERAVASD 682
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 5/313 (1%)
Query: 101 EGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVY 160
E + H +I G + NIFVA+ L+ Y++ G + + + F + D+ WNS++ +
Sbjct: 41 ESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAH 100
Query: 161 ADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF--GMQIHCCVIKMGFDN 218
NG + +L + M G+ P F + +S+ F G +H V+K G +
Sbjct: 101 FSNGDYARSLCFFFSMLLSGQSPD--HFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFD 158
Query: 219 GSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLM 278
+ V ++ + Y KCG +++A ++ +P + ++++ + G + M
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 279 VDEGIGLDEVTFSTXX-XXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRS 337
G +D+ T H A+K G S V S+ Y +S
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 338 GHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVL 397
G+ + F ++ ++F +TSII A +G ++ +M M KG+ PD V C++
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 398 TGCSHSGLVEEGR 410
LV +G+
Sbjct: 339 NELGKMMLVPQGK 351
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 212/419 (50%), Gaps = 4/419 (0%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
L+ C + +++G ++ G+ + ++ N ++ + CG + +A++ F IP
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGF-EPEQYMMNRILLMHVKCGMIIDARRLFDEIPER 187
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
++ S+ S++S + + G +++A EL +M +F L S+ G+ G Q+H
Sbjct: 188 NLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLH 247
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
C +K+G + + V LIDMY KCGDI++A +E +P + N+++ G
Sbjct: 248 VCALKLGVVDNTF-VSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYS 306
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
++ + M D G+ +D+ T S H I+ G+ES++ +
Sbjct: 307 EEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQA--HASLIRNGFESEIVANT 364
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
+L+D Y + G V ++ VF+++P N+ + +++ G+A +G G +++ E MI + P
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 389 DRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXX 448
+ VTFL VL+ C++SGL E+G +F SM +HGI P H++CM+
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAF 484
Query: 449 XXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGE 507
+ P + MW++LL +CR+ N +GR A+ L G+ PE ++ + N Y+ G+
Sbjct: 485 IRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGK 543
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 147/279 (52%), Gaps = 2/279 (0%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLY 71
GF Y+ + ++ ++++ G+I A +LFDE+PERNL ++ ++ GF G + E L+
Sbjct: 153 GFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELF 212
Query: 72 NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSA 131
+ + + +F ++R + G QLH +K+G VD N FV+ L+D YS
Sbjct: 213 KMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVD-NTFVSCGLIDMYSK 271
Query: 132 CGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGF 191
CG + +A+ +F+ +P + ++WN++++ YA +G +AL LLY M+ G +
Sbjct: 272 CGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIM 331
Query: 192 LNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
+ +S+K Q H +I+ GF++ V +AL+D Y K G + A ++ LP +
Sbjct: 332 IRISTKLAKLELTKQAHASLIRNGFESEIV-ANTALVDFYSKWGRVDTARYVFDKLPRKN 390
Query: 252 LECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ N+LM + G D ++F M+ + + VTF
Sbjct: 391 IISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTF 429
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 129/251 (51%), Gaps = 3/251 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H A+KLG N ++ L+ +Y + G I+ A F+ +PE+ WN V+ G+
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G +E L L +++ V ++ + +IR + + Q H +I+ G+ ++ I
Sbjct: 304 GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF-ESEIVA 362
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
ALVDFYS G + A+ F +P ++++SWN+++ YA++G DA++L M
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKM-GFDNGSVHVQSALIDMYGKCGDIKNA 240
P+ +F+ L+ + +G + G +I + ++ G ++H + +I++ G+ G + A
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHY-ACMIELLGRDGLLDEA 481
Query: 241 VSTYESLPMTS 251
++ P+ +
Sbjct: 482 IAFIRRAPLKT 492
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
H I+ GF + ++LV Y + G +D A +FD+LP +N+ +WN ++ G+
Sbjct: 345 KQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANH 404
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G + + L+ ++ NV N ++F ++ C+ ++G ++ + +V +
Sbjct: 405 GRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMH 464
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLS-WNSMLSV 159
+++ G L EA + P++ ++ W ++L+
Sbjct: 465 YACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA 503
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 250/531 (47%), Gaps = 11/531 (2%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGL-IDLALKLFDELPERNLATWNLVLRGFCELGL 63
H +K G + +G+SL+ LY +LG + ++FD ++ +W ++ G+
Sbjct: 84 HAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKE 143
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ L ++ E+ ++ N + ++ CS G HG VI G+ + N F+++
Sbjct: 144 HVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGF-EWNHFISS 202
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW-GKK 182
L Y +A++ F +P DV+ W ++LS ++ N L+ +AL L Y M G
Sbjct: 203 TLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLV 262
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P +F L G +IH +I G + V V+S+L+DMYGKCG ++ A
Sbjct: 263 PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV-VESSLLDMYGKCGSVREARQ 321
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+ + + ++L+ G + E+F M ++ D F T
Sbjct: 322 VFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAA 377
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H ++ G +V V +LID Y +SG + + +V+ ++ + N+ + +++
Sbjct: 378 VRLGKEI--HGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAML 435
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
+ A NG G++ + M++KG+KPD ++F+ +LT C H+G+V+EGR F M +GI
Sbjct: 436 SALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGI 495
Query: 423 SPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNET-VGRRAA 481
P +H+SCM+ + R D +W LL C + + + V R A
Sbjct: 496 KPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIA 555
Query: 482 KILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
K ++ L+P+ ++ +SN Y G ++ I+++ + R + K +G S I
Sbjct: 556 KRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 123/243 (50%), Gaps = 7/243 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + I G G N+ + SSL+ +Y + G + A ++F+ + ++N +W+ +L G+C+ G
Sbjct: 287 IHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGE 346
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
++ + ++ E++ E + F +++ C+ G ++HG ++ G N+ V +
Sbjct: 347 HEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG-NVIVES 401
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
AL+D Y GC+ A + + + + ++++WN+MLS A NG +A+ M G KP
Sbjct: 402 ALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKP 461
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIK-MGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
SF+ L TG G + K G G+ H S +ID+ G+ G + A +
Sbjct: 462 DYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY-SCMIDLLGRAGLFEEAEN 520
Query: 243 TYE 245
E
Sbjct: 521 LLE 523
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 153/358 (42%), Gaps = 12/358 (3%)
Query: 58 FCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDT 117
C+LG E + + N + + L++ C+ F G Q H HV+K G ++T
Sbjct: 36 LCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSG-LET 94
Query: 118 NIFVANALVDFYSACGC-LSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM 176
+ V N+L+ Y G + E ++ F ++D +SW SM+S Y + ALE+ M
Sbjct: 95 DRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM 154
Query: 177 QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGD 236
+G + + + S+ G G H VI GF+ + S L +YG +
Sbjct: 155 VSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHF-ISSTLAYLYGVNRE 213
Query: 237 IKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGL--DEVTFSTXX 294
+A ++ +P + C +++++ + ++ +F M G GL D TF T
Sbjct: 214 PVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAM-HRGKGLVPDGSTFGT-- 270
Query: 295 XXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPN 354
H I G S+V V SL+D Y + G V +++VF + N
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 355 VFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+++++ G+ NG ++ +E+ M K D F VL C+ V G+ +
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEI 384
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + ++ G N+ + S+L+ LY + G ID A +++ ++ RN+ TWN +L + G
Sbjct: 384 IHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGR 443
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+E + +N++ ++ + +SF ++ C + DEG + K + +
Sbjct: 444 GEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYS 503
Query: 124 ALVDFYSACGCLSEAKKSFQ-AIPMEDVLSWNSMLSVYADNG 164
++D G EA+ + A D W +L A N
Sbjct: 504 CMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANA 545
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 251/538 (46%), Gaps = 12/538 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSS----LVGLYMRLGLIDLALKLFDELPERNLATWNLVLRG 57
+H I G NL GSS L+ R+G I A K+FDELP+R ++ +N ++
Sbjct: 34 TQIHAFVISTG---NLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVV 90
Query: 58 FCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDT 117
+ DE+L LY+++ + ++ + +F I+ C + ++G + + G+
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGY-KN 149
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
++FV +++++ Y CG + EA+ F + DV+ W +M++ +A G L A+E MQ
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
G +G L S G+ G +H + + G V V+++L+DMY K G I
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVV-VETSLVDMYAKVGFI 268
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXX 297
+ A + + + SL++ G+ + FE M G D VT
Sbjct: 269 EVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTL--VGVLV 326
Query: 298 XXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC 357
HC +K + D + +L+D Y + G + S+++FE + ++ C
Sbjct: 327 ACSQVGSLKTGRLVHCYILKR-HVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVC 385
Query: 358 FTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSME 417
+ ++I+ + +G G++ + + M ++PD TF +L+ SHSGLVE+G+ F+ M
Sbjct: 386 WNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMI 445
Query: 418 SLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVG 477
+ + I P H+ C++ +W +LL C HRN +VG
Sbjct: 446 NKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVG 505
Query: 478 RRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
AA +L L+P+ + VSNF++ +++ +++++ M K G+S I +N
Sbjct: 506 DIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVN 563
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/568 (26%), Positives = 260/568 (45%), Gaps = 45/568 (7%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH + ++ GF Y G+ + LY + G + AL+LFD++P++N TWN+ L+G + G
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 64 FDELLGLYNEIKLD-----NVELNGLSFC----YLIRGCSNKRFFD-------------- 100
+ L L++E+ N ++GL C Y IR FFD
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIR-----VFFDMQRWEIRPTEFTFS 140
Query: 101 ----------EGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDV 150
G Q+HG+ I G N+ V N+++D Y G A F + DV
Sbjct: 141 ILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDV 200
Query: 151 LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCC 210
+SWN ++ +D+G AL+ ++M+ +P + +++ S G Q
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL 260
Query: 211 VIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSL-LHCGIVD 269
IKMGF + S+ V A IDM+ KC + ++V + L CNS++ S HC +
Sbjct: 261 CIKMGFLSNSI-VLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHC-CGE 318
Query: 270 DVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCS 329
D +F L + + + D+ TFS+ H IKLG++ D +V+ S
Sbjct: 319 DALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADV---HSLVIKLGFDLDTAVATS 375
Query: 330 LIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEML-EAMIRKGLKP 388
L++ Y ++G V L+ VF + ++ + ++I G A N + L + + ++ + LKP
Sbjct: 376 LMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKP 435
Query: 389 DRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXX 448
DRVT + +L C ++G V EG +F+SME HG++P +H++C++
Sbjct: 436 DRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDI 495
Query: 449 XXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEF 508
+ P +W +L + + + AK +L +P+ +L + Y T +
Sbjct: 496 ADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRW 555
Query: 509 EASMQIKEIAIARKMTKEIGHSLIGLNS 536
E S++++ K+ G S I + S
Sbjct: 556 ENSVKLRYAMNEHKLKSAQGSSKISIES 583
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 209/429 (48%), Gaps = 3/429 (0%)
Query: 104 QLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADN 163
Q H H++K G +D++ FV N+L+ YS+ G A + F +DV++W +M+ + N
Sbjct: 124 QFHAHIVKFG-LDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 164 GLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHV 223
G +A+ M+ G + + V L + K + FG +H ++ G V +
Sbjct: 183 GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 224 QSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGI 283
S+L+DMYGKC +A ++ +P ++ +L+ + D +F M+ +
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Query: 284 GLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLS 343
+E T S+ HC IK E + + +LID Y++ G + +
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRV--HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 360
Query: 344 QKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHS 403
VFE++ NV+ +T++INGFA +G + ++ M+ + P+ VTF+ VL+ C+H
Sbjct: 361 ILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHG 420
Query: 404 GLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSS 463
GLVEEGR +F SM+ + P DH++CMV + P V+W +
Sbjct: 421 GLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA 480
Query: 464 LLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKM 523
L SC +H++ +G+ AA ++ L P + ++N YSE+ ++ ++++ +++
Sbjct: 481 LFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQV 540
Query: 524 TKEIGHSLI 532
K G S I
Sbjct: 541 VKSPGFSWI 549
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 139/286 (48%), Gaps = 1/286 (0%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLF 64
H +K G + ++ +SL+ Y GL D A +LFD ++++ TW ++ GF G
Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSA 185
Query: 65 DELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANA 124
E + + E+K V N ++ +++ G +HG ++ G V ++F+ ++
Sbjct: 186 SEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSS 245
Query: 125 LVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPS 184
LVD Y C C +A+K F +P +V++W ++++ Y + F + + M P+
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPN 305
Query: 185 IRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTY 244
++ L+ + G G ++HC +IK + + + LID+Y KCG ++ A+ +
Sbjct: 306 EKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTT-AGTTLIDLYVKCGCLEEAILVF 364
Query: 245 ESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
E L ++ +++ G D F++F M+ + +EVTF
Sbjct: 365 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTF 410
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VHC IK N G++L+ LY++ G ++ A+ +F+ L E+N+ TW ++ GF G
Sbjct: 328 VHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGY 387
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ L+ + +V N ++F ++ C++ +EG +L + ++
Sbjct: 388 ARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYA 447
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDV-LSWNSML 157
+VD + G L EAK + +PME + W ++
Sbjct: 448 CMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 144/548 (26%), Positives = 247/548 (45%), Gaps = 31/548 (5%)
Query: 4 VHCRAIK-LGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
VH R +K L ++ + L+ +Y +L + A + P RN+ +W ++ G + G
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNG 87
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
F L + E++ + V N +F + ++ R G Q+H +K G + ++FV
Sbjct: 88 HFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI-LDVFVG 146
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
+ D Y +A+K F IP ++ +WN+ +S +G +A+E +
Sbjct: 147 CSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH 206
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI----- 237
P+ +F FLN S + GMQ+H V++ GFD V V + LID YGKC I
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT-DVSVCNGLIDFYGKCKQIRSSEI 265
Query: 238 -------KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
KNAVS + SL ++ S+L+ D+ E M+ +
Sbjct: 266 IFTEMGTKNAVS-WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLS------ 318
Query: 291 STXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQI 350
H A+K E + V +L+D Y + G + S++ F+++
Sbjct: 319 -------ACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 351 PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKG--LKPDRVTFLCVLTGCSHSGLVEE 408
P N+ S+I G+A G L + E M +G P+ +TF+ +L+ CS +G VE
Sbjct: 372 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVEN 431
Query: 409 GRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSC 468
G +F+SM S +GI P +H+SC+V + P + +W +L +C
Sbjct: 432 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 491
Query: 469 RVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIG 528
R+H +G AA+ L LDP+D H+ +SN ++ G + + ++E + K G
Sbjct: 492 RMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAG 551
Query: 529 HSLIGLNS 536
+S I + +
Sbjct: 552 YSWITVKN 559
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 145/287 (50%), Gaps = 10/287 (3%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H A+K G ++++G S +Y + L D A KLFDE+PERNL TWN +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G E + + E + + N ++FC + CS+ + G QLHG V++ G+ DT++ V
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF-DTDVSV 246
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
N L+DFY C + ++ F + ++ +SW S+++ Y N E ++ +
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN----HEDEKASVLYLRSR 302
Query: 182 KPSIRS--FVGFLNLSSKTGNA--LFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
K + + F+ LS+ G A G IH +K + ++ V SAL+DMYGKCG I
Sbjct: 303 KDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER-TIFVGSALVDMYGKCGCI 361
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIG 284
+++ ++ +P +L NSL+ H G VD +F M G G
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
S+H A+K +++GS+LV +Y + G I+ + + FDE+PE+NL T N ++ G+ G
Sbjct: 331 SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 390
Query: 63 LFDELLGLYNEIKLD--NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
D L L+ E+ N ++F L+ CS + G ++ + ++
Sbjct: 391 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAE 450
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLS-WNSM 156
+ +VD G + A + + +P++ +S W ++
Sbjct: 451 HYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 2/199 (1%)
Query: 203 FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSL 262
G +H ++K + + LI+MY K ++A P ++ SL++ L
Sbjct: 24 LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83
Query: 263 LHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYES 322
G F M EG+ ++ TF H A+K G
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI--HALAVKCGRIL 141
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
DV V CS D Y ++ ++K+F++IP N+ + + I+ +G ++ +E
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 383 RKGLKPDRVTFLCVLTGCS 401
R P+ +TF L CS
Sbjct: 202 RIDGHPNSITFCAFLNACS 220
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 258/524 (49%), Gaps = 9/524 (1%)
Query: 13 FGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYN 72
F ++Y+ ++LV Y + G +++A+K+FDE+P+R++ WN ++ GF +++GL+
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 73 EIK-LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSA 131
+++ +D + N + + EG +HG+ ++G+ + ++ V ++D Y+
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN-DLVVKTGILDVYAK 252
Query: 132 CGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSF-VG 190
C+ A++ F ++ ++W++M+ Y +N + +A E+ + M + +G
Sbjct: 253 SKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIG 312
Query: 191 FLNLS-SKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
+ + ++ G+ G +HC +K GF + VQ+ +I Y K G + +A + + +
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFIL-DLTVQNTIISFYAKYGSLCDAFRQFSEIGL 371
Query: 250 TSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXX 309
+ NSL+T + ++ F +F M GI D T
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431
Query: 310 XXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNG 369
+C + GY + S+ +L+D Y + G + ++++VF+ + ++ + +++ GF +G
Sbjct: 432 HGYC--VVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 370 LGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM-ESLHGISPDRDH 428
LGK+ L + +M G+ PD VT L +L+ CSHSGLV+EG+ +FNSM + P DH
Sbjct: 490 LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDH 549
Query: 429 FSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLD 488
++CM + P D + +LL +C ++N +G +K + L
Sbjct: 550 YNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLG 609
Query: 489 PEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
++ L +SN YS +E + +I+ I R + K G+S +
Sbjct: 610 ETTESLVL-LSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 186/392 (47%), Gaps = 7/392 (1%)
Query: 22 SLVGLYMRLGLIDLALKLFDELPER--NLATWNLVLRGFCELGLFDELLGLYNEIKLDNV 79
+L LY ++LA +FDE+P N W+L++R + ++ L LY ++ V
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV 99
Query: 80 ELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
++ ++++ C+ R D+G +H HV T+++V ALVDFY+ CG L A
Sbjct: 100 RPTKYTYPFVLKACAGLRAIDDGKLIHSHV-NCSDFATDMYVCTALVDFYAKCGELEMAI 158
Query: 140 KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM-QFWGKKPSIRSFVGFLNLSSKT 198
K F +P D+++WN+M+S ++ + D + L M + G P++ + VG +
Sbjct: 159 KVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRA 218
Query: 199 GNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSL 258
G G +H +MGF N V V++ ++D+Y K I A ++ + +++
Sbjct: 219 GALREGKAVHGYCTRMGFSNDLV-VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAM 277
Query: 259 MTSLLHCGIVDDVFEM-FGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIK 317
+ + ++ + E+ F ++V++ + + + HC A+K
Sbjct: 278 IGGYVENEMIKEAGEVFFQMLVNDNVAM-VTPVAIGLILMGCARFGDLSGGRCVHCYAVK 336
Query: 318 LGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEM 377
G+ D++V ++I Y + G + + + F +I L +V + S+I G N ++ +
Sbjct: 337 AGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRL 396
Query: 378 LEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
M G++PD T L VLT CSH + G
Sbjct: 397 FHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 145/291 (49%), Gaps = 4/291 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+VH ++GF +L + + ++ +Y + I A ++FD ++N TW+ ++ G+ E
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 62 GLFDELLGLYNEIKL-DNVEL-NGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNI 119
+ E ++ ++ + DNV + ++ ++ GC+ G +H + +K G++ ++
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFI-LDL 343
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
V N ++ FY+ G L +A + F I ++DV+S+NS+++ N ++ L + M+
Sbjct: 344 TVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTS 403
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
G +P I + +G L S G H + G+ + + +AL+DMY KCG +
Sbjct: 404 GIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNT-SICNALMDMYTKCGKLDV 462
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
A ++++ + N+++ G+ + +F M + G+ DEVT
Sbjct: 463 AKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTL 513
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 147/336 (43%), Gaps = 16/336 (4%)
Query: 86 FCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAI 145
F L+ C R G +H H++K ++ V L Y++C + A+ F I
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 146 PMEDV--LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF 203
P + ++W+ M+ YA N AL+L Y M G +P+ ++ L +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 204 GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSL- 262
G IH V F ++V +AL+D Y KCG+++ A+ ++ +P + N++++
Sbjct: 122 GKLIHSHVNCSDFAT-DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 263 LHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYES 322
LHC + D + + +G+ + T +C ++G+ +
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYC--TRMGFSN 238
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
D+ V ++D Y +S ++ +++VF+ N ++++I G+ N + K+ E+ M
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM- 297
Query: 383 RKGLKPDRVTFLC------VLTGCSHSGLVEEGRLV 412
L D V + +L GC+ G + GR V
Sbjct: 298 ---LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCV 330
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+S H + G+ N I ++L+ +Y + G +D+A ++FD + +R++ +WN +L GF
Sbjct: 429 SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIH 488
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGW-VDTNIF 120
GL E L L+N ++ V + ++ ++ CS+ DEG QL + + + V I
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID 548
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLS 158
N + D + G L EA +P E D+ ++LS
Sbjct: 549 HYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLS 587
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 249/533 (46%), Gaps = 6/533 (1%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
SVH + + F + + +SL+ +Y + G + + ++F+++ ++N +W ++ +
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 282
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
++ L ++E+ +E N ++ ++ C EG +HG ++ ++
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 342
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
ALV+ Y+ CG LS+ + + + ++++WNS++S+YA G+ + AL L M K
Sbjct: 343 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P + ++ G G QIH VI+ D VQ++LIDMY K G + +A +
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRT--DVSDEFVQNSLIDMYSKSGSVDSAST 460
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+ + S+ NS++ G + +F M + ++EVTF
Sbjct: 461 VFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTF--LAVIQACSSI 518
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H I G + D+ +LID Y + G + ++ VF + ++ ++S+I
Sbjct: 519 GSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMI 577
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
N + +G + M+ G KP+ V F+ VL+ C HSG VEEG+ FN M+S G+
Sbjct: 578 NAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSF-GV 636
Query: 423 SPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAK 482
SP+ +HF+C + + P D +W SL+ CR+H+ + +
Sbjct: 637 SPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKN 696
Query: 483 ILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
L + +D + +SN Y+E GE+E +++ + + K G+S I ++
Sbjct: 697 DLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEID 749
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 190/413 (46%), Gaps = 4/413 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH R IK G + I +SL+ +Y + G + A K+FD +P R+L W+ ++ E G
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ L ++ + D VE + ++ ++ GC+ +HG + + D + + N
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR-KMFDLDETLCN 241
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+L+ YS CG L +++ F+ I ++ +SW +M+S Y AL M G +P
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
++ + L+ G G +H ++ D + AL+++Y +CG + + +
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETV 361
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+ ++ NSL++ H G+V +F MV + I D T ++
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
H + SD V SLID Y +SG V + VF QI +V + S++
Sbjct: 422 PLGKQIHGHVIRTDV---SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 478
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
GF+ NG + + + + M L+ + VTFL V+ CS G +E+G+ V + +
Sbjct: 479 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL 531
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 180/394 (45%), Gaps = 6/394 (1%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
+ L+ Y +G D + +F+ P + + ++++ L D + LY+ + + +
Sbjct: 38 TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQ 97
Query: 81 LNGLSFCYLIRGCSNKR-FFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
++ F ++R C+ R G ++HG +IK G VD + + +L+ Y G LS+A+
Sbjct: 98 ISKFVFPSVLRACAGSREHLSVGGKVHGRIIK-GGVDDDAVIETSLLCMYGQTGNLSDAE 156
Query: 140 KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
K F +P+ D+++W++++S +NG + AL + M G +P + + + ++ G
Sbjct: 157 KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLM 259
+H + + FD S L+ MY KCGD+ ++ +E + + +++
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNS-LLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMI 275
Query: 260 TSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLG 319
+S + F M+ GI + VT + H A++
Sbjct: 276 SSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYS--VLSSCGLIGLIREGKSVHGFAVRRE 333
Query: 320 YESDV-SVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEML 378
+ + S+S +L++ Y G + + V + N+ + S+I+ +A G+ Q L +
Sbjct: 334 LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLF 393
Query: 379 EAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
M+ + +KPD T ++ C ++GLV G+ +
Sbjct: 394 RQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 161/340 (47%), Gaps = 14/340 (4%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
L R CS+ R SQLH H++ G + + L++ Y+ G ++ F+A P
Sbjct: 7 LFRSCSSLRLV---SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNAL-FGMQI 207
D + ++ L A++L + + + S F L + + L G ++
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 208 HCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGI 267
H +IK G D+ +V ++++L+ MYG+ G++ +A ++ +P+ L ++L++S L G
Sbjct: 124 HGRIIKGGVDDDAV-IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 268 VDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVS 327
V MF MVD+G+ D VT + H + ++ D ++
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMIS--VVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240
Query: 328 CSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLK 387
SL+ Y + G +L S+++FE+I N +T++I+ + ++ L MI+ G++
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 388 PDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRD 427
P+ VT VL+ C GL+ EG+ S+HG + R+
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGK-------SVHGFAVRRE 333
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 140/528 (26%), Positives = 255/528 (48%), Gaps = 17/528 (3%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
SVH A K G + + ++L+ Y + + A LF E+ +++ +WN ++ + + G
Sbjct: 62 SVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 121
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
L +E + ++ + NVE++ ++ L+ + LH V+K G V+ +I V
Sbjct: 122 LQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHE------PLHCLVVKCGMVN-DISVV 174
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
+LV YS CGCL A++ + + + ++ S++S YA+ G A+ + K
Sbjct: 175 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 234
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
+ VG L+ K+ + GM +H IK G ++ V + LI MY K D++ +
Sbjct: 235 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTL-VVNGLITMYSKFDDVETVLF 293
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMF-GLMVDEGIGLDEVTFSTXXXXXXXXX 301
+E L T L NS+++ + G FE+F +M+ G+ D +T ++
Sbjct: 294 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 353
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
H ++ +E++ V +LID Y + G+ + ++ VF+ I P + S+
Sbjct: 354 CLNLGKEL--HGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSM 411
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
I+G++ +GL + L M KGLKPD +TFL VL+ C+H G V+EG++ F +M G
Sbjct: 412 ISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFG 471
Query: 422 ISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAA 481
ISP H++ MV + + D +W +LL +C +HR VG A
Sbjct: 472 ISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVA 531
Query: 482 KILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGH 529
+ + LD ++ +++ +SN Y+ ++ ++ R M K+ G+
Sbjct: 532 RKMFMLDYKNGGLYVLMSNLYATEAMWD------DVVRVRNMMKDNGY 573
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 154/361 (42%), Gaps = 11/361 (3%)
Query: 43 LPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEG 102
+PER+ WN ++ G+ G + L+ + + + L+ C F +G
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 103 SQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYAD 162
+HG K G ++ + V NAL+ FYS C L A+ F+ + + +SWN+M+ Y+
Sbjct: 61 RSVHGVAAKSG-LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQ 119
Query: 163 NGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVH 222
+GL +A+ + M + K I S V +NL S + +HC V+K G N +
Sbjct: 120 SGLQEEAITVFKNM--FEKNVEI-SPVTIINLLSA---HVSHEPLHCLVVKCGMVN-DIS 172
Query: 223 VQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG 282
V ++L+ Y +CG + +A Y S S+ S+++ G +D F
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 232
Query: 283 IGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLL 342
+ +D V H AIK G + V LI Y + V
Sbjct: 233 MKIDAVAL--VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVET 290
Query: 343 SQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEML-EAMIRKGLKPDRVTFLCVLTGCS 401
+FEQ+ + + S+I+G +G E+ + M+ GL PD +T +L GCS
Sbjct: 291 VLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 350
Query: 402 H 402
Sbjct: 351 Q 351
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 16/277 (5%)
Query: 145 IPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFG 204
+P D + WN+++ Y+ NG DA +L +M G PS + V L + G G
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLH 264
+H K G + S V++ALI Y KC ++ +A + + S N+++ +
Sbjct: 61 RSVHGVAAKSGLELDS-QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQ 119
Query: 265 CGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDV 324
G+ ++ +F M ++ + + VT HC +K G +D+
Sbjct: 120 SGLQEEAITVFKNMFEKNVEISPVTI--------INLLSAHVSHEPLHCLVVKCGMVNDI 171
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK 384
SV SL+ AY R G ++ +++++ ++ TSI++ +A G + +
Sbjct: 172 SVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQL 231
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
+K D V + +L GC S ++ G SLHG
Sbjct: 232 CMKIDAVALVGILHGCKKSSHIDIGM-------SLHG 261
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 235/510 (46%), Gaps = 3/510 (0%)
Query: 23 LVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELN 82
++ +Y ++ A KLFDE+ E N + ++ + E G+ D+ +GL++ + +
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 83 GLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSF 142
+ L++ N R D G Q+H HVI+ G +N + +V+ Y CG L AK+ F
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLC-SNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 143 QAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNAL 202
+ ++ ++ ++ Y G DAL+L + G + F L +
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELN 302
Query: 203 FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSL 262
G QIH CV K+G ++ V V + L+D Y KC ++A ++ + + +++++
Sbjct: 303 LGKQIHACVAKLGLES-EVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGY 361
Query: 263 LHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYES 322
++ + F + + + +F+ H AIK
Sbjct: 362 CQMSQFEEAVKTFKSLRSKNASILN-SFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
+LI Y + G + + +VFE + P++ +T+ I+G A+ G + L + E M+
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 383 RKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXX 442
G+KP+ VTF+ VLT CSH+GLVE+G+ ++M + ++P DH+ CM+
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 443 XXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFY 502
P D + W L C H+N +G A + L LDPED A ++ N Y
Sbjct: 541 DEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLY 600
Query: 503 SETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ G++E + ++ ++ R + KE+ S I
Sbjct: 601 TWAGKWEEAAEMMKLMNERMLKKELSCSWI 630
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 150/351 (42%), Gaps = 5/351 (1%)
Query: 52 NLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIK 111
NL L + +E E+ V ++ S+ L C R G LH ++
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-MR 110
Query: 112 VGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALE 171
+G + ++ + N ++ Y C L +A K F + + +S +M+S YA+ G+ A+
Sbjct: 111 MGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVG 170
Query: 172 LLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMY 231
L M G KP + L FG QIH VI+ G + + +++ +++MY
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNT-SIETGIVNMY 229
Query: 232 GKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFS 291
KCG + A ++ + + C LM G D ++F +V EG+ D FS
Sbjct: 230 VKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFS 289
Query: 292 TXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP 351
H C KLG ES+VSV L+D Y++ + + F++I
Sbjct: 290 V--VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 352 LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP-DRVTFLCVLTGCS 401
PN +++II+G+ ++ ++ +++ K + T+ + CS
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS 398
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 188/425 (44%), Gaps = 45/425 (10%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H I+ G N I + +V +Y++ G + A ++FD++ + ++ G+ + G
Sbjct: 206 IHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGR 265
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ L L+ ++ + VE + F +++ C++ + G Q+H V K+G +++ + V
Sbjct: 266 ARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG-LESEVSVGT 324
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
LVDFY C A ++FQ I + +SW++++S Y F +A++ ++ K
Sbjct: 325 PLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR--SKNA 382
Query: 184 SIR---SFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
SI ++ S + G Q+H IK GS + +SALI MY KCG + +A
Sbjct: 383 SILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL-IGSQYGESALITMYSKCGCLDDA 441
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXX 300
+ES+ + + ++ + G + +F MV G+ + VTF
Sbjct: 442 NEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTF---------- 491
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
H ++ G +D LR +V P + +
Sbjct: 492 ---IAVLTACSHAGLVEQGKH--------CLDTMLRKYNV-----------APTIDHYDC 529
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLH 420
+I+ +A +GL + L+ ++ M +PD +++ C L+GC +E G + + E L
Sbjct: 530 MIDIYARSGLLDEALKFMKNM---PFEPDAMSWKCFLSGCWTHKNLELGEI---AGEELR 583
Query: 421 GISPD 425
+ P+
Sbjct: 584 QLDPE 588
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/571 (24%), Positives = 256/571 (44%), Gaps = 40/571 (7%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH I G ++ + LV Y L + A + + + WN+++ + + L
Sbjct: 65 VHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNEL 124
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
F+E++ Y + + + ++ +++ C G +HG I+V ++++V N
Sbjct: 125 FEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS-IEVSSYKSSLYVCN 183
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
AL+ Y + A++ F + D +SWN++++ YA G++ +A EL M F G +
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 184 SIRS-------------FVGFLNLSSK----------------------TGNALFGMQIH 208
S+ + +VG L L S+ G G +IH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
I +D G +V++ LI MY KC D+++A+ + SL NS+++
Sbjct: 304 GLAIHSSYD-GIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKS 362
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
++ + M+ G + +T ++ HC ++ D ++
Sbjct: 363 EEASHLLREMLVAGFQPNSITLAS--ILPLCARIANLQHGKEFHCYILRRKCFKDYTMLW 420
Query: 329 -SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLK 387
SL+D Y +SG ++ +++V + + + +TS+I+G+ G G L + + M R G+K
Sbjct: 421 NSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIK 480
Query: 388 PDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXX 447
PD VT + VL+ CSHS LV EG +F M+ +GI P HFSCMV
Sbjct: 481 PDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKD 540
Query: 448 XXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGE 507
P + W++LL +C +H N +G+ AA+ LL + PE+ ++ ++N Y+ G
Sbjct: 541 IIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGS 600
Query: 508 FEASMQIKEIAIARKMTKEIGHSLIGLNSCY 538
+ +++ I + K+ G + I +S +
Sbjct: 601 WSKLAEVRTIMRDLGVKKDPGCAWIDTDSGF 631
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 147/359 (40%), Gaps = 35/359 (9%)
Query: 85 SFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQA 144
S L+ C + R F G Q+H H I G V+ + + LV FYSA +EA+ +
Sbjct: 45 SAASLLSACVDVRAFLAGVQVHAHCISSG-VEYHSVLVPKLVTFYSAFNLHNEAQSIIEN 103
Query: 145 IPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFG 204
+ L WN +++ YA N LF + + M G +P ++ L +T + FG
Sbjct: 104 SDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFG 163
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLH 264
+H I++ S++V +ALI MY + ++ A ++ + N+++
Sbjct: 164 RVVHGS-IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS 222
Query: 265 CGIVDDVFEMFGLMVDEGIGLDEVTFS-------------------TXXXXXXXXXXXXX 305
G+ + FE+F M G+ + +T++ +
Sbjct: 223 EGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVA 282
Query: 306 XXXXXXHCC---AIKLG-----------YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP 351
C AI+LG Y+ +V +LI Y + + + VF Q
Sbjct: 283 MIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE 342
Query: 352 LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
++ + SII+G+A ++ +L M+ G +P+ +T +L C+ ++ G+
Sbjct: 343 ENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 237/488 (48%), Gaps = 5/488 (1%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
++H A++ G ++ + +SL+ +Y + G +++A +LF + +R++ +W+ ++ + + G
Sbjct: 321 AIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAG 380
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
DE + L+ ++ +++ N ++ +++GC+ G +H + IK +++ + A
Sbjct: 381 QHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD-IESELETA 439
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
A++ Y+ CG S A K+F+ +P++D +++N++ Y G A ++ M+ G
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P R+ VG L + + G ++ +IK GFD+ HV ALI+M+ KC + A+
Sbjct: 500 PDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS-ECHVAHALINMFTKCDALAAAIV 558
Query: 243 TYESLPM-TSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
++ S N +M L G ++ F M E + VTF
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELS 618
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
H I+ G+ S V SL+D Y + G + S+K F +I + + ++
Sbjct: 619 ALRVGMSV--HSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTM 676
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
++ +A +GL + + +M LKPD V+FL VL+ C H+GLVEEG+ +F M H
Sbjct: 677 LSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHK 736
Query: 422 ISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAA 481
I + +H++CMV + + +W +LL S R+H N + A
Sbjct: 737 IEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAAL 796
Query: 482 KILLGLDP 489
L+ L+P
Sbjct: 797 CQLVKLEP 804
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 200/413 (48%), Gaps = 6/413 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H ++G ++YIG++LV +Y + + A ++FD++ +++ TWN ++ G + G
Sbjct: 122 IHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGC 181
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
L L+++++ V+++ +S LI S D LHG VIK G++ ++
Sbjct: 182 SSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI---FAFSS 238
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
L+D Y C L A+ F+ + +D SW +M++ YA NG F + LEL +M+ + +
Sbjct: 239 GLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 298
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ + L ++ G+ + G+ IH ++ G G V V ++L+ MY KCG+++ A
Sbjct: 299 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLI-GDVSVATSLMSMYSKCGELEIAEQL 357
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+ ++ + ++++ S G D+ +F M+ I + VT ++
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTS--VLQGCAGVA 415
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
HC AIK ES++ + ++I Y + G + K FE++P+ + F ++
Sbjct: 416 ASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
G+ G + ++ + M G+ PD T + +L C+ G V+ +
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI 528
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 185/382 (48%), Gaps = 7/382 (1%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDN-V 79
+ L+ Y DL+ +FD + + + WN ++RG+ GL E LG + + + +
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 80 ELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
+ + SF + ++ C+ F +G ++H + ++G +++++++ ALV+ Y L A+
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMG-LESDVYIGTALVEMYCKARDLVSAR 155
Query: 140 KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
+ F + ++DV++WN+M+S A NG AL L + M+ S + SK
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLE 215
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLM 259
+ +H VIK GF S LIDMY C D+ A S +E + ++M
Sbjct: 216 KSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMM 272
Query: 260 TSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLG 319
+ H G ++V E+F LM + + +++V ++ H A++ G
Sbjct: 273 AAYAHNGFFEEVLELFDLMRNYDVRMNKVAAAS--ALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 320 YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLE 379
DVSV+ SL+ Y + G + +++++F I +V ++++I + G + + +
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 380 AMIRKGLKPDRVTFLCVLTGCS 401
M+R +KP+ VT VL GC+
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCA 412
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/603 (24%), Positives = 260/603 (43%), Gaps = 70/603 (11%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
H R +K G + YI + L+ Y + A + +P+ + +++ ++ +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
LF + +G+++ + + + L + C+ F G Q+H V V +D + FV
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHC-VSCVSGLDMDAFV 153
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
++ Y CG + +A+K F + +DV++ +++L YA G + + +L M+ G
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 182 KPSIRSFVGFLNLSSKTGN-----ALF------------------------------GMQ 206
+ +I S+ G L+ +++G +F G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 207 IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCG 266
IH VIK G V SA+IDMYGK G + +S + M CN+ +T L G
Sbjct: 274 IHGYVIKQGLLKDKC-VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 267 IVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXX------------------ 308
+VD EMF L ++ + L+ V++++
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 309 ---------------XXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP 353
H A+++ +V V +LID Y + G + LSQ VF +P
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 354 NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVF 413
N+ C+ S++NGF+ +G K+ + + E+++R LKPD ++F +L+ C GL +EG F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 414 NSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRN 473
M +GI P +H+SCMV + P D +W +LL SCR+ N
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 474 ETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIG 533
+ AA+ L L+PE+ ++ +SN Y+ G + I+ + + K G S I
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Query: 534 LNS 536
+ +
Sbjct: 633 VKN 635
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/568 (25%), Positives = 263/568 (46%), Gaps = 38/568 (6%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLY-MRLG-LIDLALKLFDELPERNLATWNLVLRGFC 59
+H ++I G N L + RLG + A KLF ++PE ++ WN +++G+
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 60 ELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCS-NKRFFDEGSQLHGHVIKVGWVDTN 118
++ E + LY + + V + +F +L+ G + G +LH HV+K G + +N
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFG-LGSN 169
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
++V NALV YS CG + A+ F EDV SWN M+S Y + +++ELL M+
Sbjct: 170 LYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMER 229
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
P+ + + L+ SK + ++H V + + S+ +++AL++ Y CG++
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE-PSLRLENALVNAYAACGEMD 288
Query: 239 NAVSTYESL-------------------------------PMTSLECCNSLMTSLLHCGI 267
AV + S+ P+ ++ L G
Sbjct: 289 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 348
Query: 268 VDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVS 327
++ E+F M G+ DE T + + K+ ++DV V
Sbjct: 349 FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI--KNDVVVG 406
Query: 328 CSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLK 387
+LID Y + G +QKVF + + F +T+++ G A NG G++ +++ M ++
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ 466
Query: 388 PDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXX 447
PD +T+L VL+ C+HSG+V++ R F M S H I P H+ CMV
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 448 XXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGE 507
+ P + ++W +LL + R+H +E + AAK +L L+P++ AV+ + N Y+
Sbjct: 527 ILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKR 586
Query: 508 FEASMQIKEIAIARKMTKEIGHSLIGLN 535
++ +++ + + K G SLI +N
Sbjct: 587 WKDLREVRRKIVDVAIKKTPGFSLIEVN 614
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/567 (25%), Positives = 267/567 (47%), Gaps = 43/567 (7%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + +K GF +++ ++LV +YM++ + ALK+ DE+PER +A+ N + G E G
Sbjct: 53 LHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGF 112
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ ++ + ++ +N ++ ++ GC + + G QLH +K G+ + ++V
Sbjct: 113 CRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---IEGGMQLHCLAMKSGF-EMEVYVGT 168
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM-QFWGKK 182
+LV YS CG A + F+ +P + V+++N+ +S +NG+ + +M +F ++
Sbjct: 169 SLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEE 228
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+ +FV + + N +G Q+H V+K F ++ V +ALIDMY KC K+A
Sbjct: 229 PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM-VGTALIDMYSKCRCWKSAYI 287
Query: 243 TYESLPMT-SLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
+ L T +L NS+++ ++ G + E+F + EG+ D T+++
Sbjct: 288 VFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLG 347
Query: 302 XXXXXXX---------------------------------XXXHCCAIKLGYESDVSVSC 328
H IK E D+ V
Sbjct: 348 KVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLT 407
Query: 329 SLIDAYLRSGHVLLSQKVFEQI-PLPNVFCFTSI-INGFAWNGLGKQCLEMLEAMIRKGL 386
SLID Y++ G ++++F++ P P F ++ I+G+ +G + +E+ E + + +
Sbjct: 408 SLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKV 467
Query: 387 KPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXX 446
+P TF VL+ CSH G VE+G +F M+ +G P +H CM+
Sbjct: 468 EPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAK 527
Query: 447 XXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETG 506
Q V SSLL SCR H + +G AA L L+PE+ A + +S+ Y+
Sbjct: 528 EVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALE 586
Query: 507 EFEASMQIKEIAIARKMTKEIGHSLIG 533
+E I+++ +++ K G SL G
Sbjct: 587 RWEDVESIRQVIDQKQLVKLPGLSLSG 613
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 158/340 (46%), Gaps = 9/340 (2%)
Query: 82 NGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKS 141
N +F L++ C+ +G LH V+K G+ ++F A ALV Y +++A K
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFF-VDVFTATALVSMYMKVKQVTDALKV 88
Query: 142 FQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNA 201
+P + S N+ +S +NG DA + + G S + V ++ G+
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSG---SGMNSVTVASVLGGCGDI 145
Query: 202 LFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTS 261
GMQ+HC +K GF+ V+V ++L+ MY +CG+ A +E +P S+ N+ ++
Sbjct: 146 EGGMQLHCLAMKSGFEM-EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 262 LLHCGIVDDVFEMFGLMVD-EGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGY 320
L+ G+++ V +F LM ++VTF H +K +
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTF--VNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 321 ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP-LPNVFCFTSIINGFAWNGLGKQCLEMLE 379
+ + V +LID Y + + VF ++ N+ + S+I+G NG + +E+ E
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 380 AMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESL 419
+ +GLKPD T+ +++G S G V E F M S+
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV 362
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 15/253 (5%)
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+ +F L +K G+ + G +H V+K GF V +AL+ MY K + +A+
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGF-FVDVFTATALVSMYMKVKQVTDALK 87
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+ +P + N+ ++ LL G D F MFG G G++ VT ++
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG 147
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
HC A+K G+E +V V SL+ Y R G +L+ ++FE++P +V + + I
Sbjct: 148 GMQL-----HCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 363 NGFAWNGLGKQCLEMLEAMIR-KGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
+G NG+ + M + +P+ VTF+ +T C+ ++ GR LHG
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGR-------QLHG 255
Query: 422 ISPDRD-HFSCMV 433
+ ++ F MV
Sbjct: 256 LVMKKEFQFETMV 268
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/535 (24%), Positives = 242/535 (45%), Gaps = 34/535 (6%)
Query: 33 IDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLD---NVELNGLSFCYL 89
+D ++K+ + N+ +WN+ +RGF E E LY ++ + ++ L
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 90 IRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMED 149
+ C++ R G + GHV+K+ ++ V NA + +++CG + A+K F P+ D
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLR-LELVSHVHNASIHMFASCGDMENARKVFDESPVRD 221
Query: 150 VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHC 209
++SWN +++ Y G A+ + +M+ G KP + +G ++ S G+ G + +
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE 281
Query: 210 CVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVD 269
V + G ++ + +AL+DM+ KCGDI A +++L ++ ++++ CG++D
Sbjct: 282 YVKENGL-RMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 270 DVFEMFGLMVDEGI---------------GLDEVTFSTXXXXXXXXXXXXXXXXXXXHCC 314
++F M ++ + G D + C
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 315 AI--------------KLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
+ K +V++ SL+D Y + G++ + VF I N +T+
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTA 460
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLH 420
II G A +G + MI G+ PD +TF+ +L+ C H G+++ GR F+ M+S
Sbjct: 461 IIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRF 520
Query: 421 GISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRA 480
++P H+S MV P D +W +LL CR+H N +G +A
Sbjct: 521 NLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKA 580
Query: 481 AKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
AK LL LDP D +++ + Y E +E + + + + R + K G S I +N
Sbjct: 581 AKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVN 635
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 148/313 (47%), Gaps = 33/313 (10%)
Query: 9 IKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELL 68
+KL ++ ++ + ++ G ++ A K+FDE P R+L +WN ++ G+ ++G ++ +
Sbjct: 183 LKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAI 242
Query: 69 GLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDF 128
+Y ++ + V+ + ++ L+ CS + G + + +V + G + I + NAL+D
Sbjct: 243 YVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG-LRMTIPLVNALMDM 301
Query: 129 YSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLF---------------------- 166
+S CG + EA++ F + ++SW +M+S YA GL
Sbjct: 302 FSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMI 361
Query: 167 ---------LDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFD 217
DAL L MQ KP + + L+ S+ G G+ IH + K
Sbjct: 362 GGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSL- 420
Query: 218 NGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGL 277
+ +V + ++L+DMY KCG+I A+S + + + +++ L G F
Sbjct: 421 SLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNE 480
Query: 278 MVDEGIGLDEVTF 290
M+D GI DE+TF
Sbjct: 481 MIDAGIAPDEITF 493
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 116/232 (50%), Gaps = 3/232 (1%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
++++ Y R GL+D++ KLFD++ E+++ WN ++ G + + L L+ E++ N +
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 81 LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKK 140
+ ++ + + CS D G +H ++ K + N+ + +LVD Y+ CG +SEA
Sbjct: 387 PDEITMIHCLSACSQLGALDVGIWIHRYIEKYS-LSLNVALGTSLVDMYAKCGNISEALS 445
Query: 141 SFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGN 200
F I + L++ +++ A +G A+ M G P +F+G L+ G
Sbjct: 446 VFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGM 505
Query: 201 ALFGMQIHCCVIKMGFD-NGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
G + +K F+ N + S ++D+ G+ G ++ A ES+PM +
Sbjct: 506 IQTGRD-YFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA 556
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 151/636 (23%), Positives = 270/636 (42%), Gaps = 106/636 (16%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+VH I GF +I + L+ +Y + ++ A +LFDE+ E + ++ G+C
Sbjct: 34 RAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCAS 93
Query: 62 GLFDELLGLYNEIKL---DNVELNGL--SFCYLIRGCSNKRFF----------------- 99
G G++ + + D V N + F + G S F
Sbjct: 94 GDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFAS 153
Query: 100 ----------DEGS--QLHGHVIK--VGWVDTNIFVANALVDFYSACGC----LSEAKKS 141
DE Q H +K G++ + V+NALV YS C L A+K
Sbjct: 154 VLAGLALVADDEKQCVQFHAAALKSGAGYITS---VSNALVSVYSKCASSPSLLHSARKV 210
Query: 142 FQAIPMEDVLSW--------------------------------NSMLSVYADNGLFLDA 169
F I +D SW N+M+S Y + G + +A
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 170 LELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALID 229
LE++ M G + ++ + + G G Q+H V++ ++ S H ++L+
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR--EDFSFHFDNSLVS 328
Query: 230 MYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGI------ 283
+Y KCG A + +E +P L N+L++ + G + + +F M ++ I
Sbjct: 329 LYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388
Query: 284 -----------------------GLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGY 320
G + ++ H +K+G+
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF 448
Query: 321 ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEA 380
+S +S +LI Y + G V +++VF +P + + ++I +G G + +++ E
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE 508
Query: 381 MIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXX 440
M++KG++PDR+T L VLT CSH+GLV++GR F+SME+++ I P DH++ ++
Sbjct: 509 MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSG 568
Query: 441 XXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSN 500
P + +W +LL CRVH N +G AA L GL PE ++ +SN
Sbjct: 569 KFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSN 628
Query: 501 FYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
++ TG++E +++++ R + KE+ S I + +
Sbjct: 629 MHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 254/530 (47%), Gaps = 19/530 (3%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH ++ G+ ++ + ++L+ +Y++ G + A LFD +P R++ +WN ++ G+ E
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCS---NKRFFDEGSQLHGHVIKVGWVDTN 118
G+ E L L+ ++ +V+ + ++ +I C ++R G +H +VI G+ +
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL---GRDIHAYVITTGFA-VD 331
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
I V N+L Y G EA+K F + +D++SW +M+S Y N L A++ +M
Sbjct: 332 ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ 391
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
KP + L+ + G+ G+++H IK + V V + LI+MY KC I
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS-YVIVANNLINMYSKCKCID 450
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
A+ + ++P ++ S++ L + + FE + + L +
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLR---LNNRCFEALIFLRQMKMTLQPNAITLTAALAA 507
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCF 358
H ++ G D + +L+D Y+R G + + F +V +
Sbjct: 508 CARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSW 566
Query: 359 TSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES 418
++ G++ G G +E+ + M++ ++PD +TF+ +L GCS S +V +G + F+ ME
Sbjct: 567 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED 626
Query: 419 LHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGR 478
+G++P+ H++C+V + P D +W +LL +CR+H +G
Sbjct: 627 -YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGE 685
Query: 479 RAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIG 528
+A+ + LD + ++ + N Y++ G++ +E+A R+M KE G
Sbjct: 686 LSAQHIFELDKKSVGYYILLCNLYADCGKW------REVAKVRRMMKENG 729
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 180/372 (48%), Gaps = 6/372 (1%)
Query: 19 IGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNE-IKLD 77
+G++ + +++R G + A +F ++ ERNL +WN+++ G+ + G FDE + LY+ + +
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 78 NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSE 137
V+ + +F ++R C G ++H HV++ G+ + +I V NAL+ Y CG +
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGY-ELDIDVVNALITMYVKCGDVKS 249
Query: 138 AKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSK 197
A+ F +P D++SWN+M+S Y +NG+ + LEL + M+ P + + ++
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 198 TGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNS 257
G+ G IH VI GF + V ++L MY G + A + + + +
Sbjct: 310 LGDRRLGRDIHAYVITTGF-AVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 258 LMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIK 317
+++ + + D + + +M + + DE+T + H AIK
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAA--VLSACATLGDLDTGVELHKLAIK 426
Query: 318 LGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEM 377
S V V+ +LI+ Y + + + +F IP NV +TSII G N + L
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIF 486
Query: 378 LEAMIRKGLKPD 389
L M + L+P+
Sbjct: 487 LRQM-KMTLQPN 497
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 168/357 (47%), Gaps = 7/357 (1%)
Query: 55 LRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGW 114
L G C G +E + L N ++ V ++ F L+R C KR +EGS+++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALS-SM 124
Query: 115 VDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLY 174
+ + NA + + G L +A F + ++ SWN ++ YA G F +A+ LY
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAM-CLY 183
Query: 175 IMQFW--GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYG 232
W G KP + +F L + G ++H V++ G++ + V +ALI MY
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYE-LDIDVVNALITMYV 242
Query: 233 KCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFST 292
KCGD+K+A ++ +P + N++++ G+ + E+F M G+ +D +
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM--RGLSVDPDLMTL 300
Query: 293 XXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL 352
H I G+ D+SV SL YL +G ++K+F ++
Sbjct: 301 TSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER 360
Query: 353 PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
++ +T++I+G+ +N L + ++ M + +KPD +T VL+ C+ G ++ G
Sbjct: 361 KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/533 (25%), Positives = 235/533 (44%), Gaps = 38/533 (7%)
Query: 36 ALKLFDELPERNLA-TWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCS 94
AL +F +P + +N LR + Y I+ L+ SF +++ S
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 95 NKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWN 154
EG +LHG K+ + + FV +D Y++CG ++ A+ F + DV++WN
Sbjct: 123 KVSALFEGMELHGVAFKIATL-CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 155 SMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVI-- 212
+M+ Y GL +A +L M+ P ++ +TGN + I+ +I
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 213 ------------------------------KMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
KM N + V +A++ Y KCG + +A
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN--LFVSTAMVSGYSKCGRLDDAQV 299
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
++ L C +++++ + + +F M GI D V S
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVV--SMFSVISACANL 357
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H C G ES++S++ +LI+ Y + G + ++ VFE++P NV ++S+I
Sbjct: 358 GILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMI 417
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
N + +G L + M ++ ++P+ VTF+ VL GCSHSGLVEEG+ +F SM + I
Sbjct: 418 NALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNI 477
Query: 423 SPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAK 482
+P +H+ CMV P + V+W SL+ +CR+H +G+ AAK
Sbjct: 478 TPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAK 537
Query: 483 ILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
+L L+P+ + +SN Y+ +E I+ + + + KE G S I N
Sbjct: 538 RILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQN 590
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 147/317 (46%), Gaps = 31/317 (9%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H A K+ + ++ + + +Y G I+ A +FDE+ R++ TWN ++ +C GL
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL 192
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGC---SNKRF--------FDEGSQLHGHVIK- 111
DE L+ E+K NV + + C ++ C N R+ + ++ H++
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 112 -------VGWVD-----------TNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSW 153
G +D N+FV+ A+V YS CG L +A+ F +D++ W
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 154 NSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIK 213
+M+S Y ++ +AL + M G KP + S ++ + G +H C+
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 214 MGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFE 273
G ++ + + +ALI+MY KCG + +E +P ++ +S++ +L G D
Sbjct: 373 NGLES-ELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 431
Query: 274 MFGLMVDEGIGLDEVTF 290
+F M E + +EVTF
Sbjct: 432 LFARMKQENVEPNEVTF 448
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
NL++ +++V Y + G +D A +FD+ +++L W ++ + E E L ++ E+
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
++ + +S +I C+N D+ +H I V +++ + + NAL++ Y+ CG L
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHS-CIHVNGLESELSINNALINMYAKCGGL 395
Query: 136 SEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLS 195
+ F+ +P +V+SW+SM++ + +G DAL L M+ +P+ +FVG L
Sbjct: 396 DATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455
Query: 196 SKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
S +G G +I + + ++D++G+ ++ A+ ES+P+ S
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS 511
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLY 71
G L I ++L+ +Y + G +D +F+++P RN+ +W+ ++ G + L L+
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLF 433
Query: 72 NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSA 131
+K +NVE N ++F ++ GCS+ +EG ++ + + + +VD +
Sbjct: 434 ARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGR 493
Query: 132 CGCLSEAKKSFQAIPM-EDVLSWNSMLS 158
L EA + +++P+ +V+ W S++S
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMS 521
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 217/439 (49%), Gaps = 13/439 (2%)
Query: 86 FCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAI 145
F L+ C + R D G ++H H+I + N+ +++ LV Y++CG A + F +
Sbjct: 95 FASLLETCYSLRAIDHGVRVH-HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 146 PMED--VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF 203
D +WNS++S YA+ G + DA+ L + M G KP +F L G+
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 204 GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLL 263
G IH ++K GF V+V +AL+ MY KCGDI A + ++ +P NS++T L
Sbjct: 214 GEAIHRDLVKEGF-GYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYL 272
Query: 264 HCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESD 323
H G++ + ++F LMV GI D+V S+ H I+ G E +
Sbjct: 273 HHGLLHEALDIFRLMVQNGIEPDKVAISS-----VLARVLSFKHGRQLHGWVIRRGMEWE 327
Query: 324 VSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIR 383
+SV+ +LI Y + G + + +F+Q+ + + +II+ + N G L+ E M R
Sbjct: 328 LSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHR 384
Query: 384 KGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXX 443
KPD +TF+ VL+ C+++G+VE+G +F+ M +GI P +H++CMV
Sbjct: 385 ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 444 XXXXXXXQTPG-RGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFY 502
Q G +W +LL +C +H N +G AA+ L L+P++ + Y
Sbjct: 445 EAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIY 504
Query: 503 SETGEFEASMQIKEIAIAR 521
S+ E +++++ + R
Sbjct: 505 SKAKRAEDVERVRQMMVDR 523
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 135/248 (54%), Gaps = 7/248 (2%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLA--TWNLVLRGFCELGLFDELLGLYNE 73
NL I S LV LY G ++A ++FD + +R+ + WN ++ G+ ELG +++ + LY +
Sbjct: 126 NLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ 185
Query: 74 IKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACG 133
+ D V+ + +F +++ C G +H ++K G+ +++V NALV Y+ CG
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGF-GYDVYVLNALVVMYAKCG 244
Query: 134 CLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLN 193
+ +A+ F IP +D +SWNSML+ Y +GL +AL++ +M G +P V +
Sbjct: 245 DIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDK---VAISS 301
Query: 194 LSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE 253
+ ++ + G Q+H VI+ G + + V +ALI +Y K G + A ++ +
Sbjct: 302 VLARVLSFKHGRQLHGWVIRRGME-WELSVANALIVLYSKRGQLGQACFIFDQMLERDTV 360
Query: 254 CCNSLMTS 261
N+++++
Sbjct: 361 SWNAIISA 368
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 128/242 (52%), Gaps = 11/242 (4%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
++H +K GFG+++Y+ ++LV +Y + G I A +FD +P ++ +WN +L G+ G
Sbjct: 216 AIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG 275
Query: 63 LFDELLGLYNEIKLDNVELNGLSF-CYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
L E L ++ + + +E + ++ L R S F G QLHG VI+ G ++ + V
Sbjct: 276 LLHEALDIFRLMVQNGIEPDKVAISSVLARVLS----FKHGRQLHGWVIRRG-MEWELSV 330
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
ANAL+ YS G L +A F + D +SWN+++S ++ N + L+ M
Sbjct: 331 ANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMHRANA 387
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIK-MGFDNGSVHVQSALIDMYGKCGDIKNA 240
KP +FV L+L + TG G ++ + K G D H + ++++YG+ G ++ A
Sbjct: 388 KPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHY-ACMVNLYGRAGMMEEA 446
Query: 241 VS 242
S
Sbjct: 447 YS 448
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/606 (24%), Positives = 264/606 (43%), Gaps = 81/606 (13%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH +K G +++ SSL +Y + G++D A K+FDE+P+RN WN ++ G+ + G
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGK 254
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+E + L+++++ VE ++ + +N +EG Q H I G NI
Sbjct: 255 NEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL-GT 313
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+L++FY G + A+ F + +DV++WN ++S Y GL DA+ + +M+ K
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ ++ +++T N G ++ C I+ F++ V + S ++DMY KCG I +A
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV-LASTVMDMYAKCGSIVDAKKV 432
Query: 244 YESLPMTSLECCNSLMT-----------------------------------SLLHCGIV 268
++S L N+L+ SLL G V
Sbjct: 433 FDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQV 492
Query: 269 DDVFEMFGLMVDEGI---------------------------------GLDEVTFSTXXX 295
D+ +MF M GI GL FS
Sbjct: 493 DEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVA 552
Query: 296 XXXXXXXXXXXXXXXXHCCAIK-LGYESDVSVSCSLIDAYLRSGHVLLSQKVF-----EQ 349
H I+ L + S VS+ SL+D Y + G + ++KVF +
Sbjct: 553 LSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSE 612
Query: 350 IPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
+PL N ++I+ +A G K+ + + ++ GLKPD +T VL+ C+H+G + +
Sbjct: 613 LPLSN-----AMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQA 667
Query: 410 RLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCR 469
+F + S + P +H+ MV + P + D M SL+ SC
Sbjct: 668 IEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCN 727
Query: 470 VHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGH 529
R + ++ LL +PE+ ++ +SN Y+ G ++ ++++E+ A+ + K+ G
Sbjct: 728 KQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGC 787
Query: 530 SLIGLN 535
S I +
Sbjct: 788 SWIQIT 793
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 219/439 (49%), Gaps = 17/439 (3%)
Query: 2 NSVHCRAIKLG--FGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFC 59
+H R +K G + N YI + LV Y + +++A LF +L RN+ +W ++ C
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 149
Query: 60 ELGLFD-ELLG----LYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGW 114
+GL + L+G L NEI DN + + + C ++ G +HG+V+K G
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVVPNVC-----KACGALKWSRFGRGVHGYVVKSGL 204
Query: 115 VDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLY 174
D +FVA++L D Y CG L +A K F IP + ++WN+++ Y NG +A+ L
Sbjct: 205 EDC-VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFS 263
Query: 175 IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
M+ G +P+ + L+ S+ G G Q H I G + ++ + ++L++ Y K
Sbjct: 264 DMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI-LGTSLLNFYCKV 322
Query: 235 GDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXX 294
G I+ A ++ + + N +++ + G+V+D M LM E + D VT +T
Sbjct: 323 GLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLM 382
Query: 295 XXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPN 354
+C I+ +ESD+ ++ +++D Y + G ++ ++KVF+ +
Sbjct: 383 SAAARTENLKLGKEVQCYC--IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKD 440
Query: 355 VFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFN 414
+ + +++ +A +GL + L + M +G+ P+ +T+ ++ +G V+E + +F
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500
Query: 415 SMESLHGISPDRDHFSCMV 433
M+S GI P+ ++ M+
Sbjct: 501 QMQS-SGIIPNLISWTTMM 518
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 166/362 (45%), Gaps = 16/362 (4%)
Query: 58 FCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVG-WVD 116
C+ G E L L E+ N+ + + +++GC +R G Q+H ++K G +
Sbjct: 45 LCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYA 104
Query: 117 TNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDAL----EL 172
N ++ LV FY+ C L A+ F + + +V SW +++ V GL AL E+
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 173 LYIMQFWGK--KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDM 230
L F P++ G L S FG +H V+K G ++ V V S+L DM
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSR------FGRGVHGYVVKSGLED-CVFVASSLADM 217
Query: 231 YGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
YGKCG + +A ++ +P + N+LM + G ++ +F M +G+ VT
Sbjct: 218 YGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTV 277
Query: 291 STXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQI 350
ST H AI G E D + SL++ Y + G + ++ VF+++
Sbjct: 278 ST--CLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM 335
Query: 351 PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
+V + II+G+ GL + + M + M + LK D VT +++ + + ++ G+
Sbjct: 336 FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGK 395
Query: 411 LV 412
V
Sbjct: 396 EV 397
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 8/261 (3%)
Query: 163 NGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMG-FDNGSV 221
NG +AL L+ M F + + L + G QIH ++K G F +
Sbjct: 48 NGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNE 107
Query: 222 HVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDE 281
++++ L+ Y KC ++ A + L + ++ +++ G+ + F M++
Sbjct: 108 YIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLEN 167
Query: 282 GIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVL 341
I D F H +K G E V V+ SL D Y + G +
Sbjct: 168 EIFPD--NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLD 225
Query: 342 LSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
+ KVF++IP N + +++ G+ NG ++ + + M ++G++P RVT L+ +
Sbjct: 226 DASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASA 285
Query: 402 HSGLVEEGR-----LVFNSME 417
+ G VEEG+ + N ME
Sbjct: 286 NMGGVEEGKQSHAIAIVNGME 306
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 223/438 (50%), Gaps = 10/438 (2%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
+++ C+ E HG +I++ ++ ++ + N L++ YS CG + A++ F +
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRID-LEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 117
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
++SWN+M+ +Y N + +AL++ M+ G K S + L+ +AL ++H
Sbjct: 118 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 177
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
C +K D +++V +AL+D+Y KCG IK+AV +ES+ S +S++ +
Sbjct: 178 CLSVKTCID-LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 236
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
++ ++ + + L++ F+ H K G+ S+V V+
Sbjct: 237 EEALLLYRRA--QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 294
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
S +D Y + G + S +F ++ N+ + +II+GFA + K+ + + E M + G+ P
Sbjct: 295 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 354
Query: 389 DRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXX 448
+ VTF +L+ C H+GLVEEGR F M + +G+SP+ H+SCMV
Sbjct: 355 NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 414
Query: 449 XXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEF 508
P +W SLL SCRV++N + AA+ L L+PE+ H+ +SN Y+
Sbjct: 415 IKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYA----- 469
Query: 509 EASMQIKEIAIARKMTKE 526
A+ Q +EIA +RK+ ++
Sbjct: 470 -ANKQWEEIAKSRKLLRD 486
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 131/246 (53%), Gaps = 3/246 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC ++K NLY+G++L+ LY + G+I A+++F+ + +++ TW+ ++ G+ +
Sbjct: 176 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 235
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
++E L LY + ++E N + +I CSN EG Q+H + K G+ +N+FVA+
Sbjct: 236 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF-GSNVFVAS 294
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+ VD Y+ CG L E+ F + +++ WN+++S +A + + + L MQ G P
Sbjct: 295 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 354
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCV-IKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
+ +F L++ TG G + + G VH S ++D+ G+ G + A
Sbjct: 355 NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY-SCMVDILGRAGLLSEAYE 413
Query: 243 TYESLP 248
+S+P
Sbjct: 414 LIKSIP 419
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 147/288 (51%), Gaps = 2/288 (0%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLF 64
H + I++ ++ + + L+ Y + G ++LA ++FD + ER+L +WN ++ + +
Sbjct: 76 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 135
Query: 65 DELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANA 124
E L ++ E++ + + + + ++ C E +LH +K +D N++V A
Sbjct: 136 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKT-CIDLNLYVGTA 194
Query: 125 LVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPS 184
L+D Y+ CG + +A + F+++ + ++W+SM++ Y N + +AL L Q + +
Sbjct: 195 LLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQN 254
Query: 185 IRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTY 244
+ + S + G Q+H + K GF +V V S+ +DMY KCG ++ + +
Sbjct: 255 QFTLSSVICACSNLAALIEGKQMHAVICKSGF-GSNVFVASSAVDMYAKCGSLRESYIIF 313
Query: 245 ESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFST 292
+ +LE N++++ +V +F M +G+ +EVTFS+
Sbjct: 314 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSS 361
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H K GFG N+++ SS V +Y + G + + +F E+ E+NL WN ++ GF +
Sbjct: 275 KQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKH 334
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
E++ L+ +++ D + N ++F L+ C + +EG + + + N+
Sbjct: 335 ARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 394
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLS-WNSMLS---VYADNGLFLDALELLYIMQ 177
+ +VD G LSEA + ++IP + S W S+L+ VY + L A E L+ ++
Sbjct: 395 YSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELE 454
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 255/535 (47%), Gaps = 33/535 (6%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE--- 60
+H I+ GF + +S++ +Y + A KLFDE+ ER++ +W++V+R + +
Sbjct: 147 IHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKE 205
Query: 61 ----LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVD 116
L LF E++ +E K E + ++ +++ C+ D G +HG I+ G+
Sbjct: 206 PVVGLKLFKEMV---HEAK---TEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDL 259
Query: 117 TNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM 176
++FV N+L+D YS + A + F +++SWNS+L+ + N + +ALE+ ++M
Sbjct: 260 ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM 319
Query: 177 QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGD 236
+ + V L + L IH +I+ G+++ V + S+LID Y C
Sbjct: 320 VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVAL-SSLIDAYTSCSL 378
Query: 237 IKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX 296
+ +A + +S+ + C+++++ L H G D+ +F M D + ++
Sbjct: 379 VDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISL-----L 433
Query: 297 XXXXXXXXXXXXXXXHCCAIKLGYE-SDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNV 355
H AI+ +D+SV S++DAY + G + ++++ F+QI N+
Sbjct: 434 NACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNI 493
Query: 356 FCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNS 415
+T II+ +A NGL + L + + M +KG P+ VT+L L+ C+H GLV++G ++F S
Sbjct: 494 ISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKS 553
Query: 416 M-ESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPG--RGDCVMWSSLLRSCRVH- 471
M E H P H+SC+V P + W ++L CR
Sbjct: 554 MVEEDH--KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRF 611
Query: 472 RNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKE 526
+ + +L L+P L S + + F A +++A+ R++ KE
Sbjct: 612 KKLIITSEVVAEVLELEP------LCSSGYLLASSTFAAEKSWEDVAMMRRLVKE 660
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 191/411 (46%), Gaps = 17/411 (4%)
Query: 17 LYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKL 76
L+ G+S+ YM+ G + L+ FD + R+ +WN+++ G + G +E L ++++++
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 77 DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLS 136
E N + +I C + F +G ++HG+VI+ G+ + V N+++ Y+ LS
Sbjct: 121 WGFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGIS-SVQNSILCMYADSDSLS 177
Query: 137 EAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK-KPSIRSFVGFLNLS 195
A+K F + DV+SW+ ++ Y + + L+L M K +P + L
Sbjct: 178 -ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 196 SKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC 255
+ + G +H I+ GFD V V ++LIDMY K D+ +A ++ ++
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
NS++ +H D+ EMF LMV E + +DEVT + H
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVS--LLRVCKFFEQPLPCKSIHGVI 354
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCL 375
I+ GYES+ SLIDAY V + V + + +V +++I+G A G + +
Sbjct: 355 IRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAI 414
Query: 376 EMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDR 426
+ M P+ +T + +L CS S + + HGI+ R
Sbjct: 415 SIFCHMRD---TPNAITVISLLNACSVSADLRTSKWA-------HGIAIRR 455
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 4/247 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
S+H I+ G+ N SSL+ Y L+D A + D + +++ + + ++ G
Sbjct: 348 KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA 407
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G DE + ++ ++ N ++ L+ CS HG I+ +I V
Sbjct: 408 GRSDEAISIFCHMRDTP---NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 464
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
++VD Y+ CG + A+++F I ++++SW ++S YA NGL AL L M+ G
Sbjct: 465 GTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGY 524
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
P+ +++ L+ + G G+ I +++ H S ++DM + G+I AV
Sbjct: 525 TPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQH-YSCIVDMLSRAGEIDTAV 583
Query: 242 STYESLP 248
++LP
Sbjct: 584 ELIKNLP 590
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 225/476 (47%), Gaps = 42/476 (8%)
Query: 85 SFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQA 144
++C LI+ CS R +EG ++H H+ G+V I + N L+ Y+ CG L +A+K F
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFV-PGIVIWNRLLRMYAKCGSLVDARKVFDE 145
Query: 145 IPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ-----FWG-------KKPSIRSFVGFL 192
+P D+ SWN M++ YA+ GL +A +L M W KK +
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 193 NLSSKTGNA---LF-----------------GMQIHCCVIKMGFDNGSVHVQSALIDMYG 232
+L + N+ +F G +IH +++ G D+ V + S+L+DMYG
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV-LWSSLMDMYG 264
Query: 233 KCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFST 292
KCG I A + ++ + + S++ + F +F +V +E TF+
Sbjct: 265 KCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFA- 323
Query: 293 XXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL 352
H ++G++ S SL+D Y + G++ ++ V + P
Sbjct: 324 -GVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK 382
Query: 353 PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
P++ +TS+I G A NG + L+ + +++ G KPD VTF+ VL+ C+H+GLVE+G
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 442
Query: 413 FNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHR 472
F S+ H +S DH++C+V + P + +W+S+L C +
Sbjct: 443 FYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYG 502
Query: 473 NETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIG 528
N + AA+ L ++PE+ ++ ++N Y+ G++E ++ RK +EIG
Sbjct: 503 NIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKM------RKRMQEIG 552
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 204/454 (44%), Gaps = 43/454 (9%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH GF + I + L+ +Y + G + A K+FDE+P R+L +WN+++ G+ E+
Sbjct: 105 KKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEV 164
Query: 62 GLFDELLGLYNE----------------IKLDNVELNGLSFCYLIRGCSNKRF------- 98
GL +E L++E +K D E L L++ N R
Sbjct: 165 GLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPE-EALVLYSLMQRVPNSRPNIFTVSI 223
Query: 99 ----------FDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
G ++HGH+++ G +D++ + ++L+D Y CGC+ EA+ F I +
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAG-LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK 282
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
DV+SW SM+ Y + + + L + ++P+ +F G LN + G Q+H
Sbjct: 283 DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVH 342
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
+ ++GFD S S+L+DMY KCG+I++A + P L SL+ G
Sbjct: 343 GYMTRVGFDPYSF-ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQP 401
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAI-KLGYESDVSVS 327
D+ + F L++ G D VTF +L + SD +
Sbjct: 402 DEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSD-HYT 460
Query: 328 CSLIDAYLRSGHVLLSQKVFEQIPL-PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGL 386
C L+D RSG + V ++P+ P+ F + S++ G + G E + + + +
Sbjct: 461 C-LVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--I 517
Query: 387 KPDR-VTFLCVLTGCSHSGLVEEGRLVFNSMESL 419
+P+ VT++ + + +G EE + M+ +
Sbjct: 518 EPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEI 551
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 215/440 (48%), Gaps = 11/440 (2%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
L++ C+ + +G +H H+++ +I + N L++ Y+ CG L EA+K F+ +P
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQ-SIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
D ++W +++S Y+ + DAL M +G P+ + + ++ G Q+H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
+K GFD+ +VHV SAL+D+Y + G + +A +++L + N+L+
Sbjct: 185 GFCVKCGFDS-NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
+ E+F M+ +G FS H IK G +
Sbjct: 244 EKALELFQGMLRDGFRPSH--FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
+L+D Y +SG + ++K+F+++ +V + S++ +A +G GK+ + E M R G++P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 389 DRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXX 448
+ ++FL VLT CSHSGL++EG + M+ GI P+ H+ +V
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 449 XXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEF 508
+ P +W +LL +CR+H+N +G AA+ + LDP+D H+ + N Y+ G +
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 480
Query: 509 EASMQIKEIAIARKMTKEIG 528
+ ++ RK KE G
Sbjct: 481 NDAARV------RKKMKESG 494
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 10/281 (3%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+ +H +K GF N+++GS+L+ LY R GL+D A +FD L RN +WN ++ G
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
++ L L+ + D + S+ L CS+ F ++G +H ++IK G F
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG-EKLVAFA 299
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
N L+D Y+ G + +A+K F + DV+SWNS+L+ YA +G +A+ M+ G
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
+P+ SF+ L S +G G + + K G + H + ++D+ G+ GD+ A+
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT-VVDLLGRAGDLNRAL 418
Query: 242 STYESLPMTS--------LECCNSLMTSLLHCGIVDDVFEM 274
E +P+ L C + L + VFE+
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFEL 459
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 145/287 (50%), Gaps = 2/287 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH ++ F ++ +G++L+ +Y + G ++ A K+F+++P+R+ TW ++ G+ +
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ L +N++ N + +I+ + +R G QLHG +K G+ D+N+ V +
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGF-DSNVHVGS 200
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
AL+D Y+ G + +A+ F A+ + +SWN++++ +A ALEL M G +P
Sbjct: 201 ALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP 260
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
S S+ S TG G +H +IK G + + L+DMY K G I +A
Sbjct: 261 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSG-EKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
++ L + NSL+T+ G + F M GI +E++F
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 135/554 (24%), Positives = 247/554 (44%), Gaps = 41/554 (7%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H I G F+ + LV Y L+D A + + + WN+++ +
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
F E + +Y + + + ++ +I+ C+ F G +HG I+V N++V
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS-IEVSSHRCNLYV 221
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
NAL+ Y G + A++ F + D +SWN++++ Y +A +LL M G
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 182 KPSIRS-------------FVGFLN----------------------LSSKTGNALFGMQ 206
+ SI + ++G LN S G +G
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 207 IHCCVIKM-GFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
HC VI+ F + +V+++LI MY +C D+++A ++ + SL NS+++ +
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 266 GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKL-GYESDV 324
++ + M+ G + +T ++ HC ++ Y+ +
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEF--HCYILRRQSYKDCL 459
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK 384
+ SL+D Y +SG ++ +++VF+ + + +TS+I+G+ G G+ L + M R
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXX 444
G+KPD VT + VL+ CSHS LV EG +F ME + GI +H+SCMV
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 445 XXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAA-KILLGLDPEDFAVHLQVSNFYS 503
P M ++LL++C +H N +G AA K+LL PE ++ +++ Y+
Sbjct: 580 ARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYA 639
Query: 504 ETGEFEASMQIKEI 517
TG + + +K +
Sbjct: 640 VTGSWSKLVTVKTL 653
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 141/357 (39%), Gaps = 37/357 (10%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
L+ C F G QLH H I G ++ V LV FYSA L EA+ + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK-LVTFYSAFNLLDEAQTITENSEIL 147
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
L WN ++ Y N F +++ + M G + ++ + + + +G +H
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
I++ +++V +ALI MY + G + A ++ + N+++ +
Sbjct: 208 GS-IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXX----------------------XXXXXXXXXXXX 306
+ F++ M G+ VT++T
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 307 XXXXXHCCAIKLG------------YESDV-SVSCSLIDAYLRSGHVLLSQKVFEQIPLP 353
H A+K G + D+ +V SLI Y R + + VF+Q+
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 354 NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
++ + SII+GFA+N ++ +L+ M+ G P+ +T +L + G ++ G+
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 135/554 (24%), Positives = 247/554 (44%), Gaps = 41/554 (7%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H I G F+ + LV Y L+D A + + + WN+++ +
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
F E + +Y + + + ++ +I+ C+ F G +HG I+V N++V
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS-IEVSSHRCNLYV 221
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
NAL+ Y G + A++ F + D +SWN++++ Y +A +LL M G
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 182 KPSIRS-------------FVGFLN----------------------LSSKTGNALFGMQ 206
+ SI + ++G LN S G +G
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 207 IHCCVIKM-GFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
HC VI+ F + +V+++LI MY +C D+++A ++ + SL NS+++ +
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 266 GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKL-GYESDV 324
++ + M+ G + +T ++ HC ++ Y+ +
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEF--HCYILRRQSYKDCL 459
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK 384
+ SL+D Y +SG ++ +++VF+ + + +TS+I+G+ G G+ L + M R
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXX 444
G+KPD VT + VL+ CSHS LV EG +F ME + GI +H+SCMV
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 445 XXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAA-KILLGLDPEDFAVHLQVSNFYS 503
P M ++LL++C +H N +G AA K+LL PE ++ +++ Y+
Sbjct: 580 ARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYA 639
Query: 504 ETGEFEASMQIKEI 517
TG + + +K +
Sbjct: 640 VTGSWSKLVTVKTL 653
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 141/357 (39%), Gaps = 37/357 (10%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
L+ C F G QLH H I G ++ V LV FYSA L EA+ + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK-LVTFYSAFNLLDEAQTITENSEIL 147
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
L WN ++ Y N F +++ + M G + ++ + + + +G +H
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
I++ +++V +ALI MY + G + A ++ + N+++ +
Sbjct: 208 GS-IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXX----------------------XXXXXXXXXXXX 306
+ F++ M G+ VT++T
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 307 XXXXXHCCAIKLG------------YESDV-SVSCSLIDAYLRSGHVLLSQKVFEQIPLP 353
H A+K G + D+ +V SLI Y R + + VF+Q+
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 354 NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
++ + SII+GFA+N ++ +L+ M+ G P+ +T +L + G ++ G+
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 243/515 (47%), Gaps = 44/515 (8%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLD-NV 79
SS+V Y ++G I A LFD + ERN+ TW ++ G+ + G F++ GL+ ++ + +V
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 80 ELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
++N + + + C + + EGSQ+HG V ++ ++ ++F+ N+L+ YS G + EAK
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMP-LEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 140 KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
F + +D +SWNS+++ +A EL +K + V + ++
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELF-------EKMPGKDMVSWTDM----- 378
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLM 259
IK GF GK G+I V + +P +++
Sbjct: 379 ------------IK-GFS--------------GK-GEISKCVELFGMMPEKDNITWTAMI 410
Query: 260 TSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLG 319
++ + G ++ F M+ + + + TFS+ H +K+
Sbjct: 411 SAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI--HGRVVKMN 468
Query: 320 YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLE 379
+D+SV SL+ Y + G+ + K+F I PN+ + ++I+G+++NG GK+ L++
Sbjct: 469 IVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFS 528
Query: 380 AMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXX 439
+ G +P+ VTFL +L+ C H G V+ G F SM+S + I P DH++CMV
Sbjct: 529 MLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRS 588
Query: 440 XXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVS 499
P + +W SLL + + H + AAK L+ L+P+ ++ +S
Sbjct: 589 GLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLS 648
Query: 500 NFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGL 534
YS G+ +I I ++++ K+ G S I L
Sbjct: 649 QLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIIL 683
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 130/289 (44%), Gaps = 41/289 (14%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+ +H ++ F+L++G+SL+ +Y +LG + A +F + ++ +WN ++ G +
Sbjct: 295 SQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQR 354
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
E L+ ++ ++ V W D
Sbjct: 355 KQISEAYELFEKMPGKDM--------------------------------VSWTD----- 377
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
++ +S G +S+ + F +P +D ++W +M+S + NG + +AL + M
Sbjct: 378 ---MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEV 434
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
P+ +F L+ ++ + + G+QIH V+KM N + VQ++L+ MY KCG+ +A
Sbjct: 435 CPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVN-DLSVQNSLVSMYCKCGNTNDAY 493
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ + ++ N++++ + G ++F ++ G + VTF
Sbjct: 494 KIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTF 542
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 160/398 (40%), Gaps = 85/398 (21%)
Query: 36 ALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKL---DNVELNGLSFCYLIRG 92
A +LF ++PE+N ++ ++ GF G FDE LY E + D+V N L YL G
Sbjct: 132 AYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAG 191
Query: 93 CSNK--RFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDV 150
N+ R F G +K + +++V Y G + +A+ F + +V
Sbjct: 192 KWNEAVRVF------QGMAVK------EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV 239
Query: 151 LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF------- 203
++W +M+ Y G F D L M+ G + ++S T +F
Sbjct: 240 ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD----------VKVNSNTLAVMFKACRDFV 289
Query: 204 ----GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLM 259
G QIH V +M + + + ++L+ MY K G + A + + + NSL+
Sbjct: 290 RYREGSQIHGLVSRMPLE-FDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLI 348
Query: 260 TSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLG 319
T L+ + + +E+F M G D V+++
Sbjct: 349 TGLVQRKQISEAYELFEKMP----GKDMVSWT---------------------------- 376
Query: 320 YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLE 379
+I + G + ++F +P + +T++I+ F NG ++ L
Sbjct: 377 ---------DMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFH 427
Query: 380 AMIRKGLKPDRVTFLCVLTGCSH-----SGLVEEGRLV 412
M++K + P+ TF VL+ + GL GR+V
Sbjct: 428 KMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 2/170 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H R +K+ +L + +SLV +Y + G + A K+F + E N+ ++N ++ G+ G
Sbjct: 460 IHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGF 519
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ L L++ ++ E NG++F L+ C + + D G + + ++
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYA 579
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLS-WNSMLSVYADNGLFLDALEL 172
+VD G L +A +P + W S+LS + L +D EL
Sbjct: 580 CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSA-SKTHLRVDLAEL 628
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 226/510 (44%), Gaps = 64/510 (12%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACG--------------- 133
L++ C + + +G +H H+ G+ N ++N L+ Y CG
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 134 ----------------CLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
L A+ F ++P DV+SWN+M+ YA +G +AL +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIH---------------CCVI---------- 212
G K + SF G L K+ Q H C +I
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 213 --KMGFDNGSV---HVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGI 267
K FD +V H+ + LI Y K GD++ A + +P + +L+ + G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 268 VDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVS 327
+ ++F M+ G+ ++ TFS+ H I+ + V
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEI--HGYMIRTNVRPNAIVI 349
Query: 328 CSLIDAYLRSGHVLLSQKVFEQIPLPNVFCF-TSIINGFAWNGLGKQCLEMLEAMIRKGL 386
SLID Y +SG + S++VF + F ++I+ A +GLG + L ML+ MI+ +
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 387 KPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXX 446
+P+R T + +L CSHSGLVEEG F SM HGI PD++H++C++
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELM 469
Query: 447 XXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETG 506
+ P D +W+++L CR+H NE +G++AA L+ LDPE A ++ +S+ Y++ G
Sbjct: 470 RKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHG 529
Query: 507 EFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
++E +++ + R++ KE S I +
Sbjct: 530 KWELVEKLRGVMKKRRVNKEKAVSWIEIEK 559
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 143/308 (46%), Gaps = 36/308 (11%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
NLY +++V Y++ G++ A +FD +PER++ +WN ++ G+ + G E L Y E +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
++ N SF L+ C R Q HG V+ G++ +N+ ++ +++D Y+ CG +
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFL-SNVVLSCSIIDAYAKCGQM 230
Query: 136 SEAKKSFQAIPMEDVLSWNSMLSVYADNG-------LFLD-------------------- 168
AK+ F + ++D+ W +++S YA G LF +
Sbjct: 231 ESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQG 290
Query: 169 ----ALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQ 224
AL+L M G KP +F L S+ + G +IH +I+ ++ V
Sbjct: 291 SGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI-VI 349
Query: 225 SALIDMYGKCGDIKNAVSTYESLPMTSLECC--NSLMTSLLHCGIVDDVFEMFGLMVDEG 282
S+LIDMY K G ++ + + + +C N+++++L G+ M M+
Sbjct: 350 SSLIDMYSKSGSLEASERVFR-ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR 408
Query: 283 IGLDEVTF 290
+ + T
Sbjct: 409 VQPNRTTL 416
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 118/235 (50%), Gaps = 4/235 (1%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
+++I ++L+ Y +LG ++ A KLF E+PE+N +W ++ G+ G + L L+ ++
Sbjct: 244 DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
V+ +F + ++ G ++HG++I+ V N V ++L+D YS G L
Sbjct: 304 ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN-VRPNAIVISSLIDMYSKSGSL 362
Query: 136 SEAKKSFQAI-PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL 194
+++ F+ D + WN+M+S A +GL AL +L M + +P+ + V LN
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNA 422
Query: 195 SSKTGNALFGMQ-IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
S +G G++ ++ G H + LID+ G+ G K + E +P
Sbjct: 423 CSHSGLVEEGLRWFESMTVQHGIVPDQEHY-ACLIDLLGRAGCFKELMRKIEEMP 476
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 249/534 (46%), Gaps = 6/534 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
++ +K GF + GS LV ++ G ID A ++FD + ER++ TWN ++ +
Sbjct: 85 KTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
E + +Y + +NV + + + + S+ E + HG + +G +N+FV
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
+ALVD Y G EAK + +DV+ +++ Y+ G +A++ M
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 263
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
+P+ ++ L + G IH ++K GF++ ++ Q++L+ MY +C + +++
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFES-ALASQTSLLTMYLRCSLVDDSL 322
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
++ + + SL++ L+ G + F M+ + I + T S+
Sbjct: 323 RVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLA 382
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSI 361
H K G++ D LID Y + G +++ VF+ + +V ++
Sbjct: 383 MFEEGRQI--HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTM 440
Query: 362 INGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHG 421
I +A NG G++ L++ E MI GL+P+ VT L VL C++S LVEEG +F+S
Sbjct: 441 IYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DK 499
Query: 422 ISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAA 481
I DH++CMV + D V+W +LL +C+VHR + R
Sbjct: 500 IMLTNDHYACMVDLLGRAGRLEEAEMLTTEVIN-PDLVLWRTLLSACKVHRKVEMAERIT 558
Query: 482 KILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
+ +L ++P D + +SN Y+ TG++ +++K K+ K S + +N
Sbjct: 559 RKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEIN 612
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 150/350 (42%), Gaps = 15/350 (4%)
Query: 85 SFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQA 144
+F L+R C ++R + H++K G+ + LVD CG + A++ F
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE--ISGSKLVDASLKCGDIDYARQVFDG 124
Query: 145 IPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFG 204
+ +++WNS+++ + +A+E+ +M P + S
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLH 264
+ H + +G + +V V SAL+DMY K G + A + + + +L+
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 265 CGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDV 324
G + + F M+ E + +E T+++ H +K G+ES +
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYAS--VLISCGNLKDIGNGKLIHGLMVKSGFESAL 302
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK 384
+ SL+ YLR V S +VF+ I PN +TS+I+G NG + L M+R
Sbjct: 303 ASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD 362
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISP----DRDHFS 430
+KP+ T L GCS+ + EEGR +HGI DRD ++
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFEEGR-------QIHGIVTKYGFDRDKYA 405
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/572 (24%), Positives = 244/572 (42%), Gaps = 77/572 (13%)
Query: 19 IGSSLVGLYMRLGLIDLALKLFDELPE---RNLATWNLVLRGFCELGLFDELLGLYNEIK 75
+ ++L+ +Y RLGL+ A +F+ + +L WN +L+ GL++ L LY ++
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
+ +G ++R C F H VI++G + N+ V N L+ Y G +
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIG-LKENLHVVNELLTLYPKAGRM 209
Query: 136 SEAKKSFQAIPMEDVLSWN-----------------------------------SMLSVY 160
+A F +P+ + +SWN S+LS +
Sbjct: 210 GDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCH 269
Query: 161 ADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGS 220
+ G F D L+ ++M+ G S + F ++ ++ ++H VIK GF+
Sbjct: 270 SQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEE-Y 328
Query: 221 VHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVD 280
+ ++ALI +YGK G +K+A + + +E NSL+TS + G +D+ +F + +
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 281 -----------------------EGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCC--- 314
+G G D + + C
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELP 448
Query: 315 AIKLGYE-----------SDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
A+ LG E ++ V +L++ Y + G + VFE I ++ + SII
Sbjct: 449 ALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIK 508
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
G+ +G ++ L M + MI G PD + + VL+ CSH+GLVE+GR +F SM G+
Sbjct: 509 GYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLE 568
Query: 424 PDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKI 483
P ++H++C+V P + +LL SCR+H+N + A
Sbjct: 569 PQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQ 628
Query: 484 LLGLDPEDFAVHLQVSNFYSETGEFEASMQIK 515
L L+PE ++ +SN YS G +E S ++
Sbjct: 629 LSVLEPERTGSYMLLSNIYSAGGRWEESANVR 660
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 148/362 (40%), Gaps = 76/362 (20%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGF---- 58
+ H + I++G NL++ + L+ LY + G + A LF E+P RN +WN++++GF
Sbjct: 179 AFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEY 238
Query: 59 -CE------------------------------LGLFDELLGLYNEIKLDNVELNGLSFC 87
CE G F+++L ++ +++ ++G +
Sbjct: 239 DCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALA 298
Query: 88 YLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPM 147
C+ ++HG+VIK G+ + + NAL+ Y G + +A+ F+ I
Sbjct: 299 VFFSVCAELEALSIAEKVHGYVIKGGF-EEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 148 EDVLSWNSMLSVYADNG-------LFL--------------------------------D 168
+ + SWNS+++ + D G LF D
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD 417
Query: 169 ALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALI 228
+LE MQF + + L++ ++ G +IH VI+ ++ VQ+AL+
Sbjct: 418 SLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSE-NILVQNALV 476
Query: 229 DMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEV 288
+MY KCG + +E++ L NS++ G + MF M+ G D +
Sbjct: 477 NMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGI 536
Query: 289 TF 290
Sbjct: 537 AL 538
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 5/215 (2%)
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCG---DIKNAVSTYESLPMTSLECCNSLMTSL 262
Q+H V+ F S + + LI +Y + G D +N T + ++ L NS++ +
Sbjct: 74 QVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKAN 133
Query: 263 LHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYES 322
+ G+ ++ E++ M G+ D + H I++G +
Sbjct: 134 VSHGLYENALELYRGMRQRGLTGD--GYILPLILRACRYLGRFGLCRAFHTQVIQIGLKE 191
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
++ V L+ Y ++G + + +F ++P+ N + +I GF+ + +++ E M
Sbjct: 192 NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQ 251
Query: 383 RKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSME 417
R+ KPD VT+ VL+ S G E+ F+ M
Sbjct: 252 REEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 72/145 (49%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H I+ N+ + ++LV +Y + GL+ +F+ + +++L +WN +++G+ G
Sbjct: 456 IHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGF 515
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
++ L +++ + +G++ ++ CS+ ++G ++ + K ++
Sbjct: 516 AEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYA 575
Query: 124 ALVDFYSACGCLSEAKKSFQAIPME 148
+VD G L EA + + +PME
Sbjct: 576 CIVDLLGRVGFLKEASEIVKNMPME 600
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 223/466 (47%), Gaps = 40/466 (8%)
Query: 102 GSQLHGHVIKVGW-VDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVY 160
G ++H +IK G+ D NI + L+ + CGCLS A++ F +P + ++N M+S Y
Sbjct: 53 GKKIHADIIKTGFQPDLNISIK--LLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 161 ADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQ-----IHCCVIKMG 215
+GL + L L+ M + G+K + L S+ G+ + + +H +IK
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 216 FDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMF 275
+ V + +AL+D Y K G +++A + +E++ ++ CC S+++ ++ G V+D E+F
Sbjct: 171 VELDDVLI-TALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIF 229
Query: 276 GLM-------------------------VDEGIGLDEVTFSTXXXXXXX-----XXXXXX 305
VD I + F
Sbjct: 230 NTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSH 289
Query: 306 XXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGF 365
H +K G + + + SL+D Y + G + +++VF+Q+ NVF +TS+I+G+
Sbjct: 290 EVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Query: 366 AWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPD 425
NG ++ LE+ M ++P+ VTFL L+ CSHSGLV++G +F SM+ + + P
Sbjct: 350 GKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 426 RDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILL 485
+H++C+V P R D +W++LL SC +H N + AA L
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELF 469
Query: 486 GLDPEDFA-VHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHS 530
L+ + +L +SN Y+ +++ +I+E+ R+++K IG S
Sbjct: 470 KLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 49/329 (14%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H IK GF +L I L+ L+++ G + A ++FDELP+ L+ +N ++ G+ + GL
Sbjct: 56 IHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGL 115
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQL----------HGHVIKVG 113
ELL L + + +G + +++ SN R GS + H +IK
Sbjct: 116 VKELLLLVQRMSYSGEKADGYTLSMVLKA-SNSR----GSTMILPRSLCRLVHARIIKCD 170
Query: 114 WVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALEL- 172
V+ + + ALVD Y G L A+ F+ + E+V+ SM+S Y + G DA E+
Sbjct: 171 -VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIF 229
Query: 173 ------------------------------LYI-MQFWGKKPSIRSFVGFLNLSSKTGNA 201
+YI MQ G P+I +F + S +
Sbjct: 230 NTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSH 289
Query: 202 LFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTS 261
G Q+H ++K G + + S+L+DMY KCG I +A ++ + ++ S++
Sbjct: 290 EVGQQVHAQIMKSGVYT-HIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDG 348
Query: 262 LLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
G ++ E+F M + I + VTF
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEPNYVTF 377
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 118/229 (51%), Gaps = 2/229 (0%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG-LFDELLGLYNEIKLDNV 79
+S++ YM G ++ A ++F+ +++ +N ++ GF G + +Y ++
Sbjct: 210 TSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGF 269
Query: 80 ELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
N +F +I CS + G Q+H ++K G V T+I + ++L+D Y+ CG +++A+
Sbjct: 270 HPNISTFASVIGACSVLTSHEVGQQVHAQIMKSG-VYTHIKMGSSLLDMYAKCGGINDAR 328
Query: 140 KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
+ F + ++V SW SM+ Y NG +ALEL M+ + +P+ +F+G L+ S +G
Sbjct: 329 RVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSG 388
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
G +I + + + + ++D+ G+ GD+ A ++P
Sbjct: 389 LVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMP 437
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 84/158 (53%), Gaps = 1/158 (0%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH + +K G ++ +GSSL+ +Y + G I+ A ++FD++ E+N+ +W ++ G+ +
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G +E L L+ +K +E N ++F + CS+ D+G ++ + + + +
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 122 ANALVDFYSACGCLSEAKKSFQAIP-MEDVLSWNSMLS 158
+VD G L++A + +A+P D W ++LS
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLS 450
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 238/533 (44%), Gaps = 37/533 (6%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+VH R I N +G L+ Y L + A K+FDE+PERN+ N+++R + G
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+ E + ++ + NV + +F +++ CS G ++HG KVG T +FV
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST-LFVG 178
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
N LV Y CG LSEA+ + DV+SWNS++ YA N F DALE+ M+
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
+ L S T M + KMG S+ + +I +Y +KNA
Sbjct: 239 HDAGTMASLLPAVSNTTTENV-MYVKDMFFKMG--KKSLVSWNVMIGVY-----MKNA-- 288
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+P+ ++E ++ M +G D V+ ++
Sbjct: 289 ----MPVEAVE--------------------LYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
+ KL ++ + +LID Y + G + ++ VFE + +V +T++I
Sbjct: 325 LSLGKKIHGYIERKKLI--PNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
+ + ++G G + + + GL PD + F+ L CSH+GL+EEGR F M + I
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 423 SPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAK 482
+P +H +CMV + +W +LL +CRVH + +G AA
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 483 ILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
L L PE ++ +SN Y++ G +E I+ I ++ + K G S + +N
Sbjct: 503 KLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 137/517 (26%), Positives = 228/517 (44%), Gaps = 7/517 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H K + Y + L Y + A KLFD PER++ WN ++R + +
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQ-LHGHVIKVGWVDTNIF 120
F +L L+++I + + ++ L RG S + F +G + +HG I G + +
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFS-ESFDTKGLRCIHGIAIVSG-LGFDQI 142
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
+A+V YS G + EA K F +IP D+ WN M+ Y G + + L +MQ G
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+P+ + V + L +H +K+ D+ S +V AL++MY +C I +A
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS-YVGCALVNMYSRCMCIASA 261
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXX 300
S + S+ L C+SL+T CG + +F + G D V +
Sbjct: 262 CSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAEL 321
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
H I+LG E D+ V +LID Y + G + + +F IP N+ F S
Sbjct: 322 SDSVSGKEV--HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNS 379
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLH 420
+I G +G E ++ GL PD +TF +L C HSGL+ +G+ +F M+S
Sbjct: 380 LILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEF 439
Query: 421 GISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRA 480
GI P +H+ MV D + +LL C VH N +
Sbjct: 440 GIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVV 499
Query: 481 AKILLGLDPEDFAVH-LQVSNFYSETGEFEASMQIKE 516
A+ + E +V+ + +SN Y+ G ++ ++++
Sbjct: 500 AENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRD 536
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 243/514 (47%), Gaps = 13/514 (2%)
Query: 23 LVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL-GLFDELLGLYNEIKLDNVEL 81
L+ + LG + + LF E N ++N ++RG + L LY +K ++
Sbjct: 67 LIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKP 126
Query: 82 NGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKS 141
+ ++ ++ C+ G +H + KVG ++ ++ + ++L+ Y+ CG + A+K
Sbjct: 127 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVG-LERDVHINHSLIMMYAKCGQVGYARKL 185
Query: 142 FQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNA 201
F I D +SWNSM+S Y++ G DA++L M+ G +P R+ V L S G+
Sbjct: 186 FDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDL 245
Query: 202 LFGMQIHCCVI--KMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLM 259
G + I K+G S + S LI MYGKCGD+ +A + + +++
Sbjct: 246 RTGRLLEEMAITKKIGL---STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMI 302
Query: 260 TSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLG 319
T G + F++F M G+ D T ST H A +L
Sbjct: 303 TVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETH--ASELS 360
Query: 320 YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLE 379
+ ++ V+ L+D Y + G V + +VFE +P+ N + ++I +A G K+ L + +
Sbjct: 361 LQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFD 420
Query: 380 AMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXX 439
M + P +TF+ VL+ C H+GLV +G F+ M S+ G+ P +H++ ++
Sbjct: 421 RM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 477
Query: 440 XXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGL-DPEDFAVHLQV 498
+ PG+ D +M +++L +C ++ + +A ++L+ + + ++ ++
Sbjct: 478 GMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVIS 537
Query: 499 SNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
SN ++ ++ S +++ + R + K G S I
Sbjct: 538 SNVLADMKMWDESAKMRALMRDRGVVKTPGCSWI 571
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 149/291 (51%), Gaps = 9/291 (3%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
SVH K+G +++I SL+ +Y + G + A KLFDE+ ER+ +WN ++ G+ E
Sbjct: 148 RSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEA 207
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVI--KVGWVDTNI 119
G + + L+ +++ + E + + ++ CS+ G L I K+G +
Sbjct: 208 GYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG---LST 264
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
F+ + L+ Y CG L A++ F + +D ++W +M++VY+ NG +A +L + M+
Sbjct: 265 FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT 324
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
G P + L+ G G QI ++ + +++V + L+DMYGKCG ++
Sbjct: 325 GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH-NIYVATGLVDMYGKCGRVEE 383
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
A+ +E++P+ + N+++T+ H G + +F M + ++TF
Sbjct: 384 ALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITF 431
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+ A +L N+Y+ + LV +Y + G ++ AL++F+ +P +N ATWN ++ +
Sbjct: 350 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 409
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNK-------RFFDEGSQLHGHVIKVGW 114
G E L L++ + +V + ++F ++ C + R+F E S + G V K+
Sbjct: 410 GHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEH 466
Query: 115 VDTNIFVANALVDFYSACGCLSEAKKSFQAIP 146
TNI +D S G L EA + + P
Sbjct: 467 Y-TNI------IDLLSRAGMLDEAWEFMERFP 491
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 240/538 (44%), Gaps = 47/538 (8%)
Query: 33 IDLALKLF-DELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR 91
+DLA LF + P N+ +N ++ +E GLY+ + V + +F YL++
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMK 141
Query: 92 GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVL 151
S F E Q+H H+I G + ++ N+LV FY G A+K F +P DV
Sbjct: 142 ASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS 198
Query: 152 SWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCV 211
S+N M+ YA G L+AL+L + M G +P + + L + G +H +
Sbjct: 199 SFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWI 258
Query: 212 IKMG-FDNGSVHVQSALIDMYGKC-------------------------------GDIKN 239
+ G + ++ + +AL+DMY KC GD++
Sbjct: 259 ERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEA 318
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCG----IVDDVFEMFGLMVDEGIGLDEVTFSTXXX 295
A + ++ +P L NSL+ G V ++F + + + E + D VT +
Sbjct: 319 AQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELF--YEMTIVEKVKPDRVTMVSLIS 376
Query: 296 XXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNV 355
H I+L + D +S +LID Y + G + + VF+ +V
Sbjct: 377 GAANNGELSHGRWV--HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDV 434
Query: 356 FCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNS 415
+TS+I G A++G G+Q L++ M +G+ P+ VT L VLT CSHSGLVEEG VFN
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH 494
Query: 416 MESLHGISPDRDHFSCMVXXX-XXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNE 474
M+ G P+ +H+ +V + P R MW S+L +CR +
Sbjct: 495 MKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDI 554
Query: 475 TVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
A LL L+PE ++ +SN Y+ G + S + +E R + K G+S +
Sbjct: 555 ETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSV 612
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 177/400 (44%), Gaps = 39/400 (9%)
Query: 2 NSVHCRAIKLG-FGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE 60
+HC I G Y+ +SLV YM LG +A K+F +P +++++N+++ G+ +
Sbjct: 150 KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWV-DTNI 119
G E L LY ++ D +E + + L+ C + G +HG + + G V +N+
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 120 FVANALVDFYSAC-------------------------------GCLSEAKKSFQAIPME 148
++NAL+D Y C G + A+ F +P
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 149 DVLSWNSMLSVYADNGLFLDAL-ELLYIMQFWGK-KPSIRSFVGFLNLSSKTGNALFGMQ 206
D++SWNS+L Y+ G + EL Y M K KP + V ++ ++ G G
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW 389
Query: 207 IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCG 266
+H VI++ G + SALIDMY KCG I+ A +++ + S++T L G
Sbjct: 390 VHGLVIRLQL-KGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHG 448
Query: 267 IVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSV 326
++FG M +EG+ + VT H K G++ +
Sbjct: 449 NGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH-MKDKFGFDPETEH 507
Query: 327 SCSLIDAYLRSGHVLLSQKVFE-QIPL-PNVFCFTSIING 364
SL+D R+G V ++ + + ++P+ P+ + SI++
Sbjct: 508 YGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 238/533 (44%), Gaps = 37/533 (6%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+VH R I N +G L+ Y L + A K+FDE+PERN+ N+++R + G
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+ E + ++ + NV + +F +++ CS G ++HG KVG T +FV
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST-LFVG 178
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
N LV Y CG LSEA+ + DV+SWNS++ YA N F DALE+ M+
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
+ L S T M + KMG S+ + +I +Y +KNA
Sbjct: 239 HDAGTMASLLPAVSNTTTENV-MYVKDMFFKMG--KKSLVSWNVMIGVY-----MKNA-- 288
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+P+ ++E ++ M +G D V+ ++
Sbjct: 289 ----MPVEAVE--------------------LYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
+ KL ++ + +LID Y + G + ++ VFE + +V +T++I
Sbjct: 325 LSLGKKIHGYIERKKLI--PNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
+ + ++G G + + + GL PD + F+ L CSH+GL+EEGR F M + I
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 423 SPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAK 482
+P +H +CMV + +W +LL +CRVH + +G AA
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 483 ILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
L L PE ++ +SN Y++ G +E I+ I ++ + K G S + +N
Sbjct: 503 KLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/571 (22%), Positives = 257/571 (45%), Gaps = 70/571 (12%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGF---CELGLFDELLGLYN 72
++++ +SLV Y+R+G I+ A LF + ++L +WN+V+ G+ CE F +N
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEW--FKAFQLFHN 319
Query: 73 EIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSAC 132
+ +V + ++ ++ C+ G ++H ++++ ++ + V NAL+ FY+
Sbjct: 320 LVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARF 379
Query: 133 GCLSEAKKSFQAIPMEDVLSWNSMLSVYADN----------------GLFLDALELLYIM 176
G S A +F + +D++SWN++L +AD+ + LD++ +L ++
Sbjct: 380 GDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLL 439
Query: 177 QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGF--DNGSVHVQSALIDMYGKC 234
+F I ++H +K G D + +AL+D Y KC
Sbjct: 440 KFCINVQGIGKV----------------KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKC 483
Query: 235 GDIKNAVSTYESLP-MTSLECCNSLMTSLLHCGIVDDVFEMF-----------GLMV--- 279
G+++ A + L +L NSL++ ++ G DD +F LMV
Sbjct: 484 GNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIY 543
Query: 280 ------DEGIG---------LDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDV 324
+E IG + T + H I+ G D+
Sbjct: 544 AESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDI 602
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK 384
+ +L+D Y + G + + VF+ ++ FT+++ G+A +G GK+ L + M
Sbjct: 603 RLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTES 662
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXX 444
+KPD V +LT C H+GL+++G +++S+ ++HG+ P + ++C V
Sbjct: 663 NIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDD 722
Query: 445 XXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSE 504
Q P + +W +LLR+C + +G A LL + +D H+ +SN Y+
Sbjct: 723 AYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAA 782
Query: 505 TGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
++E M+++ + ++M K G S + ++
Sbjct: 783 DAKWEGVMELRNLMKKKEMKKPAGCSWLEVD 813
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 173/377 (45%), Gaps = 11/377 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLI-DLALKLFDELPERNLATWNLVLRGFCE 60
S+H IK G + +G++LV +Y + G I A FD + ++++ +WN ++ GF E
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCS--NKRFF-DEGSQLHGHVIKVGWVDT 117
+ + + + + E N + ++ C+ +K G Q+H +V++ W+ T
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQT 261
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
++FV N+LV FY G + EA F + +D++SWN +++ YA N + A +L + +
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 178 FWGK-KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGD 236
G P + + L + ++ + G +IH +++ + V +ALI Y + GD
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381
Query: 237 IKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX 296
A + + + N+++ + + +++E I LD VT +
Sbjct: 382 TSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILS--LL 439
Query: 297 XXXXXXXXXXXXXXXHCCAIKLGY---ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP-L 352
H ++K G E + + +L+DAY + G+V + K+F +
Sbjct: 440 KFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSER 499
Query: 353 PNVFCFTSIINGFAWNG 369
+ + S+++G+ +G
Sbjct: 500 RTLVSYNSLLSGYVNSG 516
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 174/405 (42%), Gaps = 11/405 (2%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
++H KLG + S++ +Y + +D K+F ++ + WN+VL G +
Sbjct: 42 ALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGL-SVS 100
Query: 63 LFDELLGLYNEIKL-DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
E + + + D + + ++F ++ C G +H ++IK G ++ + V
Sbjct: 101 CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAG-LEKDTLV 159
Query: 122 ANALVDFYSACG-CLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
NALV Y+ G +A +F I +DV+SWN++++ +++N + DA +M
Sbjct: 160 GNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEP 219
Query: 181 KKPSIRSFVGFLNLSSKTGNALF---GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
+P+ + L + + + G QIH V++ + V V ++L+ Y + G I
Sbjct: 220 TEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRI 279
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG-IGLDEVTFSTXXXX 296
+ A S + + L N ++ F++F +V +G + D VT +
Sbjct: 280 EEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIIS--IL 337
Query: 297 XXXXXXXXXXXXXXXHCCAIKLGY-ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNV 355
H ++ Y D SV +LI Y R G + F + ++
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI 397
Query: 356 FCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGC 400
+ +I++ FA + Q L +L ++ + + D VT L +L C
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 152/334 (45%), Gaps = 16/334 (4%)
Query: 86 FCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAI 145
F +++ C++ G LHG V K+G + + V+ ++++ Y+ C + + +K F+ +
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACS-EVSKSVLNMYAKCRRMDDCQKMFRQM 82
Query: 146 PMEDVLSWNSMLSVYADNGLFL----DALELLYIMQFWGK-KPSIRSFVGFLNLSSKTGN 200
D + WN +L+ GL + + + M F + KPS +F L L + G+
Sbjct: 83 DSLDPVVWNIVLT-----GLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGD 137
Query: 201 ALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI-KNAVSTYESLPMTSLECCNSLM 259
+ G +H +IK G + ++ V +AL+ MY K G I +A + ++ + + N+++
Sbjct: 138 SYNGKSMHSYIIKAGLEKDTL-VGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 260 TSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX-XXXXXXXXXXXXXXXHCCAIKL 318
++ D F F LM+ E + T + H ++
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQR 256
Query: 319 GY-ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEM 377
+ ++ V V SL+ YLR G + + +F ++ ++ + +I G+A N + ++
Sbjct: 257 SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQL 316
Query: 378 LEAMIRKG-LKPDRVTFLCVLTGCSHSGLVEEGR 410
++ KG + PD VT + +L C+ + G+
Sbjct: 317 FHNLVHKGDVSPDSVTIISILPVCAQLTDLASGK 350
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 223/511 (43%), Gaps = 45/511 (8%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYM---RLGLIDLALKLFDELPERNLATWNLVLRGF 58
H +K G + + S LV + A + + + N T N V+R +
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 59 CELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
+ L ++ E+ L V + SF ++++ C+ F+EG Q+HG IK G V T+
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLV-TD 174
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
+FV N LV+ Y G A+K +P+ D +SWNS+LS Y + GL +A L M+
Sbjct: 175 VFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME- 233
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
+V + +I Y G +K
Sbjct: 234 ---------------------------------------ERNVESWNFMISGYAAAGLVK 254
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
A ++S+P+ + N+++T+ H G ++V E+F M+D+ + F+
Sbjct: 255 EAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPD-GFTLVSVLSA 313
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCF 358
H K G E + ++ +L+D Y + G + + +VF +V +
Sbjct: 314 CASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTW 373
Query: 359 TSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES 418
SII+ + +GLGK LE+ M+ +G KP+ +TF+ VL+ C+H G++++ R +F M S
Sbjct: 374 NSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSS 433
Query: 419 LHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGR 478
++ + P +H+ CMV + P ++ SLL +C+
Sbjct: 434 VYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAE 493
Query: 479 RAAKILLGLDPEDFAVHLQVSNFYSETGEFE 509
R A LL L+ D + + Q+SN Y+ G +E
Sbjct: 494 RIANRLLELNLRDSSGYAQMSNLYASDGRWE 524
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 139/573 (24%), Positives = 248/573 (43%), Gaps = 76/573 (13%)
Query: 23 LVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE---LGLFDELLGLYNEIKL--- 76
++ Y+R G +LA KLFDE+PER+L +WN++++G+ LG EL + E +
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW 160
Query: 77 --------------------------DNVELNGL-----------SFCYLIRGCSNKRFF 99
++V N L C L + N
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV 220
Query: 100 DEGSQLHGHVIKVGWVDTNIFVA----------NALVDFYSACGCLSEAKKSFQAIPMED 149
L G V K V+ F N ++ Y+ G + EA++ F P++D
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 150 VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHC 209
V +W +M+S Y N + +A EL K P R+ V + NA+ +
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELF------DKMPE-RNEVSW--------NAMLAGYVQG 325
Query: 210 CVIKMG---FDN---GSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLL 263
++M FD +V + +I Y +CG I A + ++ +P +++
Sbjct: 326 ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 385
Query: 264 HCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESD 323
G + +F M EG L+ +FS+ H +K GYE+
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL--HGRLVKGGYETG 443
Query: 324 VSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIR 383
V +L+ Y + G + + +F+++ ++ + ++I G++ +G G+ L E+M R
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 384 KGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXX 443
+GLKPD T + VL+ CSH+GLV++GR F +M +G+ P+ H++CMV
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563
Query: 444 XXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYS 503
P D +W +LL + RVH N + AA + ++PE+ +++ +SN Y+
Sbjct: 564 DAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623
Query: 504 ETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
+G + +++ + + K G+S I + +
Sbjct: 624 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQN 656
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 124/234 (52%), Gaps = 3/234 (1%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
N+ ++++ Y + G I A LFD++P+R+ +W ++ G+ + G E L L+ +++
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
+ LN SF + C++ + G QLHG ++K G+ +T FV NAL+ Y CG +
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY-ETGCFVGNALLLMYCKCGSI 460
Query: 136 SEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLS 195
EA F+ + +D++SWN+M++ Y+ +G AL M+ G KP + V L+
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 196 SKTGNALFGMQ-IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
S TG G Q + G S H + ++D+ G+ G +++A + +++P
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHY-ACMVDLLGRAGLLEDAHNLMKNMP 573
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 85/179 (47%), Gaps = 4/179 (2%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+H R +K G+ ++G++L+ +Y + G I+ A LF E+ +++ +WN ++ G+ G
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+ L + +K + ++ + + ++ CS+ D+G Q + + V N
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHY 549
Query: 123 NALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSML---SVYADNGLFLDALELLYIMQ 177
+VD G L +A + +P E D W ++L V+ + L A + ++ M+
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAME 608
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 201/415 (48%), Gaps = 5/415 (1%)
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
F+ + LV Y G A+K F +P D++SWNS++S Y+ G E+L M
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 180 --GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
G +P+ +F+ ++ G+ G IH V+K G V V +A I+ YGK GD+
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLE-EVKVVNAFINWYGKTGDL 185
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXX 297
++ +E L + +L N+++ L G+ + F + G D+ TF
Sbjct: 186 TSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATF--LAVLR 243
Query: 298 XXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC 357
H + G+ + ++ +L+D Y + G + S VF +I P+
Sbjct: 244 SCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMA 303
Query: 358 FTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSME 417
+T+++ +A +G G+ ++ E M+ G+ PD VTF +L CSHSGLVEEG+ F +M
Sbjct: 304 WTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMS 363
Query: 418 SLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVG 477
+ I P DH+SCMV + P +W +LL +CRV+++ +G
Sbjct: 364 KRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLG 423
Query: 478 RRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+AA+ L L+P D ++ +SN YS +G ++ + +I+ + + + + G S I
Sbjct: 424 TKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYI 478
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 150/290 (51%), Gaps = 4/290 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC+ +K + +IG LVG Y+RLG A KLFDE+PER+L +WN ++ G+ G
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 64 FDELLGLYNEIKLDNV--ELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
+ + + + + V N ++F +I C +EG +HG V+K G ++ + V
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLE-EVKV 171
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
NA +++Y G L+ + K F+ + +++++SWN+M+ ++ NGL L + + G
Sbjct: 172 VNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGH 231
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
+P +F+ L G IH ++ GF +G+ + +AL+D+Y K G ++++
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGF-SGNKCITTALLDLYSKLGRLEDSS 290
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFS 291
+ + + +++ + G D + F LMV GI D VTF+
Sbjct: 291 TVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFT 340
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +K G + + ++ + Y + G + + KLF++L +NL +WN ++ + GL
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGL 215
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
++ L +N + E + +F ++R C + +HG +I G N +
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHG-LIMFGGFSGNKCITT 274
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
AL+D YS G L ++ F I D ++W +ML+ YA +G DA++ +M +G P
Sbjct: 275 ALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISP 334
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+F LN S +G G + K + + S ++D+ G+ G +++A
Sbjct: 335 DHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGL 394
Query: 244 YESLPM 249
+ +PM
Sbjct: 395 IKEMPM 400
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLY 71
GF N I ++L+ LY +LG ++ + +F E+ + W +L + G + + +
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 72 NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSA 131
+ + + ++F +L+ CS+ +EG + K +D + + +VD
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
Query: 132 CGCLSEAKKSFQAIPMEDVLS-WNSML---SVYADNGLFLDALELLYIMQFWGKKPSIRS 187
G L +A + +PME W ++L VY D L A E L+ ++ R+
Sbjct: 385 SGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELE----PRDGRN 440
Query: 188 FVGFLNLSSKTG 199
+V N+ S +G
Sbjct: 441 YVMLSNIYSASG 452
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 218/454 (48%), Gaps = 14/454 (3%)
Query: 84 LSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQ 143
+F + + C EG Q+HG V K+G+ D +I+V N+LV FY CG A K F
Sbjct: 107 FTFPPVFKACGKFSGIREGKQIHGIVTKMGFYD-DIYVQNSLVHFYGVCGESRNACKVFG 165
Query: 144 AIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF 203
+P+ DV+SW +++ + GL+ +AL+ M +P++ ++V L S + G
Sbjct: 166 EMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSL 222
Query: 204 GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLL 263
G IH ++K S+ +ALIDMY KC + +A+ + L NS+++ L+
Sbjct: 223 GKGIHGLILKRA-SLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLV 281
Query: 264 HCGIVDDVFEMFGLM-VDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYES 322
HC + ++F LM GI D ++ H + G +
Sbjct: 282 HCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV--HEYILTAGIKW 339
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
D + +++D Y + G++ + ++F I NVF + +++ G A +G G + L E M+
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 383 RKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESL-HGISPDRDHFSCMVXXXXXXXX 441
+ G KP+ VTFL L C H+GLV+EGR F+ M+S + + P +H+ CM+
Sbjct: 400 KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGL 459
Query: 442 XXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKIL---LGLDPEDFAVHLQV 498
P + D + ++L +C+ T+ +IL L ++ ED V++ +
Sbjct: 460 LDEALELVKAMPVKPDVRICGAILSACK--NRGTLMELPKEILDSFLDIEFEDSGVYVLL 517
Query: 499 SNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
SN ++ ++ +I+ + + ++K G S I
Sbjct: 518 SNIFAANRRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 178/408 (43%), Gaps = 40/408 (9%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H K+GF ++Y+ +SLV Y G A K+F E+P R++ +W ++ GF
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
GL+ E L ++++ +VE N ++ ++ G +HG ++K + ++
Sbjct: 186 GLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL-ISLET 241
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF-WG 180
NAL+D Y C LS+A + F + +D +SWNSM+S +A++L +MQ G
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
KP L+ + G G +H ++ G H+ +A++DMY KCG I+ A
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGI-KWDTHIGTAIVDMYAKCGYIETA 360
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXX 300
+ + + ++ N+L+ L G + F MV G + VTF
Sbjct: 361 LEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTF---------- 410
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
CC L+D R H + S+ E P + +
Sbjct: 411 ------LAALNACC------------HTGLVDEGRRYFHKMKSR---EYNLFPKLEHYGC 449
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEE 408
+I+ GL + LE+++AM +KPD +L+ C + G + E
Sbjct: 450 MIDLLCRAGLLDEALELVKAM---PVKPDVRICGAILSACKNRGTLME 494
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 134/333 (40%), Gaps = 25/333 (7%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
LI CS+ R F Q+ +I + ++ + N +V F + S+ ++ +
Sbjct: 12 LISRCSSLRVF---KQIQTQLITRDLLRDDLII-NKVVTFLGKSADFA----SYSSVILH 63
Query: 149 DV------LSWNSMLSVYA--DNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGN 200
+ S+N++LS YA D ++ G P + +F K
Sbjct: 64 SIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSN--GFSPDMFTFPPVFKACGKFSG 121
Query: 201 ALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMT 260
G QIH V KMGF + ++VQ++L+ YG CG+ +NA + +P+ + ++T
Sbjct: 122 IREGKQIHGIVTKMGFYD-DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIIT 180
Query: 261 SLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGY 320
G+ + + F M ++ + H +K
Sbjct: 181 GFTRTGLYKEALDTFSKM-----DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRAS 235
Query: 321 ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEA 380
+ +LID Y++ + + +VF ++ + + S+I+G K+ +++
Sbjct: 236 LISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSL 295
Query: 381 M-IRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
M G+KPD VL+ C+ G V+ GR V
Sbjct: 296 MQTSSGIKPDGHILTSVLSACASLGAVDHGRWV 328
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/579 (23%), Positives = 244/579 (42%), Gaps = 69/579 (11%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
+S + + G I A ++FD +PE + WN +L + LGL E + L+ +++ + +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 81 LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKK 140
+ SF ++ C++ G ++ VI+ G+ ++ V N+L+D Y C A K
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFC-ASLPVNNSLIDMYGKCSDTLSANK 126
Query: 141 SFQ---------------------------------AIPMEDVLSWNSMLSVYADNGLFL 167
F+ +P +WN M+S +A G
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 168 DALELLYIMQFWGKKPSIRSFVGFLNL-SSKTGNALFGMQIHCCVIKMGFDNGSVHVQSA 226
L L M KP +F +N S+ + N ++G +H ++K G+ + +V +++
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGW-SSAVEAKNS 245
Query: 227 LIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGI--- 283
++ Y K G +A+ ES+ + + NS++ + + G + E+F L ++ I
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 284 --------------------------GLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIK 317
G+D F+ H C I
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 318 LGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEM 377
G++ V +L++ Y + G + + + F I ++ + +++ F +GL Q L++
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKL 425
Query: 378 LEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXX- 436
+ MI G+KPD VTF+ +LT CSHSGLVEEG ++F SM + I + DH +CM+
Sbjct: 426 YDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFG 485
Query: 437 ---XXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFA 493
+ W +LL +C H + +GR +K+L +P +
Sbjct: 486 RGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEM 545
Query: 494 VHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ +SN Y TG ++ ++ + R M K G S I
Sbjct: 546 SFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWI 584
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H I GF Y+G++LV LY + G I A + F ++ ++L +WN +L F GL
Sbjct: 359 IHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGL 418
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
D+ L LY+ + ++ + ++F L+ CS+ +EG + ++K + +
Sbjct: 419 ADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVT 478
Query: 124 ALVDFYSACGCLSEAK 139
++D + G L+EAK
Sbjct: 479 CMIDMFGRGGHLAEAK 494
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 250/521 (47%), Gaps = 18/521 (3%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDE--LPERNLATWNLVLRGFC 59
VH IK GF + ++L+ +Y ++ A +F+E + R+ T+N+V+ G
Sbjct: 209 KQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA 268
Query: 60 ELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNI 119
DE L ++ ++ ++ L+F ++ CS G Q+HG IK G+ +
Sbjct: 269 GFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGY-EKYT 323
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
V+NA + YS+ A K F+++ +D+++WN+M+S Y L A+ + M
Sbjct: 324 LVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHII 383
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
G KP +F G L +S + L + C+IK G + + + +ALI Y K G I+
Sbjct: 384 GVKPDEFTF-GSLLATSLDLDVL--EMVQACIIKFGL-SSKIEISNALISAYSKNGQIEK 439
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
A +E +L N++++ H G + E F +++ + + ++
Sbjct: 440 ADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFT 359
H ++ G + + +LI+ Y + G + S +VF Q+ +V +
Sbjct: 500 VSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWN 559
Query: 360 SIINGFAWNGLGKQCLEMLEAMIRKG-LKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES 418
S+I+ ++ +G G+ + + M +G + PD TF VL+ CSH+GLVEEG +FNSM
Sbjct: 560 SLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVE 619
Query: 419 LHGISPDRDHFSCMVXXXXXX---XXXXXXXXXXXQTPG-RGDCVMWSSLLRSCRVHRNE 474
HG+ + DHFSC+V +T G R D +W +L +C H +
Sbjct: 620 FHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVD--VWWALFSACAAHGDL 677
Query: 475 TVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIK 515
+G+ AK+L+ + +D +V++Q+SN Y+ G ++ + + +
Sbjct: 678 KLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETR 718
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 191/436 (43%), Gaps = 54/436 (12%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGL------------------------------- 32
VHC AI+ G + ++ ++L+ LY RLG
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 33 IDLALKLFDELPER-NLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR 91
I+ A ++FD++PER ++A WN ++ G E G + + L+ E+ V + F ++
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 92 GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQA--IPMED 149
C D G Q+H VIK G+ + V NAL+ Y C + +A F+ + + D
Sbjct: 199 MCDYGS-LDFGKQVHSLVIKAGFFIASS-VVNALITMYFNCQVVVDACLVFEETDVAVRD 256
Query: 150 VLSWNSMLSVYADNGLFLDALELLYIMQFWGK-KPSIRSFVGFLNLSSKTGNALFGMQIH 208
+++N ++ A G D L++ +P+ +FV + S A G Q+H
Sbjct: 257 QVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVH 311
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
IK G++ ++ V +A + MY D A +ESL L N++++S +
Sbjct: 312 GLAIKTGYEKYTL-VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLG 370
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
++ M G+ DE TF + C IK G S + +S
Sbjct: 371 KSAMSVYKRMHIIGVKPDEFTFGS-----LLATSLDLDVLEMVQACIIKFGLSSKIEISN 425
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLE----MLEAMIRK 384
+LI AY ++G + + +FE+ N+ + +II+GF NG + LE +LE+ +R
Sbjct: 426 ALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR- 484
Query: 385 GLKPDRVTFLCVLTGC 400
+ PD T +L+ C
Sbjct: 485 -ILPDAYTLSTLLSIC 499
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/505 (27%), Positives = 252/505 (49%), Gaps = 26/505 (5%)
Query: 39 LFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRF 98
LFDELP+R+L++ N L G ++ L L+ +I + +L+ +F ++ CS +
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 99 FDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLS 158
+ G Q+H +IK G +T AL+D YS G L ++ + F+++ +D++SWN++LS
Sbjct: 100 PETGRQVHALMIKQG-AETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLS 158
Query: 159 VYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF----GMQIHCCVIKM 214
+ NG +AL + M + ++ I F L+ KT +L G Q+H V+
Sbjct: 159 GFLRNGKGKEALGVFAAM--YRERVEISEFT--LSSVVKTCASLKILQQGKQVHAMVVVT 214
Query: 215 GFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC-CNSLMTSLLHCGIVDDVFE 273
G D V + +A+I Y G I A+ Y SL + + E NSL++ C + E
Sbjct: 215 GRD--LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISG---CIRNRNYKE 269
Query: 274 MFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDA 333
F LM + + ++ S HC A++ G+ SD + L+D
Sbjct: 270 AFLLMSRQRPNVRVLSSS----LAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDM 325
Query: 334 YLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK--GLKPDRV 391
Y + G ++ ++ +F IP +V +TS+I+ +A NG G + LE+ M + G+ P+ V
Sbjct: 326 YGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSV 385
Query: 392 TFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQ 451
TFL V++ C+H+GLV+EG+ F M+ + + P +H+ C + +
Sbjct: 386 TFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVER 445
Query: 452 TPGRGD----CVMWSSLLRSCRVHRNETVGRRAAKILL-GLDPEDFAVHLQVSNFYSETG 506
+ C +W ++L +C ++ + T G A+ L+ PE+ ++++ VSNFY+ G
Sbjct: 446 MMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMG 505
Query: 507 EFEASMQIKEIAIARKMTKEIGHSL 531
+++ +++ + + K GHSL
Sbjct: 506 KWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 150/290 (51%), Gaps = 11/290 (3%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH IK G ++L+ +Y + G + ++++F+ + E++L +WN +L GF G
Sbjct: 106 VHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGK 165
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E LG++ + + VE++ + +++ C++ + +G Q+H V+ G + +
Sbjct: 166 GKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGT 223
Query: 124 ALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
A++ FYS+ G ++EA K + ++ + D + NS++S N + +A L+ ++
Sbjct: 224 AMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMS-----RQR 278
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P++R L S + G QIHC ++ GF + S + + L+DMYGKCG I A +
Sbjct: 279 PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDS-KLCNGLMDMYGKCGQIVQART 337
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGL--DEVTF 290
+ ++P S+ S++ + G E+F M +EG G+ + VTF
Sbjct: 338 IFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTF 387
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 136 SEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLS 195
+ A F +P D+ S NS LS + +G D L L + S +F L
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC 94
Query: 196 SKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC 255
S G Q+H +IK G + G++ ++ALIDMY K G + ++V +ES+ L
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTIS-KTALIDMYSKYGHLVDSVRVFESVEEKDLVSW 153
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFST 292
N+L++ L G + +F M E + + E T S+
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSS 190
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 229/518 (44%), Gaps = 60/518 (11%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
N+ ++LV Y+ G +D+A LF ++PE+N +W ++L GF + G D+ LY I
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP 168
Query: 76 -LDNVELNGL--SFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSAC 132
DN+ + C R + FDE S+ ++ +V Y
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSE------------RSVITWTTMVTGYGQN 216
Query: 133 GCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFL 192
+ +A+K F +P + +SW SML Y NG DA EL +M KP I
Sbjct: 217 NRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV---KPVI------- 266
Query: 193 NLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSL 252
C +A+I G+ G+I A ++S+ +
Sbjct: 267 ----------------AC--------------NAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 253 ECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX-XXXXXXXXXXXX 311
+++ G + ++F LM +G+ TF T
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGV---RPTFPTLISILSVCASLASLHHGKQV 353
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLG 371
H ++ ++ DV V+ L+ Y++ G ++ S+ +F++ P ++ + SII+G+A +GLG
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413
Query: 372 KQCLEML-EAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFS 430
++ L++ E + KP+ VTF+ L+ CS++G+VEEG ++ SMES+ G+ P H++
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 431 CMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPE 490
CMV D +W SLL +CR H V AK L+ ++PE
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPE 533
Query: 491 DFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIG 528
+ ++ +SN Y+ G + +++++ R + K G
Sbjct: 534 NSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPG 571
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH + ++ F ++Y+ S L+ +Y++ G + + +FD P +++ WN ++ G+
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 62 GLFDELLGLYNEIKLD-NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
GL +E L ++ E+ L + + N ++F + CS +EG +++ + V V
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSML 157
+VD G +EA + ++ +E D W S+L
Sbjct: 471 HYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/576 (23%), Positives = 253/576 (43%), Gaps = 71/576 (12%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H R + + ++ S L+ Y R AL +FDE+ RN ++N +L + +
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 64 FDELLGLY-----------NEIKLDNVELNGLSFCYL--IRGCSNKRFFDEGSQLHGHVI 110
+ + L+ + + D++ ++ C L + GC + Q+HG VI
Sbjct: 104 YFDAFSLFLSWIGSSCYSSDAARPDSISIS----CVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 111 KVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDAL 170
+ G+ D+++FV N ++ +Y+ C + A+K F + DV+SWNSM+S Y+ +G F D
Sbjct: 160 RGGF-DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK 218
Query: 171 ELLYIMQFWGK-KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQ----- 224
++ M KP+ + + ++ + +FG+++H +I+ H+Q
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN-------HIQMDLSL 271
Query: 225 -SALIDMYGKCGD-------------------------------IKNAVSTYESLPMTSL 252
+A+I Y KCG +K A++ + + L
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Query: 253 ECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXH 312
N++++ L+ ++V F M+ G + VT S+ H
Sbjct: 332 STWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEI--H 389
Query: 313 CCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGK 372
AI+ G ++++ V+ S+ID Y + G +L +Q+VF+ ++ +T+II +A +G
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSD 449
Query: 373 QCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCM 432
+ + M G KPD VT VL+ +HSG + + +F+SM + + I P +H++CM
Sbjct: 450 SACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509
Query: 433 VXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDF 492
V + P +W +LL V + + R A L ++PE+
Sbjct: 510 VSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENT 569
Query: 493 AVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIG 528
+ ++N Y++ G +E E + R K IG
Sbjct: 570 GNYTIMANLYTQAGRWE------EAEMVRNKMKRIG 599
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 207/433 (47%), Gaps = 8/433 (1%)
Query: 104 QLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADN 163
Q+H H+I G+ + + L+ + ++ F ++P+ D +NS++ +
Sbjct: 27 QVHAHLIVTGYGRSRSLLTK-LITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 164 GLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHV 223
L L + M PS +F + + G +HC + GF +V
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGF-GLDTYV 144
Query: 224 QSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGI 283
Q+AL+ Y KCGD++ A ++ +P S+ NSL++ G+ D+ ++F M + G
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF 204
Query: 284 GLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLS 343
D TF + H I G + +V + +LI+ Y R G V +
Sbjct: 205 EPDSATFVSLLSACAQTGAVSLGSWV--HQYIISEGLDLNVKLGTALINLYSRCGDVGKA 262
Query: 344 QKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK-GLKPDRVTFLCVLTGCSH 402
++VF+++ NV +T++I+ + +G G+Q +E+ M G P+ VTF+ VL+ C+H
Sbjct: 263 REVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAH 322
Query: 403 SGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCV--- 459
+GLVEEGR V+ M + + P +H CMV Q G
Sbjct: 323 AGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPA 382
Query: 460 MWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAI 519
+W+++L +C++HRN +G AK L+ L+P++ H+ +SN Y+ +G+ + I++ +
Sbjct: 383 LWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMM 442
Query: 520 ARKMTKEIGHSLI 532
+ K++G+S+I
Sbjct: 443 RNNLRKQVGYSVI 455
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 134/261 (51%), Gaps = 2/261 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VHC A+ GFG + Y+ ++LV Y + G ++ A ++FD +PE+++ WN ++ GF + GL
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
DE + ++ +++ E + +F L+ C+ GS +H ++I G +D N+ +
Sbjct: 189 ADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG-LDLNVKLGT 247
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ-FWGKK 182
AL++ YS CG + +A++ F + +V +W +M+S Y +G A+EL M+ G
Sbjct: 248 ALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPI 307
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+ +FV L+ + G G ++ + K V ++DM G+ G + A
Sbjct: 308 PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYK 367
Query: 243 TYESLPMTSLECCNSLMTSLL 263
L T +L T++L
Sbjct: 368 FIHQLDATGKATAPALWTAML 388
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 147/291 (50%), Gaps = 5/291 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH I G+G + + + L+ L I LF +P + +N V++ +L
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGW-VDTNIF 120
L + Y + NV + +F +I+ C++ G +H H + G+ +DT +
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDT--Y 143
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
V ALV FYS CG + A++ F +P + +++WNS++S + NGL +A+++ Y M+ G
Sbjct: 144 VQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+P +FV L+ ++TG G +H +I G D +V + +ALI++Y +CGD+ A
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL-NVKLGTALINLYSRCGDVGKA 262
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDE-GIGLDEVTF 290
++ + T++ +++++ G E+F M D+ G + VTF
Sbjct: 263 REVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTF 313
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/543 (22%), Positives = 242/543 (44%), Gaps = 28/543 (5%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H + I+ +L+I L+ +LA+++F+++ E N+ N ++R +
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
+ +++E++ + + ++ +L++ CS + + +H H+ K+G + ++I+V
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG-LSSDIYV 154
Query: 122 ANALVDFYSACGCL--SEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
NAL+D YS CG L +A K F+ + D +SWNSML G DA L M
Sbjct: 155 PNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM--- 211
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFD------NGSVHVQSALIDMYGK 233
R + + N + C + F+ + S ++ Y K
Sbjct: 212 ----PQRDLISW--------NTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSK 259
Query: 234 CGDIKNAVSTYESLPMTSLECCN--SLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFS 291
GD++ A ++ +P+ + ++ G++ + + MV G+ D +
Sbjct: 260 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA--A 317
Query: 292 TXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP 351
H + S+ V +L+D Y + G++ + VF IP
Sbjct: 318 VISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP 377
Query: 352 LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRL 411
++ + ++++G +G GK+ +E+ M R+G++PD+VTF+ VL C+H+GL++EG
Sbjct: 378 KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID 437
Query: 412 VFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVH 471
F SME ++ + P +H+ C+V P + V+W +LL +CR+H
Sbjct: 438 YFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMH 497
Query: 472 RNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSL 531
+ + L+ LDP D + +SN Y+ ++E I+ + + K G S
Sbjct: 498 NEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASS 557
Query: 532 IGL 534
+ L
Sbjct: 558 VEL 560
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/543 (26%), Positives = 248/543 (45%), Gaps = 68/543 (12%)
Query: 13 FGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYN 72
+ N+ + + L+ +Y + G I A ++FD +PERN+ +W ++ G+ + G E L++
Sbjct: 92 YSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFS 151
Query: 73 EIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSAC 132
+ L + N + ++ C ++ G Q+HG +K+G + +I+VANA++ Y C
Sbjct: 152 SM-LSHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLG-LHCSIYVANAVISMYGRC 205
Query: 133 ---GCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFV 189
EA F+AI +++++WNSM++ + L A+ + M G V
Sbjct: 206 HDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDG--------V 257
Query: 190 GF-----LNLSS---KTGNALFG------MQIHCCVIKMGFDNGSVHVQSALIDMYGKCG 235
GF LN+ S K+ + + +Q+H +K G + V +ALI +Y +
Sbjct: 258 GFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQT-EVATALIKVYSEM- 315
Query: 236 DIKNAVSTYESLPMTSLECCNSLMTSLLHC-------GIV--------DDVFEMFGLMVD 280
+ C L + HC GI+ + +FG +
Sbjct: 316 -------------LEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAIHLFGQLRQ 362
Query: 281 EGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHV 340
E + D TFS+ H IK G+ +D ++ SLI AY + G +
Sbjct: 363 EKLSPDWYTFSSVLKACAGLVTARHALSI--HAQVIKGGFLADTVLNNSLIHAYAKCGSL 420
Query: 341 LLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGC 400
L +VF+ + +V + S++ ++ +G L + + M + PD TF+ +L+ C
Sbjct: 421 DLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSAC 477
Query: 401 SHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVM 460
SH+G VEEG +F SM P +H++C++ Q P D V+
Sbjct: 478 SHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVV 537
Query: 461 WSSLLRSCRVHRNETVGRRAAKILLGL-DPEDFAVHLQVSNFYSETGEF-EASMQIKEIA 518
W +LL SCR H N +G+ AA L L +P + ++Q+SN Y+ G F EA++ IKE+
Sbjct: 538 WIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEME 597
Query: 519 IAR 521
R
Sbjct: 598 TWR 600
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 145/334 (43%), Gaps = 23/334 (6%)
Query: 85 SFCYLIRGCSNKRFFDEGSQLHGHVIKVGW-VDTNIFVANALVDFYSACGCLSEAKKSFQ 143
++ L + C+ +R +G LH H++ + N+ +AN L++ Y+ CG + A++ F
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 144 AIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF 203
+P +V+SW ++++ Y G + L M F LSS + +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-------SHCFPNEFTLSSVLTSCRY 173
Query: 204 --GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGD---IKNAVSTYESLPMTSLECCNSL 258
G Q+H +K+G + S++V +A+I MYG+C D A + +E++ +L NS+
Sbjct: 174 EPGKQVHGLALKLGL-HCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSM 232
Query: 259 MTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF----STXXXXXXXXXXXXXXXXXXXHCC 314
+ + C + +F M +G+G D T S+ H
Sbjct: 233 IAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSL 292
Query: 315 AIKLGYESDVSVSCSLIDAY--LRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGK 372
+K G + V+ +LI Y + + + E ++ + II FA +
Sbjct: 293 TVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PE 351
Query: 373 QCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLV 406
+ + + + ++ L PD TF VL C +GLV
Sbjct: 352 RAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLV 383
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 179/442 (40%), Gaps = 78/442 (17%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRL---GLIDLALKLFDELPERNLATWNLVLRGF 58
VH A+KLG ++Y+ ++++ +Y R A +F+ + +NL TWN ++ F
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 59 --CELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGC-----SNKRFFDEGS----QLHG 107
C LG + +G++ + D V G L+ C S+ +E S QLH
Sbjct: 237 QCCNLG--KKAIGVFMRMHSDGV---GFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHS 291
Query: 108 HVIKVGWVDTNIFVANALVDFYSA-CGCLSEAKKSFQAIPM-EDVLSWNSMLSVYADNGL 165
+K G V T VA AL+ YS ++ K F + D+++WN +++ +A
Sbjct: 292 LTVKSGLV-TQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA---- 346
Query: 166 FLDALELLYIM-QFWGKK--PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVH 222
D +++ Q +K P +F L + A + IH VIK GF +V
Sbjct: 347 VYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV- 405
Query: 223 VQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG 282
+ ++LI Y KCG + + ++ + + NS++ + G VD + +F M
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---D 462
Query: 283 IGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLL 342
I D TF +L+ A +G V
Sbjct: 463 INPDSATF-------------------------------------IALLSACSHAGRVEE 485
Query: 343 SQKVFEQI-----PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVL 397
++F + LP + + +I+ + ++ E E + + + PD V ++ +L
Sbjct: 486 GLRIFRSMFEKPETLPQLNHYACVIDMLS---RAERFAEAEEVIKQMPMDPDAVVWIALL 542
Query: 398 TGCSHSGLVEEGRLVFNSMESL 419
C G G+L + ++ L
Sbjct: 543 GSCRKHGNTRLGKLAADKLKEL 564
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 232/496 (46%), Gaps = 4/496 (0%)
Query: 39 LFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRF 98
LF N+ +N ++ GF LF E L L+ I+ + L+G +F +++ C+
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 99 FDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLS 158
G LH V+K G+ + ++ +L+ YS G L++A K F IP V++W ++ S
Sbjct: 127 RKLGIDLHSLVVKCGF-NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 159 VYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDN 218
Y +G +A++L M G KP V L+ G+ G I + +M
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 219 GSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLM 278
S V++ L+++Y KCG ++ A S ++S+ + ++++ + E+F M
Sbjct: 246 NSF-VRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM 304
Query: 279 VDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSG 338
+ E + D+ FS + + +++ ++ +LID Y + G
Sbjct: 305 LQENLKPDQ--FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 339 HVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLT 398
+ +VF+++ ++ + I+G A NG K + + G+ PD TFL +L
Sbjct: 363 AMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLC 422
Query: 399 GCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDC 458
GC H+GL+++G FN++ ++ + +H+ CMV P R +
Sbjct: 423 GCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNA 482
Query: 459 VMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIA 518
++W +LL CR+ ++ + K L+ L+P + ++Q+SN YS G ++ + +++++
Sbjct: 483 IVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM 542
Query: 519 IARKMTKEIGHSLIGL 534
+ M K G+S I L
Sbjct: 543 NKKGMKKIPGYSWIEL 558
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 139/287 (48%), Gaps = 2/287 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +K GF ++ +SL+ +Y G ++ A KLFDE+P+R++ TW + G+ G
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E + L+ ++ V+ + ++ C + D G + ++ ++ + N FV
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME-MQKNSFVRT 251
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
LV+ Y+ CG + +A+ F ++ +D+++W++M+ YA N + +EL M KP
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKP 311
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
S VGFL+ + G G + + F ++ + +ALIDMY KCG +
Sbjct: 312 DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT-NLFMANALIDMYAKCGAMARGFEV 370
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
++ + + N+ ++ L G V F +FG GI D TF
Sbjct: 371 FKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTF 417
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 239/534 (44%), Gaps = 48/534 (8%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H K GF N + +SL+ Y ++ A K+FDE+P+ ++ +WN ++ G+ + G
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
F E + L+ E+ +V N SF + C+ G+ +H ++K+G N+ V N
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
L+D Y CG + +A FQ + +D +SWN++++ + NG LEL + F+ + P
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNG----KLELG--LWFFHQMP 250
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
N + LID + K GD NA
Sbjct: 251 ----------------------------------NPDTVTYNELIDAFVKSGDFNNAFQV 276
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+P + N+++T ++ + E F M G+ DE +S
Sbjct: 277 LSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDE--YSLSIVLAAVAALA 334
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
H CA KLG +S V V+ +LID Y + G + ++ +F +P N+ + +I+
Sbjct: 335 VVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMIS 394
Query: 364 GFAWNGLGKQCLEMLEAMIR-KGLKPDRVTFLCVLTGCSHSGLVEEGRL-VFNSMESLHG 421
G+A NG + +++ + + + LKPDR TFL +L CSH + E L F M + +
Sbjct: 395 GYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYR 454
Query: 422 ISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRG-DCVMWSSLLRSCRVHRNETVGRR- 479
I P +H C + Q G G D V W +LL +C ++ +
Sbjct: 455 IKPSVEH-CCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTV 513
Query: 480 AAKIL-LGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
AAK++ LG +D +++ +SN Y+ + QI++I + KE+G S I
Sbjct: 514 AAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 147/344 (42%), Gaps = 43/344 (12%)
Query: 50 TWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHV 109
+W+ ++ G L I D + + +L+R N + QLHG+V
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELIN-DGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 110 IKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDA 169
K G+V +N ++N+L+ FY L +A K F +P DV+SWNS++S Y +G F +
Sbjct: 82 TKHGFV-SNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 170 LELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALID 229
+ L + P+ SF L ++ + G IH ++K+G + G+V V + LID
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 230 MYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVT 289
MYGKCG + +AV ++ + N+++ S G ++ F M + D VT
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP----DTVT 256
Query: 290 FSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQ 349
++ LIDA+++SG + +V
Sbjct: 257 YN-------------------------------------ELIDAFVKSGDFNNAFQVLSD 279
Query: 350 IPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTF 393
+P PN + +I+ G+ + + E M G++ D +
Sbjct: 280 MPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSL 323
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 240/513 (46%), Gaps = 13/513 (2%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
+ ++ Y R + AL LFDE+P R++ +WN ++ G E G + + L++E+ E
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP----E 125
Query: 81 LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKK 140
+ +S+ ++ GC D+ +L ++ DT + N++V Y G + +A K
Sbjct: 126 RSVVSWTAMVNGCFRSGKVDQAERL---FYQMPVKDTAAW--NSMVHGYLQFGKVDDALK 180
Query: 141 SFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGN 200
F+ +P ++V+SW +M+ N +AL+L M K + R F + +
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 201 ALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMT 260
G+Q+H +IK+GF +V ++LI Y C I ++ ++ + +L++
Sbjct: 241 FHMGIQVHGLIIKLGFLYEE-YVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLS 299
Query: 261 SLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGY 320
+D +F M+ I ++ TF++ H A+KLG
Sbjct: 300 GYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM--HGVAVKLGL 357
Query: 321 ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEA 380
E+D V SL+ Y SG+V + VF +I ++ + SII G A +G GK +
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQ 417
Query: 381 MIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES-LHGISPDRDHFSCMVXXXXXX 439
MIR +PD +TF +L+ CSH G +E+GR +F M S ++ I H++CMV
Sbjct: 418 MIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRC 477
Query: 440 XXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVS 499
+ + + ++W +LL +CR+H + G +AA + LD + A ++ +S
Sbjct: 478 GKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLS 537
Query: 500 NFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
N Y+ G + +++ + K+ G S +
Sbjct: 538 NIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 4/253 (1%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
VH IKLGF + Y+ +SL+ Y I + K+FDE +A W +L G+
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
++ L +++ + +++ N +F + CS D G ++HG +K+G ++T+ FV
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLG-LETDAFVG 364
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
N+LV YS G +++A F I + ++SWNS++ A +G A + M K+
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQ--SALIDMYGKCGDIKNA 240
P +F G L+ S G G ++ + G ++ +Q + ++D+ G+CG +K A
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEA 483
Query: 241 VSTYESLPMTSLE 253
E + + E
Sbjct: 484 EELIERMVVKPNE 496
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 219/496 (44%), Gaps = 51/496 (10%)
Query: 33 IDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRG 92
+DLA+ ++ E N+ +N + +GF L LY + D+V + ++ L++
Sbjct: 76 LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA 135
Query: 93 CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLS 152
S F G L H+ K G+ ++ + L+DFYSA G + EA+K F +P D ++
Sbjct: 136 SSFASRF--GESLQAHIWKFGF-GFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIA 192
Query: 153 WNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVI 212
W +M+S Y L + N+L
Sbjct: 193 WTTMVSAYRRV------------------------------LDMDSANSLAN-------- 214
Query: 213 KMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVF 272
+M N + + LI+ Y G+++ A S + +P+ + +++ +
Sbjct: 215 QMSEKNEAT--SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAI 272
Query: 273 EMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLID 332
+F M++EGI DEVT ST H ++ G+ DV + +L+D
Sbjct: 273 AVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEV--HMYTLQNGFVLDVYIGSALVD 330
Query: 333 AYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVT 392
Y + G + + VF +P N+FC+ SII G A +G ++ L+M M + +KP+ VT
Sbjct: 331 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 390
Query: 393 FLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQT 452
F+ V T C+H+GLV+EGR ++ SM + I + +H+ MV
Sbjct: 391 FVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM 450
Query: 453 PGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASM 512
+ V+W +LL CR+H+N + A L+ L+P + + + + Y+E +
Sbjct: 451 EFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRW---- 506
Query: 513 QIKEIAIARKMTKEIG 528
+++A R +E+G
Sbjct: 507 --RDVAEIRGRMRELG 520
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 41/288 (14%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
S+ K GFGF++ I ++L+ Y G I A K+FDE+PER+ W ++ + +
Sbjct: 145 SLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVL 204
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
D L N++ + N +
Sbjct: 205 DMDSANSLANQMS----------------------------------------EKNEATS 224
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
N L++ Y G L +A+ F +P++D++SW +M+ Y+ N + +A+ + Y M G
Sbjct: 225 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 284
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P + ++ + G G ++H ++ GF V++ SAL+DMY KCG ++ A+
Sbjct: 285 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGF-VLDVYIGSALVDMYSKCGSLERALL 343
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ +LP +L C NS++ L G + +MF M E + + VTF
Sbjct: 344 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF 391
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 115/219 (52%), Gaps = 1/219 (0%)
Query: 23 LVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELN 82
L+ YM LG ++ A LF+++P +++ +W +++G+ + + E + ++ ++ + + +
Sbjct: 227 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 286
Query: 83 GLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSF 142
++ +I C++ + G ++H + ++ G+V ++++ +ALVD YS CG L A F
Sbjct: 287 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV-LDVYIGSALVDMYSKCGSLERALLVF 345
Query: 143 QAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNAL 202
+P +++ WNS++ A +G +AL++ M+ KP+ +FV + G
Sbjct: 346 FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVD 405
Query: 203 FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
G +I+ +I +V ++ ++ K G I A+
Sbjct: 406 EGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEAL 444
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH ++ GF ++YIGS+LV +Y + G ++ AL +F LP++NL WN ++ G G
Sbjct: 309 VHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGF 368
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E L ++ ++++++V+ N ++F + C++ DEG +++ +I + +N+
Sbjct: 369 AQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYG 428
Query: 124 ALVDFYSACGCLSEA 138
+V +S G + EA
Sbjct: 429 GMVHLFSKAGLIYEA 443
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 204/411 (49%), Gaps = 8/411 (1%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
S+H + + GF + YI SSLV LY + GL+ A K+F+E+ ER++ W ++ + G
Sbjct: 67 SIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAG 126
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+ E L NE++ ++ ++ ++ G + LH + G+ D +I V
Sbjct: 127 IVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLE---ITQLQCLHDFAVIYGF-DCDIAVM 182
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
N++++ Y C + +AK F + D++SWN+M+S YA G + L+LLY M+ G +
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P ++F L++S + G +HC ++K GFD +H+++ALI MY KCG + +
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV-DMHLKTALITMYLKCGKEEASYR 301
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
E++P + C +++ L+ G + +F M+ G L ++
Sbjct: 302 VLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIAS--VVASCAQL 359
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H ++ GY D SLI Y + GH+ S +FE++ ++ + +II
Sbjct: 360 GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAII 419
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKP-DRVTFLCVLTGCSHSGLVEEGRLV 412
+G+A N + L + E M K ++ D T + +L CS +G + G+L+
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLI 470
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 231/510 (45%), Gaps = 11/510 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H A+ GF ++ + +S++ LY + + A LFD++ +R++ +WN ++ G+ +G
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E+L L ++ D + + +F + + G LH ++K G+ D ++ +
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF-DVDMHLKT 284
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
AL+ Y CG + + + IP +DV+ W M+S G AL + M G
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
S + + ++ G+ G +H V++ G+ + + S LI MY KCG + ++
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNS-LITMYAKCGHLDKSLVI 403
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEV----TFSTXXXXXXX 299
+E + L N++++ G +V L++ E + V +F+
Sbjct: 404 FERMNERDLVSWNAIIS-----GYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQAC 458
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFT 359
HC I+ V +L+D Y + G++ +Q+ F+ I +V +
Sbjct: 459 SSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWG 518
Query: 360 SIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESL 419
+I G+ ++G G LE+ + G++P+ V FL VL+ CSH+G+V++G +F+SM
Sbjct: 519 ILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRD 578
Query: 420 HGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRR 479
G+ P+ +H +C+V + R + +L +CR + V
Sbjct: 579 FGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDI 638
Query: 480 AAKILLGLDPEDFAVHLQVSNFYSETGEFE 509
+ ++ L P D ++++ + ++ ++
Sbjct: 639 ICEDMIELKPGDAGHYVKLGHSFAAMKRWD 668
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 6/230 (2%)
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P +F L + FG+ IH V+ GF + ++ S+L+++Y K G + +A
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF-SSDFYISSSLVNLYAKFGLLAHARK 102
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
+E + + +++ GIV + + M +GI VT
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL-----LEMLSGV 157
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H A+ G++ D++V S+++ Y + HV ++ +F+Q+ ++ + ++I
Sbjct: 158 LEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMI 217
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
+G+A G + L++L M GL+PD+ TF L+ +E GR++
Sbjct: 218 SGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRML 267
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/568 (24%), Positives = 254/568 (44%), Gaps = 43/568 (7%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLG--LIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H +K GF ++++ +SL+ LY + D LKLFDE+P+R++A+WN V+ +
Sbjct: 203 IHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKE 262
Query: 62 GLFDELLGLYNEI-KLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
G + L+ E+ +++ ++ + L+ C++ G +LHG I++G + +
Sbjct: 263 GKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ-ELS 321
Query: 121 VANALVDFYS-------------------------------ACGCLSEAKKSFQAIPMED 149
V NAL+ FYS + G + A + F + ++
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 150 VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHC 209
+++N++++ + NG L AL+L M G + + S ++ QIH
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHG 441
Query: 210 CVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP--MTSLECCNSLMTSLLHCGI 267
IK G +Q+AL+DM +C + +A ++ P + S + S++ G+
Sbjct: 442 FCIKFGTAFNPC-IQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGL 500
Query: 268 VDDVFEMFG-LMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSV 326
D +F + ++ + LDEV+ + HC A+K GY SD+S+
Sbjct: 501 PDKAVSLFHRTLCEQKLFLDEVSLT--LILAVCGTLGFREMGYQIHCYALKAGYFSDISL 558
Query: 327 SCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGL 386
SLI Y + + K+F + +V + S+I+ + G + L + M K +
Sbjct: 559 GNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEI 618
Query: 387 KPDRVTFLCVLTG--CSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXX 444
KPD +T V++ + S + R +F SM++++ I P +H++ V
Sbjct: 619 KPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEE 678
Query: 445 XXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSE 504
P + + + +LL SCR+H N +V +R AK++L PE + ++ SN YS
Sbjct: 679 AEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSA 738
Query: 505 TGEFEASMQIKEIAIARKMTKEIGHSLI 532
+G + S I+E R K S I
Sbjct: 739 SGFWHRSEMIREEMRERGYRKHPAKSWI 766
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 185/429 (43%), Gaps = 42/429 (9%)
Query: 19 IGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEI-KLD 77
+G++L+ Y++LG A+ +F L + ++ ++ GF L L E L ++ + K
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 78 NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFY---SACGC 134
V+ N +F ++ C F G Q+HG ++K G++++ +FV+N+L+ Y S C
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNS-VFVSNSLMSLYDKDSGSSC 234
Query: 135 LSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL 194
+ K F IP DV SWN+++S G A +L Y M + + SF L
Sbjct: 235 -DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMN-RVEGFGVDSFTLSTLL 292
Query: 195 SSKTGNA--LFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSL 252
SS T ++ L G ++H I++G + V +ALI Y K D+K S YE +
Sbjct: 293 SSCTDSSVLLRGRELHGRAIRIGLMQ-ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDA 351
Query: 253 ECCNSLMTSLLHCGIVDDVFEMFGLMVDEGI----------------------------- 283
++T+ + G+VD E+F + ++
Sbjct: 352 VTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR 411
Query: 284 GLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLS 343
G++ FS H IK G + + +L+D R + +
Sbjct: 412 GVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADA 471
Query: 344 QKVFEQIP--LPNVFCFTSIINGFAWNGLGKQCLEML-EAMIRKGLKPDRVTFLCVLTGC 400
+++F+Q P L + TSII G+A NGL + + + + + L D V+ +L C
Sbjct: 472 EEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
Query: 401 SHSGLVEEG 409
G E G
Sbjct: 532 GTLGFREMG 540
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 213/446 (47%), Gaps = 5/446 (1%)
Query: 87 CYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIP 146
C L+ + R +G QLHG+V+K G + VAN L++FYS +++++F+ P
Sbjct: 19 CDLLLSSARTRSTIKGLQLHGYVVKSG-LSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 147 MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQ 206
+ +W+S++S +A N L +LE L M +P + G
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 207 IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCG 266
+HC +K G+D V V S+L+DMY KCG+I A ++ +P ++ + +M G
Sbjct: 138 VHCLSMKTGYD-ADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG 196
Query: 267 IVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSV 326
++ +F + E + +++ +FS+ H +IK ++S V
Sbjct: 197 ENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQI--HGLSIKSSFDSSSFV 254
Query: 327 SCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGL 386
SL+ Y + G + +VF ++P+ N+ + +++ +A + ++ +E+ + M G+
Sbjct: 255 GSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGM 314
Query: 387 KPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXX 446
KP+ +TFL VL CSH+GLV+EGR F+ M+ I P H++ +V
Sbjct: 315 KPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEAL 373
Query: 447 XXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETG 506
P +W +LL SC VH+N + AA + L P +H+ +SN Y+ G
Sbjct: 374 EVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADG 433
Query: 507 EFEASMQIKEIAIARKMTKEIGHSLI 532
FE + + +++ R KE G S +
Sbjct: 434 RFEDAAKARKLLRDRGEKKETGLSWV 459
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 146/280 (52%), Gaps = 10/280 (3%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
SVHC ++K G+ ++++GSSLV +Y + G I A K+FDE+P+RN+ TW+ ++ G+ ++G
Sbjct: 137 SVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG 196
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+E L L+ E +N+ +N SF +I C+N + G Q+HG + D++ FV
Sbjct: 197 ENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSSFVG 255
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
++LV YS CG A + F +P++++ WN+ML YA + +EL M+ G K
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 315
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+ +F+ LN S G G + + + H S L+DM G+ G ++ A+
Sbjct: 316 PNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYAS-LVDMLGRAGRLQEALE 374
Query: 243 TYESLPMTSLE--------CCNSLMTSLLHCGIVDDVFEM 274
++P+ E C + L D VFE+
Sbjct: 375 VITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFEL 414
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 133/288 (46%), Gaps = 2/288 (0%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+H +K G + ++L+ Y + L + + F++ P+++ TW+ ++ F +
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNE 95
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
L L ++ N+ + + C+ D G +H +K G+ D ++FV
Sbjct: 96 LPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGY-DADVFVG 154
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
++LVD Y+ CG + A+K F +P +V++W+ M+ YA G +AL L F
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
+ SF +++ + + G QIH + + S V S+L+ +Y KCG + A
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIH-GLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ +P+ +L N+++ + V E+F M G+ + +TF
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITF 321
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 197/395 (49%), Gaps = 29/395 (7%)
Query: 135 LSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL 194
LS K ++ +E+V+ +S SV D G DA +G ++RS LN
Sbjct: 88 LSRTKNGVSSV-LEEVMLEDSSSSVKRD-GWSFDA---------YGLSSAVRSCG--LNR 134
Query: 195 SSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC 254
+TG+ HC +K GF + V++ S+L+ +Y G+++NA +E +P ++
Sbjct: 135 DFRTGSGF-----HCLALKGGFIS-DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVS 188
Query: 255 CNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCC 314
++++ VD +++ M ++ TF+ HC
Sbjct: 189 WTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSV--HCQ 246
Query: 315 AIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQC 374
+ +G +S + +S SLI Y + G + + ++F+Q +V + S+I G+A +GL Q
Sbjct: 247 TLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQA 306
Query: 375 LEMLEAMIRK-GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
+E+ E M+ K G KPD +T+L VL+ C H+GLV+EGR FN M HG+ P+ +H+SC+V
Sbjct: 307 IELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLV 365
Query: 434 XXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFA 493
P + + V+W SLL SCRVH + G RAA+ L L+P+ A
Sbjct: 366 DLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAA 425
Query: 494 VHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIG 528
H+Q++N Y+ G + KE A RK+ K+ G
Sbjct: 426 THVQLANLYASVGYW------KEAATVRKLMKDKG 454
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLF 64
HC A+K GF ++Y+GSSLV LY G ++ A K+F+E+PERN+ +W ++ GF +
Sbjct: 143 HCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRV 202
Query: 65 DELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANA 124
D L LY++++ + N +F L+ C+ +G +H + +G + + + ++N+
Sbjct: 203 DICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMG-LKSYLHISNS 261
Query: 125 LVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL-YIMQFWGKKP 183
L+ Y CG L +A + F +DV+SWNSM++ YA +GL + A+EL +M G KP
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+++G L+ G G + + + G H S L+D+ G+ G ++ A+
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHY-SCLVDLLGRFGLLQEALEL 380
Query: 244 YESLPMTSLECCNSLM--TSLLHCGIVDDVF 272
E++PM NS++ + L C + DV+
Sbjct: 381 IENMPMKP----NSVIWGSLLFSCRVHGDVW 407
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
SVHC+ + +G L+I +SL+ +Y + G + A ++FD+ +++ +WN ++ G+ + G
Sbjct: 242 SVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHG 301
Query: 63 LFDELLGLYN-EIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
L + + L+ + + + +++ ++ C + EG + + + G + +
Sbjct: 302 LAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHG-LKPELNH 360
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSML---SVYADNGLFLDALELLYIMQ 177
+ LVD G L EA + + +PM+ + + W S+L V+ D + A E +++
Sbjct: 361 YSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLE 420
Query: 178 ------------------FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNG 219
+W + ++R + L + G + ++I+ V ++G
Sbjct: 421 PDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSW--IEINNYVFMFKAEDG 478
Query: 220 S-------VHVQSALID 229
S VHV LID
Sbjct: 479 SNCRMLEIVHVLHCLID 495
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 210/470 (44%), Gaps = 50/470 (10%)
Query: 104 QLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADN 163
Q H ++I G N+ VA ++ S G L A F P + N+M+ +
Sbjct: 33 QSHCYMIITGLNRDNLNVAK-FIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALS-- 89
Query: 164 GLFLD-----ALELLYIMQFWG--KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGF 216
LD ++ + + W KP +F L ++ + + FG QIH V+ GF
Sbjct: 90 --LLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 217 DNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMT---------------S 261
D+ SVHV + LI MY CG + +A ++ + + + N+L+
Sbjct: 148 DS-SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLE 206
Query: 262 LLHCGIVDDV------------------FEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
++ C + ++V E+F M+ E + DEVT
Sbjct: 207 MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL 266
Query: 304 XXXXXXXXHCCAI-KLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
C + G VS++ ++ID Y +SG++ + VFE + NV +T+II
Sbjct: 267 ELGERI---CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTII 323
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
G A +G G + L M M++ G++P+ VTF+ +L+ CSH G V+ G+ +FNSM S +GI
Sbjct: 324 AGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGI 383
Query: 423 SPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAK 482
P+ +H+ CM+ P + + +W SLL + VH + +G RA
Sbjct: 384 HPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALS 443
Query: 483 ILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
L+ L+P + ++ ++N YS G ++ S ++ + + K G S I
Sbjct: 444 ELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSI 493
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 122/238 (51%), Gaps = 3/238 (1%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELP--ERNLATWNLVLRGFCELGLFDELLGLYNE 73
++ + ++L+ Y ++G +D A L + +P RN +W V+ G+ + G E + ++
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 74 IKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACG 133
+ ++NVE + ++ ++ C++ + G ++ +V G ++ + + NA++D Y+ G
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRG-MNRAVSLNNAVIDMYAKSG 299
Query: 134 CLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLN 193
+++A F+ + +V++W ++++ A +G +AL + M G +P+ +F+ L+
Sbjct: 300 NITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILS 359
Query: 194 LSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
S G G ++ + + ++ +ID+ G+ G ++ A +S+P +
Sbjct: 360 ACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKA 417
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLY 71
G + + ++++ +Y + G I AL +F+ + ERN+ TW ++ G G E L ++
Sbjct: 280 GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMF 339
Query: 72 NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSA 131
N + V N ++F ++ CS+ + D G +L + + NI ++D
Sbjct: 340 NRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGR 399
Query: 132 CGCLSEAKKSFQAIPME-DVLSWNSMLS 158
G L EA + +++P + + W S+L+
Sbjct: 400 AGKLREADEVIKSMPFKANAAIWGSLLA 427
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/516 (24%), Positives = 228/516 (44%), Gaps = 37/516 (7%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+HC +K G+ N+ + +S+V +Y + ++ A ++FDE+ + +WN+++R + E+
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G DE + ++ ++ NV + ++ CS + G +H +K+ V + V
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLS-VVADTVV 300
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM----- 176
+ ++ D Y C L A++ F +D+ SW S +S YA +GL +A EL +M
Sbjct: 301 STSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI 360
Query: 177 -------------QFWGK--------KPSIR-----SFVGFLNLSSKTGNALFGMQIHCC 210
W + + I + V LN+ S + G Q H
Sbjct: 361 VSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGF 420
Query: 211 VIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC-NSLMTSLLHCGIVD 269
+ + G+D +V V +AL+DMYGKCG +++A + + E N+L+T + G +
Sbjct: 421 IYRHGYDT-NVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSE 479
Query: 270 DVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCS 329
F M E ++ H I+ GY+ DV + +
Sbjct: 480 QALSFFEGMQVEA---KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGA 536
Query: 330 LIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPD 389
++D Y + + +VF++ ++ + SII G NG K+ E+ + +G+KPD
Sbjct: 537 MVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPD 596
Query: 390 RVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXX 449
VTFL +L C G VE G F+SM + + ISP +H+ CM+
Sbjct: 597 HVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFL 656
Query: 450 XQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILL 485
P M + + +C+ +R +G AAK L+
Sbjct: 657 LLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 157/321 (48%), Gaps = 8/321 (2%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
L R CS+K + ++ H++ + IF+ N ++ Y CGC+ +A++ F+ +P
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPP-IFLLNRAIEAYGKCGCVDDARELFEEMPER 125
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
D SWN++++ A NG+ + + M G + + SF G L + Q+H
Sbjct: 126 DGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLH 185
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
C V+K G+ +G+V ++++++D+YGKC + +A ++ + S N ++ L G
Sbjct: 186 CAVVKYGY-SGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFN 244
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
D+ MF M++ + + + + H A+KL +D VS
Sbjct: 245 DEAVVMFFKMLE--LNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVST 302
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
S+ D Y++ + +++VF+Q ++ +TS ++G+A +GL ++ E+ + M + +
Sbjct: 303 SVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI-- 360
Query: 389 DRVTFLCVLTGCSHSGLVEEG 409
V++ +L G H+ +E
Sbjct: 361 --VSWNAMLGGYVHAHEWDEA 379
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 202/482 (41%), Gaps = 35/482 (7%)
Query: 17 LYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKL 76
+++ + + Y + G +D A +LF+E+PER+ +WN V+ + G+ DE+ ++ +
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 77 DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLS 136
D V SF +++ C QLH V+K G+ N+ + ++VD Y C +S
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGY-SGNVDLETSIVDVYGKCRVMS 214
Query: 137 EAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS 196
+A++ F I +SWN ++ Y + G +A+ + + M +P + + S
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS 274
Query: 197 KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCN 256
++ G IH +K+ +V V +++ DMY KC +++A ++ L+
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTV-VSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWT 333
Query: 257 SLMTSLLHCGIVDDVFEMFGLMVDEGI--------------GLDE-VTFSTXXXXXXXXX 301
S M+ G+ + E+F LM + I DE + F T
Sbjct: 334 SAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI 393
Query: 302 XXXXXXXXXXHCCAI--------------KLGYESDVSVSCSLIDAYLRSGHVLLSQKVF 347
C I + GY+++V V+ +L+D Y + G + + F
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 348 EQIP-LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLV 406
Q+ L + + +++ G A G +Q L E M + KP + T +L GC++ +
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPAL 512
Query: 407 EEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLR 466
G+ + + G D MV + R D ++W+S++R
Sbjct: 513 NLGKAIHGFLIR-DGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIR 570
Query: 467 SC 468
C
Sbjct: 571 GC 572
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 220/481 (45%), Gaps = 10/481 (2%)
Query: 52 NLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIK 111
N +++ C+ G + + + ++ + + ++ LI C ++ + ++H H++
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESSPSQQ----TYELLILCCGHRSSLSDALRVHRHILD 105
Query: 112 VGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALE 171
G D + F+A L+ YS G + A+K F + WN++ G + L
Sbjct: 106 NG-SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 172 LLYIMQFWGKKPSIRSFVGFLNL---SSKTGNALF-GMQIHCCVIKMGFDNGSVHVQSAL 227
L + M G + ++ L S T N L G +IH + + G+ + V++ + L
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS-HVYIMTTL 223
Query: 228 IDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDE 287
+DMY + G + A + +P+ ++ ++++ G + F M+ E
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 288 VTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVF 347
+ + H ++ G +S + V +L+ Y R G + + Q+VF
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF 343
Query: 348 EQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVE 407
+++ +V + S+I+ + +G GK+ +++ E M+ G P VTF+ VL CSH GLVE
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 408 EGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRS 467
EG+ +F +M HGI P +H++CMV +W SLL S
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 468 CRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEI 527
CR+H N + RA++ L L+P++ ++ +++ Y+E ++ ++K++ R + K
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 528 G 528
G
Sbjct: 524 G 524
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 146/293 (49%), Gaps = 8/293 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH + G + ++ + L+G+Y LG +D A K+FD+ +R + WN + R G
Sbjct: 99 VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKR----FFDEGSQLHGHVIKVGWVDTNI 119
+E+LGLY ++ VE + ++ Y+++ C +G ++H H+ + G+ +++
Sbjct: 159 GEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY-SSHV 217
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
++ LVD Y+ GC+ A F +P+ +V+SW++M++ YA NG +AL M
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 180 GK--KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
K P+ + V L + G IH +++ G D+ + V SAL+ MYG+CG +
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDS-ILPVISALVTMYGRCGKL 336
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ ++ + + NSL++S G ++F M+ G VTF
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTF 389
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H ++ G L + S+LV +Y R G +++ ++FD + +R++ +WN ++ + G
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGY 366
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ + ++ E+ + ++F ++ CS++ +EG +L + + + I
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYA 426
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLS-WNSML 157
+VD L EA K Q + E W S+L
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 217/483 (44%), Gaps = 42/483 (8%)
Query: 86 FCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAI 145
+ + ++ C+ R LH H++K+G V +AN LV+ Y CG S A + F +
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQC-CPLANTLVNVYGKCGAASHALQVFDEM 64
Query: 146 PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK-KPSIRSFVGFLNLSSKTGNALFG 204
P D ++W S+L+ L L + + +P F + + G+ G
Sbjct: 65 PHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 124
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLH 264
Q+HC I + N V V+S+L+DMY KCG + +A + ++S+ + + ++++
Sbjct: 125 RQVHCHFIVSEYANDEV-VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 265 CGIVDDVFEMFGLM---------------VDEGIGLDEVTFSTXXXXXXXXXXXXXXXXX 309
G ++ E+F ++ V G GL+ + T
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 310 XXHCCA---------------IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPN 354
CA I LG++S V +S +LID Y + V+ ++ +F ++ +
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 355 VFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFN 414
V +TS+I G A +G ++ L + + M+ G+KP+ VTF+ ++ CSH G VE+GR +F
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 415 SMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNE 474
SM +GI P H++C++ P D W++LL +C+
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 475 TVGRRAAKILL-GLDPEDFAVHLQVSNFYSETGEF----EASMQIKEIAIARKMTKEIGH 529
+G R A L+ +D + ++ +SN Y+ + EA ++ E+ + K+ GH
Sbjct: 424 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEV----RKDPGH 479
Query: 530 SLI 532
S +
Sbjct: 480 SSV 482
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 191/441 (43%), Gaps = 70/441 (15%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
++H +KLG + ++LV +Y + G AL++FDE+P R+ W VL +
Sbjct: 23 KALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQA 82
Query: 62 GLFDELLGLYNEIKLDN-VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
L + L +++ + + + + F L++ C+N D G Q+H H I + + +
Sbjct: 83 NLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV- 141
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ--- 177
V ++LVD Y+ CG L+ AK F +I +++ +SW +M+S YA +G +ALEL I+
Sbjct: 142 VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKN 201
Query: 178 ----------FWGKKPSIRSFVGF-------------LNLSSKTGN------ALFGMQIH 208
F + +F F L LSS G ++ G Q+H
Sbjct: 202 LYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVH 261
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
VI +GFD+ V + +ALIDMY KC D+ A + + + SL+ + G
Sbjct: 262 GLVIALGFDS-CVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQA 320
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
+ ++ MV G+ +EVTF + L Y +C
Sbjct: 321 EKALALYDDMVSHGVKPNEVTF-------------------------VGLIY------AC 349
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
S + ++ G L + P++ +T +++ +GL + ++ M P
Sbjct: 350 SHV-GFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM---PFPP 405
Query: 389 DRVTFLCVLTGCSHSGLVEEG 409
D T+ +L+ C G + G
Sbjct: 406 DEPTWAALLSACKRQGRGQMG 426
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 202/437 (46%), Gaps = 13/437 (2%)
Query: 104 QLHGHVIKVGWVDTNIFVANALVDFY----SACGCLSEAKKSFQAIPME-DVLSWNSMLS 158
Q+H I+ G ++ + L+ FY + +S A K F I +V WN+++
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 159 VYADNGLFLDALELLYIMQFWG-KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFD 217
YA+ G + A L M+ G +P ++ + + + G IH VI+ GF
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF- 152
Query: 218 NGS-VHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFG 276
GS ++VQ++L+ +Y CGD+ +A ++ +P L NS++ G ++ ++
Sbjct: 153 -GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211
Query: 277 LMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLR 336
M +GI D F+ H IK+G ++ S L+D Y R
Sbjct: 212 EMNSKGIKPD--GFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 269
Query: 337 SGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAM-IRKGLKPDRVTFLC 395
G V ++ +F+++ N +TS+I G A NG GK+ +E+ + M +GL P +TF+
Sbjct: 270 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 329
Query: 396 VLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGR 455
+L CSH G+V+EG F M + I P +HF CMV P +
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 389
Query: 456 GDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIK 515
+ V+W +LL +C VH + + A +L L+P ++ +SN Y+ + +I+
Sbjct: 390 PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIR 449
Query: 516 EIAIARKMTKEIGHSLI 532
+ + + K GHSL+
Sbjct: 450 KQMLRDGVKKVPGHSLV 466
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 24/260 (9%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
++H I+ GFG +Y+ +SL+ LY G + A K+FD++PE++L WN V+ GF E
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G +E L LY E+ ++ +G + L+ C+ G ++H ++IKVG + N+
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG-LTRNLHS 259
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL-YIMQFWG 180
+N L+D Y+ CG + EAK F + ++ +SW S++ A NG +A+EL Y+ G
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFD-----------NGSVHVQSALID 229
P +FVG L S HC ++K GF+ + ++D
Sbjct: 320 LLPCEITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 230 MYGKCGDIKNAVSTYESLPM 249
+ + G +K A +S+PM
Sbjct: 369 LLARAGQVKKAYEYIKSMPM 388
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 186/392 (47%), Gaps = 45/392 (11%)
Query: 36 ALKLFDELPER-NLATWNLVLRGFCELGLFDELLGLYNEIKLDN-VELNGLSFCYLIRGC 93
A K+F ++ + N+ WN ++RG+ E+G LY E+++ VE + ++ +LI+
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 94 SNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSW 153
+ G +H VI+ G+ + I+V N+L+ Y+ CG ++ A K F +P +D+++W
Sbjct: 132 TTMADVRLGETIHSVVIRSGF-GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 154 NSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIK 213
NS+++ +A+NG +AL L M G KP + V L+ +K G G ++H +IK
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 214 MGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFE 273
+G ++H + L+D+Y +CG ++ A + ++ + + SL+ L G + E
Sbjct: 251 VGLTR-NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 274 MFGLM-VDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLID 332
+F M EG+ E+TF HC +K G+E
Sbjct: 310 LFKYMESTEGLLPCEITF-------------VGILYACSHCGMVKEGFE----------- 345
Query: 333 AYLRSGHVLLSQKVFEQIPL-PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRV 391
Y R ++ E+ + P + F +++ A G K+ E +++M ++P+ V
Sbjct: 346 -YFR--------RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM---PMQPNVV 393
Query: 392 TFLCVLTGCS---HSGLVEEGRLVFNSMESLH 420
+ +L C+ S L E R+ +E H
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNH 425
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 147/579 (25%), Positives = 244/579 (42%), Gaps = 56/579 (9%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYM---RLGLIDLALKLFDEL--------PERNLAT 50
N +H R IK G N + + +V + R L D A +F E +
Sbjct: 22 NQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFL 81
Query: 51 WNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVI 110
WN V++ + L L + + V ++ S +++ CS F G Q+HG +
Sbjct: 82 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 141
Query: 111 KVG-WVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDA 169
K G W D +F+ N L+ Y CGCL +++ F +P D +S+NSM+ Y GL + A
Sbjct: 142 KTGLWSD--LFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSA 199
Query: 170 LELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCV------------------ 211
EL +M +++ + + ++ S G+ I +
Sbjct: 200 RELFDLMPM-----EMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDG 254
Query: 212 -IKMG--------FD---NGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLM 259
+K G FD V + +ID Y K G + +A + ++ +P + NS+M
Sbjct: 255 YVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMM 314
Query: 260 TSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLG 319
+ + E+F M E L + T + H ++
Sbjct: 315 AGYVQNKYHMEALEIFSDMEKESHLLPDDT-TLVIVLPAIAQLGRLSKAIDMHLYIVEKQ 373
Query: 320 YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLE 379
+ + +LID Y + G + + VFE I ++ + ++I G A +GLG+ +ML
Sbjct: 374 FYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLL 433
Query: 380 AMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXX 439
+ R LKPD +TF+ VL CSHSGLV+EG L F M H I P H+ CMV
Sbjct: 434 QIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRS 493
Query: 440 XXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILL---GLDPEDFAVHL 496
+ P + V+W + L +C H+ G AK L+ G +P + +
Sbjct: 494 GSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVL-- 551
Query: 497 QVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
+SN Y+ G ++ +++ + RK+ K G S I L+
Sbjct: 552 -LSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELD 589
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 24/337 (7%)
Query: 100 DEGSQLHGHVIKVGWVD-----TNIFVANA------LVDFYSACGCLSEAKKSFQAIPME 148
D+ +Q+HG +IK G + T I +A A L DF + C SF +E
Sbjct: 19 DDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADF-ARCVFHEYHVCSFSFGEVE 77
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
D WN+++ ++ AL LL +M G S L S+ G GMQIH
Sbjct: 78 DPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIH 137
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
+ K G + + +Q+ LI +Y KCG + + ++ +P NS++ + CG++
Sbjct: 138 GFLKKTGLWS-DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 196
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
E+F LM E L +++++ E D+
Sbjct: 197 VSARELFDLMPMEMKNL--ISWNSMISGYAQTSDGVDIASKLFADMP-----EKDLISWN 249
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
S+ID Y++ G + ++ +F+ +P +V + ++I+G+A G + + M +
Sbjct: 250 SMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR---- 305
Query: 389 DRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPD 425
D V + ++ G + E +F+ ME + PD
Sbjct: 306 DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPD 342
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 142/609 (23%), Positives = 253/609 (41%), Gaps = 99/609 (16%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLA--------------------------- 36
+HCR +K G N YI +S++ +Y + L+ A
Sbjct: 317 IHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRR 376
Query: 37 ----LKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRG 92
LKLFD +PER+ ++ +++G+ + + E + L+ E++ + LN ++ +I
Sbjct: 377 LWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISA 436
Query: 93 CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLS 152
CS+ + L IK+ ++ +FV+ L+ Y C CL +A+K F +P ++++
Sbjct: 437 CSHLGGIWDCRMLQSLAIKLK-LEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVT 495
Query: 153 WNSMLSVYADNGLFLDALEL-----------------------------LYIMQFW--GK 181
WN ML+ Y+ GL A EL +Y + G
Sbjct: 496 WNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGM 555
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFD------------------------ 217
KPS V L+ S+++ + G+Q+H ++K GFD
Sbjct: 556 KPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQ 615
Query: 218 --NGSV--HVQS--ALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDV 271
SV H+ S ALI + K G ++ A ++ + N++++
Sbjct: 616 QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLA 675
Query: 272 FEMFGLMVDEG-IGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSL 330
+F M+ + D +T + + + +++ + +
Sbjct: 676 LHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAA--I 733
Query: 331 IDAYLRSGHVLLSQKVFEQ---IPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLK 387
ID Y + G + + +F Q I + + +II G A +G K L++ + +K
Sbjct: 734 IDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIK 793
Query: 388 PDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXX 447
P+ +TF+ VL+ C H+GLVE G+ F SM+S HGI PD H+ CMV
Sbjct: 794 PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKE 853
Query: 448 XXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGE 507
+ P + D ++W LL + R H N + AA L +DP + +SN Y++ G
Sbjct: 854 MIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGR 913
Query: 508 FEASMQIKE 516
+E ++E
Sbjct: 914 WEDVALVRE 922
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/535 (22%), Positives = 235/535 (43%), Gaps = 45/535 (8%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
++++ Y + I AL LF+++PERN +W+ ++ GFC+ G D + L+ ++ + +
Sbjct: 140 NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSS 199
Query: 81 LNGLSFCYLIRG-CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
C L+ G N+R + L + V + ++ N L+ Y G + A+
Sbjct: 200 ----PLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAAR 255
Query: 140 KSFQAIP---------------MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPS 184
F IP ++V+SWNSM+ Y G + A L M+
Sbjct: 256 CLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK------- 308
Query: 185 IRSFVGFLNLSSKTGNALFGMQIHCCVIKMGF------DNGSVHVQSALIDMYGKCGDIK 238
+ + + N + +H ++ F N H + ++ Y G+++
Sbjct: 309 --------DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVE 360
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
A +E P NS++ + + ++F M EG D T ++
Sbjct: 361 LARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST 420
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPN-VFC 357
H +K DV V +LI Y R G ++ S+++F+++ L V
Sbjct: 421 GLVNLRLGMQM--HQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVIT 477
Query: 358 FTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSME 417
+ ++I G+A++G + L + +M G+ P +TF+ VL C+H+GLV+E + F SM
Sbjct: 478 WNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMM 537
Query: 418 SLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVG 477
S++ I P +H+S +V P D +W +LL +CR++ N +
Sbjct: 538 SVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLA 597
Query: 478 RRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
AA+ + L+PE ++ + N Y++ G ++ + Q++ ++++ KE G S +
Sbjct: 598 HVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 134/293 (45%), Gaps = 33/293 (11%)
Query: 17 LYIGSSLVGLYMRLGLIDLALKLFDELPE---------------RNLATWNLVLRGFCEL 61
+Y ++L+ Y + G ++ A LFD++P+ +N+ +WN +++ + ++
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 62 GLFDELLGLYNEIK-LDNVELNGL--SFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
G L++++K D + N + + ++ R F E H W
Sbjct: 295 GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH----SW---- 346
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
N +V Y++ G + A+ F+ P + +SWNS+++ Y N + +A++L M
Sbjct: 347 ----NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNI 402
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
G+KP + L+ S+ N GMQ+H V+K + VH +ALI MY +CG+I
Sbjct: 403 EGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVH--NALITMYSRCGEIM 460
Query: 239 NAVSTYESLPMT-SLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ ++ + + + N+++ G + +FG M GI +TF
Sbjct: 461 ESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITF 513
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 161/395 (40%), Gaps = 38/395 (9%)
Query: 28 MRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEI-KLDNVELNGLSF 86
+R G I A +F++L RN TWN ++ G+ + ++ L++ + K D V N +
Sbjct: 51 IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMIS 110
Query: 87 CYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIP 146
Y+ C RF +E +L + + F N ++ Y+ + EA F+ +P
Sbjct: 111 GYV--SCGGIRFLEEARKLFDEM-----PSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 147 MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQ 206
+ +SW++M++ + NG A+ L M P + + V L + + A + +
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP-LCALVAGLIKNERLSEAAWVLG 222
Query: 207 IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP---------------MTS 251
+ ++ D V+ + LI YG+ G ++ A ++ +P +
Sbjct: 223 QYGSLVSGRED--LVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKN 280
Query: 252 LECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXX 311
+ NS++ + L G V +F M D D ++++T
Sbjct: 281 VVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLG 371
D ++ Y G+V L++ FE+ P + + SII + N
Sbjct: 337 EMP------NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDY 390
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLV 406
K+ +++ M +G KPD T +L+ +GLV
Sbjct: 391 KEAVDLFIRMNIEGEKPDPHTLTSLLSAS--TGLV 423
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 220/489 (44%), Gaps = 47/489 (9%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDT-NIFVANALVDFYSACGCLSEAKKSFQAIPM 147
L+R C+++ F G +LH + G +++NAL FY++ G + A+K F IP+
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 148 --EDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGM 205
+D + W ++LS ++ GL +++++L M+ + S V + +K + F
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESL------------------ 247
Q H +KMG SV V +AL+DMYGKCG + +E L
Sbjct: 132 QGHGVAVKMGVLT-SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 248 -------------PMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDE-GIGLDEVTFSTX 293
P + ++ L G +V E+ MV G GL+ VT +
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 294 XXXXXXXXXXXXXXXXXXHCCAIK----LGYES---DVSVSCSLIDAYLRSGHVLLSQKV 346
H A+K +G E+ DV V +L+D Y + G++ S V
Sbjct: 251 LSACAQSGNLVVGRWV--HVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 347 FEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLV 406
F + NV + ++ +G A +G G+ ++M MIR+ +KPD +TF VL+ CSHSG+V
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIV 367
Query: 407 EEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLR 466
+EG F+S+ +G+ P DH++CMV + P + V+ SLL
Sbjct: 368 DEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLG 426
Query: 467 SCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKE 526
SC VH + R + L+ + P + + +SN Y G + + ++ R + K
Sbjct: 427 SCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKI 486
Query: 527 IGHSLIGLN 535
G S I +N
Sbjct: 487 PGLSSIYVN 495
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 146/315 (46%), Gaps = 42/315 (13%)
Query: 18 YIGSSLVGLYMRLGLIDLALKLFDELP--ERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
Y+ ++L Y G + A KLFDE+P E++ W +L F GL + L+ E++
Sbjct: 44 YLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR 103
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
VE++ +S L C+ Q HG +K+G V T++ V NAL+D Y CG +
Sbjct: 104 RKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMG-VLTSVKVCNALMDMYGKCGLV 162
Query: 136 SEAKKSFQAI-------------------------------PMEDVLSWNSMLSVYADNG 164
SE K+ F+ + P + ++W M++ Y G
Sbjct: 163 SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Query: 165 LFLDALELLYIMQFW-GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIK----MGFDNG 219
+ LELL M F G + + L+ +++GN + G +H +K MG +
Sbjct: 223 FTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEAS 282
Query: 220 --SVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGL 277
V V +AL+DMY KCG+I ++++ + + ++ N+L + L G V +MF
Sbjct: 283 YDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQ 342
Query: 278 MVDEGIGLDEVTFST 292
M+ E + D++TF+
Sbjct: 343 MIRE-VKPDDLTFTA 356
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 9/223 (4%)
Query: 38 KLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLD-NVELNGLSFCYLIRGCSNK 96
++F E+PERN W +++ G+ G E+L L E+ LN ++ C ++ C+
Sbjct: 198 EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQS 257
Query: 97 RFFDEGSQLHGHVIKVGWV------DTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDV 150
G +H + +K + ++ V ALVD Y+ CG + + F+ + +V
Sbjct: 258 GNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNV 317
Query: 151 LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCC 210
++WN++ S A +G +++ M KP +F L+ S +G G +
Sbjct: 318 VTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHS 376
Query: 211 VIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE 253
+ G + H + ++D+ G+ G I+ A +P+ E
Sbjct: 377 LRFYGLEPKVDHY-ACMVDLLGRAGLIEEAEILMREMPVPPNE 418
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
++ +G++LV +Y + G ID ++ +F + +RN+ TWN + G G ++ ++ ++
Sbjct: 285 DVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM- 343
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
+ V+ + L+F ++ CS+ DEG + H ++ ++ + +VD G +
Sbjct: 344 IREVKPDDLTFTAVLSACSHSGIVDEGWRCF-HSLRFYGLEPKVDHYACMVDLLGRAGLI 402
Query: 136 SEAKKSFQAIPM 147
EA+ + +P+
Sbjct: 403 EEAEILMREMPV 414
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 200/431 (46%), Gaps = 4/431 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
H AIK G ++++ +SLV +Y + G + LA ++FDE+ ER++ W ++ G
Sbjct: 236 THALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKR 295
Query: 64 FDELLGLYNE-IKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
E LGL+ I + + N + ++ + + G ++H HV+K FV
Sbjct: 296 QWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVH 355
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
+ L+D Y CG ++ ++ F + +SW +++S YA NG F AL + MQ G +
Sbjct: 356 SGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFR 415
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P + + L + ++ G +IHC +K F +V + ++L+ MY KCG + +
Sbjct: 416 PDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFL-PNVSLVTSLMVMYSKCGVPEYPIR 474
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
++ L +++ +++ + + E+F LM+ D VT
Sbjct: 475 LFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKA 534
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H +K +ES VS +I Y + G + + F+ + + +T+II
Sbjct: 535 LKLGKELHGHI--LKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAII 592
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
+ N L + + E M+ +G P+ TF VL+ CS +G V+E FN M ++ +
Sbjct: 593 EAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNL 652
Query: 423 SPDRDHFSCMV 433
P +H+S ++
Sbjct: 653 QPSEEHYSLVI 663
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 174/403 (43%), Gaps = 6/403 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH G N ++ + LV +Y G + A K+FDE N+ +WN +LRG
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 62 G--LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNI 119
G + ++L + E++ V+LN S + + + +G + H IK G ++ +
Sbjct: 191 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNS-V 249
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
F+ +LVD Y CG + A++ F I D++ W +M++ A N +AL L M
Sbjct: 250 FLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISE 309
Query: 180 GK-KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
K P+ L + G ++H V+K V S LID+Y KCGD+
Sbjct: 310 EKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMA 369
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
+ + + +LM+ G D M EG D VT +T
Sbjct: 370 SGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIAT--VLPV 427
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCF 358
HC A+K + +VS+ SL+ Y + G ++F+++ NV +
Sbjct: 428 CAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAW 487
Query: 359 TSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
T++I+ + N + +E+ M+ +PD VT VLT CS
Sbjct: 488 TAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 156/346 (45%), Gaps = 6/346 (1%)
Query: 68 LGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVD 127
L + + ++ + +N +F L+ C ++ G Q+H H I++ +++N F+ LV
Sbjct: 96 LTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVH-IRINGLESNEFLRTKLVH 154
Query: 128 FYSACGCLSEAKKSFQAIPMEDVLSWNSML--SVYADNGLFLDALELLYIMQFWGKKPSI 185
Y+ACG + +A+K F +V SWN++L +V + + D L M+ G ++
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 186 RSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYE 245
S + G++ H IK G N SV ++++L+DMY KCG + A ++
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFN-SVFLKTSLVDMYFKCGKVGLARRVFD 273
Query: 246 SLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMV-DEGIGLDEVTFSTXXXXXXXXXXXX 304
+ + +++ L H + +F M+ +E I + V +T
Sbjct: 274 EIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALK 333
Query: 305 XXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIING 364
H K Y V LID Y + G + ++VF N +T++++G
Sbjct: 334 LGKEVHAHVLKSK-NYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSG 392
Query: 365 FAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
+A NG Q L + M ++G +PD VT VL C+ +++G+
Sbjct: 393 YAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGK 438
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 119/237 (50%), Gaps = 1/237 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC A+K F N+ + +SL+ +Y + G+ + ++LFD L +RN+ W ++ + E
Sbjct: 440 IHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCD 499
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ ++ + L + ++ ++ CS+ + G +LHGH++K + ++ FV+
Sbjct: 500 LRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF-ESIPFVSA 558
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
++ Y CG L A SF A+ ++ L+W +++ Y N LF DA+ M G P
Sbjct: 559 RIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTP 618
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+ +F L++ S+ G + +++M S S +I++ +CG ++ A
Sbjct: 619 NTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 225/505 (44%), Gaps = 45/505 (8%)
Query: 31 GLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLI 90
G + A KLFDE+P+ +++ N VLRG + ++ + LY E++ V + +F +++
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 91 RGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDV 150
+ CS + G HG V++ G+V N +V NAL+ F++ CG L A + F
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFV-LNEYVKNALILFHANCGDLGIASELFDDSAKAHK 178
Query: 151 LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCC 210
++W+SM S YA G +A+ L M + + + I C
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEMPY-------------------KDQVAWNVMITGC 219
Query: 211 VIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDD 270
+ KC ++ +A ++ + N++++ ++CG +
Sbjct: 220 L---------------------KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 271 VFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXH---CCAIKLGYESDVSVS 327
+F M D G D VT + + ++ +
Sbjct: 259 ALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIW 318
Query: 328 CSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLK 387
+LID Y + G + + +VF + ++ + ++I G A + + +EM E M R +
Sbjct: 319 NALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVW 377
Query: 388 PDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXX 447
P+ VTF+ V+ CSHSG V+EGR F+ M ++ I P+ H+ CMV
Sbjct: 378 PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFM 437
Query: 448 XXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGE 507
+ ++W +LL +C+++ N +G+ A + LL + ++ ++ +SN Y+ TG+
Sbjct: 438 FVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQ 497
Query: 508 FEASMQIKEIAIARKMTKEIGHSLI 532
++ +++++ ++ K G SLI
Sbjct: 498 WDGVQKVRKMFDDTRVKKPTGVSLI 522
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 13/193 (6%)
Query: 16 NLYIGS----SLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLY 71
++Y+G+ +L+ +Y + G ID A+++F + +R+L+TWN ++ G L + + ++
Sbjct: 310 SIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA-LHHAEGSIEMF 368
Query: 72 NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSA 131
E++ V N ++F +I CS+ DEG + + + ++ NI +VD
Sbjct: 369 EEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGR 428
Query: 132 CGCLSEAKKSFQAIPME-DVLSWNSML---SVYADNGLFLDALELLYIMQFWGKKPSIRS 187
G L EA +++ +E + + W ++L +Y + L A E L M +K
Sbjct: 429 AGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSM----RKDESGD 484
Query: 188 FVGFLNLSSKTGN 200
+V N+ + TG
Sbjct: 485 YVLLSNIYASTGQ 497
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 228/514 (44%), Gaps = 49/514 (9%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + G I + LV Y+ G + A K+FDE+P+R+++ +++ G
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGY 97
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ E L + E+ D ++L+ L++ N + G +H V+K + +++ F+ +
Sbjct: 98 YQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSY-ESDAFIVS 156
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+L+D YS G + A+K F + +D++ +N+M+S YA+N +AL L+ M+ G KP
Sbjct: 157 SLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKP 216
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ T NAL GF + ++N
Sbjct: 217 DV-----------ITWNALIS----------GFSH------------------MRNEEKV 237
Query: 244 YESLPMTSLE-------CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX 296
E L + L+ S+++ L+H + F+ F M+ G+ + T T
Sbjct: 238 SEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA 297
Query: 297 XXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVF 356
H ++ G E V +L+D Y + G + + +F + P
Sbjct: 298 CTTLAYMKHGKEI--HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTV 355
Query: 357 CFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
F S+I +A +GL + +E+ + M G K D +TF +LT CSH+GL + G+ +F M
Sbjct: 356 TFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLM 415
Query: 417 ESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETV 476
++ + I P +H++CMV D +W +LL +CR H N +
Sbjct: 416 QNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMEL 475
Query: 477 GRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEA 510
R AAK L L+PE+ L +++ Y+ G +E+
Sbjct: 476 ARIAAKHLAELEPENSGNGLLLTSLYANAGSWES 509
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 137/333 (41%), Gaps = 49/333 (14%)
Query: 85 SFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQA 144
S+ LI R F G LH H++ G + +A LV FY CG + +A+K F
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSG-IARLTRIAAKLVTFYVECGKVLDARKVFDE 76
Query: 145 IPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFG 204
+P D+ M+ A NG + ++L+ M G K L S + FG
Sbjct: 77 MPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFG 136
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLH 264
IHC V+K +++ + + S+LIDMY K G++ NA + L L N++++ +
Sbjct: 137 KMIHCLVLKFSYESDAF-IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYAN 195
Query: 265 CGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDV 324
D+ + M GI D +T++
Sbjct: 196 NSQADEALNLVKDMKLLGIKPDVITWN--------------------------------- 222
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIPL-------PNVFCFTSIINGFAWNGLGKQCLEM 377
+LI + H+ +KV E + L P+V +TSII+G N ++ +
Sbjct: 223 ----ALISGF---SHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDA 275
Query: 378 LEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
+ M+ GL P+ T + +L C+ ++ G+
Sbjct: 276 FKQMLTHGLYPNSATIITLLPACTTLAYMKHGK 308
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 4/242 (1%)
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
SI S+V + + + G +H ++ G + + + L+ Y +CG + +A
Sbjct: 15 SIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLT-RIAAKLVTFYVECGKVLDARKV 73
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
++ +P + C ++ + G + + F M +G+ LD F
Sbjct: 74 FDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD--AFIVPSLLKASRNLL 131
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
HC +K YESD + SLID Y + G V ++KVF + ++ F ++I+
Sbjct: 132 DREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMIS 191
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
G+A N + L +++ M G+KPD +T+ +++G SH E+ + M L G
Sbjct: 192 GYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM-CLDGYK 250
Query: 424 PD 425
PD
Sbjct: 251 PD 252
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/521 (24%), Positives = 232/521 (44%), Gaps = 46/521 (8%)
Query: 43 LPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEG 102
L +L +N +L+ + F ++L L+ E++ + + + +++ R EG
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 103 SQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYAD 162
++HG+ +K G ++ + +V+N+L+ Y++ G + K F +P DV+SWN ++S Y
Sbjct: 66 EKVHGYAVKAG-LEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 163 NGLFLDALELLYIM-QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSV 221
NG F DA+ + M Q K + V L+ S N G +I+ V+ F+ SV
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEM-SV 182
Query: 222 HVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDV---------- 271
+ +AL+DM+ KCG + A + ++S+ +++C S++ + G +D+
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 272 ---------------------FEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXX 310
E+F M GI D F
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPD--NFVLVSLLTGCAQTGALEQGKW 300
Query: 311 XHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGL 370
H + D V +L+D Y + G + + +VF +I + +TS+I G A NG+
Sbjct: 301 IHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGM 360
Query: 371 GKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFS 430
+ L++ M G++ D +TF+ VLT C+H G V EGR +F+SM H + P +H S
Sbjct: 361 SGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS 420
Query: 431 CMVXXXXXXXXXXXXXXXXXQTPGRGDCVM---WSSLLRSCRVHRNETVGRRAAKILLGL 487
C++ + G D + + SLL + R + N + R A+ L +
Sbjct: 421 CLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKV 480
Query: 488 DPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIG 528
+ D + H +++ Y+ +E ++ R+ K++G
Sbjct: 481 EVSDSSAHTLLASVYASANRWE------DVTNVRRKMKDLG 515
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 155/320 (48%), Gaps = 35/320 (10%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
VH A+K G F+ Y+ +SL+G+Y LG I++ K+FDE+P+R++ +WN ++ + G
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNG 126
Query: 63 LFDELLGLYNEIKLD-NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
F++ +G++ + + N++ + + + CS + + G +++ V V + ++ +
Sbjct: 127 RFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV--VTEFEMSVRI 184
Query: 122 ANALVDFYSACGCLSEAKKSFQAI-------------------------------PMEDV 150
NALVD + CGCL +A+ F ++ P++DV
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 151 LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCC 210
+ W +M++ Y F +ALEL MQ G +P V L ++TG G IH
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 211 VIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDD 270
+ + V V +AL+DMY KCG I+ A+ + + SL+ L G+
Sbjct: 305 INENRVTVDKV-VGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 271 VFEMFGLMVDEGIGLDEVTF 290
+++ M + G+ LD +TF
Sbjct: 364 ALDLYYEMENVGVRLDAITF 383
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 114/249 (45%), Gaps = 3/249 (1%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
N+ +S+V Y+ G ID A LF+ P +++ W ++ G+ + FDE L L+ ++
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 271
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
+ + L+ GC+ ++G +HG+ I V + V ALVD Y+ CGC+
Sbjct: 272 TAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY-INENRVTVDKVVGTALVDMYAKCGCI 330
Query: 136 SEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLS 195
A + F I D SW S++ A NG+ AL+L Y M+ G + +FV L
Sbjct: 331 ETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTAC 390
Query: 196 SKTGNALFGMQI-HCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC 254
+ G G +I H + S H S LID+ + G + A + + S E
Sbjct: 391 NHGGFVAEGRKIFHSMTERHNVQPKSEHC-SCLIDLLCRAGLLDEAEELIDKMRGESDET 449
Query: 255 CNSLMTSLL 263
+ SLL
Sbjct: 450 LVPVYCSLL 458
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 250/540 (46%), Gaps = 23/540 (4%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC +K G + + +SL+ +Y + K+FDE+ R+ ++ ++ C+ GL
Sbjct: 69 LHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGL 128
Query: 64 FDELLGLYNE------IKLDNVELNGLSFCYLIRGCSNK--RFFDEGSQLHGHVIKVGWV 115
E + L E I + + L+ C + G S+K R F H V+ +
Sbjct: 129 LYEAMKLIKEMYFYGFIPKSELVASLLALCTRM-GSSSKVARMF------HALVLVDERM 181
Query: 116 DTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYI 175
++ ++ ALVD Y + A F + +++ +SW +M+S N + ++L
Sbjct: 182 QESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRA 241
Query: 176 MQFWGKKPSIRSFVGFLN--LSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGK 233
MQ +P+ + + L + G++L +IH + G + + +A + MY +
Sbjct: 242 MQRENLRPNRVTLLSVLPACVELNYGSSLVK-EIHGFSFRHGC-HADERLTAAFMTMYCR 299
Query: 234 CGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTX 293
CG++ + +E+ + + +S+++ G +V + M EGI + VT
Sbjct: 300 CGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTL--L 357
Query: 294 XXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP 353
H +K G+ S + + +LID Y + G + +++VF ++
Sbjct: 358 AIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Query: 354 NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVF 413
++ ++S+IN + +G G + LE+ + MI+ G + D + FL +L+ C+H+GLVEE + +F
Sbjct: 418 DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF 477
Query: 414 NSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVH-R 472
H + +H++C + P + +WSSLL +C H R
Sbjct: 478 TQAGKYH-MPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGR 536
Query: 473 NETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ G+ A L+ +P++ A ++ +S ++E+G + A+ +++ + RK+ K G S I
Sbjct: 537 LDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKI 596
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 58/104 (55%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
++VH + +K GF ++ +G++L+ +Y + G + A ++F EL E++L +W+ ++ +
Sbjct: 373 STVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLH 432
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQL 105
G E L ++ + E++ ++F ++ C++ +E +
Sbjct: 433 GHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTI 476
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 218/495 (44%), Gaps = 12/495 (2%)
Query: 39 LFDELPERNLATWNLVLRGFCELGLFDELLG-LYNEIKLDNVELNGLSFCYLIRGCSNKR 97
+F+ +P WN +++G+ LF E + L ++ + +F +++ CSN
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 98 FFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSML 157
GS +HG V+++G+ D ++ V + VDFY C L A+K F +P + +SW +++
Sbjct: 125 QVRVGSSVHGLVLRIGF-DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 158 SVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFD 217
Y +G +A + +M + ++ S+ ++ K+G+ + ++ + K
Sbjct: 184 VAYVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR--- 236
Query: 218 NGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGL 277
+ +++ID Y K GD+ +A +E + ++L+ G ++ F++F
Sbjct: 237 --DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 294
Query: 278 MVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRS 337
M + + DE + ++ S V +LID +
Sbjct: 295 MCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQ-RMNKFSSHYVVPALIDMNAKC 353
Query: 338 GHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVL 397
GH+ + K+FE++P ++ + S++ G A +G G + + + E M+ +G+ PD V F +L
Sbjct: 354 GHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVIL 413
Query: 398 TGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGD 457
C S LVEEG F M + I DH+SC+V P
Sbjct: 414 KVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAH 473
Query: 458 CVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEI 517
W SLL C +H N + A+ L L+P+ ++ +SN Y+ + +++
Sbjct: 474 ASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDK 533
Query: 518 AIARKMTKEIGHSLI 532
+TK G S I
Sbjct: 534 MNENGITKICGRSWI 548
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 15/294 (5%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+SVH +++GF ++ +G+S V Y + + A K+F E+PERN +W ++ + +
Sbjct: 130 SSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKS 189
Query: 62 GLFDELLGLYNEIKLDNV-ELNGLSFCYLIRG--CSNKRFFDEGSQLHGHVIKVGWVDTN 118
G +E +++ + N+ N L + G + K+ FDE + +
Sbjct: 190 GELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPK------------RD 237
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
I +++D Y+ G + A+ F+ DV +W++++ YA NG +A ++ M
Sbjct: 238 IISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCA 297
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
KP VG ++ S+ G ++ + + S +V ALIDM KCG +
Sbjct: 298 KNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMD 357
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFST 292
A +E +P L S+M + G + +F MVDEGI DEV F+
Sbjct: 358 RAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTV 411
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 141/314 (44%), Gaps = 28/314 (8%)
Query: 103 SQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYAD 162
+Q+H +I+ G ++ + S+ LS + F+ +P WN ++ Y++
Sbjct: 27 NQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSN 86
Query: 163 NGLFLDALELLYIMQFWG-KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSV 221
LF + + +L M G +P +F + + S G G +H V+++GFD V
Sbjct: 87 KFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVV 146
Query: 222 HVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDE 281
V ++ +D YGKC D+ +A + +P + +L+ + + G +++ MF LM +
Sbjct: 147 -VGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPER 205
Query: 282 GIG-----LDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYE---SDVSVSCSLIDA 333
+G +D + S A KL E D+ S+ID
Sbjct: 206 NLGSWNALVDGLVKSGDLVN------------------AKKLFDEMPKRDIISYTSMIDG 247
Query: 334 YLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTF 393
Y + G ++ ++ +FE+ +V ++++I G+A NG + ++ M K +KPD
Sbjct: 248 YAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIM 307
Query: 394 LCVLTGCSHSGLVE 407
+ +++ CS G E
Sbjct: 308 VGLMSACSQMGCFE 321
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 8/235 (3%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
+S++ Y + G + A LF+E ++ W+ ++ G+ + G +E +++E+ NV+
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 81 LNGLSFCYLIRGCSNKRFFD----EGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLS 136
+ L+ CS F+ S LH + K ++ +V AL+D + CG +
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF----SSHYVVPALIDMNAKCGHMD 357
Query: 137 EAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS 196
A K F+ +P D++S+ SM+ A +G +A+ L M G P +F L +
Sbjct: 358 RAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCG 417
Query: 197 KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
++ G++ + K S S ++++ + G +K A +S+P +
Sbjct: 418 QSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 472
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 18 YIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLD 77
Y+ +L+ + + G +D A KLF+E+P+R+L ++ ++ G G E + L+ ++ +
Sbjct: 341 YVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE 400
Query: 78 NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSE 137
+ + ++F +++ C R +EG + + K + + + +V+ S G L E
Sbjct: 401 GIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKE 460
Query: 138 AKKSFQAIPMEDVLS-WNSML 157
A + +++P E S W S+L
Sbjct: 461 AYELIKSMPFEAHASAWGSLL 481
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 212/493 (43%), Gaps = 54/493 (10%)
Query: 94 SNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGC----LSEAKKSFQAIPMED 149
+N R + SQ+H IK G + + A ++ F + L A K F +P +
Sbjct: 31 NNCRTIRDLSQIHAVFIKSGQM-RDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 150 VLSWNSMLSVYA--DNGLFLDALELLY-IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQ 206
SWN+++ ++ D L A+ L Y +M +P+ +F L +KTG G Q
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 207 IHCCVIKMGF--------------------------------------------DNGSVH 222
IH +K GF +G +
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 223 VQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG 282
+ + +ID Y + GD K A ++ + S+ N++++ G D E+F M
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 283 IGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLL 342
I + VT + H A G D + +LID Y + G +
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWL--HLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 343 SQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSH 402
+ VFE++P NV ++++INGFA +G ++ M + G++P V ++ +LT CSH
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 387
Query: 403 SGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWS 462
GLVEEGR F+ M S+ G+ P +H+ CMV P + D V+W
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 447
Query: 463 SLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARK 522
+LL +CR+ N +G+R A IL+ + P D ++ +SN Y+ G + +++ +
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Query: 523 MTKEIGHSLIGLN 535
+ K+ G SLI ++
Sbjct: 508 IRKDPGCSLIDID 520
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 171/429 (39%), Gaps = 83/429 (19%)
Query: 33 IDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGL---YNEIKLDNVELNGLSFCYL 89
+D A K+F+++P+RN +WN ++RGF E L+ + Y + + VE N +F +
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 90 IRGCSNKRFFDEGSQLHGHVIKVGW----------------------------------- 114
++ C+ EG Q+HG +K G+
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 115 ---------VDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGL 165
D I + N ++D Y G A+ F + V+SWN+M+S Y+ NG
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 166 FLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQS 225
F DA+E+ M+ +P+ + V L S+ G+ G +H G V + S
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGS 313
Query: 226 ALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGL 285
ALIDMY KCG I+ A+ +E LP ++ ++++ G D + F M G+
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 286 DEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQK 345
+V + ++ +CS + G SQ
Sbjct: 374 SDVAY-------------------------------INLLTACSH-GGLVEEGRRYFSQM 401
Query: 346 VFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGL 405
V P + + +++ +GL + E + M +KPD V + +L C G
Sbjct: 402 VSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM---PIKPDDVIWKALLGACRMQGN 458
Query: 406 VEEGRLVFN 414
VE G+ V N
Sbjct: 459 VEMGKRVAN 467
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 116/227 (51%), Gaps = 1/227 (0%)
Query: 23 LVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELN 82
++ YMRLG A LFD++ +R++ +WN ++ G+ G F + + ++ E+K ++ N
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 83 GLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSF 142
++ ++ S + G LH + G + + + +AL+D YS CG + +A F
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSG-IRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 143 QAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNAL 202
+ +P E+V++W++M++ +A +G DA++ M+ G +PS +++ L S G
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Query: 203 FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
G + ++ + + ++D+ G+ G + A ++P+
Sbjct: 393 EGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPI 439
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H A G + +GS+L+ +Y + G+I+ A+ +F+ LP N+ TW+ ++ GF G
Sbjct: 296 LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQ 355
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ + + +++ V + +++ L+ CS+ +EG + ++ V ++ I
Sbjct: 356 AGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYG 415
Query: 124 ALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSML 157
+VD G L EA++ +P++ D + W ++L
Sbjct: 416 CMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 236/536 (44%), Gaps = 49/536 (9%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLID---LALKLFDELPERNLATWNLVLRGF 58
+H IK G + Y L+ L+ + + D A +L PE + +N ++RG+
Sbjct: 22 TQIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGY 80
Query: 59 CELGLFDELLGLYNEIKLDN-VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDT 117
E + ++ E+ V + SF ++I+ N R G Q+H +K G +++
Sbjct: 81 SESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHG-LES 139
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
++FV L+ Y CGC+ A+K F + ++++WN++++ A E+
Sbjct: 140 HLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIF---- 195
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
K +R+ + + ++ Y K G++
Sbjct: 196 ---DKMLVRNHTSW---------------------------------NVMLAGYIKAGEL 219
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXX 297
++A + +P ++++ + H G ++ F F + G+ +EV+ +
Sbjct: 220 ESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLT--GVLS 277
Query: 298 XXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPN-VF 356
H K GY VSV+ +LID Y R G+V +++ VFE + +
Sbjct: 278 ACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIV 337
Query: 357 CFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
+TS+I G A +G G++ + + M G+ PD ++F+ +L CSH+GL+EEG F+ M
Sbjct: 338 SWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEM 397
Query: 417 ESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETV 476
+ ++ I P+ +H+ CMV Q P ++W +LL +C H N +
Sbjct: 398 KRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIEL 457
Query: 477 GRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ + L LDP + + +SN Y+ G+++ I++ I +++ K SL+
Sbjct: 458 AEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLV 513
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 141/332 (42%), Gaps = 49/332 (14%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDF--YSACGCLSEAKKSFQAIP 146
L+ C N R +Q+HG IK G VDT+ + L+ S L A++ P
Sbjct: 11 LLNSCKNLRAL---TQIHGLFIKYG-VDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 147 MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK-PSIRSFVGFLNLSSKTGNALFGM 205
D +N+++ Y+++ +++ + M G P SF + + G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
Q+HC +K G ++ + V + LI MYG CG ++ A ++ + +L N+++T+
Sbjct: 127 QMHCQALKHGLES-HLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 266 GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVS 325
V E+F D+ + + +++
Sbjct: 186 NDVAGAREIF----DKMLVRNHTSWNV--------------------------------- 208
Query: 326 VSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKG 385
++ Y+++G + ++++F ++P + ++++I G A NG + + R G
Sbjct: 209 ----MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAG 264
Query: 386 LKPDRVTFLCVLTGCSHSGLVEEGRLVFNSME 417
+ P+ V+ VL+ CS SG E G+++ +E
Sbjct: 265 MSPNEVSLTGVLSACSQSGSFEFGKILHGFVE 296
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 215/497 (43%), Gaps = 52/497 (10%)
Query: 69 GLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDF 128
G ++EI + EL S + C N ++ Q+HGHV++ G +D + ++ L+
Sbjct: 36 GTFSEIS-NQKELLVSSLISKLDDCIN---LNQIKQIHGHVLRKG-LDQSCYILTKLIRT 90
Query: 129 YSACGCLSE--AKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIR 186
+ G + A++ + + + W +++ YA G F +A+ + M+ P
Sbjct: 91 LTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSF 150
Query: 187 SFVGFLNLSSKTGNALFGMQIHCCVIKM-GFDNGSVHVQSALIDMYGKC----------- 234
+F L + G Q H ++ GF V+V + +IDMY KC
Sbjct: 151 TFSALLKACGTMKDLNLGRQFHAQTFRLRGF--CFVYVGNTMIDMYVKCESIDCARKVFD 208
Query: 235 --------------------GDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEM 274
G+++ A +ESLP + +++T + E
Sbjct: 209 EMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEY 268
Query: 275 FGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESD--VSVSCSLID 332
F M GI DEVT + A K GY V + +LID
Sbjct: 269 FDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ--IAQKSGYSPSDHVVIGSALID 326
Query: 333 AYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKG-LKPDRV 391
Y + G+V + VF + NVF ++S+I G A +G ++ L + M+ + +KP+ V
Sbjct: 327 MYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTV 386
Query: 392 TFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQ 451
TF+ L CSHSGLV++GR VF+SM G+ P RDH++CMV
Sbjct: 387 TFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKT 446
Query: 452 TPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEAS 511
+W +LL +CR+H N + AA+ L L+P+ ++ +SN Y+ G++
Sbjct: 447 MSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGV 506
Query: 512 MQIKEIAIARKMTKEIG 528
+++ RK+ KE G
Sbjct: 507 LRV------RKLIKEKG 517
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 142/324 (43%), Gaps = 36/324 (11%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLI--DLALKLFDELPERNLATWNLVLRGFC 59
+H ++ G + YI + L+ +LG+ A ++ + + RN W V+RG+
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 60 ELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNI 119
G FDE + +Y ++ + + +F L++ C + + G Q H ++ +
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGF-CFV 184
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVY------------------- 160
+V N ++D Y C + A+K F +P DV+SW +++ Y
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK 244
Query: 161 ------------ADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
A N +ALE M+ G + + G+++ ++ G + + +
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 209 CCVIKMGFD-NGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGI 267
K G+ + V + SALIDMY KCG+++ AV+ + S+ ++ +S++ L G
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 268 VDDVFEMFGLMVDEG-IGLDEVTF 290
+ +F MV + I + VTF
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTF 388
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 206/421 (48%), Gaps = 6/421 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H A+K +Y G++L+ +RLG + A K+FD +PE+N TW ++ G+ + GL
Sbjct: 104 IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGL 163
Query: 64 FDELLGLYNEIKLDNVEL-NGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
DE L+ + + N F L+ CS + F+ G Q+HG+++KVG N+ V
Sbjct: 164 EDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV--GNLIVE 221
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
++LV FY+ CG L+ A ++F + +DV+SW +++S + G + A+ + M
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL 281
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+ + L S+ FG Q+H V+K V V ++L+DMY KCG+I +
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKT-DVFVGTSLMDMYAKCGEISDCRK 340
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXX 302
++ + + S++ + G ++ +F +M + + +T
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT--VVSILRACGSV 398
Query: 303 XXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSII 362
H IK E +V + +L+ Y + G + V +Q+P +V +T++I
Sbjct: 399 GALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMI 458
Query: 363 NGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
+G + G + L+ L+ MI++G++P+ T+ L C++S + GR + + + H +
Sbjct: 459 SGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL 518
Query: 423 S 423
S
Sbjct: 519 S 519
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 198/404 (49%), Gaps = 19/404 (4%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVL-------R 56
VH +K+G G NL + SSLV Y + G + AL+ FD + E+++ +W V+
Sbjct: 206 VHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGH 264
Query: 57 GFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVD 116
G +G+F +G+ N L N + C +++ CS ++ G Q+H V+K +
Sbjct: 265 GIKAIGMF---IGMLNHWFLPN----EFTVCSILKACSEEKALRFGRQVHSLVVK-RMIK 316
Query: 117 TNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM 176
T++FV +L+D Y+ CG +S+ +K F + + ++W S+++ +A G +A+ L IM
Sbjct: 317 TDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIM 376
Query: 177 QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGD 236
+ + + V L G L G ++H +IK + +V++ S L+ +Y KCG+
Sbjct: 377 KRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEK-NVYIGSTLVWLYCKCGE 435
Query: 237 IKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX 296
++A + + LP + ++++ G + + M+ EG+ + T+S+
Sbjct: 436 SRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKA 495
Query: 297 XXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVF 356
H A K S+V V +LI Y + G V + +VF+ +P N+
Sbjct: 496 CANSESLLIGRSI--HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLV 553
Query: 357 CFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGC 400
+ ++I G+A NG ++ L+++ M +G + D F +L+ C
Sbjct: 554 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
S+H A K N+++GS+L+ +Y + G + A ++FD +PE+NL +W ++ G+
Sbjct: 506 RSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARN 565
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSN 95
G E L L ++ + E++ F ++ C +
Sbjct: 566 GFCREALKLMYRMEAEGFEVDDYIFATILSTCGD 599
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/543 (23%), Positives = 233/543 (42%), Gaps = 45/543 (8%)
Query: 1 RNSVHCRAIKL-------GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPE----RNLA 49
+N H A++L G L + L+G Y +LG D A+ L ++ ++
Sbjct: 259 QNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVF 318
Query: 50 TWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHV 109
TW ++ G G+ + L ++ ++ L V N ++ + CS + ++GS++H
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIA 378
Query: 110 IKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDA 169
+K+G++D ++ V N+LVD YS CG L +A+K F ++ +DV +WNSM++ Y G A
Sbjct: 379 VKMGFID-DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKA 437
Query: 170 LELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALID 229
EL MQ +P+I ++ ++ K G+ M L
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMD--------------------LFQ 477
Query: 230 MYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVT 289
K G ++ +T+ N ++ + G D+ E+F M + VT
Sbjct: 478 RMEKDGKVQRNTATW-----------NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Query: 290 FSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQ 349
+ H C ++ ++ +V +L D Y +SG + S+ +F
Sbjct: 527 ILS--LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLG 584
Query: 350 IPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
+ ++ + S+I G+ +G L + M +G+ P+R T ++ G V+EG
Sbjct: 585 METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEG 644
Query: 410 RLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCR 469
+ VF S+ + + I P +H S MV + + + +W S L CR
Sbjct: 645 KKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCR 704
Query: 470 VHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGH 529
+H + + AA+ L L+PE+ A VS Y+ + S++ + + K +G
Sbjct: 705 IHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQ 764
Query: 530 SLI 532
S I
Sbjct: 765 SWI 767
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 198/422 (46%), Gaps = 42/422 (9%)
Query: 3 SVHC-RAIKLGFGF----NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRG 57
S+H R + FG ++++ + L+ +Y + G I A K+FD + ERNL TW+ ++
Sbjct: 96 SIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGA 155
Query: 58 FCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDT 117
+ + E+ L+ + D V + F +++GC+N + G +H VIK+G + +
Sbjct: 156 YSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLG-MSS 214
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
+ V+N+++ Y+ CG L A K F+ + DV++WNS+L Y NG +A+EL+ M+
Sbjct: 215 CLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME 274
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
G P + ++ N L G G++ GKC
Sbjct: 275 KEGISPGLVTW-----------NILIG----------GYNQ------------LGKCDAA 301
Query: 238 KNAVSTYESLPMTS-LECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX 296
+ + E+ +T+ + ++++ L+H G+ +MF M G+ + VT +
Sbjct: 302 MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS--AV 359
Query: 297 XXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVF 356
H A+K+G+ DV V SL+D Y + G + ++KVF+ + +V+
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY 419
Query: 357 CFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
+ S+I G+ G + E+ M L+P+ +T+ +++G +G E +F M
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Query: 417 ES 418
E
Sbjct: 480 EK 481
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 139/321 (43%), Gaps = 45/321 (14%)
Query: 99 FDEGSQLHGHVIKVGW---VDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNS 155
D GS G ++ + + ++FV L+ Y+ CGC+++A+K F ++ ++ +W++
Sbjct: 92 IDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSA 151
Query: 156 MLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMG 215
M+ Y+ + + +L +M G P F L + G+ G IH VIK+G
Sbjct: 152 MIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLG 211
Query: 216 FDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMF 275
+ + V ++++ +Y KCG++ A + + + NS++ + G ++ E+
Sbjct: 212 M-SSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELV 270
Query: 276 GLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYL 335
M EGI VT++ LI Y
Sbjct: 271 KEMEKEGISPGLVTWNI-------------------------------------LIGGYN 293
Query: 336 RSGHVLLSQKVFEQIP----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRV 391
+ G + + +++ +VF +T++I+G NG+ Q L+M M G+ P+ V
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 392 TFLCVLTGCSHSGLVEEGRLV 412
T + ++ CS ++ +G V
Sbjct: 354 TIMSAVSACSCLKVINQGSEV 374
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 207/429 (48%), Gaps = 8/429 (1%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
L+R S+K + ++H V++ G+ + N + L + G + A++ F +
Sbjct: 16 LLRASSSKP--KQLKKIHAIVLRTGFSEKNSLLTQLLENLV-VIGDMCYARQVFDEMHKP 72
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
+ WN++ Y N L ++L L M+ G +P ++ + S+ G+ G +H
Sbjct: 73 RIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALH 132
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
V+K GF + V + L+ MY K G++ +A +ES+ + L N+ + + G
Sbjct: 133 AHVVKYGFGCLGI-VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNS 191
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
E F M + + D +F+ + A K + ++ V
Sbjct: 192 AIALEYFNKMCADAVQFD--SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVEN 249
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
+ +D +L+ G+ ++ +FE++ NV ++++I G+A NG ++ L + M +GL+P
Sbjct: 250 ARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRP 309
Query: 389 DRVTFLCVLTGCSHSGLVEEGRLVFNSM--ESLHGISPDRDHFSCMVXXXXXXXXXXXXX 446
+ VTFL VL+ CSH+GLV EG+ F+ M + + P ++H++CMV
Sbjct: 310 NYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAY 369
Query: 447 XXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETG 506
+ P D +W +LL +C VHR+ +G++ A +L+ P+ + H+ +SN Y+ G
Sbjct: 370 EFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAG 429
Query: 507 EFEASMQIK 515
+++ +++
Sbjct: 430 KWDCVDKVR 438
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 120/249 (48%), Gaps = 3/249 (1%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
++H +K GFG + + LV +YM+ G + A LF+ + ++L WN L + G
Sbjct: 130 ALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTG 189
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
L +N++ D V+ + + ++ C + G +++ K +D NI V
Sbjct: 190 NSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEE-IDCNIIVE 248
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
NA +D + CG A+ F+ + +V+SW++M+ YA NG +AL L MQ G +
Sbjct: 249 NARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR 308
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQ--SALIDMYGKCGDIKNA 240
P+ +F+G L+ S G G + +++ N + + ++D+ G+ G ++ A
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEA 368
Query: 241 VSTYESLPM 249
+ +P+
Sbjct: 369 YEFIKKMPV 377
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 141/291 (48%), Gaps = 6/291 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H ++ GF + + L+ + +G + A ++FDE+ + + WN + +G+
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
L E L LY +++ V + ++ ++++ S F G LH HV+K G+ I V
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI-V 146
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
A LV Y G LS A+ F+++ ++D+++WN+ L+V G ALE Y +
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALE--YFNKMCAD 204
Query: 182 KPSIRSF--VGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
SF V L+ + G+ G +I+ K D ++ V++A +DM+ KCG+ +
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID-CNIIVENARLDMHLKCGNTEA 263
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
A +E + ++ ++++ G + +F M +EG+ + VTF
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTF 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
++ RA K N+ + ++ + ++++ G + A LF+E+ +RN+ +W+ ++ G+ G
Sbjct: 232 IYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD 291
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E L L+ ++ + + N ++F ++ CS+ +EG + +++ D N+
Sbjct: 292 SREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN--DKNLEPRK 349
Query: 124 A----LVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLSVYA 161
+VD G L EA + + +P+E D W ++L A
Sbjct: 350 EHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 216/452 (47%), Gaps = 10/452 (2%)
Query: 88 YLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACG---CLSEAKKSFQA 144
YL++ C N DE Q+H IK+ ++ F A++++ + G ++ A F+
Sbjct: 35 YLLKRCHN---IDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRG 91
Query: 145 IPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFG 204
I +N+M+ Y + F +AL M G +P ++ L ++ + G
Sbjct: 92 IDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREG 151
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLH 264
QIH V K+G + V VQ++LI+MYG+CG+++ + + +E L + +S++++
Sbjct: 152 KQIHGQVFKLGLE-ADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAG 210
Query: 265 CGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDV 324
G+ + +F M E L H ++ E ++
Sbjct: 211 MGMWSECLLLFRGMCSE-TNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNI 269
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK 384
V SL+D Y++ G + + +F+++ N ++++I+G A +G G+ L M MI++
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXX 444
GL+PD V ++ VL CSHSGLV+EGR VF M + P +H+ C+V
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 445 XXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSE 504
P + V+W + L CRV +N +G+ AA+ LL L + +L +SN YS+
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQ 449
Query: 505 TGEFEASMQIK-EIAIARKMTKEIGHSLIGLN 535
++ + + EIAI + + + G S++ L
Sbjct: 450 GQMWDDVARTRTEIAI-KGLKQTPGFSIVELK 480
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 123/241 (51%), Gaps = 3/241 (1%)
Query: 51 WNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVI 110
+N ++RG+ + F+E L YNE+ E + ++ L++ C+ + EG Q+HG V
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 111 KVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDAL 170
K+G ++ ++FV N+L++ Y CG + + F+ + + SW+SM+S A G++ + L
Sbjct: 160 KLG-LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECL 218
Query: 171 ELLYIM-QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALID 229
L M K V L + TG GM IH +++ ++ VQ++L+D
Sbjct: 219 LLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR-NISELNIIVQTSLVD 277
Query: 230 MYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVT 289
MY KCG + A+ ++ + + +++++ L G + MF M+ EG+ D V
Sbjct: 278 MYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVV 337
Query: 290 F 290
+
Sbjct: 338 Y 338
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 80/146 (54%), Gaps = 3/146 (2%)
Query: 15 FNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEI 74
N+ + +SLV +Y++ G +D AL +F ++ +RN T++ ++ G G + L +++++
Sbjct: 267 LNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKM 326
Query: 75 KLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGC 134
+ +E + + + ++ CS+ EG ++ ++K G V+ LVD G
Sbjct: 327 IKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGL 386
Query: 135 LSEAKKSFQAIPME--DVLSWNSMLS 158
L EA ++ Q+IP+E DV+ W + LS
Sbjct: 387 LEEALETIQSIPIEKNDVI-WRTFLS 411
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/529 (23%), Positives = 232/529 (43%), Gaps = 37/529 (6%)
Query: 17 LYIGSSLVGLYMRLGLIDLALKLFDELPERNLATW-NLVLRGFCELGLFDELLGLYNEIK 75
L I +S VG I A KLFD+ P+R+ + N +++ + E + + LY +++
Sbjct: 17 LVISASAVG-------IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLR 69
Query: 76 LDN-VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGC 134
+ + +F L + CS +G QLH + + G+ +++V+ +VD Y+ G
Sbjct: 70 KETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFC-ADMYVSTGVVDMYAKFGK 128
Query: 135 LSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFV----- 189
+ A+ +F +P +SW +++S Y G EL + + + P ++ V
Sbjct: 129 MGCARNAFDEMPHRSEVSWTALISGYIRCG------ELDLASKLFDQMPHVKDVVIYNAM 182
Query: 190 --GFLNLSSKT-GNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYES 246
GF+ T LF H VI + +I Y DI A +++
Sbjct: 183 MDGFVKSGDMTSARRLFDEMTHKTVI----------TWTTMIHGYCNIKDIDAARKLFDA 232
Query: 247 LPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXX 306
+P +L N+++ + +F M LD +
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM-QATTSLDPDDVTILSVLPAISDTGALS 291
Query: 307 XXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFA 366
HC + + V V +++D Y + G + ++++F+++P V + ++I+G+A
Sbjct: 292 LGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYA 351
Query: 367 WNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDR 426
NG + L++ M+ + KPD +T L V+T C+H GLVEEGR F+ M + G++
Sbjct: 352 LNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKI 409
Query: 427 DHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLG 486
+H+ CMV P + ++ SS L +C +++ R K +
Sbjct: 410 EHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVE 469
Query: 487 LDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
L+P++ ++ + N Y+ ++ +K + + KE+G SLI +N
Sbjct: 470 LEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEIN 518
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 21/293 (7%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+H + + GF ++Y+ + +V +Y + G + A FDE+P R+ +W ++ G+ G
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCG 158
Query: 63 LFDELLGLYNEIK--LDNVELNGLSFCYLIRG--CSNKRFFDEGSQLHGHVIKVGWVDTN 118
D L++++ D V N + ++ G S +R FDE + H + W
Sbjct: 159 ELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMT----HKTVITWT--- 211
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
++ Y + A+K F A+P +++SWN+M+ Y N + + L MQ
Sbjct: 212 -----TMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQA 266
Query: 179 WGK-KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
P + + L S TG G HC V + D V V +A++DMY KCG+I
Sbjct: 267 TTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDK-KVKVCTAILDMYSKCGEI 325
Query: 238 KNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMF-GLMVDEGIGLDEVT 289
+ A ++ +P + N+++ G ++F +M++E DE+T
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKP--DEIT 376
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 213/489 (43%), Gaps = 40/489 (8%)
Query: 81 LNGLSFCYLI-RGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
L+G ++ LI CS R E Q+H +IK G + + + L ++ ++ A
Sbjct: 22 LSGNTYLRLIDTQCSTMR---ELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAY 78
Query: 140 KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM--QFWGKKPSIRSFVGFLNLSSK 197
F I ++ WN+++ ++ + A+ + M KP ++ +
Sbjct: 79 LVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGR 138
Query: 198 TGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMY-------------------------- 231
G A G Q+H VIK G ++ S +++ ++ MY
Sbjct: 139 LGQARDGRQLHGMVIKEGLEDDSF-IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNS 197
Query: 232 -----GKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLD 286
KCG I A + ++ +P + NS+++ + G D +MF M ++ + D
Sbjct: 198 MIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPD 257
Query: 287 EVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKV 346
F+ H ++ +E + V +LID Y + G + V
Sbjct: 258 --GFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 347 FEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLV 406
FE P + C+ S+I G A NG ++ +++ + R GL+PD V+F+ VLT C+HSG V
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375
Query: 407 EEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLR 466
F M+ + I P H++ MV P D V+WSSLL
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLS 435
Query: 467 SCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKE 526
+CR N + +RAAK L LDP++ ++ +SN Y+ G FE +++ + + R+M KE
Sbjct: 436 ACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKE 495
Query: 527 IGHSLIGLN 535
+G S I ++
Sbjct: 496 VGCSSIEVD 504
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 184/428 (42%), Gaps = 75/428 (17%)
Query: 33 IDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEI--KLDNVELNGLSFCYLI 90
++ A +F + +N WN ++RGF + + ++ ++ +V+ L++ +
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 91 RGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSE------------- 137
+ +G QLHG VIK G D + F+ N ++ Y CGCL E
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDS-FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 138 ------------------AKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
A+ F +P + +SWNSM+S + NG F DAL++ MQ
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
KP + V LN + G + G IH +++ F+ S+ V +ALIDMY KCG I+
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSI-VVTALIDMYCKCGCIEE 311
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
++ +E P L C NS++ L + G + ++F + G+ D V+F
Sbjct: 312 GLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSF--------- 362
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFT 359
CA + +V + D + R L+ +K + P++ +T
Sbjct: 363 --------IGVLTACA----HSGEVHRA----DEFFR----LMKEKYMIE---PSIKHYT 399
Query: 360 SIINGFAWNGLGKQCLEMLEAMIRK-GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES 418
++N GL LE EA+I+ ++ D V + +L+ C G VE + + +
Sbjct: 400 LMVNVLGGAGL----LEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAK---RAAKC 452
Query: 419 LHGISPDR 426
L + PD
Sbjct: 453 LKKLDPDE 460
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 124/236 (52%), Gaps = 1/236 (0%)
Query: 14 GFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNE 73
GF++ +S++ + + GLID A LFDE+P+RN +WN ++ GF G F + L ++ E
Sbjct: 189 GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFRE 248
Query: 74 IKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACG 133
++ +V+ +G + L+ C+ ++G +H ++++ + N V AL+D Y CG
Sbjct: 249 MQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVR-NRFELNSIVVTALIDMYCKCG 307
Query: 134 CLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLN 193
C+ E F+ P + + WNSM+ A+NG A++L ++ G +P SF+G L
Sbjct: 308 CIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLT 367
Query: 194 LSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
+ +G + + + S+ + ++++ G G ++ A + +++P+
Sbjct: 368 ACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPV 423
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H ++ F N + ++L+ +Y + G I+ L +F+ P++ L+ WN ++ G G
Sbjct: 280 IHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGF 339
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ + L++E++ +E + +SF ++ C++ + + + ++ +I
Sbjct: 340 EERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYT 399
Query: 124 ALVDFYSACGCLSEAKKSFQAIPM-EDVLSWNSMLSV 159
+V+ G L EA+ + +P+ ED + W+S+LS
Sbjct: 400 LMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 126/536 (23%), Positives = 240/536 (44%), Gaps = 16/536 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+ +H +K G + + S L+ L I A +F+ + NL +N ++RG+
Sbjct: 45 SRIHGYMVKTGLDKDDFAVSKLLAFSSVLD-IRYASSIFEHVSNTNLFMFNTMIRGYSIS 103
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF- 120
+ ++N+++ + L+ SF ++ CS + G LHG ++ G++ +F
Sbjct: 104 DEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFM---VFT 160
Query: 121 -VANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLSVYADNGLFLDALELLYIMQF 178
+ NAL+ FY CG +S+A+K F +P D ++++++++ Y AL+L IM+
Sbjct: 161 DLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRK 220
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
++ + + FL+ S G+ H IK+G D +H+ +ALI MYGK G I
Sbjct: 221 SEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL-DLHLITALIGMYGKTGGIS 279
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
+A ++ + N ++ G++++ + M E + + TF
Sbjct: 280 SARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCA 339
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCF 358
++ D + +L+D Y + G + + ++F ++ +V +
Sbjct: 340 YSEAAFVGRTVADLLEEERIAL--DAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSW 397
Query: 359 TSIINGFAWNGLGKQCLEMLEAMIRKG--LKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
T++I+G+ +GL ++ + + M + ++P+ +TFL VL CSH GLV EG F M
Sbjct: 398 TAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRM 457
Query: 417 ESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETV 476
+ +P +H+ C+V P D W +LL +CRV+ N +
Sbjct: 458 VEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADL 517
Query: 477 GRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
G L + A + ++ ++ G E S+ E+ R KE G+S I
Sbjct: 518 GESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLD-NELNKGR---KEAGYSAI 569
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 146/318 (45%), Gaps = 6/318 (1%)
Query: 101 EGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVY 160
E S++HG+++K G +D + F + L+ F S + A F+ + ++ +N+M+ Y
Sbjct: 43 EVSRIHGYMVKTG-LDKDDFAVSKLLAFSSVLD-IRYASSIFEHVSNTNLFMFNTMIRGY 100
Query: 161 ADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGS 220
+ + A + ++ G SF+ L S+ G +H ++ GF +
Sbjct: 101 SISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFT 160
Query: 221 VHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC-NSLMTSLLHCGIVDDVFEMFGLMV 279
+++ALI Y CG I +A ++ +P + ++LM L ++F +M
Sbjct: 161 -DLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMR 219
Query: 280 DEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGH 339
+ ++ T H IK+G + D+ + +LI Y ++G
Sbjct: 220 KSEVVVNVSTL--LSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGG 277
Query: 340 VLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTG 399
+ ++++F+ +V + +I+ +A GL ++C+ +L M + +KP+ TF+ +L+
Sbjct: 278 ISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSS 337
Query: 400 CSHSGLVEEGRLVFNSME 417
C++S GR V + +E
Sbjct: 338 CAYSEAAFVGRTVADLLE 355
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 165/338 (48%), Gaps = 8/338 (2%)
Query: 204 GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLL 263
G QIHC V+K G HVQ+ ++ +Y + + +A ++ +P + + LM +
Sbjct: 135 GKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYV 194
Query: 264 HCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGY-ES 322
CG+ + E+F M+ GI DE FS H K + ES
Sbjct: 195 RCGLGSEGLEVFKEMLVRGIEPDE--FSVTTALTACAQVGALAQGKWIHEFVKKKRWIES 252
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
DV V +L+D Y + G + + +VFE++ NVF + ++I G+A G K+ L+ +
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
Query: 383 RK-GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXX 441
R+ G+KPD V L VL C+H G +EEGR + +ME+ +GI+P +H+SC+V
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGR 372
Query: 442 XXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDP----EDFAVHLQ 497
+ P + +W +LL CR H+N +G A + LL L+ E+ A +Q
Sbjct: 373 LDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQ 432
Query: 498 VSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
+SN Y + +++ + R + K G SL+ ++
Sbjct: 433 LSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVD 470
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Query: 2 NSVHCRAIKLG-FGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE 60
+HC +K G F + ++ + ++ +Y+ L+ A K+FDE+P+ ++ W++++ G+
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
GL E L ++ E+ + +E + S + C+ +G +H V K W+++++F
Sbjct: 196 CGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF 255
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL-YIMQFW 179
V ALVD Y+ CGC+ A + F+ + +V SW +++ YA G A L I +
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERED 315
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFG-MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
G KP +G L + G G + + G H S ++D+ + G +
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHY-SCIVDLMCRAGRLD 374
Query: 239 NAVSTYESLPMTSL 252
+A+ E +PM L
Sbjct: 375 DALDLIEKMPMKPL 388
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 11/255 (4%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLID----LALKLFDELPERNLATWNLVLR- 56
S H I G N Y S L+ ++ L ++ A +FD + N ++ ++R
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 57 ----GFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKV 112
LGL LL + E +++ + L+F +LI C FF G Q+H V+K
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEE--EEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKN 145
Query: 113 GWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALEL 172
G ++ V ++ Y L +A+K F IP DV+ W+ +++ Y GL + LE+
Sbjct: 146 GVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEV 205
Query: 173 LYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYG 232
M G +P S L ++ G G IH V K + V V +AL+DMY
Sbjct: 206 FKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYA 265
Query: 233 KCGDIKNAVSTYESL 247
KCG I+ AV +E L
Sbjct: 266 KCGCIETAVEVFEKL 280
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/520 (22%), Positives = 239/520 (45%), Gaps = 29/520 (5%)
Query: 17 LYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEI-- 74
L + +S++ +Y + GL A LF R+L +WN ++ F + G + L+ E+
Sbjct: 429 LEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS 488
Query: 75 KLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGC 134
+ + + + ++ C + G +H + K+G L +
Sbjct: 489 EYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG----------DLTSAFLRLET 538
Query: 135 LSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK-KPSIRSFVGFLN 193
+SE + D+ SWNS++S A +G L++L M GK + + + +G ++
Sbjct: 539 MSETR---------DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTIS 589
Query: 194 LSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE 253
S G L G H IK +Q+ LI MYG+C DI++AV + + +L
Sbjct: 590 ASGNLGLVLQGRCFHGLAIK-SLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLC 648
Query: 254 CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHC 313
N ++++L +VF++F + E +E+TF HC
Sbjct: 649 SWNCVISALSQNKAGREVFQLFRNLKLEP---NEITF--VGLLSASTQLGSTSYGMQAHC 703
Query: 314 CAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQ 373
I+ G++++ VS +L+D Y G + KVF + ++ + S+I+ ++G+G++
Sbjct: 704 HLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEK 763
Query: 374 CLEMLEAMIRKG-LKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCM 432
+E+ + + ++P++ +F+ +L+ CSHSG ++EG + ME G+ P +H +
Sbjct: 764 AMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWI 823
Query: 433 VXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDF 492
V +W +LL +C H + +G+ A++L ++P++
Sbjct: 824 VDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNA 883
Query: 493 AVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ ++ ++N Y G +E +++++++ + K G+S+I
Sbjct: 884 SYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVI 923
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 189/414 (45%), Gaps = 32/414 (7%)
Query: 3 SVHCRAIKLGFG--FNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE 60
S+H IK G+ ++ +G+S++ +Y + G + A +F+EL R++ + N +L GF
Sbjct: 310 SLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAA 369
Query: 61 LGLFDELLGLYNEIK-LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNI 119
G+F+E G+ N+++ +D ++ + + + C + F EG +HG+ +++ +
Sbjct: 370 NGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRAL 429
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL--YIMQ 177
V N+++D Y CG ++A+ F+ D++SWNSM+S ++ NG A L + +
Sbjct: 430 EVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE 489
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
+ K S+ + + L + + +FG +HC + K+ GD+
Sbjct: 490 YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKL--------------------GDL 529
Query: 238 KNAVSTYESLPMT-SLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG-IGLDEVTFSTXXX 295
+A E++ T L NS+++ G + F M EG I D +T
Sbjct: 530 TSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITL--LGT 587
Query: 296 XXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNV 355
H AIK E D + +LI Y R + + KVF I PN+
Sbjct: 588 ISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNL 647
Query: 356 FCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
+ +I+ + N G++ ++ + L+P+ +TF+ +L+ + G G
Sbjct: 648 CSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYG 698
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 189/411 (45%), Gaps = 23/411 (5%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+HC AI+ G + + ++L+ LY + + A +F + R++ +WN ++ G
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWV-DTNIFVA 122
+ L + + E + ++F +I CS+ G LHG VIK G+ + ++ V
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK- 181
N+++ YS CG A+ F+ + DV+S N++L+ +A NG+F +A +L MQ K
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
+P I + V ++ + G +H ++M + ++ V +++IDMYGKCG A
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE 449
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX-X 300
+++ L NS++++ G +F +V E + + ST
Sbjct: 450 LLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTVLAILTSCD 508
Query: 301 XXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS 360
HC KLG L A+LR + + E L + + S
Sbjct: 509 SSDSLIFGKSVHCWLQKLG---------DLTSAFLR------LETMSETRDLTS---WNS 550
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKG-LKPDRVTFLCVLTGCSHSGLVEEGR 410
+I+G A +G + L +AM R+G ++ D +T L ++ + GLV +GR
Sbjct: 551 VISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR 601
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 184/408 (45%), Gaps = 12/408 (2%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
SVHC A+K G +L S L+ Y R G + + LFDEL E+++ WN ++ + G
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWV-DTNIFV 121
+ +GL+ E+ E + + S+ + S LH I+ G V D+++
Sbjct: 168 RYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL-- 225
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
NAL++ Y+ LS A+ F + D++SWN++++ NG +L+ M G+
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFD-NGSVHVQSALIDMYGKCGDIKNA 240
+ +F ++ S G +H VIK G+ V V +++I MY KCGD + A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLM--VDEGIGLDEVTFSTXXXXXX 298
+ +E L + N+++ G+ ++ F + M VD+ I D T +
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDK-IQPDIATVVS--ITSI 402
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESD-VSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC 357
H +++ +S + V S+ID Y + G ++ +F+ ++
Sbjct: 403 CGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVS 462
Query: 358 FTSIINGFAWNGLGKQCLEMLEAMIRKG--LKPDRVTFLCVLTGCSHS 403
+ S+I+ F+ NG + + + ++ + K T L +LT C S
Sbjct: 463 WNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 120/238 (50%), Gaps = 7/238 (2%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLF 64
H AIK + + ++L+ +Y R I+ A+K+F + + NL +WN V+ +
Sbjct: 604 HGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAG 663
Query: 65 DELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANA 124
E+ L+ +KL E N ++F L+ + G Q H H+I+ G+ N FV+ A
Sbjct: 664 REVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGF-QANPFVSAA 719
Query: 125 LVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK-KP 183
LVD YS+CG L K F+ + + +WNS++S + +G+ A+EL + + +P
Sbjct: 720 LVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCV-IKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+ SF+ L+ S +G G+ + + K G + H + ++DM G+ G ++ A
Sbjct: 780 NKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEH-RVWIVDMLGRAGKLREA 836
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 136/311 (43%), Gaps = 7/311 (2%)
Query: 105 LHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNG 164
+H +K G + ++ ++ L+ FY G L + F + +DV+ WNSM++ NG
Sbjct: 109 VHCFALKCGLLQ-DLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 165 LFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQ 224
++ A+ L M G + + + + S + +HC I+ G G +
Sbjct: 168 RYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLV-GDSSLC 226
Query: 225 SALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIG 284
+AL+++Y K ++ +A + + + N++MT L G + F M G
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 285 LDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGY--ESDVSVSCSLIDAYLRSGHVLL 342
D VTFS H IK GY E+ VSV S+I Y + G
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESL--HGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEA 344
Query: 343 SQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIR-KGLKPDRVTFLCVLTGCS 401
++ VFE++ +V +I+NGFA NG+ ++ +L M ++PD T + + + C
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG 404
Query: 402 HSGLVEEGRLV 412
EGR V
Sbjct: 405 DLSFSREGRAV 415
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 10/216 (4%)
Query: 207 IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCG 266
+HC +K G + S L+ YG+ G++ ++ ++ L + NS++T+L G
Sbjct: 109 VHCFALKCGLLQ-DLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 267 IVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSV 326
+F M+ +G D T HC AI+ G D S+
Sbjct: 168 RYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSML--HCLAIETGLVGDSSL 225
Query: 327 SCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGL 386
+L++ Y + ++ ++ VF + ++ + +I+ NG ++ L+ ++M G
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 387 KPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
+ D VTF CV++ CS +EE L ESLHG+
Sbjct: 286 EADTVTFSCVISACSS---IEELTL----GESLHGL 314
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 218/489 (44%), Gaps = 19/489 (3%)
Query: 63 LFDELLGLYNEIKLDNV-------------ELNGLSFCYLIRGCSNKRFFDEGSQLHGHV 109
+F + LGL KLD ++ L+ C + + G ++ +
Sbjct: 98 VFTKPLGLSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLI 157
Query: 110 IKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLS---WNSMLSVYADNGLF 166
+ + N + + L+ +S C L A+K F + +L+ W +M Y+ NG
Sbjct: 158 LNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSP 217
Query: 167 LDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSA 226
DAL + M +P S L + G IH ++K V V +
Sbjct: 218 RDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQV-VYNV 276
Query: 227 LIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLD 286
L+ +Y + G +A ++ + ++ NSL++ L V ++F +F M +E IG
Sbjct: 277 LLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFS 336
Query: 287 EVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKV 346
T +T H +K + DV + SL+D Y + G V S++V
Sbjct: 337 WATLTTILPACSRVAALLTGKEI--HAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRV 394
Query: 347 FEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLV 406
F+ + ++ + ++N +A NG ++ + + E MI G+ PD +TF+ +L+GCS +GL
Sbjct: 395 FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLT 454
Query: 407 EEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLR 466
E G +F M++ +SP +H++C+V P + +W SLL
Sbjct: 455 EYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
Query: 467 SCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKE 526
SCR+H N +VG AAK L L+P + ++ VSN Y++ ++ +I+E+ R + KE
Sbjct: 515 SCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKE 574
Query: 527 IGHSLIGLN 535
G S + +
Sbjct: 575 AGCSWVQVK 583
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 122/245 (49%), Gaps = 1/245 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + +K + + + L+ LYM GL D A K+FD + ERN+ TWN ++ +
Sbjct: 258 IHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVR 317
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E+ L+ +++ + + + + ++ CS G ++H ++K ++ + N
Sbjct: 318 VHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSK-EKPDVPLLN 376
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+L+D Y CG + +++ F + +D+ SWN ML+ YA NG + + L M G P
Sbjct: 377 SLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAP 436
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+FV L+ S TG +G+ + + + ++ + L+D+ G+ G IK AV
Sbjct: 437 DGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKV 496
Query: 244 YESLP 248
E++P
Sbjct: 497 IETMP 501
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 5/278 (1%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLAT---WNLVLRGFCELGLFDELLGLYN 72
N + S L+ L+ +DLA K+FD++ + +L T W + G+ G + L +Y
Sbjct: 166 NPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYV 225
Query: 73 EIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSAC 132
++ +E S ++ C + + G +H ++K + V N L+ Y
Sbjct: 226 DMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRK-EKVDQVVYNVLLKLYMES 284
Query: 133 GCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFL 192
G +A+K F + +V++WNS++SV + + L MQ S + L
Sbjct: 285 GLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTIL 344
Query: 193 NLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSL 252
S+ L G +IH ++K + V + ++L+DMYGKCG+++ + ++ + L
Sbjct: 345 PACSRVAALLTGKEIHAQILK-SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDL 403
Query: 253 ECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
N ++ G +++V +F M++ G+ D +TF
Sbjct: 404 ASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITF 441
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 188/391 (48%), Gaps = 9/391 (2%)
Query: 152 SWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCV 211
+WN + Y+ + ++++ + M+ G KP+ +F L + G QI V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 212 IKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDV 271
+K GFD V+V + LI +YG C +A ++ + ++ NS+MT+L+ G ++ V
Sbjct: 140 LKHGFD-FDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 272 FEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLI 331
FE F M+ + DE T H + E + + +L+
Sbjct: 199 FECFCEMIGKRFCPDETTM----VVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 332 DAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKG-LKPDR 390
D Y +SG + ++ VFE++ NV+ ++++I G A G ++ L++ M+++ ++P+
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNY 314
Query: 391 VTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXX 450
VTFL VL CSH+GLV++G F+ ME +H I P H+ MV
Sbjct: 315 VTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIK 374
Query: 451 QTPGRGDCVMWSSLLRSCRVHRNET---VGRRAAKILLGLDPEDFAVHLQVSNFYSETGE 507
+ P D V+W +LL +C +H +E +G + K L+ L+P+ + V+N ++E
Sbjct: 375 KMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARM 434
Query: 508 FEASMQIKEIAIARKMTKEIGHSLIGLNSCY 538
+ + +++ + KM K G S + L +
Sbjct: 435 WAEAAEVRRVMKETKMKKIAGESCLELGGSF 465
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 126/245 (51%), Gaps = 9/245 (3%)
Query: 49 ATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGH 108
+TWN++ RG+ E + +Y+E+K ++ N L+F +L++ C++ G Q+
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 109 VIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLD 168
V+K G+ D +++V N L+ Y C S+A+K F + +V+SWNS+++ +NG
Sbjct: 139 VLKHGF-DFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENG---- 193
Query: 169 ALELLY--IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSA 226
L L++ + GK+ + LS+ GN G +H V+ + + + +A
Sbjct: 194 KLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELEL-NCRLGTA 252
Query: 227 LIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDE-GIGL 285
L+DMY K G ++ A +E + ++ ++++ L G ++ ++F M+ E +
Sbjct: 253 LVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRP 312
Query: 286 DEVTF 290
+ VTF
Sbjct: 313 NYVTF 317
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+ +K GF F++Y+G++L+ LY A K+FDE+ ERN+ +WN ++ E
Sbjct: 133 RQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVEN 192
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G + + + E+ + + L+ C G +H V+ V ++ N +
Sbjct: 193 GKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGN--LSLGKLVHSQVM-VRELELNCRL 249
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL-YIMQFWG 180
ALVD Y+ G L A+ F+ + ++V +W++M+ A G +AL+L +M+
Sbjct: 250 GTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESS 309
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+P+ +F+G L S TG G + + K+ + A++D+ G+ G + A
Sbjct: 310 VRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEA 369
Query: 241 VSTYESLP 248
+ +P
Sbjct: 370 YDFIKKMP 377
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 83/158 (52%), Gaps = 2/158 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH + + N +G++LV +Y + G ++ A +F+ + ++N+ TW+ ++ G + G
Sbjct: 234 VHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGF 293
Query: 64 FDELLGLYNEI-KLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+E L L++++ K +V N ++F ++ CS+ D+G + + K+ + +
Sbjct: 294 AEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHY 353
Query: 123 NALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLSV 159
A+VD G L+EA + +P E D + W ++LS
Sbjct: 354 GAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 166/338 (49%), Gaps = 8/338 (2%)
Query: 204 GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLL 263
G QIHC V+K G HVQ+ ++ +Y + + +A ++ +P + + LM +
Sbjct: 32 GKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYV 91
Query: 264 HCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGY-ES 322
CG+ + E+F M+ +G+ DE FS H K + ES
Sbjct: 92 RCGLGSEGLEVFREMLVKGLEPDE--FSVTTALTACAQVGALAQGKWIHEFVKKKSWIES 149
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
DV V +L+D Y + G + + +VF+++ NVF + ++I G+A G K+ + LE +
Sbjct: 150 DVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE 209
Query: 383 RK-GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXX 441
R+ G+KPD V L VL C+H G +EEGR + +ME+ + I+P +H+SC+V
Sbjct: 210 REDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGR 269
Query: 442 XXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDP----EDFAVHLQ 497
+ P + +W +LL CR H+N +G A K LL L+ E+ A +Q
Sbjct: 270 LDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQ 329
Query: 498 VSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
+SN Y + +++ + R + K G S++ ++
Sbjct: 330 LSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVD 367
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 128/254 (50%), Gaps = 4/254 (1%)
Query: 2 NSVHCRAIKLG-FGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE 60
+HC +K G F + ++ + ++ +Y+ L+ A K+FDE+P+ ++ W++++ G+
Sbjct: 33 KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVR 92
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
GL E L ++ E+ + +E + S + C+ +G +H V K W+++++F
Sbjct: 93 CGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVF 152
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW- 179
V ALVD Y+ CGC+ A + F+ + +V SW +++ YA G A+ L ++
Sbjct: 153 VGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERED 212
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQ-SALIDMYGKCGDIK 238
G KP +G L + G G + ++ ++ H S ++D+ + G +
Sbjct: 213 GIKPDSVVLLGVLAACAHGGFLEEGRSM-LENMEARYEITPKHEHYSCIVDLMCRAGRLD 271
Query: 239 NAVSTYESLPMTSL 252
+A++ E +PM L
Sbjct: 272 DALNLIEKMPMKPL 285
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%)
Query: 77 DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLS 136
+++ + L+F +LI C FF G Q+H V+K G ++ V ++ Y L
Sbjct: 7 EDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLL 66
Query: 137 EAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS 196
+A+K F IP DV+ W+ +++ Y GL + LE+ M G +P S L +
Sbjct: 67 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 126
Query: 197 KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESL 247
+ G G IH V K + V V +AL+DMY KCG I+ AV ++ L
Sbjct: 127 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 177
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 207/443 (46%), Gaps = 22/443 (4%)
Query: 104 QLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADN 163
Q+H +I +G + + + + L+ S+ CLS A + IP V +N+++S N
Sbjct: 27 QIHAQIITIG-LSHHTYPLSKLLHL-SSTVCLSYALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 164 GLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF------------GMQIHCCV 211
++ + + + S RS F+ + T +LF G +H V
Sbjct: 85 H---NSTQTHLAFSLYDQILSSRS--NFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHV 139
Query: 212 IK-MGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDD 270
+K + N VQ+AL+ Y CG ++ A S +E + L N+L+ + + +D
Sbjct: 140 LKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDS 199
Query: 271 VFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSL 330
E+ L + + +E+ S H +K + V SL
Sbjct: 200 DEEVLLLFMRMQVRPNEL--SLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSL 257
Query: 331 IDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDR 390
ID Y + G + ++KVF+++ +V C+ ++I G A +G G++ +E+ +++I +GL PD
Sbjct: 258 IDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDS 317
Query: 391 VTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXX 450
TF+ ++ CSHSGLV+EG +FNSM++++GI P +H+ C+V
Sbjct: 318 ATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIK 377
Query: 451 QTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEA 510
+ P + + +W S L S + H + G A K LLGL+ E+ ++ +SN Y+ +
Sbjct: 378 KMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTD 437
Query: 511 SMQIKEIAIARKMTKEIGHSLIG 533
+ +E+ ++ K G S +
Sbjct: 438 VEKTRELMKDHRVNKSPGISTLN 460
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 118/235 (50%), Gaps = 7/235 (2%)
Query: 18 YIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFC---ELGLFDELLGLYNEI 74
++ ++LVG Y G + A LF+ + E +LATWN +L + E+ +E+L L+ +
Sbjct: 151 FVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM 210
Query: 75 KLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGC 134
+ V N LS LI+ C+N F G H +V+K + N FV +L+D YS CGC
Sbjct: 211 Q---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNN-LTLNQFVGTSLIDLYSKCGC 266
Query: 135 LSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL 194
LS A+K F + DV +N+M+ A +G + +EL + G P +FV ++
Sbjct: 267 LSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISA 326
Query: 195 SSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
S +G G+QI + + V L+D+ G+ G ++ A + +P+
Sbjct: 327 CSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPV 381
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
H +K N ++G+SL+ LY + G + A K+FDE+ +R+++ +N ++RG G
Sbjct: 238 AHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGF 297
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E + LY + + + +F I CS+ DEG Q+ + V ++ +
Sbjct: 298 GQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYG 357
Query: 124 ALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLSVYADNGLF 166
LVD G L EA++ + +P++ + W S L +G F
Sbjct: 358 CLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDF 401
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/629 (22%), Positives = 250/629 (39%), Gaps = 111/629 (17%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGF------ 58
H R+IK G + LV LY + GL+ A +FDE+ ERN+ +WN V+ +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 59 -----------CELGLFD-------------------ELLGLYNEIKLDNVELNGLSFCY 88
CE L E+ G + + D++ ++ +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
+++ + G QLHG ++K G D F ++L+ YS CG E F +E
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTG-NDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVE 189
Query: 149 ----------------------------------DVLSWNSMLSVYADNGLFLDALELLY 174
D +SWN++++ YA NG +AL++
Sbjct: 190 FVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAV 249
Query: 175 IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
M+ G K SF LN+ S + G ++H V+K G + V S ++D+Y KC
Sbjct: 250 SMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG-SYSNKFVSSGIVDVYCKC 308
Query: 235 GDIKNAVST-------------------------------YESLPMTSLECCNSLMTSLL 263
G++K A S ++SL +L ++ L
Sbjct: 309 GNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL 368
Query: 264 HCGIVDDVFEMF-GLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYES 322
+ D V E+ + +E D + + H +++ G
Sbjct: 369 NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGH--SLRTGILM 426
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
D + + +D Y + G+V ++++F+ + + ++I G A +G + + E M
Sbjct: 427 DKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT 486
Query: 383 RKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXX 442
G KPD +TF+ +L+ C H GLV EG F SM + ISP+ H++CM+
Sbjct: 487 EGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRL 546
Query: 443 XXXXXXXXQTPG-RGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNF 501
D V+ + L +C ++N + + + LL ++ + + ++Q++N
Sbjct: 547 DKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANA 606
Query: 502 YSETGEFEASMQIKEIAIARKMTK--EIG 528
Y+ + + + I +I +T+ EIG
Sbjct: 607 YASSA--RSKLDITDIDTVFMLTEALEIG 633
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 3/248 (1%)
Query: 2 NSVHCRAIKLGFGF-NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE 60
N + + L +GF NLY SS++ Y G + A +LFD L E+NL W + G+
Sbjct: 310 NMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLN 369
Query: 61 LGLFDELLGLYNE-IKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNI 119
L D +L L I + + L ++ CS + + + G ++HGH ++ G +
Sbjct: 370 LRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKK 429
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
V A VD YS CG + A++ F + D + +N+M++ A +G + + M
Sbjct: 430 LVT-AFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG 488
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
G KP +F+ L+ G L G + +I+ + + +ID+YGK +
Sbjct: 489 GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDK 548
Query: 240 AVSTYESL 247
A+ E +
Sbjct: 549 AIELMEGI 556
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/512 (24%), Positives = 227/512 (44%), Gaps = 55/512 (10%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+HC A K G + + +SL+ Y + G +A ++F + ++ +WN ++ +
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKS 294
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
+ L L+ + N ++ ++ S + G Q+HG +IK G +T I +
Sbjct: 295 ENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG-CETGIVL 353
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADN------GLFLDALELLYI 175
NAL+DFY+ CG L +++ F I ++++ WN++LS YA+ LFL L++
Sbjct: 354 GNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQM--- 410
Query: 176 MQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCG 235
G +P+ +F L K+ Q+H +++MG+++ +V S+L+ Y K
Sbjct: 411 ----GFRPTEYTFSTAL----KSCCVTELQQLHSVIVRMGYEDND-YVLSSLMRSYAKNQ 461
Query: 236 DIKNAV--------------------------STYESLPMTS-LECCNSLM--TSLLHCG 266
+ +A+ +ES+ + S LE +++ ++ C
Sbjct: 462 LMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACS 521
Query: 267 IVD---DVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYE-S 322
D +V E+F M+ I D+ TF + H K + +
Sbjct: 522 RSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI--HGLITKTDFSCA 579
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
D V LID Y + G + KVFE+ N+ +T++I+ +G G++ LE + +
Sbjct: 580 DTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETL 639
Query: 383 RKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXX 442
G KPDRV+F+ +LT C H G+V+EG +F M+ +G+ P+ DH+ C V
Sbjct: 640 SLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYL 698
Query: 443 XXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNE 474
+ P D +W + L C E
Sbjct: 699 KEAEHLIREMPFPADAPVWRTFLDGCNRFAEE 730
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 183/389 (47%), Gaps = 16/389 (4%)
Query: 17 LYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKL 76
+Y+ ++++ LY +LG + LA K+FD++PERN ++N +++G+ + G D+ G+++E++
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 77 -----DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSA 131
+ ++GL C + G+QLHG +K G + FV L+ Y
Sbjct: 109 FGYLPNQSTVSGLLSCASLD-------VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGR 161
Query: 132 CGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGF 191
L A++ F+ +P + + +WN M+S+ G + + + G + SF+G
Sbjct: 162 LDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGV 221
Query: 192 LNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
L S + Q+HC K G D + V ++LI YGKCG+ A ++
Sbjct: 222 LKGVSCVKDLDISKQLHCSATKKGLD-CEISVVNSLISAYGKCGNTHMAERMFQDAGSWD 280
Query: 252 LECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXX 311
+ N+++ + ++F M + G ++ T+ +
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVS--VLGVSSLVQLLSCGRQI 338
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLG 371
H IK G E+ + + +LID Y + G++ S+ F+ I N+ C+ ++++G+A N G
Sbjct: 339 HGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDG 397
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGC 400
CL + M++ G +P TF L C
Sbjct: 398 PICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 211/464 (45%), Gaps = 52/464 (11%)
Query: 2 NSVHCRAIKLG-FGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE 60
+H ++K G F + ++G+ L+ LY RL L+++A ++F+++P ++L TWN ++
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH 192
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
G E + + E+ L SF +++G S + D QLH K G +D I
Sbjct: 193 RGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKG-LDCEIS 251
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
V N+L+ Y CG A++ FQ D++SWN+++ A + L AL+L M G
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
P+ ++V L +SS G QIH +IK G + G V + +ALID Y KCG+++++
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV-LGNALIDFYAKCGNLEDS 370
Query: 241 VSTYESLPMTSLECCNSLMTSLLHC-GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
++ + ++ C N+L++ + G + +F M+ G E TFST
Sbjct: 371 RLCFDYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFST------A 422
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYL------------------------ 335
H +++GYE + V SL+ +Y
Sbjct: 423 LKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPL 482
Query: 336 --------RSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLK 387
R G S K+ + P+ + I + + ++ +E+ + M++ ++
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIR 542
Query: 388 PDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSC 431
PD+ TF+ +L+ CS + G S+HG+ D FSC
Sbjct: 543 PDKYTFVSILSLCSKLCDLTLG-------SSIHGLITKTD-FSC 578
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 230/536 (42%), Gaps = 63/536 (11%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
N+ +S+V Y R G + A +LF E+PERN+ +W ++ GF L+ E L L+ E+K
Sbjct: 230 NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMK 289
Query: 76 --LDNVELNGLSFCYLIRGCSN--KRFFDEGSQLHGHVIKVGW--VDTNIFVANALVDFY 129
+D V NG + L C F G QLH VI GW VD + +A +LV Y
Sbjct: 290 KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Query: 130 SACGCLSEAK----KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSI 185
++ G ++ A+ +SF D+ S N +++ Y NG L+ E L+ + S+
Sbjct: 350 ASSGLIASAQSLLNESF------DLQSCNIIINRYLKNG-DLERAETLF-----ERVKSL 397
Query: 186 RSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYE 245
V + +++ID Y + GD+ A ++
Sbjct: 398 HDKVSW---------------------------------TSMIDGYLEAGDVSRAFGLFQ 424
Query: 246 SLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXX 305
L +++ L+ + + + MV G+ T+S
Sbjct: 425 KLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 306 XXXXXXHCCAIKLG--YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIIN 363
HC K Y+ D+ + SL+ Y + G + + ++F ++ + + S+I
Sbjct: 485 GKHI--HCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIM 542
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
G + +GL + L + + M+ G KP+ VTFL VL+ CSHSGL+ G +F +M+ + I
Sbjct: 543 GLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQ 602
Query: 424 PDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSC----RVHRNETVGRR 479
P DH+ M+ P D ++ +LL C R E + R
Sbjct: 603 PGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAER 662
Query: 480 AAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
AA LL LDP + H+ + N Y+ G + ++++ + + K G S + +N
Sbjct: 663 AAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVN 718
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 167/382 (43%), Gaps = 59/382 (15%)
Query: 36 ALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSN 95
A++LFDE+PERN+ +WN ++ G G ++ +++ + +V +S+ +I+G
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIE 212
Query: 96 KRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNS 155
+E L G + + N+ ++V Y G + EA + F +P +++SW +
Sbjct: 213 NDGMEEAKLLFGDM-----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTA 267
Query: 156 MLSVYADNGLFLDALELLYIMQ--FWGKKPSIRSFVGFLNLSSKTGNAL--FGMQIHCCV 211
M+S +A N L+ +AL L M+ P+ + + G G Q+H V
Sbjct: 268 MISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQV 327
Query: 212 IKMGFD--NGSVHVQSALIDMYGKCGDIKNAVSTY-ESLPMTSLECCNSLMTSLLHCGIV 268
I G++ + + +L+ MY G I +A S ES L+ CN ++ L G +
Sbjct: 328 ISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF---DLQSCNIIINRYLKNGDL 384
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
+ +F + D+V+++
Sbjct: 385 ERAETLFERVKSLH---DKVSWT------------------------------------- 404
Query: 329 SLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKP 388
S+ID YL +G V + +F+++ + +T +I+G N L + +L M+R GLKP
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 389 DRVTFLCVLTGCSHSGLVEEGR 410
T+ +L+ + +++G+
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGK 486
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
+SL+ Y + G +D A LF+ +PERN+ T N +L G+ + +E L+ E+ + V
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS 140
Query: 81 LNGL--SFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA 138
+ + C R FDE + N+ N LV G + +A
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMPE------------RNVVSWNTLVTGLIRNGDMEKA 188
Query: 139 KKSFQAIPMEDVLSWNSMLSVYADN 163
K+ F A+P DV+SWN+M+ Y +N
Sbjct: 189 KQVFDAMPSRDVVSWNAMIKGYIEN 213
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 4 VHCRAIKLG--FGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+HC K + +L + +SLV +Y + G I+ A ++F ++ +++ +WN ++ G
Sbjct: 488 IHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHH 547
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
GL D+ L L+ E+ + N ++F ++ CS+ G +L + + + I
Sbjct: 548 GLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDH 607
Query: 122 ANALVDFYSACGCLSEAKKSFQAIP 146
+++D G L EA++ A+P
Sbjct: 608 YISMIDLLGRAGKLKEAEEFISALP 632
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 172/363 (47%), Gaps = 34/363 (9%)
Query: 204 GMQIHCCVIKMGFDNGSVHVQSALIDMYG------------------------------- 232
G+Q+H I+ GFDN HVQ+ LI +Y
Sbjct: 127 GLQVHGMTIRRGFDNDP-HVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACA 185
Query: 233 KCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFST 292
+CGD+ A +E +P N++++ G + +F LM EG+ ++ V +
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 293 XXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL 352
+ K+ + V ++ +L+D Y + G + + +VF +
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKI--KITVRLATTLVDLYAKCGDMEKAMEVFWGMEE 303
Query: 353 PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
NV+ ++S +NG A NG G++CLE+ M + G+ P+ VTF+ VL GCS G V+EG+
Sbjct: 304 KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRH 363
Query: 413 FNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHR 472
F+SM + GI P +H+ C+V Q P + +WSSLL + R+++
Sbjct: 364 FDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYK 423
Query: 473 NETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
N +G A+K +L L+ + ++ +SN Y+++ +++ +++ ++ + K+ G S++
Sbjct: 424 NLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVM 483
Query: 533 GLN 535
+N
Sbjct: 484 EVN 486
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 37/295 (12%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLID---------------------------- 34
VH I+ GF + ++ + L+ LY LG +D
Sbjct: 129 QVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCG 188
Query: 35 ---LALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR 91
A KLF+ +PER+ WN ++ G+ ++G E L +++ ++L+ V++NG++ ++
Sbjct: 189 DVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 92 GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVL 151
C+ D+G H + I+ + + +A LVD Y+ CG + +A + F + ++V
Sbjct: 249 ACTQLGALDQGRWAHSY-IERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 152 SWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCV 211
+W+S L+ A NG LEL +M+ G P+ +FV L S G G Q H
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDS 366
Query: 212 IKMGFD-NGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
++ F + L+D+Y + G +++AVS + +PM ++ +SLLH
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHA---AVWSSLLHA 418
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 164/373 (43%), Gaps = 51/373 (13%)
Query: 33 IDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLY-------NEIKLDNVELNGLS 85
+D A ++ D + L N ++R C+ + ++ Y N++K DN +N
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVN--- 112
Query: 86 FCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSE-------- 137
+L++ C+ R + G Q+HG I+ G+ D + V L+ Y+ GCL
Sbjct: 113 --FLVQACTGLRMRETGLQVHGMTIRRGF-DNDPHVQTGLISLYAELGCLDSCHKVFNSI 169
Query: 138 -----------------------AKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLY 174
A+K F+ +P D ++WN+M+S YA G +AL + +
Sbjct: 170 PCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFH 229
Query: 175 IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
+MQ G K + + + L+ ++ G G H + + +V + + L+D+Y KC
Sbjct: 230 LMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKI-KITVRLATTLVDLYAKC 288
Query: 235 GDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXX 294
GD++ A+ + + ++ +S + L G + E+F LM +G+ + VTF +
Sbjct: 289 GDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVS-- 346
Query: 295 XXXXXXXXXXXXXXXXXHCCAIK--LGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL 352
H +++ G E + L+D Y R+G + + + +Q+P+
Sbjct: 347 -VLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPM 405
Query: 353 -PNVFCFTSIING 364
P+ ++S+++
Sbjct: 406 KPHAAVWSSLLHA 418
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 78/213 (36%), Gaps = 33/213 (15%)
Query: 236 DIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXX 295
D N + P +L NS++ + + + F+ + ++ G L ++
Sbjct: 57 DYANQILDRSEKP--TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 296 XXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNV 355
H I+ G+++D V LI Y G + KVF IP P+
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 356 FCFTSIING----------------------FAWN---------GLGKQCLEMLEAMIRK 384
C T+++ AWN G ++ L + M +
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSME 417
G+K + V + VL+ C+ G +++GR + +E
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIE 267
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 159/336 (47%), Gaps = 6/336 (1%)
Query: 199 GNALFGMQIHCCVIKMGFDNGS-VHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNS 257
+ G IH VI+ GF GS ++VQ++L+ +Y CGD+ +A ++ +P L NS
Sbjct: 2 ADVRLGETIHSVVIRSGF--GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 59
Query: 258 LMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIK 317
++ G ++ ++ M +GI D F+ H IK
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPD--GFTIVSLLSACAKIGALTLGKRVHVYMIK 117
Query: 318 LGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEM 377
+G ++ S L+D Y R G V ++ +F+++ N +TS+I G A NG GK+ +E+
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 378 LEAM-IRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXX 436
+ M +GL P +TF+ +L CSH G+V+EG F M + I P +HF CMV
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 437 XXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHL 496
P + + V+W +LL +C VH + + A +L L+P ++
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 297
Query: 497 QVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+SN Y+ + +I++ + + K GHSL+
Sbjct: 298 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV 333
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 24/259 (9%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
++H I+ GFG +Y+ +SL+ LY G + A K+FD++PE++L WN V+ GF E G
Sbjct: 9 TIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENG 68
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+E L LY E+ ++ +G + L+ C+ G ++H ++IKVG + N+ +
Sbjct: 69 KPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG-LTRNLHSS 127
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL-YIMQFWGK 181
N L+D Y+ CG + EAK F + ++ +SW S++ A NG +A+EL Y+ G
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFD-----------NGSVHVQSALIDM 230
P +FVG L S HC ++K GF+ + ++D+
Sbjct: 188 LPCEITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 236
Query: 231 YGKCGDIKNAVSTYESLPM 249
+ G +K A +S+PM
Sbjct: 237 LARAGQVKKAYEYIKSMPM 255
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH IK+G NL+ + L+ LY R G ++ A LFDE+ ++N +W ++ G G
Sbjct: 111 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGF 170
Query: 64 FDELLGLYNEIKLDNVELN-GLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
E + L+ ++ L ++F ++ CS+ EG + + + ++ I
Sbjct: 171 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF 230
Query: 123 NALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSML---SVYADNGL 165
+VD + G + +A + +++PM+ +V+ W ++L +V+ D+ L
Sbjct: 231 GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDL 277
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 211/483 (43%), Gaps = 49/483 (10%)
Query: 90 IRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSAC------GCLSEAKKSFQ 143
++ CS + +E Q+H ++K G + + A+ F S C L A+ F
Sbjct: 21 LQRCSKQ---EELKQIHARMLKTGLMQDSY----AITKFLSFCISSTSSDFLPYAQIVFD 73
Query: 144 AIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP-SIRSFVGFLNLSSKTGNAL 202
D WN M+ ++ + +L LLY P + +F L S
Sbjct: 74 GFDRPDTFLWNLMIRGFSCSDEPERSL-LLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 203 FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSL 262
QIH + K+G++N V+ ++LI+ Y G+ K A ++ +P NS++
Sbjct: 133 ETTQIHAQITKLGYEN-DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 191
Query: 263 LHCGIVD-------------------------------DVFEMFGLMVDEGIGLDEVTFS 291
+ G +D + ++F M + + D V+ +
Sbjct: 192 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 251
Query: 292 TXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP 351
H K D + C LID Y + G + + +VF+ I
Sbjct: 252 NALSACAQLGALEQGKWI--HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 352 LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRL 411
+V +T++I+G+A++G G++ + M + G+KP+ +TF VLT CS++GLVEEG+L
Sbjct: 310 KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 412 VFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVH 471
+F SME + + P +H+ C+V + P + + V+W +LL++CR+H
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Query: 472 RNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSL 531
+N +G +IL+ +DP ++ +N ++ +++ + + + + + + K G S
Sbjct: 430 KNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCST 489
Query: 532 IGL 534
I L
Sbjct: 490 ISL 492
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 139/325 (42%), Gaps = 36/325 (11%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDL---ALKLFDELPERNLATWNLVLRGF 58
+H R +K G + Y + + + D A +FD + WNL++RGF
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 59 CELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
+ L LY + + N +F L++ CSN F+E +Q+H + K+G+ + +
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGY-END 149
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNS----------------------- 155
++ N+L++ Y+ G A F IP D +SWNS
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 156 --------MLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQI 207
M+S Y + +AL+L + MQ +P S L+ ++ G G I
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 208 HCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGI 267
H + K SV + LIDMY KCG+++ A+ ++++ S++ +L++ + G
Sbjct: 270 HSYLNKTRIRMDSV-LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328
Query: 268 VDDVFEMFGLMVDEGIGLDEVTFST 292
+ F M GI + +TF+
Sbjct: 329 GREAISKFMEMQKMGIKPNVITFTA 353
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 117/229 (51%), Gaps = 1/229 (0%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
+S++ Y++ G +D+AL LF ++ E+N +W ++ G+ + + E L L++E++ +VE
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 81 LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKK 140
+ +S + C+ ++G +H ++ K + + + L+D Y+ CG + EA +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTR-IRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 141 SFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGN 200
F+ I + V +W +++S YA +G +A+ MQ G KP++ +F L S TG
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 201 ALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
G I + + ++ ++D+ G+ G + A + +P+
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPL 412
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H K + +G L+ +Y + G ++ AL++F + ++++ W ++ G+ G
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E + + E++ ++ N ++F ++ CS +EG + + + + I
Sbjct: 329 GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYG 388
Query: 124 ALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLSV 159
+VD G L EAK+ Q +P++ + + W ++L
Sbjct: 389 CIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 204/464 (43%), Gaps = 41/464 (8%)
Query: 104 QLHGHVIKVGWVDTNIFVANALVDFYSACGCLSE---AKKSFQAIPMEDVLSWNSMLSVY 160
++H H+++ +N+ +A+ F S CG LS A + F I +VL +N+M+ Y
Sbjct: 22 EIHAHLLRHFLHGSNLLLAH----FISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCY 77
Query: 161 ADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGF---- 216
+ G L++L M+ G ++ L S + FG +H +I+ GF
Sbjct: 78 SLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLG 137
Query: 217 --------------------------DNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMT 250
+V V + +I + GD++ + ++ +
Sbjct: 138 KIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSER 197
Query: 251 SLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXX 310
S+ NS+++SL CG + E+F M+D+G DE T T
Sbjct: 198 SIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWI- 256
Query: 311 XHCCAIKLGYESD-VSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNG 369
H A G D ++V +L+D Y +SG + + +F ++ NV + ++I+G A NG
Sbjct: 257 -HSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNG 315
Query: 370 LGKQCLEMLEAMIRKG-LKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDH 428
G+ +++ +AMI +G + P+ TFL VL CS++G VE G +F M + +H
Sbjct: 316 KGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEH 375
Query: 429 FSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLD 488
+ MV P + MW SLL +CR H + + AA L+ ++
Sbjct: 376 YGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIE 435
Query: 489 PEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
P + ++ +SN Y+E G ++ +++ + ++ K G S I
Sbjct: 436 PGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 32/280 (11%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH I+ GF I +V LY G + A K+FDE+ ERN+ WNL++RGFC+ G
Sbjct: 124 VHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGD 183
Query: 64 FDELLGLYNEIKLD-----NVELNGLS-----------FCYLIRG--------------- 92
+ L L+ ++ N ++ LS FC +I
Sbjct: 184 VERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPI 243
Query: 93 CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLS 152
++ D G +H G I V NALVDFY G L A F+ + +V+S
Sbjct: 244 SASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVS 303
Query: 153 WNSMLSVYADNGLFLDALELLYIMQFWGK-KPSIRSFVGFLNLSSKTGNALFGMQIHCCV 211
WN+++S A NG ++L M GK P+ +F+G L S TG G ++ +
Sbjct: 304 WNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLM 363
Query: 212 IKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
++ A++D+ + G I A +++P+ +
Sbjct: 364 MERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNA 403
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 123/288 (42%), Gaps = 31/288 (10%)
Query: 34 DLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGC 93
D A ++F + N+ +N +++ + +G E L ++ +K + + ++ L++ C
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 94 SNKRFFDEGSQLHGHVIKVGW------------------------------VDTNIFVAN 123
S+ G +HG +I+ G+ + N+ V N
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
++ + G + F+ + ++SWNSM+S + G +ALEL M G P
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ V L +S+ G G IH G + V +AL+D Y K GD++ A +
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG-IGLDEVTF 290
+ + ++ N+L++ G + ++F M++EG + +E TF
Sbjct: 293 FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATF 340
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 208/479 (43%), Gaps = 32/479 (6%)
Query: 88 YLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPM 147
Y I + +E +++ +I G + + F+ +VDF + A + F +
Sbjct: 12 YFIPFLQRVKSRNEWKKINASIIIHG-LSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSN 70
Query: 148 EDVLSWNSMLSVYADNGLFLDALELL-YIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQ 206
+V +NS++ Y N L+ D + + +++ + P +F + G+ G Q
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 207 IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCG 266
+H + K G V ++ALIDMY K D+ +A ++ + + NSL++ G
Sbjct: 131 VHGHLCKFG-PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLG 189
Query: 267 IVDDVFEMFGLMVDEGI-----------------------------GLDEVTFSTXXXXX 297
+ +F LM+D+ I G++ S
Sbjct: 190 QMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLP 249
Query: 298 XXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC 357
H A + G+ V +LI+ Y + G + + ++F Q+ +V
Sbjct: 250 SCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVIS 309
Query: 358 FTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSME 417
++++I+G+A++G +E M R +KP+ +TFL +L+ CSH G+ +EG F+ M
Sbjct: 310 WSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMR 369
Query: 418 SLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVG 477
+ I P +H+ C++ P + D +W SLL SCR N V
Sbjct: 370 QDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVA 429
Query: 478 RRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
A L+ L+PED ++ ++N Y++ G++E +++++ M K G SLI +N+
Sbjct: 430 LVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNN 488
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 32/279 (11%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH K G F++ ++L+ +YM+ + A K+FDE+ ER++ +WN +L G+ L
Sbjct: 129 KQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARL 188
Query: 62 GLFDELLGLYN-------------------------------EIKLDNVELNGLSFCYLI 90
G + GL++ E++L +E + +S ++
Sbjct: 189 GQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248
Query: 91 RGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDV 150
C+ + G +H + + G++ V NAL++ YS CG +S+A + F + +DV
Sbjct: 249 PSCAQLGSLELGKWIHLYAERRGFL-KQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 307
Query: 151 LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCC 210
+SW++M+S YA +G A+E MQ KP+ +F+G L+ S G G++
Sbjct: 308 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDM 367
Query: 211 VIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
+ + + LID+ + G ++ AV +++PM
Sbjct: 368 MRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM 406
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 34/290 (11%)
Query: 33 IDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVEL-NGLSFCYLIR 91
+D A +LF+++ N+ +N ++R + L+ +++ +Y ++ + EL + +F ++ +
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 92 GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVL 151
C++ G Q+HGH+ K G ++ NAL+D Y L +A K F + DV+
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFG-PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI 176
Query: 152 SWNSMLSVYAD-------NGLF------------------------LDALELLYIMQFWG 180
SWNS+LS YA GLF ++A++ MQ G
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+P S + L ++ G+ G IH + GF V +ALI+MY KCG I A
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLK-QTGVCNALIEMYSKCGVISQA 295
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ + + + +++++ + G E F M + + +TF
Sbjct: 296 IQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITF 345
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H A + GF + ++L+ +Y + G+I A++LF ++ +++ +W+ ++ G+ G
Sbjct: 263 IHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGN 322
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ +NE++ V+ NG++F L+ CS+ + EG + + + ++ I
Sbjct: 323 AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYG 382
Query: 124 ALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLS 158
L+D + G L A + + +PM+ D W S+LS
Sbjct: 383 CLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 219/508 (43%), Gaps = 59/508 (11%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
N+ +++V YM+ G++ A LF +PERN +W ++ G + G D+ LY+ +
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP 168
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
+ +V ++ +I G + DE + + + N+ ++ Y +
Sbjct: 169 VKDV----VASTNMIGGLCREGRVDEARLIFDEM-----RERNVVTWTTMITGYRQNNRV 219
Query: 136 SEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLS 195
A+K F+ +P + +SW SML Y +G DA E +M KP I
Sbjct: 220 DVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM---KPVI---------- 266
Query: 196 SKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC 255
C +A+I +G+ G+I A ++ +
Sbjct: 267 -------------AC--------------NAMIVGFGEVGEISKARRVFDLMEDRDNATW 299
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX-XXXXXXXXXXXXHCC 314
++ + G + ++F M +G+ +F + H
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGV---RPSFPSLISILSVCATLASLQYGRQVHAH 356
Query: 315 AIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQC 374
++ ++ DV V+ L+ Y++ G ++ ++ VF++ ++ + SII+G+A +GLG++
Sbjct: 357 LVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEA 416
Query: 375 LEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVX 434
L++ M G P++VT + +LT CS++G +EEG +F SMES ++P +H+SC V
Sbjct: 417 LKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVD 476
Query: 435 XXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAV 494
+ D +W +LL +C+ H + AAK L +P++
Sbjct: 477 MLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGT 536
Query: 495 HLQVSNFYSETGEFEASMQIKEIAIARK 522
++ +S+ + ++ ++A+ RK
Sbjct: 537 YVLLSSINASRSKW------GDVAVVRK 558
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VH ++ F ++Y+ S L+ +Y++ G + A +FD +++ WN ++ G+
Sbjct: 351 RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASH 410
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
GL +E L +++E+ N ++ ++ CS +EG ++ + V +
Sbjct: 411 GLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSML 157
+ VD G + +A + +++ ++ D W ++L
Sbjct: 471 YSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 185/420 (44%), Gaps = 44/420 (10%)
Query: 115 VDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLY 174
V+ N+ + ++++ Y L A++ F P D++ WN+M+S Y + G L+A L
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFD 114
Query: 175 IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
Q+ C V + +++ Y
Sbjct: 115 -------------------------------QMPC---------RDVMSWNTVLEGYANI 134
Query: 235 GDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG-IGLDEVTFSTX 293
GD++ ++ +P ++ N L+ G V +V F MVDEG + ++ T +
Sbjct: 135 GDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMT-- 192
Query: 294 XXXXXXXXXXXXXXXXXXHCCAIKLGYES-DVSVSCSLIDAYLRSGHVLLSQKVFEQIPL 352
H LGY DV+V +LID Y + G + ++ +VF+ I
Sbjct: 193 LVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR 252
Query: 353 PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
++ + ++ING A +G G + L + M G+ PD+VTF+ VL C H GLVE+G
Sbjct: 253 RDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAY 312
Query: 413 FNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHR 472
FNSM + I P+ +H C+V + P + D V+W++LL + +V++
Sbjct: 313 FNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYK 372
Query: 473 NETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
+G A + L+ L+P + A + +SN Y + G F+ + ++K KE G S I
Sbjct: 373 KVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWI 432
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Query: 27 YMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNE-IKLDNVELNGLS 85
Y +G ++ ++FD++PERN+ +WN +++G+ + G E+LG + + +V N +
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 86 FCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAI 145
++ C+ FD G +H + +G+ ++ V NAL+D Y CG + A + F+ I
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI 250
Query: 146 PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFL 192
D++SWN+M++ A +G +AL L + M+ G P +FVG L
Sbjct: 251 KRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 128/269 (47%), Gaps = 10/269 (3%)
Query: 23 LVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELN 82
L G+ +G+I A K+F E+ E+N+ W ++ G+ L +L+ L + E +
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYL---LNKDLVSARRYFDL-SPERD 89
Query: 83 GLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSF 142
+ + +I G + + G+ L + ++ N +++ Y+ G + ++ F
Sbjct: 90 IVLWNTMISG-----YIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVF 144
Query: 143 QAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK-KPSIRSFVGFLNLSSKTGNA 201
+P +V SWN ++ YA NG + L M G P+ + L+ +K G
Sbjct: 145 DDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 202 LFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTS 261
FG +H +G++ V+V++ALIDMYGKCG I+ A+ ++ + L N+++
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 264
Query: 262 LLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
L G + +F M + GI D+VTF
Sbjct: 265 LAAHGHGTEALNLFHEMKNSGISPDKVTF 293
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 4 VHCRAIKLGFG-FNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
VH LG+ ++ + ++L+ +Y + G I++A+++F + R+L +WN ++ G G
Sbjct: 210 VHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHG 269
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
E L L++E+K + + ++F ++ C + ++G + + I
Sbjct: 270 HGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHC 329
Query: 123 NALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSML---SVYADNGLFLDALELLYIMQF 178
+VD S G L++A + +P++ D + W ++L VY + ALE L
Sbjct: 330 GCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELI---- 385
Query: 179 WGKKPSIRSFVGFLNLSSKTGNA 201
K R+ F+ LS+ G+A
Sbjct: 386 ---KLEPRNPANFVMLSNIYGDA 405
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 184/396 (46%), Gaps = 15/396 (3%)
Query: 151 LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL---SSKTGNALFGMQI 207
L N L Y ++G + AL L + +F + SF + S++ ++L G QI
Sbjct: 29 LKSNHTLKQYLESGEPIKAL-LDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQI 87
Query: 208 HCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP-MTSLECCNSLMTSLLHCG 266
H V K+GF N + +Q++L+ Y GD+ A ++ P ++ +++++
Sbjct: 88 HALVRKLGF-NAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENE 146
Query: 267 IVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSV 326
+ E+F M E I LD V + K D+++
Sbjct: 147 NSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTL 206
Query: 327 SCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAM--IRK 384
SL++ Y++SG ++K+F++ +V +TS+I G+A NG ++ LE+ + M I +
Sbjct: 207 RNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQ 266
Query: 385 G----LKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXX 440
+ P+ VTF+ VL CSHSGLVEEG+ F SM + + P HF CMV
Sbjct: 267 SQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSG 326
Query: 441 XXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSN 500
Q P + + V+W +LL +C +H N +G + + LD + ++ +SN
Sbjct: 327 HLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSN 386
Query: 501 FYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
Y+ G ++ ++++ R+M G S I L S
Sbjct: 387 IYASKGMWDEKSKMRDRVRKRRMP---GKSWIELGS 419
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 10/256 (3%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPER-NLATWNLVLRGFCEL 61
+H KLGF + I +SLVG Y +G +D A ++FDE PE+ N+ W ++ + E
Sbjct: 86 QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTEN 145
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVG-WVDTNIF 120
E + L+ ++ + +EL+G+ + C++ G +++ IK + ++
Sbjct: 146 ENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLT 205
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
+ N+L++ Y G +A+K F +DV ++ SM+ YA NG ++LEL M+
Sbjct: 206 LRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTID 265
Query: 181 KK------PSIRSFVGFLNLSSKTGNALFGMQ-IHCCVIKMGFDNGSVHVQSALIDMYGK 233
+ P+ +F+G L S +G G + ++ H ++D++ +
Sbjct: 266 QSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHF-GCMVDLFCR 324
Query: 234 CGDIKNAVSTYESLPM 249
G +K+A +P+
Sbjct: 325 SGHLKDAHEFINQMPI 340
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 199/433 (45%), Gaps = 9/433 (2%)
Query: 99 FDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLS 158
F ++G + K ++ +NI L++ Y G L A+K F +P + +WN+M++
Sbjct: 10 FPSAVAVYGRMRKKNYMSSNI-----LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIA 64
Query: 159 VYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDN 218
+ L L M G P + + S+ + G QIH IK G +
Sbjct: 65 GLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL 124
Query: 219 GSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLM 278
V V S+L MY + G +++ S+P+ +L N+L+ G + V ++ +M
Sbjct: 125 DLV-VNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 279 VDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSG 338
G +++TF T H AIK+G S V+V SLI Y + G
Sbjct: 184 KISGCRPNKITFVTVLSSCSDLAIRGQGQQI--HAEAIKIGASSVVAVVSSLISMYSKCG 241
Query: 339 HVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK-GLKPDRVTFLCVL 397
+ + K F + + ++S+I+ + ++G G + +E+ M + ++ + V FL +L
Sbjct: 242 CLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLL 301
Query: 398 TGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGD 457
CSHSGL ++G +F+ M +G P H++C+V P + D
Sbjct: 302 YACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTD 361
Query: 458 CVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEI 517
V+W +LL +C +H+N + +R K +L +DP D A ++ ++N ++ + ++++
Sbjct: 362 IVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKS 421
Query: 518 AIARKMTKEIGHS 530
+ + KE G S
Sbjct: 422 MRDKNVKKEAGIS 434
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 131/255 (51%), Gaps = 10/255 (3%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H IK G +L + SSL +YMR G + + +P RNL WN ++ G +
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 170
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G + +L LY +K+ N ++F ++ CS+ +G Q+H IK+G + + V
Sbjct: 171 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG-ASSVVAV 229
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
++L+ YS CGCL +A K+F ED + W+SM+S Y +G +A+EL M +
Sbjct: 230 VSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM---AE 286
Query: 182 KPSIR-SFVGFLNL---SSKTGNALFGMQI-HCCVIKMGFDNGSVHVQSALIDMYGKCGD 236
+ ++ + V FLNL S +G G+++ V K GF G H + ++D+ G+ G
Sbjct: 287 QTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHY-TCVVDLLGRAGC 345
Query: 237 IKNAVSTYESLPMTS 251
+ A + S+P+ +
Sbjct: 346 LDQAEAIIRSMPIKT 360
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 141/275 (51%), Gaps = 4/275 (1%)
Query: 18 YIGSS-LVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKL 76
Y+ S+ L+ Y+R G + A K+FDE+P+R L TWN ++ G + +E L L+ E+
Sbjct: 25 YMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHG 84
Query: 77 DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLS 136
+ + + G + R G Q+HG+ IK G ++ ++ V ++L Y G L
Sbjct: 85 LGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG-LELDLVVNSSLAHMYMRNGKLQ 143
Query: 137 EAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS 196
+ + +++P+ ++++WN+++ A NG L L +M+ G +P+ +FV L+ S
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 197 KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCN 256
G QIH IK+G + V V S+LI MY KCG + +A + +
Sbjct: 204 DLAIRGQGQQIHAEAIKIGA-SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWS 262
Query: 257 SLMTSLLHCGIVDDVFEMFGLMVDE-GIGLDEVTF 290
S++++ G D+ E+F M ++ + ++EV F
Sbjct: 263 SMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 297
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/521 (20%), Positives = 230/521 (44%), Gaps = 52/521 (9%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
N+ +++V Y+R + +A LF E+PERN+ +WN ++ G+ + G D+ L L++E+
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
E N +S+ +++ + DE L + + ++ A+VD + G +
Sbjct: 168 ----ERNIVSWNSMVKALVQRGRIDEAMNLFERMPR-----RDVVSWTAMVDGLAKNGKV 218
Query: 136 SEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLS 195
EA++ F +P +++SWN+M++ YA N +A +L +M P R F +
Sbjct: 219 DEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM------PE-RDFASW---- 267
Query: 196 SKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC 255
+ +I + + ++ A ++ +P ++
Sbjct: 268 -----------------------------NTMITGFIRNREMNKACGLFDRMPEKNVISW 298
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
+++T + ++ +F M+ +G + + H
Sbjct: 299 TTMITGYVENKENEEALNVFSKMLRDG-SVKPNVGTYVSILSACSDLAGLVEGQQIHQLI 357
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQ--IPLPNVFCFTSIINGFAWNGLGKQ 373
K ++ + V+ +L++ Y +SG ++ ++K+F+ + ++ + S+I +A +G GK+
Sbjct: 358 SKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKE 417
Query: 374 CLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
+EM M + G KP VT+L +L CSH+GLVE+G F + + +H++C+V
Sbjct: 418 AIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLV 477
Query: 434 XXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFA 493
R + ++L +C VH ++ + K +L +D
Sbjct: 478 DLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAG 537
Query: 494 VHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGL 534
++ +SN Y+ G+ E + +++ + + K+ G S + +
Sbjct: 538 TYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKV 578
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 215/503 (42%), Gaps = 51/503 (10%)
Query: 76 LDNVELNGLSFCY----LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALV----- 126
+ N+ LN L F + L++ CS+ F + +HG +++ + +++FVA+ L+
Sbjct: 1 MSNIVLNTLRFKHPKLALLQSCSS---FSDLKIIHGFLLRTHLI-SDVFVASRLLALCVD 56
Query: 127 --DFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM---QFWGK 181
F L A F I ++ +N ++ ++ A M + W
Sbjct: 57 DSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIW-- 114
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
P +F + SS+ L G Q H +++ GF N V+V+++L+ MY CG I A
Sbjct: 115 -PDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN-DVYVENSLVHMYANCGFIAAAG 172
Query: 242 STYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGI------------------ 283
+ + + S++ CG+V++ EMF M +
Sbjct: 173 RIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEK 232
Query: 284 GLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLG---YESDVS--------VSCSLID 332
+D F H A++ G YE V + +L+D
Sbjct: 233 AIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVD 292
Query: 333 AYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVT 392
+ R G + + VFE +P + ++SII G A +G + + MI G P VT
Sbjct: 293 MFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVT 352
Query: 393 FLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQT 452
F VL+ CSH GLVE+G ++ +M+ HGI P +H+ C+V +
Sbjct: 353 FTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM 412
Query: 453 PGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASM 512
+ + + +LL +C++++N V R +L+ + PE ++ +SN Y+ G+++
Sbjct: 413 HVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIE 472
Query: 513 QIKEIAIARKMTKEIGHSLIGLN 535
++++ + + K G SLI ++
Sbjct: 473 SLRDMMKEKLVKKPPGWSLIEID 495
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 32 LIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR 91
L+ A +F ++ NL +NL++R F + G Y ++ + + ++F +LI+
Sbjct: 66 LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 92 GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVL 151
S G Q H +++ G+ +++V N+LV Y+ CG ++ A + F + DV+
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGF-QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVV 184
Query: 152 SWNS-------------------------------MLSVYADNGLFLDALELLYIMQFWG 180
SW S M++ YA N F A++L M+ G
Sbjct: 185 SWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+ V ++ + G FG + + V+K + + +AL+DM+ +CGDI+ A
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLI-LGTALVDMFWRCGDIEKA 303
Query: 241 VSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFST 292
+ +E LP T +S++ L G F M+ G +VTF+
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTA 355
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 111/220 (50%), Gaps = 1/220 (0%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
+S+V Y + G+++ A ++FDE+P RNL TW++++ G+ + F++ + L+ +K + V
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 81 LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKK 140
N +I C++ + G + + +V+K + N+ + ALVD + CG + +A
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVK-SHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 141 SFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGN 200
F+ +P D LSW+S++ A +G A+ M G P +F L+ S G
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 201 ALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
G++I+ + K + ++DM G+ G + A
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 68/131 (51%)
Query: 9 IKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELL 68
+K NL +G++LV ++ R G I+ A+ +F+ LPE + +W+ +++G G + +
Sbjct: 276 VKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAM 335
Query: 69 GLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDF 128
++++ ++F ++ CS+ ++G +++ ++ K ++ + +VD
Sbjct: 336 HYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDM 395
Query: 129 YSACGCLSEAK 139
G L+EA+
Sbjct: 396 LGRAGKLAEAE 406
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 179/422 (42%), Gaps = 32/422 (7%)
Query: 148 EDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS--KTGNALFGM 205
E +SW S +++ NG +A + M G +P+ +F+ L+ +G+ G
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
+H K+G D V V +A+I MY K G K A ++ + + N+++ +
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 266 GIVDDVFEMFGLMVDEGI-----------------------------GLDEVTFSTXXXX 296
G VD+ +MF M + + G+ +
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 297 XXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVF 356
H + ++++V VS SLID Y R G V +++VF + V
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 357 CFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
+ S+I GFA NG + L M KG KPD VTF LT CSH GLVEEG F M
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM 333
Query: 417 ESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETV 476
+ + ISP +H+ C+V P + + V+ SLL +C H N V
Sbjct: 334 KCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIV 393
Query: 477 -GRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
R K L L+ + + ++ +SN Y+ G++E + +++ + K+ G S I ++
Sbjct: 394 LAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEID 453
Query: 536 SC 537
C
Sbjct: 454 DC 455
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 125/236 (52%), Gaps = 7/236 (2%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
++++ YMR G +D A K+FD++PER+L +W ++ GF + G +E L + E+++ V+
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 81 LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKK 140
+ ++ + C+N G +H +V+ + N+ V+N+L+D Y CGC+ A++
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDF-KNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 141 SFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTG- 199
F + V+SWNS++ +A NG ++L MQ G KP +F G L S G
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGL 322
Query: 200 --NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE 253
L QI C ++ + + L+D+Y + G +++A+ +S+PM E
Sbjct: 323 VEEGLRYFQIMKCDYRI---SPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNE 375
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 40/278 (14%)
Query: 50 TWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQ----- 104
+W + G E ++++ L VE N ++F L+ GC + F GS+
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGD---FTSGSEALGDL 94
Query: 105 LHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK------------------------- 139
LHG+ K+G ++ V A++ YS G +A+
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 140 ------KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLN 193
K F +P D++SW +M++ + G +AL MQ G KP + + LN
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 194 LSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE 253
+ G FG+ +H V+ F N +V V ++LID+Y +CG ++ A + ++ ++
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKN-NVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 254 CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFS 291
NS++ G + F M ++G D VTF+
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFT 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH + F N+ + +SL+ LY R G ++ A ++F + +R + +WN V+ GF G
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGN 287
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGW-VDTNIFVA 122
E L + +++ + + ++F + CS+ +EG + + ++K + + I
Sbjct: 288 AHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQIMKCDYRISPRIEHY 346
Query: 123 NALVDFYSACGCLSEAKKSFQAIPME 148
LVD YS G L +A K Q++PM+
Sbjct: 347 GCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 178/380 (46%), Gaps = 5/380 (1%)
Query: 153 WNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVI 212
WN+++ Y + LDA+++ M P S + + + + G ++H +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 213 KMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVF 272
++GF G +S I +Y K G+ +NA ++ P L N+++ L H G ++
Sbjct: 145 RLGF-VGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 273 EMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYE--SDVSVSCSL 330
EMF M G+ D+ F+ H C ++ E SD+ + SL
Sbjct: 204 EMFVDMKRSGLEPDD--FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 331 IDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDR 390
ID Y + G + L+ +FE++ NV ++S+I G+A NG + LE M G++P++
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK 321
Query: 391 VTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXX 450
+TF+ VL+ C H GLVEEG+ F M+S + P H+ C+V
Sbjct: 322 ITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Query: 451 QTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEA 510
+ P + + ++W L+ C + + A ++ L+P + V++ ++N Y+ G ++
Sbjct: 382 EMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKD 441
Query: 511 SMQIKEIAIARKMTKEIGHS 530
+++++ +K+ K +S
Sbjct: 442 VERVRKLMKTKKVAKIPAYS 461
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 127/251 (50%), Gaps = 5/251 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+H A++LGF + + S + LY + G + A K+FDE PER L +WN ++ G
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHA 196
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVD-TNIF 120
G +E + ++ ++K +E + + + C QLH V++ + ++I
Sbjct: 197 GRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIM 256
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
+ N+L+D Y CG + A F+ + +V+SW+SM+ YA NG L+ALE M+ +G
Sbjct: 257 MLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGF--DNGSVHVQSALIDMYGKCGDIK 238
+P+ +FVG L+ G G + + ++K F + G H ++D+ + G +K
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEG-KTYFAMMKSEFELEPGLSHY-GCIVDLLSRDGQLK 374
Query: 239 NAVSTYESLPM 249
A E +PM
Sbjct: 375 EAKKVVEEMPM 385
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
+SL+ +Y + G +DLA +F+E+ +RN+ +W+ ++ G+ G E L + +++ V
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 81 LNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKK 140
N ++F ++ C + +EG + ++ + +VD S G L EAKK
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 141 SFQAIPME-DVLSWNSML 157
+ +PM+ +V+ W ++
Sbjct: 379 VVEEMPMKPNVMVWGCLM 396
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 213/465 (45%), Gaps = 13/465 (2%)
Query: 75 KLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSAC-- 132
K+D V N + LI C++ R E Q+ + IK D + FVA L++F +
Sbjct: 23 KIDTV--NTQNPILLISKCNSLR---ELMQIQAYAIKSHIEDVS-FVAK-LINFCTESPT 75
Query: 133 -GCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGF 191
+S A+ F+A+ D++ +NSM Y+ L+ L + G P +F
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 192 LNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
L + G Q+HC +K+G D+ +V+V LI+MY +C D+ +A ++ +
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDD-NVYVCPTLINMYTECEDVDSARCVFDRIVEPC 194
Query: 252 LECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXX 311
+ C N+++T ++ +F M + + +E+T +
Sbjct: 195 VVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI-- 252
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLG 371
H A K + V V+ +LID + + G + + +FE++ + ++++I +A +G
Sbjct: 253 HKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKA 312
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSC 431
++ + M E M + ++PD +TFL +L CSH+G VEEGR F+ M S GI P H+
Sbjct: 313 EKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGS 372
Query: 432 MVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPED 491
MV + P ++W LL +C H N + + ++ + LD
Sbjct: 373 MVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSH 432
Query: 492 FAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
++ +SN Y+ ++E ++++ RK K G S I +N+
Sbjct: 433 GGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 128/255 (50%), Gaps = 2/255 (0%)
Query: 36 ALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSN 95
A LF+ + E ++ +N + RG+ E+ L+ EI D + + +F L++ C+
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 96 KRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNS 155
+ +EG QLH +K+G +D N++V L++ Y+ C + A+ F I V+ +N+
Sbjct: 142 AKALEEGRQLHCLSMKLG-LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNA 200
Query: 156 MLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMG 215
M++ YA +AL L MQ KP+ + + L+ + G+ G IH K
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 216 FDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMF 275
F V V +ALIDM+ KCG + +AVS +E + + ++++ + + G + MF
Sbjct: 261 F-CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMF 319
Query: 276 GLMVDEGIGLDEVTF 290
M E + DE+TF
Sbjct: 320 ERMRSENVQPDEITF 334
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 141/297 (47%), Gaps = 14/297 (4%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
+HC ++KLG N+Y+ +L+ +Y +D A +FD + E + +N ++ G+
Sbjct: 150 QLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRN 209
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+E L L+ E++ ++ N ++ ++ C+ D G +H + K + + V
Sbjct: 210 RPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY-VKVN 268
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
AL+D ++ CG L +A F+ + +D +W++M+ YA++G ++ + M+ +
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 328
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P +F+G LN S TG G + ++ S+ +++D+ + G++++A
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE 388
Query: 243 TYESLPMTS--------LECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFS 291
+ LP++ L C+S L + + +FE+ D+ G D V S
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFEL-----DDSHGGDYVILS 440
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 192/417 (46%), Gaps = 9/417 (2%)
Query: 105 LHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNG 164
LH +K+G+ ++ F N LV Y ++ A+K F + +V+SW S++S Y D G
Sbjct: 51 LHTLTLKLGFA-SDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 165 LFLDALELLYIM-QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHV 223
+AL + M + P+ +F S + G IH + G V V
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIV-V 168
Query: 224 QSALIDMYGKCGDIKNAVSTYESL--PMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDE 281
S+L+DMYGKC D++ A ++S+ ++ S++T+ + E+F +
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-RSFNA 227
Query: 282 GIGLDEVT-FSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHV 340
+ D F H + GYES+ V+ SL+D Y + G +
Sbjct: 228 ALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
Query: 341 LLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGC 400
++K+F +I +V +TS+I A +GLG+ +++ + M+ + P+ VT L VL C
Sbjct: 288 SCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHAC 347
Query: 401 SHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXX--XXXXXXXXXXXXQTPGRGDC 458
SHSGLV EG + M +G+ PD H++C+V +
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGA 407
Query: 459 VMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIK 515
++W +LL + R+H + A+K L+ + + + ++ +SN Y+ +G +E S ++
Sbjct: 408 LLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLR 464
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 146/296 (49%), Gaps = 11/296 (3%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
N +H +KLGF + + + LV Y++L I+ A KLFDE+ E N+ +W V+ G+ ++
Sbjct: 49 NLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDM 108
Query: 62 GLFDELLGLYNEIKLDN-VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
G L ++ ++ D V N +F + + CS G +H +++ + NI
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHAR-LEISGLRRNIV 167
Query: 121 VANALVDFYSACGCLSEAKKSFQAI--PMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
V+++LVD Y C + A++ F ++ +V+SW SM++ YA N +A+EL F
Sbjct: 168 VSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF--RSF 225
Query: 179 WGKKPSIRS----FVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
S R+ ++ S G +G H V + G+++ +V V ++L+DMY KC
Sbjct: 226 NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTV-VATSLLDMYAKC 284
Query: 235 GDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
G + A + + S+ S++ + G+ + ++F MV I + VT
Sbjct: 285 GSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTL 340
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 7/244 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDEL--PERNLATWNLVLRGFC 59
++H R G N+ + SSLV +Y + ++ A ++FD + RN+ +W ++ +
Sbjct: 151 KNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYA 210
Query: 60 ELGLFDELLGLYNEIK--LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDT 117
+ E + L+ L + N +I CS+ G HG V + G+ ++
Sbjct: 211 QNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGY-ES 269
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
N VA +L+D Y+ CG LS A+K F I V+S+ SM+ A +GL A++L M
Sbjct: 270 NTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQ-IHCCVIKMGFDNGSVHVQSALIDMYGKCGD 236
P+ + +G L+ S +G G++ + K G S H + ++DM G+ G
Sbjct: 330 AGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHY-TCVVDMLGRFGR 388
Query: 237 IKNA 240
+ A
Sbjct: 389 VDEA 392
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 105/246 (42%), Gaps = 10/246 (4%)
Query: 173 LYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYG 232
L++ Q+ +++ ++ S++ NA F +H +K+GF + + V +I Y
Sbjct: 17 LFVPQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVIS-YV 75
Query: 233 KCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLM-VDEGIGLDEVTFS 291
K +I A ++ + ++ S+++ G + MF M D + +E TF+
Sbjct: 76 KLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFA 135
Query: 292 TXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQI- 350
+ H G ++ VS SL+D Y + V +++VF+ +
Sbjct: 136 SVFKACSALAESRIGKNI--HARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMI 193
Query: 351 -PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVT---FLCVLTGCSHSGLV 406
NV +TS+I +A N G + +E+ + L DR V++ CS G +
Sbjct: 194 GYGRNVVSWTSMITAYAQNARGHEAIELFRS-FNAALTSDRANQFMLASVISACSSLGRL 252
Query: 407 EEGRLV 412
+ G++
Sbjct: 253 QWGKVA 258
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 205/461 (44%), Gaps = 91/461 (19%)
Query: 10 KLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLG 69
KLGF + Y+ + ++ +Y++ ++ A K+FD++ +R + WN+++ G+ + G +E
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 70 LYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFY 129
L++ + ++V +S+ +I G +
Sbjct: 189 LFDMMPENDV----VSWTVMITG------------------------------------F 208
Query: 130 SACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPS----- 184
+ L A+K F +P + V+SWN+MLS YA NG DAL L M G +P+
Sbjct: 209 AKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWV 268
Query: 185 --------------IRSFVGFLN-----LSSKTGNALFGMQIHCCVIK--------MGFD 217
RS V ++ L+ AL M C I+ +G
Sbjct: 269 IVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQ 328
Query: 218 NGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGL 277
V +A+I Y + GD+ +A ++++P ++ NSL+ H G E F
Sbjct: 329 RNLV-TWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFED 387
Query: 278 MVDEGIGL-DEVTFSTXXXXXXXXXXXXXXXXXXXHC--CAIKL---GYESDVSVSCSLI 331
M+D G DEVT + + IKL GY S LI
Sbjct: 388 MIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRS-------LI 440
Query: 332 DAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRV 391
Y R G++ +++VF+++ +V + ++ FA NG G + L +L M +G++PDRV
Sbjct: 441 FMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 392 TFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCM 432
T+ VLT C+ +GL++EG+ +F S+ +P DH++CM
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM 536
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 219/512 (42%), Gaps = 38/512 (7%)
Query: 50 TWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHV 109
+W ++R + F E + +Y ++ + + + ++R C +G +H
Sbjct: 340 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 399
Query: 110 IKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLF--- 166
+K G ++V LV YS G + AKK+F I ++ +SWNS+L Y ++G
Sbjct: 400 LKNGLCGC-VYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA 458
Query: 167 ---------LDALELLYIMQFWGKKPSIRS----FVGFLNLSSKTGNALFGMQIHCCVIK 213
DA+ I+ + KK + + F S + N L G ++C +K
Sbjct: 459 RRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMK 518
Query: 214 MG---FD-----NGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
+ FD NG + +I Y K GD+++A + + ++++
Sbjct: 519 LARTYFDAMPQKNGVSWI--TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQN 576
Query: 266 GIVDDVFEMFGLMVDEG--IGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESD 323
G D ++F M++ I DE+T S+ + + G + D
Sbjct: 577 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYIT--EHGIKID 634
Query: 324 VSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIR 383
+S SLID Y++ G + K+F + + ++++I G NG+ + + AMI
Sbjct: 635 DLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIE 694
Query: 384 KGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXX 443
K + P+ VTF +L+ SHSGLV+EG FNSM+ H + P DH+ MV
Sbjct: 695 KKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLE 753
Query: 444 XXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAK--ILLGLDPEDFAVHLQVSNF 501
P + + +W +LL + +H N G A + L DP + HL +
Sbjct: 754 EAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAM--I 811
Query: 502 YSETGEFEASMQIKEIAIARKMTKEIGHSLIG 533
YS G ++ + +++ +K++ +G L G
Sbjct: 812 YSSVGRWDDARTVRDSIKEKKLS--VGSFLAG 841
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 49/324 (15%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +A+K G +Y+ + LVGLY RLG I+LA K FD++ E+N +WN +L G+ E G
Sbjct: 395 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 454
Query: 64 FDELLGLYNEI-KLDNVELNGLSFCYLIRG-----CS----------------------- 94
DE ++++I + D V N + Y +G CS
Sbjct: 455 LDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNC 514
Query: 95 -----NKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMED 149
+ +FD Q +G V W+ ++ Y+ G + A++ F+ + +D
Sbjct: 515 REMKLARTYFDAMPQKNG----VSWI--------TMISGYTKLGDVQSAEELFRLMSKKD 562
Query: 150 VLSWNSMLSVYADNGLFLDALELLYIMQFWGK--KPSIRSFVGFLNLSSKTGNALFGMQI 207
L +++M++ Y NG DAL+L M +P + ++ +S+ GN FG +
Sbjct: 563 KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV 622
Query: 208 HCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGI 267
+ + G + + ++LID+Y K GD A + +L ++++ G+
Sbjct: 623 ESYITEHGIKIDDL-LSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGM 681
Query: 268 VDDVFEMFGLMVDEGIGLDEVTFS 291
+ +F M+++ I + VTF+
Sbjct: 682 ATEANSLFTAMIEKKIPPNVVTFT 705
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 199/452 (44%), Gaps = 34/452 (7%)
Query: 82 NGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKS 141
N +++ L+ G S D + H + + + F N ++ Y +A+
Sbjct: 5 NTITWNSLLIGISK----DPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSF 60
Query: 142 FQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNA 201
F +P +D SWN+M++ YA G A EL Y M + + + NA
Sbjct: 61 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSM---------------MEKNEVSWNA 105
Query: 202 LFGMQIHCCVIKMG---FDNGSVH---VQSALIDMYGKCGDIKNAVSTYESLPMT-SLEC 254
+ I C ++ F V +A+I Y K ++ A + ++ + + +L
Sbjct: 106 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 165
Query: 255 CNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCC 314
N++++ + +D ++F M++EGI + S+ H
Sbjct: 166 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI--HQI 223
Query: 315 AIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQC 374
K +DV+ SLI Y + G + + K+FE + +V + ++I+G+A +G +
Sbjct: 224 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA 283
Query: 375 LEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVX 434
L + MI ++PD +TF+ VL C+H+GLV G F SM + + P DH++CMV
Sbjct: 284 LCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVD 343
Query: 435 XXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAV 494
P R ++ +LL +CRVH+N + AA+ LL L+ ++ A
Sbjct: 344 LLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAG 403
Query: 495 HLQVSNFYSETGEFEASMQIKEIAIARKMTKE 526
++Q++N Y+ +E ++A RK KE
Sbjct: 404 YVQLANIYASKNRWE------DVARVRKRMKE 429
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 16/279 (5%)
Query: 13 FGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYN 72
F +N+ ++ Y+R + A FD +P ++ A+WN ++ G+ G ++ L+
Sbjct: 39 FSYNI-----MLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 93
Query: 73 EIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSAC 132
+ +E N +S+ +I G ++ S H KV V + A++ Y
Sbjct: 94 SM----MEKNEVSWNAMISGYIECGDLEKAS----HFFKVAPV-RGVVAWTAMITGYMKA 144
Query: 133 GCLSEAKKSFQAIPM-EDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGF 191
+ A+ F+ + + +++++WN+M+S Y +N D L+L M G +P+
Sbjct: 145 KKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSA 204
Query: 192 LNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
L S+ G QIH V K N V ++LI MY KCG++ +A +E +
Sbjct: 205 LLGCSELSALQLGRQIHQIVSKSTLCN-DVTALTSLISMYCKCGELGDAWKLFEVMKKKD 263
Query: 252 LECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ N++++ G D +F M+D I D +TF
Sbjct: 264 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 2/229 (0%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELP-ERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNV 79
++++ YM+ ++LA +F ++ +NL TWN ++ G+ E ++ L L+ + + +
Sbjct: 135 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 194
Query: 80 ELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
N + GCS G Q+H ++ + ++ +L+ Y CG L +A
Sbjct: 195 RPNSSGLSSALLGCSELSALQLGRQIH-QIVSKSTLCNDVTALTSLISMYCKCGELGDAW 253
Query: 140 KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
K F+ + +DV++WN+M+S YA +G AL L M +P +FV L + G
Sbjct: 254 KLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 313
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
GM +++ + ++D+ G+ G ++ A+ S+P
Sbjct: 314 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 362
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 207/448 (46%), Gaps = 11/448 (2%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDF--YSACGCLSEAKKSFQAIP 146
+++GC++ + ++H HVI G + + + N L+ F S G LS A+ F
Sbjct: 11 MLQGCNSMKKL---RKIHSHVIING-LQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFD 66
Query: 147 MEDVLS-WNSMLSVYADNGLFLDALELLYIMQFWG-KKPSIRSFVGFLNLSSKTGNALFG 204
+ S WN ++ ++++ L+++ M +P + +F L + +
Sbjct: 67 SDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKC 126
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLH 264
++IH VI+ GF + ++ V ++L+ Y G ++ A ++ +P+ L N ++ H
Sbjct: 127 LEIHGSVIRSGFLDDAI-VATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSH 185
Query: 265 CGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDV 324
G+ + M+ M +EG+ D T C I+ ES V
Sbjct: 186 VGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRC--ESCV 243
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK 384
VS +LID Y + G + + VF + +V + S+I G+ +G G + + M+
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXX 444
G++P+ +TFL +L GCSH GLV+EG F M S ++P+ H+ CMV
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363
Query: 445 XXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSE 504
+ D V+W +LL SC++HRN +G A K L+ L+ + ++ +++ YS
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423
Query: 505 TGEFEASMQIKEIAIARKMTKEIGHSLI 532
+ +A ++++ + + G S I
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWI 451
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 127/239 (53%), Gaps = 3/239 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H I+ GF + + +SLV Y G +++A K+FDE+P R+L +WN+++ F +GL
Sbjct: 129 IHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGL 188
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
++ L +Y + + V + + L+ C++ + G LH + ++ +FV+N
Sbjct: 189 HNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR-CESCVFVSN 247
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
AL+D Y+ CG L A F + DVL+WNSM+ Y +G ++A+ M G +P
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 307
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFD-NGSVHVQSALIDMYGKCGDIKNAV 241
+ +F+G L S G G++ H ++ F +V ++D+YG+ G ++N++
Sbjct: 308 NAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSL 365
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 8/264 (3%)
Query: 31 GLIDLALKLFDEL-PERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGL-SFCY 88
G + A LFD + + + WN ++RGF + YN + L +V L +F +
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
++ C + + ++HG VI+ G++D I VA +LV YSA G + A K F +P+
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAI-VATSLVRCYSANGSVEIASKVFDEMPVR 171
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
D++SWN M+ ++ GL AL + M G + V L+ + G+ +H
Sbjct: 172 DLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH 231
Query: 209 --CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCG 266
C I+ V V +ALIDMY KCG ++NA+ + + + NS++ G
Sbjct: 232 RIACDIRC---ESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG 288
Query: 267 IVDDVFEMFGLMVDEGIGLDEVTF 290
+ F MV G+ + +TF
Sbjct: 289 HGVEAISFFRKMVASGVRPNAITF 312
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 155/302 (51%), Gaps = 36/302 (11%)
Query: 19 IGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELL--GLYNEIKL 76
+GSSL+ +Y + G + A K+FDE+PERN+ATWN ++ G+ G D +L GL+ EI
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG--DAVLASGLFEEI-- 57
Query: 77 DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHV------IKVGWV--------------- 115
+V N +++ +I+G + ++ +L + +K V
Sbjct: 58 -SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDAR 116
Query: 116 -------DTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLD 168
+ N FV + ++ Y G + EA+ F + D++ WN++++ YA NG D
Sbjct: 117 KFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDD 176
Query: 169 ALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALI 228
A++ + MQ G +P + L+ +++G G ++H + G + V +ALI
Sbjct: 177 AIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQF-VSNALI 235
Query: 229 DMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEV 288
DMY KCGD++NA S +ES+ + S+ CCNS+++ L G + EMF M + DE+
Sbjct: 236 DMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEI 295
Query: 289 TF 290
TF
Sbjct: 296 TF 297
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 191/440 (43%), Gaps = 32/440 (7%)
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNG-------LF------ 166
V ++L+ Y CGC+ A+K F +P +V +WN+M+ Y NG LF
Sbjct: 1 MVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVC 60
Query: 167 LDALELLYIMQFWGKKPSIRSF------VGFLNLSSKTGNALFGMQIHCCVIKMG----- 215
+ + + +++ +GK+ I + F + K + + G+ ++ ++
Sbjct: 61 RNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFE 120
Query: 216 -FDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEM 274
+ V S ++ Y + GD+ A + + + L N+L+ G DD +
Sbjct: 121 DIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDA 180
Query: 275 FGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAY 334
F M EG D VT S+ H G E + VS +LID Y
Sbjct: 181 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV--HSLINHRGIELNQFVSNALIDMY 238
Query: 335 LRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFL 394
+ G + + VFE I + +V C S+I+ A +G GK+ LEM M LKPD +TF+
Sbjct: 239 AKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFI 298
Query: 395 CVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPG 454
VLT C H G + EG +F+ M++ + P+ HF C++ +
Sbjct: 299 AVLTACVHGGFLMEGLKIFSEMKT-QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHV 357
Query: 455 RGDCVMWSSLLRSCRVHRNETVGRRAAKIL--LGLDPEDFAV-HL-QVSNFYSETGEFEA 510
+ + + +LL +C+VH + + + KI+ G ++ HL +SN Y+ T ++
Sbjct: 358 KPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQT 417
Query: 511 SMQIKEIAIARKMTKEIGHS 530
+ ++ R + K G S
Sbjct: 418 AEALRVEMEKRGLEKSPGLS 437
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
N ++ S ++ Y R+G + A +F + R+L WN ++ G+ + G D+ + + ++
Sbjct: 126 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 185
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
+ E + ++ ++ C+ D G ++H + G ++ N FV+NAL+D Y+ CG L
Sbjct: 186 GEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG-IELNQFVSNALIDMYAKCGDL 244
Query: 136 SEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLS 195
A F++I + V NSM+S A +G +ALE+ M+ KP +F+ L
Sbjct: 245 ENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC 304
Query: 196 SKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
G + G++I + H LI + G+ G +K A
Sbjct: 305 VHGGFLMEGLKIFSEMKTQDVKPNVKHF-GCLIHLLGRSGKLKEA 348
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 159/336 (47%), Gaps = 9/336 (2%)
Query: 208 HCCVIKMGFDNGS---VHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLH 264
H + + FD S V +A++ Y + GDI NAV+ +E +P + N+++ +
Sbjct: 177 HITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQ 236
Query: 265 CGIVDDVFEMFGLMVDE-GIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESD 323
G+ + +F M++E I +EVT H A + SD
Sbjct: 237 NGLFLEAVSLFRRMINEPSIRPNEVT--VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSD 294
Query: 324 VSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIR 383
V VS SL+D Y + G++ + VF+ ++ + S+IN FA +G ++ + + E M++
Sbjct: 295 VFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMK 354
Query: 384 ---KGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXX 440
+KPD +TF+ +L C+H GLV +GR F+ M + GI P +H+ C++
Sbjct: 355 LNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAG 414
Query: 441 XXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSN 500
+ D +W SLL +C++H + + A K L+ L+P + ++N
Sbjct: 415 RFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMAN 474
Query: 501 FYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
Y E G +E + + +++ + K G S I +++
Sbjct: 475 LYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDN 510
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 120/249 (48%), Gaps = 17/249 (6%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNE-I 74
N+ ++++ Y R G I A+ LF+++PER++ +WN +L + GLF E + L+ I
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 75 KLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGC 134
++ N ++ ++ C+ +H + + +++FV+N+LVD Y CG
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRD-LSSDVFVSNSLVDLYGKCGN 310
Query: 135 LSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDAL---ELLYIMQFWGKKPSIRSFVGF 191
L EA F+ + + +WNSM++ +A +G +A+ E + + KP +F+G
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 192 LN------LSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYE 245
LN L SK G F + + + G + H LID+ G+ G A+
Sbjct: 371 LNACTHGGLVSK-GRGYFDLMTN----RFGIEPRIEHY-GCLIDLLGRAGRFDEALEVMS 424
Query: 246 SLPMTSLEC 254
++ M + E
Sbjct: 425 TMKMKADEA 433
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 23/202 (11%)
Query: 96 KRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNS 155
++ FDE S+ N+ A++ Y+ G +S A F+ +P DV SWN+
Sbjct: 182 RQLFDEMSE------------RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNA 229
Query: 156 MLSVYADNGLFLDALELLYIMQFWGKKPSIR----SFVGFLNLSSKTGNALFGMQIHCCV 211
+L+ NGLFL+A+ L M +PSIR + V L+ ++TG IH
Sbjct: 230 ILAACTQNGLFLEAVSLFRRMI---NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFA 286
Query: 212 IKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDV 271
+ + V V ++L+D+YGKCG+++ A S ++ SL NS++ G ++
Sbjct: 287 YRRDL-SSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEA 345
Query: 272 FEMFGLMVD---EGIGLDEVTF 290
+F M+ I D +TF
Sbjct: 346 IAVFEEMMKLNINDIKPDHITF 367
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 145/313 (46%), Gaps = 7/313 (2%)
Query: 225 SALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIG 284
+ LID K +I A ++S+P+ L NSL++ + ++F MV G+
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 285 LDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQ 344
D V + + +L +S ++ L+D Y + G + +
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDS--FLATGLVDFYAKCGFIDTAM 304
Query: 345 KVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSG 404
++FE +F + ++I G A +G G+ ++ M+ G+KPD VTF+ VL GCSHSG
Sbjct: 305 EIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSG 364
Query: 405 LVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTP----GRGDCVM 460
LV+E R +F+ M SL+ ++ + H+ CM Q P R +
Sbjct: 365 LVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLA 424
Query: 461 WSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIA 520
WS LL CR+H N + +AA + L PED V+ + Y+ +E ++++EI
Sbjct: 425 WSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDR 484
Query: 521 -RKMTKEIGHSLI 532
+K+ K +G S +
Sbjct: 485 DKKVKKNVGFSKV 497
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 126/279 (45%), Gaps = 34/279 (12%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLAT----------- 50
++HC+A++ G +L+ ++L+ +Y + ID AL+LFDE P+R++ T
Sbjct: 137 KTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKA 196
Query: 51 --------------------WNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLI 90
WN ++ G+ ++ E + L++E+ ++ + ++ +
Sbjct: 197 REIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTL 256
Query: 91 RGCSNKRFFDEGSQLHGHVI-KVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMED 149
C+ + +G +H + K ++D+ F+A LVDFY+ CG + A + F+ +
Sbjct: 257 SACAQSGDWQKGKAIHDYTKRKRLFIDS--FLATGLVDFYAKCGFIDTAMEIFELCSDKT 314
Query: 150 VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHC 209
+ +WN+M++ A +G ++ M G KP +F+ L S +G +
Sbjct: 315 LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD 374
Query: 210 CVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
+ + N + + D+ G+ G I+ A E +P
Sbjct: 375 QMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMP 413
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 57/94 (60%)
Query: 321 ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEA 380
+ DV LID +++ ++ ++++F+ +PL ++ + S+I+G+A ++ +++ +
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 381 MIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFN 414
M+ GLKPD V + L+ C+ SG ++G+ + +
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHD 273
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 18 YIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLD 77
++ + LV Y + G ID A+++F+ ++ L TWN ++ G G + + + ++
Sbjct: 285 FLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSS 344
Query: 78 NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSE 137
++ +G++F ++ GCS+ DE L + + V+ + + D G + E
Sbjct: 345 GIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEE 404
Query: 138 AKKSFQAIP-----MEDVLSWNSML 157
A + + +P E +L+W+ +L
Sbjct: 405 AAEMIEQMPKDGGNREKLLAWSGLL 429
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 205/461 (44%), Gaps = 41/461 (8%)
Query: 103 SQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYAD 162
QLH H ++ G +T + L+ L A+K F +N ++ Y
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLL-----IPNLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 163 NGLFLDALELLYIMQFWGKKPSIRSFVGFLN--------------LSSKTGNALFGMQIH 208
+ +++ L ++ F G +PS +F F+ L S+ + F
Sbjct: 60 HHQPHESIVLYNLLSFDGLRPSHHTF-NFIFAASASFSSARPLRLLHSQFFRSGFESDSF 118
Query: 209 CCVI------KMG--------FDNGS---VHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
CC K+G FD S V V +A+I Y + GD+K A+ ++S+P +
Sbjct: 119 CCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 252 LECCNSLMTSLLHCGIVDDVFEMFGLM-VDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXX 310
+ ++++ G + +MF M D+ + + +T +
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 311 XHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC-FTSIINGFAWNG 369
+ A + G+ ++ V + I+ Y + G + +++++FE++ C + S+I A +G
Sbjct: 239 GY--ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 370 LGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHF 429
+ L + M+R+G KPD VTF+ +L C H G+V +G+ +F SME +H ISP +H+
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY 356
Query: 430 SCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDP 489
CM+ P + D V+W +LL +C H N + A++ L L+P
Sbjct: 357 GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEP 416
Query: 490 EDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHS 530
+ + +SN Y+ +++ ++++++ MTK G+S
Sbjct: 417 TNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 126/233 (54%), Gaps = 3/233 (1%)
Query: 19 IGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLD- 77
+ ++++ Y R G + A++LFD +P +N+ +W V+ GF + G + E L ++ ++ D
Sbjct: 150 VWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDK 209
Query: 78 NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSE 137
+V+ N ++ ++ C+N + G +L G+ + G+ D NI+V NA ++ YS CG +
Sbjct: 210 SVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFD-NIYVCNATIEMYSKCGMIDV 268
Query: 138 AKKSFQAI-PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS 196
AK+ F+ + ++ SWNSM+ A +G +AL L M G+KP +FVG L
Sbjct: 269 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACV 328
Query: 197 KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
G + G ++ + ++ + + +ID+ G+ G ++ A +++PM
Sbjct: 329 HGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPM 381
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 114/554 (20%), Positives = 207/554 (37%), Gaps = 118/554 (21%)
Query: 26 LYMRLGLID---LALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELN 82
L RL LI A KLFD +N +++ + E + LYN + D + +
Sbjct: 22 LLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPS 81
Query: 83 GLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSF 142
+F ++ ++ LH + G+ +++ F L+ Y+ G L A++ F
Sbjct: 82 HHTFNFIFAASASFSSARPLRLLHSQFFRSGF-ESDSFCCTTLITAYAKLGALCCARRVF 140
Query: 143 QAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNAL 202
+ DV WN+M++ Y G A+EL M + ++ S+ ++ S+ GN
Sbjct: 141 DEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM----PRKNVTSWTTVISGFSQNGNYS 196
Query: 203 FGMQIHCCVIK--------------------------------MGFDNG---SVHVQSAL 227
+++ C+ K +NG +++V +A
Sbjct: 197 EALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNAT 256
Query: 228 IDMYGKCGDIKNAVSTYESLPMTSLECC-NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLD 286
I+MY KCG I A +E L C NS++ SL G D+ +F M+ EG D
Sbjct: 257 IEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPD 316
Query: 287 EVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKV 346
VTF L+ A + G V+ Q++
Sbjct: 317 AVTF-------------------------------------VGLLLACVHGGMVVKGQEL 339
Query: 347 FEQIP-----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
F+ + P + + +I+ G ++ ++++ M +KPD V + +L CS
Sbjct: 340 FKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM---PMKPDAVVWGTLLGACS 396
Query: 402 HSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMW 461
G VE + ++ L +P +C++ W
Sbjct: 397 FHGNVEIAEIASEALFKLEPTNPG----NCVIMSNIYAANEK-----------------W 435
Query: 462 SSLLRSCRVHRNETVGRRAAK---ILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIA 518
+LR ++ + ET+ + A + +G+D F V + S +E ++EI
Sbjct: 436 DGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK-----SHPRSYEIYQVLEEIF 490
Query: 519 IARKMTKEIGHSLI 532
K+ K SL+
Sbjct: 491 RRMKLEKSRFDSLL 504
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDEL-PERNLATWNLVLRGFCELGLFDELLGL 70
GF N+Y+ ++ + +Y + G+ID+A +LF+EL +RNL +WN ++ G DE L L
Sbjct: 245 GFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTL 304
Query: 71 YNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYS 130
+ ++ + + + ++F L+ C + +G +L + +V + + ++D
Sbjct: 305 FAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLG 364
Query: 131 ACGCLSEAKKSFQAIPME-DVLSWNSML 157
G L EA + +PM+ D + W ++L
Sbjct: 365 RVGKLQEAYDLIKTMPMKPDAVVWGTLL 392
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 199/478 (41%), Gaps = 40/478 (8%)
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME 148
++R C N +H +I+ + D + FV L+ S + A F +
Sbjct: 81 VLRSCKN---IAHVPSIHAKIIRT-FHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP 136
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
+V + +M+ + +G D + L + M P L K + +IH
Sbjct: 137 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVL----KACDLKVCREIH 192
Query: 209 CCVIKMGFDNGSV-----------------------------HVQ-SALIDMYGKCGDIK 238
V+K+GF + HV + +I+ Y +CG IK
Sbjct: 193 AQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIK 252
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
A+ ++ + + C +++ L+ ++ E+F M E + +E F+
Sbjct: 253 EALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANE--FTAVCVLSA 310
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCF 358
H E V +LI+ Y R G + +++VF + +V +
Sbjct: 311 CSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISY 370
Query: 359 TSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES 418
++I+G A +G + + M+ +G +P++VT + +L CSH GL++ G VFNSM+
Sbjct: 371 NTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 430
Query: 419 LHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGR 478
+ + P +H+ C+V P D +M +LL +C++H N +G
Sbjct: 431 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGE 490
Query: 479 RAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLNS 536
+ AK L + D ++ +SN Y+ +G+++ S +I+E + KE G S I +++
Sbjct: 491 KIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDN 548
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 135/277 (48%), Gaps = 32/277 (11%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + +KLGFG + +G ++ +Y + G + A K+FDE+P+R+ +++ + E G
Sbjct: 191 IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 250
Query: 64 FDELLGLYNEIK-------------------------------LDNVELNGLSFCYLIRG 92
E L L+ ++K ++NV N + ++
Sbjct: 251 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSA 310
Query: 93 CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLS 152
CS+ + G +H V + ++ + FV NAL++ YS CG ++EA++ F+ + +DV+S
Sbjct: 311 CSDLGALELGRWVHSFV-ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVIS 369
Query: 153 WNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVI 212
+N+M+S A +G ++A+ M G +P+ + V LN S G G+++ +
Sbjct: 370 YNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMK 429
Query: 213 KMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
++ + ++D+ G+ G ++ A E++P+
Sbjct: 430 RVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPI 466
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 131/320 (40%), Gaps = 39/320 (12%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
S+H + I+ + ++ L+ + L +D A +F + N+ + ++ GF G
Sbjct: 93 SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSG 152
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGW-------- 114
+ + LY+ + ++V + +++ C K ++H V+K+G+
Sbjct: 153 RSADGVSLYHRMIHNSVLPDNYVITSVLKACDLK----VCREIHAQVLKLGFGSSRSVGL 208
Query: 115 ----------------------VDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLS 152
D + A +++ YS CG + EA + FQ + ++D +
Sbjct: 209 KMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVC 268
Query: 153 WNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCV- 211
W +M+ N ALEL MQ + + V L+ S G G +H V
Sbjct: 269 WTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVE 328
Query: 212 -IKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDD 270
+M N V +ALI+MY +CGDI A + + + N++++ L G +
Sbjct: 329 NQRMELSN---FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVE 385
Query: 271 VFEMFGLMVDEGIGLDEVTF 290
F MV+ G ++VT
Sbjct: 386 AINEFRDMVNRGFRPNQVTL 405
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 88/183 (48%), Gaps = 2/183 (1%)
Query: 18 YIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLD 77
++G++L+ +Y R G I+ A ++F + ++++ ++N ++ G G E + + ++
Sbjct: 337 FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNR 396
Query: 78 NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSE 137
N ++ L+ CS+ D G ++ + +V V+ I +VD G L E
Sbjct: 397 GFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEE 456
Query: 138 AKKSFQAIPME-DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS 196
A + + IP+E D + ++LS +G ++ E + F + P ++V NL +
Sbjct: 457 AYRFIENIPIEPDHIMLGTLLSACKIHG-NMELGEKIAKRLFESENPDSGTYVLLSNLYA 515
Query: 197 KTG 199
+G
Sbjct: 516 SSG 518
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 188/436 (43%), Gaps = 38/436 (8%)
Query: 129 YSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK-KPSIRS 187
Y++ G + + F D+ + + ++ + NGL A LLY+ + P+ +
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAF-LLYVQLLSSEINPNEFT 132
Query: 188 FVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESL 247
F L K+ + G IH V+K G +V + L+D+Y K GD+ +A ++ +
Sbjct: 133 FSSLL----KSCSTKSGKLIHTHVLKFGLGIDP-YVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 248 PMTSLECCNSLMTSLLHCGIVDDVFEMF-----------GLMVD----EGIGLDEVTFST 292
P SL +++T G V+ +F +M+D G D +
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 293 XXXXXXXXXXXXXXXXXXXHCCAIKLGYES---------------DVSVSCSLIDAYLRS 337
C+ E+ +V V LID Y +
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 338 GHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIR-KGLKPDRVTFLCV 396
G + + VF P ++ + ++I G+A +G + L + M GL+P +TF+
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 397 LTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRG 456
L C+H+GLV EG +F SM +GI P +H+ C+V
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 427
Query: 457 DCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKE 516
D V+WSS+L SC++H + +G+ A+ L+GL+ ++ +++ +SN Y+ G++E +++
Sbjct: 428 DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRN 487
Query: 517 IAIARKMTKEIGHSLI 532
+ + + KE G S I
Sbjct: 488 LMKEKGIVKEPGISTI 503
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 138/296 (46%), Gaps = 43/296 (14%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLAT------------- 50
+H +K G G + Y+ + LV +Y + G + A K+FD +PER+L +
Sbjct: 148 IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGN 207
Query: 51 ------------------WNLVLRGFCELGLFDELLGLYNEIKLD-NVELNGLSFCYLIR 91
WN+++ G+ + G ++ L L+ ++ + + + ++ +
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 92 GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVL 151
CS + G +H V K + N+ V L+D YS CG L EA F P +D++
Sbjct: 268 ACSQIGALETGRWIHVFV-KSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIV 326
Query: 152 SWNSMLSVYADNGLFLDALELLYIMQ-FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCC 210
+WN+M++ YA +G DAL L MQ G +P+ +F+G L + G G++I
Sbjct: 327 AWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI--- 383
Query: 211 VIKMGFDNG---SVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLL 263
MG + G + L+ + G+ G +K A YE++ +++ + L +S+L
Sbjct: 384 FESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA---YETIKNMNMDADSVLWSSVL 436
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 124/297 (41%), Gaps = 39/297 (13%)
Query: 27 YMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSF 86
Y G I +L LF + + +L + + GL D+ LY ++ + N +F
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 87 CYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIP 146
L++ CS K G +H HV+K G + + +VA LVD Y+ G + A+K F +P
Sbjct: 134 SSLLKSCSTK----SGKLIHTHVLKFG-LGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 147 ME-------------------------------DVLSWNSMLSVYADNGLFLDALELLYI 175
D++SWN M+ YA +G DAL L
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 176 MQFWGK-KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
+ GK KP + V L+ S+ G G IH V K +V V + LIDMY KC
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFV-KSSRIRLNVKVCTGLIDMYSKC 307
Query: 235 GDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVD-EGIGLDEVTF 290
G ++ AV + P + N+++ G D +F M G+ ++TF
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITF 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 102/245 (41%), Gaps = 46/245 (18%)
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDM-----YGKCGDIKNAVSTYESLPMTSLECCNSLM 259
+QIH +++ N +H + ++++ Y G I+++++ + L + +
Sbjct: 46 LQIHAAILR---HNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAI 102
Query: 260 TSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLG 319
+ G+ D F ++ ++ I +E TFS+ H +K G
Sbjct: 103 NTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLI------HTHVLKFG 156
Query: 320 YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTS------------------- 360
D V+ L+D Y + G V+ +QKVF+++P ++ T+
Sbjct: 157 LGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFD 216
Query: 361 ------------IINGFAWNGLGKQCLEMLEAMIRKG-LKPDRVTFLCVLTGCSHSGLVE 407
+I+G+A +G L + + ++ +G KPD +T + L+ CS G +E
Sbjct: 217 SMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALE 276
Query: 408 EGRLV 412
GR +
Sbjct: 277 TGRWI 281
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 7/343 (2%)
Query: 197 KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCN 256
K+G+ L G+QIH + GF + S+ + + L+D+Y C + +A ++ +P N
Sbjct: 125 KSGDLLGGLQIHGKIFSDGFLSDSL-LMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWN 183
Query: 257 SLMTSLLHCGIVDDVFEMFGLM---VDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHC 313
L + L DV +F M VD + D VT H
Sbjct: 184 VLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVT--CLLALQACANLGALDFGKQVHD 241
Query: 314 CAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQ 373
+ G +++S +L+ Y R G + + +VF + NV +T++I+G A NG GK+
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKE 301
Query: 374 CLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLH-GISPDRDHFSCM 432
+E M++ G+ P+ T +L+ CSHSGLV EG + F+ M S I P+ H+ C+
Sbjct: 302 AIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCV 361
Query: 433 VXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDF 492
V + D +W +LL +CRVH + +G R L+ L E+
Sbjct: 362 VDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEA 421
Query: 493 AVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
++ + N YS G++E +++ + +++ + G S I L
Sbjct: 422 GDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQ 464
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 124/250 (49%), Gaps = 5/250 (2%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + GF + + ++L+ LY A K+FDE+P+R+ +WN++ +
Sbjct: 135 IHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKR 194
Query: 64 FDELLGLYNEIKLDN---VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
++L L++++K D V+ +G++ ++ C+N D G Q+H + + G + +
Sbjct: 195 TRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG-LSGALN 253
Query: 121 VANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
++N LV YS CG + +A + F + +V+SW +++S A NG +A+E M +G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFD-NGSVHVQSALIDMYGKCGDIKN 239
P ++ G L+ S +G GM + F ++H ++D+ G+ +
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373
Query: 240 AVSTYESLPM 249
A S +S+ M
Sbjct: 374 AYSLIKSMEM 383
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/537 (22%), Positives = 219/537 (40%), Gaps = 50/537 (9%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH + ++ G + + + LV L D +L +F ERN N ++RG E
Sbjct: 48 VHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENAR 106
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
F+ + + + V+ + L+F ++++ S F G LH +K +VD + FV
Sbjct: 107 FESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK-NFVDCDSFVRL 165
Query: 124 ALVDFYSACGCLSEAKKSFQAIP----MEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
+LVD Y+ G L A + F+ P E +L WN +++ Y A L M
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSM--- 222
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
P S GS S LI Y G++
Sbjct: 223 ---PERNS-------------------------------GS---WSTLIKGYVDSGELNR 245
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
A +E +P ++ +L+ G + + M+++G+ +E T +
Sbjct: 246 AKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSK 305
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFT 359
H + G + D ++ +L+D Y + G + + VF + ++ +T
Sbjct: 306 SGALGSGIRI--HGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWT 363
Query: 360 SIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESL 419
++I G+A +G Q ++ M+ G KPD V FL VLT C +S V+ G F+SM
Sbjct: 364 AMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLD 423
Query: 420 HGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRR 479
+ I P H+ +V P D W++L R+C+ H+
Sbjct: 424 YAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAES 483
Query: 480 AAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMT-KEIGHSLIGLN 535
++ LL LDPE ++ + ++ G + ++ + +++ +++ + +G S I L+
Sbjct: 484 VSQNLLELDPELCGSYIFLDKTHASKGNIQ-DVEKRRLSLQKRIKERSLGWSYIELD 539
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 194/435 (44%), Gaps = 13/435 (2%)
Query: 104 QLHGHVIKVGWVD--TNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYA 161
QLH ++ + + +F+ ++ S+ ++ A + F +I WN+++ A
Sbjct: 66 QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACA 125
Query: 162 DNGLFLDALELLY--IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNG 219
+ + +LY +++ P +F L + G Q+HC ++K GF G
Sbjct: 126 HDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGF-GG 184
Query: 220 SVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMV 279
V+V + LI +YG CG + A ++ +P SL NS++ +L+ G D ++F M
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 280 D--EGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRS 337
E G + + C + + DV V SLI+ Y +
Sbjct: 245 RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM--DVLVKNSLIEMYCKC 302
Query: 338 GHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI--RKGLKPDRVTFLC 395
G + ++++VF+ + ++ + ++I GFA +G ++ + + M+ R+ ++P+ VTF+
Sbjct: 303 GSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVG 362
Query: 396 VLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGR 455
+L C+H G V +GR F+ M + I P +H+ C+V P +
Sbjct: 363 LLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMK 422
Query: 456 GDCVMWSSLLRS-CRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASM-Q 513
D V+W SLL + C+ + + A+ ++G ++ + + S Y AS +
Sbjct: 423 PDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASR 482
Query: 514 IKEIAIARKMTKEIG 528
++ I RK+ E G
Sbjct: 483 WNDVGIVRKLMSEHG 497
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 130/252 (51%), Gaps = 5/252 (1%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
VHC+ +K GFG ++Y+ + L+ LY G +DLA K+FDE+PER+L +WN ++
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDT--NI 119
G +D L L+ E++ + E +G + ++ C+ G+ H +++ VD ++
Sbjct: 231 GEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDV 289
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM--Q 177
V N+L++ Y CG L A++ FQ + D+ SWN+M+ +A +G +A+ M +
Sbjct: 290 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 349
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI 237
+P+ +FVG L + G G Q +++ ++ ++D+ + G I
Sbjct: 350 RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYI 409
Query: 238 KNAVSTYESLPM 249
A+ S+PM
Sbjct: 410 TEAIDMVMSMPM 421
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 135/284 (47%), Gaps = 14/284 (4%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFC-ELGLFDELLGLYNE- 73
L++ ++ L ++ A ++FD + + WN ++R ++ +E LY +
Sbjct: 82 TLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKM 141
Query: 74 IKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACG 133
++ + +F ++++ C+ F EG Q+H ++K G+ +++V N L+ Y +CG
Sbjct: 142 LERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGF-GGDVYVNNGLIHLYGSCG 200
Query: 134 CLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLN 193
CL A+K F +P ++SWNSM+ G + AL+L MQ +P + L+
Sbjct: 201 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLS 259
Query: 194 LSSKTGNALFGMQIHC-----CVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
+ G+ G H C + + D V V+++LI+MY KCG ++ A ++ +
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVDVAMD---VLVKNSLIEMYCKCGSLRMAEQVFQGMQ 316
Query: 249 MTSLECCNSLMTSLLHCGIVDDVFEMFGLMVD--EGIGLDEVTF 290
L N+++ G ++ F MVD E + + VTF
Sbjct: 317 KRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTF 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 88/168 (52%), Gaps = 3/168 (1%)
Query: 7 RAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDE 66
R + ++ + +SL+ +Y + G + +A ++F + +R+LA+WN ++ GF G +E
Sbjct: 279 RKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEE 338
Query: 67 LLGLYNEI--KLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANA 124
+ ++ + K +NV N ++F L+ C+++ F ++G Q +++ ++ +
Sbjct: 339 AMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGC 398
Query: 125 LVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLSVYADNGLFLDALE 171
+VD + G ++EA ++PM+ D + W S+L G ++ E
Sbjct: 399 IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 195/432 (45%), Gaps = 34/432 (7%)
Query: 117 TNIFVANALVDFYSACGCLSEAKKS-FQAIPMEDVLSWNSMLSVYADNGLFLDALELLYI 175
+N+ +++ LV YS L S F +P ++ SWN ++ ++ +G +++L
Sbjct: 45 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF-- 102
Query: 176 MQFWGK---KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYG 232
++ W + +P + L S + A G IH +K+GF + S+ V SAL+ MY
Sbjct: 103 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSS-SLFVSSALVIMYV 161
Query: 233 KCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGL-----MVDEGIGLDE 287
G + +A ++ +P+ +S++ + + G V M GL M G LD
Sbjct: 162 DMGKLLHARKLFDDMPVR-----DSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDS 216
Query: 288 VTFSTXXXXXXXXXXXXXXXXXXX------HCCAIKLGYE-SDVSVSCSLIDAYLRSGHV 340
V + C + LG +D+ V CS++D
Sbjct: 217 VVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILD-------- 268
Query: 341 LLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGC 400
+ VF + +V ++S+I G+ +G ++ + M+++G++P+ VTFL VL+ C
Sbjct: 269 -YAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSAC 327
Query: 401 SHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVM 460
+H GLVE+ L F M+ + I P+ H++ + P + D +
Sbjct: 328 AHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAV 386
Query: 461 WSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIA 520
++L C+V+ N VG R A+ L+ L P + ++ ++ YS G F+ + +++
Sbjct: 387 MGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKE 446
Query: 521 RKMTKEIGHSLI 532
++++K G S I
Sbjct: 447 KQISKVPGCSSI 458
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 173/403 (42%), Gaps = 48/403 (11%)
Query: 16 NLYIGSSLVGLYMRLG-LIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEI 74
N+ + S LV Y +L L +L +F +P RN+ +WN+++ F G + + L+ +
Sbjct: 46 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 105
Query: 75 KLDN-VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACG 133
++ V + + ++R CS R G +H +K+G+ +++FV++ALV Y G
Sbjct: 106 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGF-SSSLFVSSALVIMYVDMG 164
Query: 134 CLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLN 193
L A+K F +P+ D + + +M Y G + L + M + G V L
Sbjct: 165 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 224
Query: 194 LSSKTGNALFGMQIHCCVIK----MGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
+ G G +H I+ +G + G +A+ DMY KC + A + + ++
Sbjct: 225 ACGQLGALKHGKSVHGWCIRRCSCLGLNLG-----NAITDMYVKCSILDYAHTVFVNMSR 279
Query: 250 TSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXX 309
+ +SL+ G V F++F M+ EGI + VTF
Sbjct: 280 RDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTF------------------- 320
Query: 310 XXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNG 369
LG S + + ++L + L Q E +P + + S+ + + G
Sbjct: 321 --------LGVLSACAHGGLVEKSWL---YFRLMQ---EYNIVPELKHYASVADCMSRAG 366
Query: 370 LGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLV 412
L ++ + LE M +KPD VL+GC G VE G V
Sbjct: 367 LLEEAEKFLEDM---PVKPDEAVMGAVLSGCKVYGNVEVGERV 406
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 3/197 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H +KLGF +L++ S+LV +Y+ +G + A KLFD++P R+ + + G+ + G
Sbjct: 137 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 196
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVI-KVGWVDTNIFVA 122
L ++ E+ L+ + L+ C G +HG I + + N+
Sbjct: 197 AMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNL--G 254
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
NA+ D Y C L A F + DV+SW+S++ Y +G + + +L M G +
Sbjct: 255 NAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIE 314
Query: 183 PSIRSFVGFLNLSSKTG 199
P+ +F+G L+ + G
Sbjct: 315 PNAVTFLGVLSACAHGG 331
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 117/224 (52%)
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLG 371
H IK +S++ V +L+D Y + +VF+Q+ NV +TS+I+G+ ++G
Sbjct: 216 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 275
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSC 431
+ L+ E M +G +P+ VTFL VLT C+H GLV++G F SM+ +GI P+ H++
Sbjct: 276 SEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAA 335
Query: 432 MVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPED 491
MV ++P + +W SLL +CR+H N + AA L LDP +
Sbjct: 336 MVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTN 395
Query: 492 FAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
++ +N Y+ G EA+ +++ + K+ G+S I L
Sbjct: 396 GGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQ 439
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 21/239 (8%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + +GF N Y+ L+ LY L D +P WN ++ G+ + GL
Sbjct: 130 IHAQMFVVGFALNEYLKVKLLILYA----------LSDLIP------WNAMISGYVQKGL 173
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E L +Y +++ + + + +F + R CS + G + H +IK + +NI V +
Sbjct: 174 EQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIK-RCIKSNIIVDS 232
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
ALVD Y C S+ + F + +V++W S++S Y +G + L+ M+ G +P
Sbjct: 233 ALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRP 292
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIK--MGFDNGSVHVQSALIDMYGKCGDIKNA 240
+ +F+ L + G G + H +K G + H +A++D G+ G ++ A
Sbjct: 293 NPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHY-AAMVDTLGRAGRLQEA 349
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 113/263 (42%), Gaps = 21/263 (7%)
Query: 28 MRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFC 87
+R L + + F +R + L+G C G E +GL + +++ ++
Sbjct: 56 LRRMLAEKRIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYA 112
Query: 88 YLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPM 147
L++ C ++ + +G ++H + VG+ N ++ L+ Y+ +
Sbjct: 113 VLLQECKQRKEYTKGKRIHAQMFVVGFA-LNEYLKVKLLILYA----------------L 155
Query: 148 EDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQI 207
D++ WN+M+S Y GL + L + Y M+ P +F S G +
Sbjct: 156 SDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 215
Query: 208 HCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGI 267
H +IK + + V SAL+DMY KC + ++ L ++ SL++ + G
Sbjct: 216 HAVMIKRCIKSNII-VDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK 274
Query: 268 VDDVFEMFGLMVDEGIGLDEVTF 290
V +V + F M +EG + VTF
Sbjct: 275 VSEVLKCFEKMKEEGCRPNPVTF 297
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
H IK N+ + S+LV +Y + ++FD+L RN+ TW ++ G+ G
Sbjct: 215 AHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK 274
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGW-VDTNIFVA 122
E+L + ++K + N ++F ++ C++ D+G + H + +K + ++
Sbjct: 275 VSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHY 333
Query: 123 NALVDFYSACGCLSEAKKSFQAIP-MEDVLSWNSML 157
A+VD G L EA + P E W S+L
Sbjct: 334 AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 369
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 165/399 (41%), Gaps = 35/399 (8%)
Query: 150 VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTG--NALFGMQI 207
++S LS YA+ G AL L M P + + V L L S + G +
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALP-LDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 208 HCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGI 267
H +K F + V AL+DMYGKC + +A ++ +P + N++++ HCG
Sbjct: 71 HAHSVKSNFLSNPF-VGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 268 VDDVFEMF-----------------GLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXX 310
V + E++ GL+ E + F
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 311 XHCCAI--------------KLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVF 356
C AI + E + L++AY R G ++ Q VF+ + +V
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 357 CFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
++S+I+ +A +G + L+ + M + PD + FL VL CSH+GL +E + F M
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 417 ESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETV 476
+ +G+ +DH+SC+V P + W +LL +CR + +
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 477 GRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIK 515
AA+ LL ++PE+ A ++ + Y G E + +++
Sbjct: 370 AEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLR 408
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 40/282 (14%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
SVH ++K F N ++G +L+ +Y + + A KLFDE+P+RN WN ++ + G
Sbjct: 69 SVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCG 128
Query: 63 LFDELLGLY-------NEIKLDNV--------------------------ELNGLSFCYL 89
E + LY NE + + + N ++ L
Sbjct: 129 KVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLAL 188
Query: 90 IRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMED 149
+ CS F ++H + + ++ + + + LV+ Y CG + + F ++ D
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFR-NLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 150 VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHC 209
V++W+S++S YA +G AL+ M+ P + FLN+ +A +
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDD---IAFLNVLKACSHAGLADEALV 304
Query: 210 CVIKMGFDNG---SVHVQSALIDMYGKCGDIKNAVSTYESLP 248
+M D G S S L+D+ + G + A +++P
Sbjct: 305 YFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP 346
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 36/270 (13%)
Query: 55 LRGFCELGLFDELLGLYNEIKLD-NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVG 113
L + G ++ L L+ ++ + L+ F ++ C+ G +H H +K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 114 WVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL 173
++ +N FV AL+D Y C +S A+K F IP + + WN+M+S Y G +A+EL
Sbjct: 79 FL-SNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELY 137
Query: 174 YIM---------------------------QFWGK------KPSIRSFVGFLNLSSKTGN 200
M +F+ K KP++ + + ++ S G
Sbjct: 138 EAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGA 197
Query: 201 ALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMT 260
+IH + ++S L++ YG+CG I ++S+ + +SL++
Sbjct: 198 FRLIKEIHSYAFR-NLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLIS 256
Query: 261 SLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ G + + F M + D++ F
Sbjct: 257 AYALHGDAESALKTFQEMELAKVTPDDIAF 286
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 3/213 (1%)
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIP--LPNVFCFTSIINGFAWNGLGKQCLEMLEA 380
D+ V+ SLIDAY + G + + K F +IP N+ +T++I+ FA +G+GK+ + M +
Sbjct: 125 DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKD 184
Query: 381 MIRKGLKPDRVTFLCVLTGCSHSGLVEEGRL-VFNSMESLHGISPDRDHFSCMVXXXXXX 439
M R GLKP+RVT + VL CSH GL EE L FN+M + + I+PD H+ C+V
Sbjct: 185 MERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRK 244
Query: 440 XXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVS 499
+ P V+W LL +C V+ + + R + L+ L+ ++ +S
Sbjct: 245 GRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMS 304
Query: 500 NFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
N + TG F + + ++ R + K GHS +
Sbjct: 305 NIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 337
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 48/279 (17%)
Query: 32 LIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNE------------------ 73
+ID A K+FDE+PERN TWN+++ G LG F++ L +
Sbjct: 8 MID-AHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYAR 66
Query: 74 --------------IKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNI 119
+ D ++ N ++ ++ N +H +V K G+V +I
Sbjct: 67 VDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDI 126
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIP--MEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
V N+L+D Y+ CGC+ A K F IP ++++SW +M+S +A +G+ +A+ + M+
Sbjct: 127 RVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDME 186
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNA------LFGMQIHCCVIKMGFDNGSVHVQSALIDMY 231
G KP+ + + LN S G A F ++ I V L+DM
Sbjct: 187 RLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKI-----TPDVKHYGCLVDML 241
Query: 232 GKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDD 270
+ G ++ A +P+ ++ L C + DD
Sbjct: 242 RRKGRLEEAEKIALEIPIEEKAVVWRML--LGACSVYDD 278
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 3 SVHCRAIKLGF-GFNLYIGSSLVGLYMRLGLIDLALKLFDELP--ERNLATWNLVLRGFC 59
SVH K GF ++ + +SL+ Y + G I A K F E+P +NL +W ++ F
Sbjct: 111 SVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFA 170
Query: 60 ELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGS-QLHGHVIKVGWVDTN 118
G+ E + ++ +++ ++ N ++ ++ CS+ +E + ++ + +
Sbjct: 171 IHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPD 230
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMED-VLSWNSML---SVYADNGL 165
+ LVD G L EA+K IP+E+ + W +L SVY D L
Sbjct: 231 VKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAEL 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 100/254 (39%), Gaps = 3/254 (1%)
Query: 102 GSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYA 161
G+ + H + + N N ++ + G +A + +P V+SW +++ YA
Sbjct: 6 GNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYA 65
Query: 162 DNGLFLDALELLYIMQFWGK-KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGS 220
+A+ L M KP+ + + L G+ +H V K GF
Sbjct: 66 RVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD 125
Query: 221 VHVQSALIDMYGKCGDIKNAVSTYESLP--MTSLECCNSLMTSLLHCGIVDDVFEMFGLM 278
+ V ++LID Y KCG I++A + +P +L +++++ G+ + MF M
Sbjct: 126 IRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM 185
Query: 279 VDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSG 338
G+ + VT + + + DV L+D R G
Sbjct: 186 ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKG 245
Query: 339 HVLLSQKVFEQIPL 352
+ ++K+ +IP+
Sbjct: 246 RLEEAEKIALEIPI 259
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 129/613 (21%), Positives = 240/613 (39%), Gaps = 89/613 (14%)
Query: 6 CRAIKLGFGFNLYIG----------SSLVGLYMRLGLIDLAL----KLFDELPERNLATW 51
CR ++ FN + +S++ + + G ID L +++++ ++ T+
Sbjct: 628 CRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITY 687
Query: 52 NLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRG-CS--------------NK 96
++ G C G E + +NE+K + N ++F LI+G C +
Sbjct: 688 TSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEE 747
Query: 97 RFFDEGSQLHGHVIKVGWVDTNI---------------FVANALVDFYSACGCLSE---A 138
+ + S ++ ++ NI F + ++ A S+ A
Sbjct: 748 KEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSDVDYA 807
Query: 139 KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKT 198
K + WN ++ ++++ ++ + M +G P ++ + SS+
Sbjct: 808 YKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRL 867
Query: 199 GNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSL 258
N G +HC V+K G + + + + LI MYG D +A ++ +P +L NS+
Sbjct: 868 SNRKLGGSLHCSVVKSGLE-WDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSI 926
Query: 259 MTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTX------------------XXXXXXX 300
+ + G V L+ DE D VT+S+
Sbjct: 927 LDAYAKSGDVVSA----RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGS 982
Query: 301 XXXXXXXXXXXHCCAIKLG----------YESDVSV------SCSLIDAYLRSGHVLLSQ 344
C LG Y DV + SLID Y + G + +
Sbjct: 983 SKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAW 1042
Query: 345 KVFEQ--IPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSH 402
VF + + + + +II G A +G ++ L++ M + PD +TFLC+L CSH
Sbjct: 1043 SVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSH 1102
Query: 403 SGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWS 462
GLV+E F S++ G P +H++CMV + P + M
Sbjct: 1103 GGLVKEAWHFFKSLKE-SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLG 1161
Query: 463 SLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARK 522
+LL C H N + K L+ L P + ++ ++N Y+ +F A+ ++E +
Sbjct: 1162 ALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKG 1221
Query: 523 MTKEIGHSLIGLN 535
+ K GHS++ L+
Sbjct: 1222 VKKIAGHSILDLD 1234
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 129/281 (45%), Gaps = 36/281 (12%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
S+HC +K G ++L+I ++L+ +Y A KLFDE+P +NL TWN +L + + G
Sbjct: 875 SLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSG 934
Query: 63 -------LFDEL-----------------LGLYNE--------IKLDNVELNGLSFCYLI 90
+FDE+ G YN+ +++ + + N ++ +I
Sbjct: 935 DVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVI 994
Query: 91 RGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSF--QAIPME 148
C++ + G +H +++ V + + + +L+D Y+ CG + +A F ++
Sbjct: 995 CACAHLGALNRGKTVHRYILDVH-LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKET 1053
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
D L WN+++ A +G ++L+L + M+ P +F+ L S G
Sbjct: 1054 DALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFF 1113
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
+ + G + S H + ++D+ + G +K+A +P+
Sbjct: 1114 KSLKESGAEPKSEHY-ACMVDVLSRAGLVKDAHDFISEMPI 1153
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 147/310 (47%), Gaps = 17/310 (5%)
Query: 227 LIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGL- 285
LI Y K + + A+S + ++P S+ N+++ G ++ F M+ EG+ +
Sbjct: 44 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 103
Query: 286 DEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIK-LGYESDVSVSCSLIDAYLRSGHVLLSQ 344
+E TF H CAIK LG +V V SLI Y + G++ S
Sbjct: 104 NESTFPCAITAISNIASHGAGKSI--HACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 161
Query: 345 KVFEQIPLP--NVFCFTSIINGFAWNGLGKQCLEMLEAMIRK-GLKPDRVTFLCVLTGCS 401
F ++ N+ + S+I G+A NG G++ + M E M++ L+P+ VT L VL C+
Sbjct: 162 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 221
Query: 402 HSGLVEEGRLVFNSMESLHGISP---DRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDC 458
H+GL++EG + FN + + P + +H++CMV P
Sbjct: 222 HAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 280
Query: 459 VMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIA 518
W +LL C++H N+ + + AA +L LDP D + ++ +SN YS A + ++
Sbjct: 281 GFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYS------AMENWQNVS 334
Query: 519 IARKMTKEIG 528
+ R+ KE G
Sbjct: 335 LIRRKMKETG 344
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 6/235 (2%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVE 80
++L+ Y++ + AL LF +PER++ TWN V+ GF + G +E + + ++ + V
Sbjct: 42 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 101
Query: 81 L-NGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
+ N +F I SN G +H IK N+FV N+L+ FYS CG + ++
Sbjct: 102 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 161
Query: 140 KSFQAIPME--DVLSWNSMLSVYADNGLFLDALELLYIM-QFWGKKPSIRSFVGFLNLSS 196
+F + E +++SWNSM+ YA NG +A+ + M + +P+ + +G L +
Sbjct: 162 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 221
Query: 197 KTGNALFGMQIHCCVIKMGFDNGSVHVQ--SALIDMYGKCGDIKNAVSTYESLPM 249
G G + D + ++ + ++DM + G K A +S+P+
Sbjct: 222 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPL 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 85/163 (52%), Gaps = 9/163 (5%)
Query: 3 SVHCRAIK-LGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPE--RNLATWNLVLRGFC 59
S+H AIK LG FN+++ +SL+ Y + G ++ +L F++L E RN+ +WN ++ G+
Sbjct: 126 SIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYA 185
Query: 60 ELGLFDELLGLYNE-IKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
G +E + ++ + +K N+ N ++ ++ C++ EG + + D N
Sbjct: 186 HNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVN-DYDDPN 244
Query: 119 IFVAN---ALVDFYSACGCLSEAKKSFQAIPMEDVLS-WNSML 157
+ +VD S G EA++ +++P++ + W ++L
Sbjct: 245 LLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALL 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 4/178 (2%)
Query: 116 DTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYI 175
D N+ L+ Y EA F+A+P V++WN+++ ++ G +A+
Sbjct: 35 DPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVD 94
Query: 176 MQFWGKK-PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
M G P+ +F + S + G IH C IK +V V ++LI Y KC
Sbjct: 95 MLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKC 154
Query: 235 GDIKNAVSTYESL--PMTSLECCNSLMTSLLHCGIVDDVFEMFGLMV-DEGIGLDEVT 289
G++++++ + L ++ NS++ H G ++ MF MV D + + VT
Sbjct: 155 GNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVT 212
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 154/329 (46%), Gaps = 11/329 (3%)
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC 265
Q+HC + + G S+ + + L+D Y K GD+ +A ++ +P+ + N+L+ L+
Sbjct: 130 QLHCQINRRGLSADSL-LCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSG 188
Query: 266 GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESD-V 324
+ E++ M EGI EVT I GY +D V
Sbjct: 189 NRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN-------IFHGYSNDNV 241
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIP-LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIR 383
VS + ID Y + G V + +VFEQ +V + ++I GFA +G + LE+ + +
Sbjct: 242 IVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLED 301
Query: 384 KGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXX 443
G+KPD V++L LT C H+GLVE G VFN+M + G+ + H+ C+V
Sbjct: 302 NGIKPDDVSYLAALTACRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLR 360
Query: 444 XXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYS 503
D V+W SLL + ++ + + A++ + + + + +SN Y+
Sbjct: 361 EAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYA 420
Query: 504 ETGEFEASMQIKEIAIARKMTKEIGHSLI 532
G ++ ++++ ++++ K G S I
Sbjct: 421 AQGRWKDVGRVRDDMESKQVKKIPGLSYI 449
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 119/240 (49%), Gaps = 7/240 (2%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCEL 61
+ +HC+ + G + + ++L+ Y + G + A KLFDE+P R++A+WN ++ G
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSG 188
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
E + LY ++ + + + ++ + CS+ G G I G+ + N+ V
Sbjct: 189 NRASEAMELYKRMETEGIRRSEVTVVAALGACSHL-----GDVKEGENIFHGYSNDNVIV 243
Query: 122 ANALVDFYSACGCLSEAKKSFQAIP-MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
+NA +D YS CG + +A + F+ + V++WN+M++ +A +G ALE+ ++ G
Sbjct: 244 SNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNG 303
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
KP S++ L G +G+ + + G + H ++D+ + G ++ A
Sbjct: 304 IKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHY-GCVVDLLSRAGRLREA 362
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 13/268 (4%)
Query: 30 LGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNV------ELNG 83
G + A+++F +P+ WN ++RGF Y + + ++
Sbjct: 50 FGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 84 LSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQ 143
L+ + ++ C+ QLH + + G + + + L+D YS G L A K F
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRG-LSADSLLCTTLLDAYSKNGDLISAYKLFD 168
Query: 144 AIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF 203
+P+ DV SWN++++ +A+EL M+ G + S + V L S G+
Sbjct: 169 EMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKE 228
Query: 204 GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP-MTSLECCNSLMTSL 262
G I G+ N +V V +A IDMY KCG + A +E S+ N+++T
Sbjct: 229 GENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 263 LHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
G E+F + D GI D+V++
Sbjct: 284 AVHGEAHRALEIFDKLEDNGIKPDDVSY 311
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLG 371
H I G E + +S +L+D Y + G + S++VF + +V + ++I GFA +GL
Sbjct: 188 HSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLA 247
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSC 431
+ + + M + + PD +TFL +LT CSH GL+EEG+ F M I P +H+
Sbjct: 248 TEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGA 307
Query: 432 MVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPED 491
MV P D V+W SLL S R ++N +G A + L D
Sbjct: 308 MVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGD 367
Query: 492 FAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHS 530
+ + +SN YS T ++E++ +++E+ + K G S
Sbjct: 368 YVL---LSNIYSSTKKWESAQKVRELMSKEGIRKAKGKS 403
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 12/228 (5%)
Query: 28 MRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELL-GLYNEIKLDNVELNGLSF 86
M++G LA K+ ++N+ TWNL++ G+ ++E L L N + +++ N SF
Sbjct: 109 MKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSF 168
Query: 87 CYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIP 146
+ C+ +H +I G ++ N +++ALVD Y+ CG + +++ F ++
Sbjct: 169 ASSLAACARLGDLHHAKWVHSLMIDSG-IELNAILSSALVDVYAKCGDIGTSREVFYSVK 227
Query: 147 MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS-----KTGNA 201
DV WN+M++ +A +GL +A+ + M+ P +F+G L S + G
Sbjct: 228 RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE 287
Query: 202 LFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPM 249
FG+ I+ ++ A++D+ G+ G +K A ES+P+
Sbjct: 288 YFGLMSRRFSIQPKLEH-----YGAMVDLLGRAGRVKEAYELIESMPI 330
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH I G N + S+LV +Y + G I + ++F + +++ WN ++ GF GL
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
E + +++E++ ++V + ++F L+ CS+ +EG + G + + + +
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 124 ALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLS 158
A+VD G + EA + +++P+E DV+ W S+LS
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 138 AKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLY-IMQFWGKKPSIRSFVGFLNLSS 196
AKK + ++V++WN M+ Y N + +AL+ L ++ F KP+ SF L +
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 197 KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCN 256
+ G+ +H +I G + ++ + SAL+D+Y KCGDI + + S+ + N
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAI-LSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 257 SLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+++T G+ + +F M E + D +TF
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITF 269
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 152/345 (44%), Gaps = 18/345 (5%)
Query: 204 GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLL 263
G +H V K+GF S + + L+ Y K GD++ A ++ +P + N+++
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG-- 187
Query: 264 HCGIVDD-------VFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAI 316
+C D +F G G+ + H
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 317 KLGY--ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQC 374
KLG+ E DV + +L+D Y + G + + VFE + + NVF +TS+ G A NG G +
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNET 307
Query: 375 LEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVX 434
+L M G+KP+ +TF +L+ H GLVEEG +F SM++ G++P +H+ C+V
Sbjct: 308 PNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVD 367
Query: 435 XXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAV 494
P + D ++ SL +C ++ +G K LL ++ ED +
Sbjct: 368 LLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKL 427
Query: 495 -------HLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
++ +SN + G++ ++++ R++ G+S +
Sbjct: 428 SGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 123/259 (47%), Gaps = 17/259 (6%)
Query: 4 VHCRAIKLGFGF-NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
VH KLGF + + IG++L+ Y + G + A K+FDE+PER TWN ++ G+C
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCS-- 190
Query: 63 LFDELLGLYNEIKL-----------DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIK 111
+ G +N K V + ++ S + GS +HG++ K
Sbjct: 191 --HKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 112 VGWV-DTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDAL 170
+G+ + ++F+ ALVD YS CGCL+ A F+ + +++V +W SM + A NG +
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 171 ELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDM 230
LL M G KP+ +F L+ G G+++ + + ++D+
Sbjct: 309 NLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 231 YGKCGDIKNAVSTYESLPM 249
GK G I+ A ++P+
Sbjct: 369 LGKAGRIQEAYQFILAMPI 387
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Query: 102 GSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVY- 160
G +HG V K+G++ + + L+ FY+ G L A+K F +P ++WN+M+ Y
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 161 --ADNGLFLDALELLYIMQFW----GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKM 214
D G ++ +F G +P+ + V L+ S+TG G +H + K+
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKL 249
Query: 215 GF-DNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFE 273
GF V + +AL+DMY KCG + NA S +E + + ++ S+ T L G ++
Sbjct: 250 GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPN 309
Query: 274 MFGLMVDEGIGLDEVTFST 292
+ M + GI +E+TF++
Sbjct: 310 LLNRMAESGIKPNEITFTS 328
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 166/414 (40%), Gaps = 33/414 (7%)
Query: 154 NSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIK 213
N + Y + AL + + +G P +FV ++ KT G H IK
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 214 MGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFE 273
G D + VQ++L+ MY CG + A + +P + NS++ ++ G V +
Sbjct: 147 HGCDQ-VLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 274 MFGLMVDEGI-----------------------------GLDEVTFSTXXXXXXXXXXXX 304
+F M D+ I G +
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 305 XXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIING 364
H I+ S V + +LID Y + V L++++F+ + + N + +I
Sbjct: 266 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 365 FAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISP 424
+G + LE+ EAMI L+PD VTF+ VL GC+ +GLV +G+ ++ M I P
Sbjct: 326 HCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKP 385
Query: 425 DRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRG---DCVMWSSLLRSCRVHRNETVGRRAA 481
+ H CM P + W++LL S R N T+G A
Sbjct: 386 NFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIA 445
Query: 482 KILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLIGLN 535
K L+ DP ++ + + N YS TG +E +++E+ RK+ + G L+ L
Sbjct: 446 KSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLK 499
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 135/320 (42%), Gaps = 39/320 (12%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
VH R I G ++ L+ R G + ++ + + L N V + +
Sbjct: 41 VHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSSS 98
Query: 64 FDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVAN 123
+ LG Y +I + +F LI D G HG IK G D + V N
Sbjct: 99 PKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG-CDQVLPVQN 157
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALEL----------- 172
+L+ Y+ CG L AKK F IP D++SWNS+++ NG L A +L
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 173 --LYIMQFWG-KKPSIR-----------------SFVGFLNLSSKTGNALFGMQIHCCVI 212
+ I + G P + + V LN ++ G +H +I
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 213 KMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHC--GIVDD 270
+ F N SV + +ALIDMYGKC ++ A ++SL + + N ++ L HC G +
Sbjct: 278 RT-FLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI--LAHCLHGRPEG 334
Query: 271 VFEMFGLMVDEGIGLDEVTF 290
E+F M++ + DEVTF
Sbjct: 335 GLELFEAMINGMLRPDEVTF 354
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 42/280 (15%)
Query: 5 HCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG-- 62
H +AIK G L + +SL+ +Y G +DLA KLF E+P+R++ +WN ++ G G
Sbjct: 141 HGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDV 200
Query: 63 -----LFDEL------------------------LGLYNEIKLDNVELNGLSFCYLIRGC 93
LFDE+ + L+ E+ + N + L+ C
Sbjct: 201 LAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNAC 260
Query: 94 SNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSW 153
EG +H +I+ ++++++ + AL+D Y C + A++ F ++ + + ++W
Sbjct: 261 GRSARLKEGRSVHASLIRT-FLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTW 319
Query: 154 NSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKT-----GNALFGMQIH 208
N M+ + +G LEL M +P +FVG L ++ G + + + +
Sbjct: 320 NVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVD 379
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
IK F + Q + ++Y G + A ++LP
Sbjct: 380 EFQIKPNFGH-----QWCMANLYSSAGFPEEAEEALKNLP 414
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 4/160 (2%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELG 62
SVH I+ ++ I ++L+ +Y + + LA ++FD L RN TWN+++ C G
Sbjct: 271 SVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHG 330
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
+ L L+ + + + ++F ++ GC+ +G + ++ + N
Sbjct: 331 RPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQ 390
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDV----LSWNSMLS 158
+ + YS+ G EA+++ + +P EDV W ++LS
Sbjct: 391 WCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLS 430
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 177/414 (42%), Gaps = 35/414 (8%)
Query: 153 WNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVI 212
+N+++ Y G + +L L M +P+ +F + + + + +G+ +H +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 213 KMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVF 272
K GF VQ++ + YG+ GD++++ ++ + + CNSL+ + G +D F
Sbjct: 114 KRGFL-WDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 273 E-------------------------------MFGLMVDEG---IGLDEVTFSTXXXXXX 298
E +FG M+ I +E TF +
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCF 358
H + ++ +L+D Y ++G + ++ +F+QI V +
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 359 TSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES 418
+II+ A NG KQ LEM E M + P+ +T L +LT C+ S LV+ G +F+S+ S
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 419 LHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGR 478
+ I P +H+ C+V P D + +LL +C++H N +G
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 479 RAAKILLGLDPEDFAVHLQVSNFYSETGEFEASMQIKEIAIARKMTKEIGHSLI 532
K L+GL P+ ++ +S F + + + ++++ I + K +S++
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 38/276 (13%)
Query: 51 WNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVI 110
+N ++R + G + L L+ + +V+ N L+F LI+ + G LHG +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 111 KVGWVDTNIFVANALVDFYSACGCLSEAKK------------------------------ 140
K G++ + FV + V FY G L ++K
Sbjct: 114 KRGFL-WDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 141 -SFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM---QFWGKKPSIRSFVGFLNLSS 196
FQ +P+ DV+SW ++++ ++ GL AL + M + P+ +FV L+ +
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 197 K--TGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC 254
G G QIH V+ + + +AL+DMYGK GD++ A++ ++ + +
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIIL-TTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 255 CNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
N+++++L G EMF +M + + +T
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITL 327
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 144/323 (44%), Gaps = 46/323 (14%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDE-------------------- 42
++H +A+K GF ++ ++ +S V Y +G ++ + K+FD+
Sbjct: 107 ALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNG 166
Query: 43 -----------LPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDN---VELNGLSFCY 88
+P ++ +W V+ GF + GL + L ++ E+ + + N +F
Sbjct: 167 EMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVS 226
Query: 89 LIRGCSNKRFFDEG-----SQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQ 143
++ C+N FD+G Q+HG+V+ + T + AL+D Y G L A F
Sbjct: 227 VLSSCAN---FDQGGIRLGKQIHGYVMSKEIILTTT-LGTALLDMYGKAGDLEMALTIFD 282
Query: 144 AIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALF 203
I + V +WN+++S A NG ALE+ +M+ P+ + + L +++
Sbjct: 283 QIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDL 342
Query: 204 GMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLL 263
G+Q+ + + ++D+ G+ G + +A + +SLP E S++ +LL
Sbjct: 343 GIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLP---FEPDASVLGALL 399
Query: 264 HCGIVDDVFEMFGLMVDEGIGLD 286
+ + E+ + + IGL
Sbjct: 400 GACKIHENTELGNTVGKQLIGLQ 422
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 166/390 (42%), Gaps = 34/390 (8%)
Query: 128 FYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRS 187
Y G L A+ F + +++++WNS++S + L DA L+ M+ G KP +
Sbjct: 1 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 60
Query: 188 FVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESL 247
+ + + G + + + + G V +A+ K G+ +NA+
Sbjct: 61 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS-WTAIFSGCSKNGNFRNAL------ 113
Query: 248 PMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXX 307
++F M +EG+G + T ST
Sbjct: 114 -------------------------KVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK 148
Query: 308 XXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAW 367
C ++ D V+ +L+D Y +SG + + ++F I ++ + ++ G+A
Sbjct: 149 EVHGFC--LRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAM 206
Query: 368 NGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRD 427
G G++ + M+ G++PD +TF VL+ C +SGLV+EG F+ M S +GI P +
Sbjct: 207 FGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIE 266
Query: 428 HFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGL 487
H SCMV + D +W + L SC++HR+ + A K L L
Sbjct: 267 HCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVL 326
Query: 488 DPEDFAVHLQVSNFYSETGEFEASMQIKEI 517
+P + A ++ + N YS +E +I+ +
Sbjct: 327 EPHNSANYMMMINLYSNLNRWEDVERIRNL 356
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 7 RAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPER----NLATWNLVLRGFCELG 62
R K G + +SL Y LG + AL + ++ E+ N+ +W + G + G
Sbjct: 48 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 107
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
F L ++ +++ + V N + L++ G ++HG ++ + + +VA
Sbjct: 108 NFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI-CDAYVA 166
Query: 123 NALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
ALVD Y G L A + F I + + SWN ML YA G + + +M G +
Sbjct: 167 TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGME 226
Query: 183 PSIRSFVGFLNLSSKTG 199
P +F L++ +G
Sbjct: 227 PDAITFTSVLSVCKNSG 243
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
+ Y+ ++LV +Y + G + A+++F + ++LA+WN +L G+ G +E + ++ +
Sbjct: 162 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 221
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
+E + ++F ++ C N EG + + + I + +VD G L
Sbjct: 222 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 281
Query: 136 SEAKKSFQAIPME-DVLSWNSMLS 158
EA Q + ++ D W + LS
Sbjct: 282 DEAWDFIQTMSLKPDATIWGAFLS 305
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 198/464 (42%), Gaps = 60/464 (12%)
Query: 7 RAIKLGFGFNLYIGSS-LVGLYMRLGLIDLALKLFDELPER-----NLATWNLVLRGFCE 60
+ +K+GF + +IG+S L+G L L D ALK+FD + + N ++++++ G CE
Sbjct: 220 KILKIGFVLDSHIGTSLLLGFCRGLNLRD-ALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIF 120
+G +E GL +++ + + ++ LI+ ++ D+ L +I G N+
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC-KPNVH 337
Query: 121 VANALVDFYSACGCLSEA----KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIM 176
L+D G + EA +K + V+++N++++ Y +G + A ELL +M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 177 QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNG---SVHVQSALIDMYGK 233
+ KP++R+F + + G + + +K DNG + + LID +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHL----LKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 234 CGDIKNAVSTYESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVT 289
G + A S+ +E +++ + G D GLM+ +GI LDEVT
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513
Query: 290 FST----------------------XXXXXXXXXXXXXXXXXXXHCCAIK---------- 317
+T C +K
Sbjct: 514 GTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKIN 573
Query: 318 -LGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIINGFAWNGLGK 372
LG V +L+D +RSG + S ++ E + LPNV+ +T IING G +
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVE 633
Query: 373 QCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
+ ++L AM G+ P+ VT+ ++ G ++G ++ +M
Sbjct: 634 EAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 167/380 (43%), Gaps = 42/380 (11%)
Query: 88 YLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPM 147
Y +R CSN F + Q+H +IK + + V L+ S+ G A F +
Sbjct: 25 YFLRTCSN---FSQLKQIHTKIIKHNLTNDQLLV-RQLISVSSSFGETQYASLVFNQLQS 80
Query: 148 EDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS--KTGNALFGM 205
+WN M+ + N +AL LL+I+ + F + + + + G
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREAL-LLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGT 139
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCG------------------------------ 235
Q+H IK GF N V Q+ L+D+Y KCG
Sbjct: 140 QVHGLAIKAGFFN-DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSN 198
Query: 236 -DIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXX 294
+ +A + +PM ++ +++T+ + D+ F++F M + + +E F+
Sbjct: 199 SQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNE--FTIVN 256
Query: 295 XXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPN 354
H A K G+ D + +LID Y + G + ++KVF+ + +
Sbjct: 257 LLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKS 316
Query: 355 VFCFTSIINGFAWNGLGKQCLEMLEAMIRKG-LKPDRVTFLCVLTGCSHSGLVEEGRLVF 413
+ + S+I +G G++ L + E M + ++PD +TF+ VL+ C+++G V++G F
Sbjct: 317 LATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYF 376
Query: 414 NSMESLHGISPDRDHFSCMV 433
M ++GISP R+H +CM+
Sbjct: 377 TRMIQVYGISPIREHNACMI 396
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 35/320 (10%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGL 63
+H + IK + + L+ + G A +F++L + TWNL++R
Sbjct: 39 IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHK 98
Query: 64 FDELLGLYNEIKLDN-VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
E L L+ + + + + + +F ++I+ C G+Q+HG IK G+ + ++F
Sbjct: 99 PREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFN-DVFFQ 157
Query: 123 NALVDFYSACG-------------------------------CLSEAKKSFQAIPMEDVL 151
N L+D Y CG L A+ F +PM +V+
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 152 SWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCV 211
SW +M++ Y N +A +L MQ KP+ + V L S++ G+ G +H
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 212 IKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDV 271
K GF + +ALIDMY KCG +++A ++ + SL NS++TSL G ++
Sbjct: 278 HKNGF-VLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 272 FEMFGLMVDEG-IGLDEVTF 290
+F M +E + D +TF
Sbjct: 337 LSLFEEMEEEASVEPDAITF 356
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRG------ 57
VH AIK GF +++ ++L+ LY + G D K+FD++P R++ +W +L G
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 58 -------FCELGLF------------------DELLGLYNEIKLDNVELNGLSFCYLIRG 92
F ++ + DE L+ +++D+V+ N + L++
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 93 CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLS 152
+ G +H + K G+V + F+ AL+D YS CG L +A+K F + + + +
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFV-LDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLAT 319
Query: 153 WNSMLSVYADNGLFLDALELLYIMQFWGK-KPSIRSFVGFLNLSSKTGNALFGMQIHCCV 211
WNSM++ +G +AL L M+ +P +FVG L+ + TGN G++ +
Sbjct: 320 WNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRM 379
Query: 212 IKM 214
I++
Sbjct: 380 IQV 382
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 150/371 (40%), Gaps = 44/371 (11%)
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P +F L + G + H ++ G D V+++L++MY CGD+++A
Sbjct: 60 PDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPF-VRTSLLNMYSSCGDLRSAQR 118
Query: 243 TYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGI------------------G 284
++ L NS++ + G++DD ++F M + +
Sbjct: 119 VFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEA 178
Query: 285 LD------------------EVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSV 326
LD E T ST H K E D+ +
Sbjct: 179 LDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWV--HAYIDKYHVEIDIVL 236
Query: 327 SCSLIDAYLRSGHVLLSQKVFEQI-PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK- 384
+LID Y + G + +++VF + +V ++++I A GL +C ++ M
Sbjct: 237 GTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD 296
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXX 444
+ P+ VTF+ +L C H GL+ EG+ F M GI+P H+ CMV
Sbjct: 297 NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 445 XXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSE 504
P D ++W SLL R+ + A K L+ LDP + ++ +SN Y++
Sbjct: 357 AESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAK 416
Query: 505 TGEFEASMQIK 515
TG + M++K
Sbjct: 417 TGRW---MEVK 424
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 8/241 (3%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
+L +S+V Y + GLID A KLFDE+PERN+ +W+ ++ G+ G + E L L+ E++
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 76 LDN-----VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYS 130
L V N + ++ C ++G +H ++ K V+ +I + AL+D Y+
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYH-VEIDIVLGTALIDMYA 245
Query: 131 ACGCLSEAKKSFQAI-PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK-KPSIRSF 188
CG L AK+ F A+ +DV ++++M+ A GL + +L M P+ +F
Sbjct: 246 KCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTF 305
Query: 189 VGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
VG L G G +I+ S+ ++D+YG+ G IK A S S+P
Sbjct: 306 VGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP 365
Query: 249 M 249
M
Sbjct: 366 M 366
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 152/374 (40%), Gaps = 45/374 (12%)
Query: 51 WNLVLRGFCE---LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHG 107
WN+++R + +Y ++ V + +F +L+ N G + H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 108 HVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGL-- 165
++ G +D + FV +L++ YS+CG L A++ F +D+ +WNS+++ YA GL
Sbjct: 87 QILLFG-LDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 166 -----------------------------FLDALELLYIMQFWGK-----KPSIRSFVGF 191
+ +AL+L MQ +P+ +
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 192 LNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESL-PMT 250
L+ + G G +H + K + V + +ALIDMY KCG ++ A + +L
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIV-LGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 251 SLECCNSLMTSLLHCGIVDDVFEMFGLM-VDEGIGLDEVTFSTXXXXXXXXXXXXXXXXX 309
++ ++++ L G+ D+ F++F M + I + VTF
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324
Query: 310 XXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL-PNVFCFTSIINGFAWN 368
+ G + ++D Y RSG + ++ +P+ P+V + S+++G
Sbjct: 325 FKMMIE-EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 369 GLGKQCLEMLEAMI 382
G K C L+ +I
Sbjct: 384 GDIKTCEGALKRLI 397
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 4 VHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDEL-PERNLATWNLVLRGFCELG 62
VH K ++ +G++L+ +Y + G ++ A ++F+ L ++++ ++ ++ G
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
Query: 63 LFDELLGLYNEIKL-DNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
L DE L++E+ DN+ N ++F ++ C ++ +EG +I+ + +I
Sbjct: 281 LTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQH 340
Query: 122 ANALVDFYSACGCLSEAKKSFQAIPME-DVLSWNSMLS 158
+VD Y G + EA+ ++PME DVL W S+LS
Sbjct: 341 YGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 378
>AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11394744-11395973 REVERSE
Length = 409
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 132/269 (49%), Gaps = 10/269 (3%)
Query: 23 LVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELN 82
L+ +++ G +D+ ++FD +P R+ +W +V G E+G +++ L+ + L + +
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSM-LKHSQKG 187
Query: 83 GLSFCYLIRGCSNK-----RFFDEGSQLHGHVIKVGWVD-TNIFVANALVDFYSACGCLS 136
I GC K R F+ G Q+H K+G++D + +++ +L+ FY CL
Sbjct: 188 AFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLE 247
Query: 137 EAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS 196
+A + + ++W + ++ G F + + M G K ++ F L S
Sbjct: 248 DANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS 307
Query: 197 KTGN-ALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP-MTSLEC 254
+ G Q+H IK+GF++ + ++ LI+MYGK G +K+A ++S TS+ C
Sbjct: 308 WVSDGGRSGQQVHANAIKLGFESDCL-IRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSC 366
Query: 255 CNSLMTSLLHCGIVDDVFEMFGLMVDEGI 283
N+++ S + GI + ++ M GI
Sbjct: 367 WNAMVASYMQNGIYIEAIKLLYQMKATGI 395
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 137/321 (42%), Gaps = 10/321 (3%)
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDE--GSQLHGHVIKVGWVDTNIFVANALVDFYSACG 133
+D++ L G Y + R D+ +L H++K T F+ N L+ + +CG
Sbjct: 79 MDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFI-NRLLLMHVSCG 137
Query: 134 CLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPS--IRSFV-- 189
L ++ F +P D SW + + G + DA L M +K + I S++
Sbjct: 138 RLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILG 197
Query: 190 GFLNLSSKTGNALFGMQIHCCVIKMGF-DNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
L + + G Q+H K+GF D ++ +LI YG+ +++A L
Sbjct: 198 CVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLS 257
Query: 249 MTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXX 308
+ + +T+ G +V F M + GI + FS
Sbjct: 258 NANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQ 317
Query: 309 XXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP-LPNVFCFTSIINGFAW 367
H AIKLG+ESD + C LI+ Y + G V ++KVF+ +V C+ +++ +
Sbjct: 318 QV-HANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQ 376
Query: 368 NGLGKQCLEMLEAMIRKGLKP 388
NG+ + +++L M G+K
Sbjct: 377 NGIYIEAIKLLYQMKATGIKA 397
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 3 SVHCRAIKLGF--GFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCE 60
VH KLGF + Y+ SL+ Y ++ A + +L N W +
Sbjct: 214 QVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYR 273
Query: 61 LGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCS-NKRFFDEGSQLHGHVIKVGWVDTNI 119
G F E++ + E+ ++ N F +++ CS G Q+H + IK+G+ +++
Sbjct: 274 EGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGF-ESDC 332
Query: 120 FVANALVDFYSACGCLSEAKKSFQAIPMEDVLS-WNSMLSVYADNGLFLDALELLYIMQF 178
+ L++ Y G + +A+K F++ E +S WN+M++ Y NG++++A++LLY M+
Sbjct: 333 LIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKA 392
Query: 179 WGKKP 183
G K
Sbjct: 393 TGIKA 397
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 184/440 (41%), Gaps = 24/440 (5%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPE----RNLATWNLVLRGFCELGL-FDE 66
GF ++Y +SL+ + G A+ +F ++ E L T+N++L F ++G +++
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 67 LLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALV 126
+ L ++K D + + ++ LI C E +Q+ + G+ + NAL+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV-TYNALL 321
Query: 127 DFYSACGCLSEAKKSFQAIPM----EDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
D Y EA K + + ++++NS++S YA +G+ +A+EL M G K
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P + ++ L+ + G M I + G ++ +A I MYG G +
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC-KPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 243 TYESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
++ + + L N+L+ G+ +V +F M G + TF+T
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPN 354
+ G D+S +++ A R G S+KV ++ PN
Sbjct: 501 RCGSFEQAMTVYRRM--LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 355 VFCFTSIINGFAWNGLGKQCLEMLEAMIRKG-LKPDRVTFLCVLTGCSHSGLVEEGRLVF 413
+ S+++ +A NG + L + G ++P V ++ CS L+ E F
Sbjct: 559 ELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 414 NSMESLHGISPDRDHFSCMV 433
+ ++ G SPD + MV
Sbjct: 618 SELKE-RGFSPDITTLNSMV 636
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 117/272 (43%), Gaps = 29/272 (10%)
Query: 10 KLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPE----RNLATWNLVLRGFCELGLFD 65
+ GF ++L+ Y R G + A+ ++ + + +L+T+N VL G+++
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 66 ELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKV--GWVDTNIFVAN 123
+ + E++ + N L++C L+ +N + E +H +V G ++ +
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGK---EIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 124 ALVDFYSACGCLSEAKKSFQAIPME----DVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
LV S C L EA+++F + D+ + NSM+S+Y + A +L M+
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
G PS+ ++ + + S++ + +I ++ G + + + Y C +
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI---YAYCRN--- 712
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHCGIVDDV 271
T + + + + + + GIV DV
Sbjct: 713 ----------TRMRDASRIFSEMRNSGIVPDV 734
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 186/436 (42%), Gaps = 28/436 (6%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDEL------PERNLATWNLVLRGFCELGLFDELLG 69
N I +L+ + ++ AL+L +E+ P+ T+N V+ G C+ +E
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE--TFNDVILGLCKFDRINEAAK 308
Query: 70 LYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNI----FVANAL 125
+ N + + + +++ YL+ G D L + K V N FV +
Sbjct: 309 MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGR 368
Query: 126 VDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSI 185
+D A LS+ S+ +P DV ++NS++ Y GL ALE+L+ M+ G KP++
Sbjct: 369 LD--DAKAVLSDMVTSYGIVP--DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 186 RSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYE 245
S+ ++ K G + + G +V + LI + K I AV +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF-NCLISAFCKEHRIPEAVEIFR 483
Query: 246 SLPM----TSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXX 301
+P + NSL++ L + + M+ EG+ + VT++T
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 302 XXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQI----PLPNVFC 357
+ G D SLI R+G V ++ +FE++ P+
Sbjct: 544 EIKEARKLVNE--MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 358 FTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSME 417
+ING +G+ ++ +E + M+ +G PD VTF ++ G +G +E+G +F ++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 418 SLHGISPDRDHFSCMV 433
+ GI PD F+ ++
Sbjct: 662 A-EGIPPDTVTFNTLM 676
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 193/447 (43%), Gaps = 64/447 (14%)
Query: 7 RAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDEL----PERNLATWNLVLRGFCELG 62
+A+ G ++ + SS + +Y++ G + A ++ + N+ T+ ++++G C+ G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRG---CSNKRFFDEGSQLHGHVIKVGWVDTNI 119
E G+Y +I +E + +++ LI G C N R G L+ +IK+G+ ++
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR---SGFALYEDMIKMGY-PPDV 461
Query: 120 FVANALVDFYSACGCLSEA-----KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLY 174
+ LVD S G + A K Q+I + +V+ +NS++ + F +AL++
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL-NVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 175 IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
+M +G KP + +F + +S G + + + KMG + ++ LID + K
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL-AYCTLIDAFCKH 579
Query: 235 GDIKNAVSTYESLPMTSLEC----CNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ ++ + + CN ++ L C ++D + F +++ + D VT+
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 291 STXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQI 350
+T GY CSL + ++++FE +
Sbjct: 640 NTMI-----------------------CGY-------CSL-------RRLDEAERIFELL 662
Query: 351 PL----PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLV 406
+ PN T +I+ N + M M KG KP+ VT+ C++ S S +
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 722
Query: 407 EEGRLVFNSMESLHGISPDRDHFSCMV 433
E +F M+ GISP +S ++
Sbjct: 723 EGSFKLFEEMQE-KGISPSIVSYSIII 748
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 123/288 (42%), Gaps = 12/288 (4%)
Query: 146 PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGM 205
P +V+++ ++++ + G A +L +M+ G +P + ++ ++ K G G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE----CCNSLMTS 261
++ + G V V S+ ID+Y K GD+ A Y+ + + L+
Sbjct: 342 KLFSQALHKGV-KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 262 LLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYE 321
L G + + F M+G ++ G+ VT+S+ IK+GY
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED--MIKMGYP 458
Query: 322 SDVSVSCSLIDAYLRSGHVL----LSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEM 377
DV + L+D + G +L S K+ Q NV F S+I+G+ + L++
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 378 LEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPD 425
M G+KPD TF V+ G +EE +F M + G+ PD
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM-GLEPD 565
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 19/223 (8%)
Query: 207 IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCG 266
+ C + G + V S L+ + CG N V+ C +L+ G
Sbjct: 253 VSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTF-----------C-TLINGFCKRG 300
Query: 267 IVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSV 326
+D F++F +M GI D + +ST A+ G + DV V
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ--ALHKGVKLDVVV 358
Query: 327 SCSLIDAYLRSGHVLLSQKVFEQI----PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
S ID Y++SG + + V++++ PNV +T +I G +G + M ++
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 383 RKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPD 425
++G++P VT+ ++ G G + G ++ M + G PD
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM-GYPPD 460
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 171/395 (43%), Gaps = 53/395 (13%)
Query: 31 GLIDLALKLFDELPER----NLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSF 86
G ID+AL LFD++ + N+ T+N ++ G+C+L D+ L + L +E N +S+
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 87 CYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA----KKSF 142
+I G + E S + + + G+ + N L+ Y G +A +
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV-TYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 143 QAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNAL 202
+ V+++ S++ G A+E L M+ G P+ R++ ++ S+ G
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY-- 395
Query: 203 FGMQIHCCVIKMGFDNG---SVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE----CC 255
M V++ DNG SV +ALI+ + G +++A++ E + L
Sbjct: 396 --MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
+++++ VD+ + MV++GI D +T+S+ C
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF----------------CE 497
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCL 375
+ E+ C L + LR G +P P+ F +T++IN + G ++ L
Sbjct: 498 QRRTKEA-----CDLYEEMLRVG-----------LP-PDEFTYTALINAYCMEGDLEKAL 540
Query: 376 EMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
++ M+ KG+ PD VT+ ++ G + E +
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 128/303 (42%), Gaps = 17/303 (5%)
Query: 225 SALIDMYGKCGDIKNAVSTYESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVD 280
+ LID Y K I + S+ + LE N ++ L G + +V + M
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 281 EGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHV 340
G LDEVT++T H ++ G V SLI + ++G++
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVM--HAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 341 LLSQKVFEQIPL----PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCV 396
+ + +Q+ + PN +T++++GF+ G + +L M G P VT+ +
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 397 LTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRG 456
+ G +G +E+ V M+ G+SPD +S ++ + +G
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKE-KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 457 ---DCVMWSSLLRS-CRVHRNETVGRRAAKIL-LGLDPEDFAVHLQVSNFYSETGEFEAS 511
D + +SSL++ C R + ++L +GL P++F + + N Y G+ E +
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT-YTALINAYCMEGDLEKA 539
Query: 512 MQI 514
+Q+
Sbjct: 540 LQL 542
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/449 (20%), Positives = 180/449 (40%), Gaps = 59/449 (13%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRG 57
N + ++ G + + +SL+ Y + +D A K+F+E+P RN + ++ G
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 58 FCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDT 117
C DE + L+ ++K D ++ LI+ E L + + G +
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG-IKP 356
Query: 118 NIFVANALVDFYSACGCLSEAK----KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL 173
NI L+D + +A+ + + M +V+++N++++ Y G+ DA++++
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 174 YIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGK 233
+M+ P+ R++ + G+ +VH K
Sbjct: 417 ELMESRKLSPNTRTYNELIK---------------------GYCKSNVH----------K 445
Query: 234 CGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTX 293
+ N + + LP + NSL+ G D + + LM D G+ D+ T+++
Sbjct: 446 AMGVLNKMLERKVLP--DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 294 XXXXXXXXXXXXXXXXXXHCCAI-----KLGYESDVSVSCSLIDAYLRSGHV----LLSQ 344
C + + G +V + +LID Y ++G V L+ +
Sbjct: 504 IDSLCKSKRVE-------EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 345 KVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSG 404
K+ + LPN F ++I+G +G K+ + E M++ GL+P T ++ G
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 405 LVEEGRLVFNSMESLHGISPDRDHFSCMV 433
+ F M S G PD ++ +
Sbjct: 617 DFDHAYSRFQQMLS-SGTKPDAHTYTTFI 644
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 167/395 (42%), Gaps = 29/395 (7%)
Query: 26 LYMRLGLIDLA---LKLFDELP-ERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVEL 81
L+ + G +D A LK+ ++ E N+ +N ++ C + D +++E+ +E
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 82 NGLSFCYLIRGCSNKRFFDEGSQLHG----HVIKVGWVDTNIFVANALVDFYSACGCLSE 137
N ++ LI G FF + + + + + N + N +++ G S+
Sbjct: 518 NNFTYSILIDG-----FFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 138 AKKSFQAIPMEDV-----LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFL 192
AK+ Q + E S+NS++ + G A+E M GK P++ +F +
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 193 NLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP---- 248
N K+ +++ + M + ALID + K D+K A + + LP
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMEL-KLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 249 MTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXX 308
M ++ NSL++ + G +D +++ MV++GI D T++T
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD 751
Query: 309 XXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIING 364
+ LG D + L++ + G L + K+ E++ PNV ++++I G
Sbjct: 752 LYSEL--LDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Query: 365 FAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTG 399
G + + + M+ KG+ D F +++G
Sbjct: 810 HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 183/422 (43%), Gaps = 35/422 (8%)
Query: 33 IDLALKLFDELPERNLATWNLVLRGFCELGLFD---------ELLGLYNEIKLDNVELNG 83
IDL + P ++ +N +L +L +D E+LG+ N++ N+ +N
Sbjct: 70 IDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINC 129
Query: 84 LSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA----K 139
C+ + + G ++K+G+ + + +LV+ + +S+A
Sbjct: 130 FCCCFQV---------SLALSILGKMLKLGYEPDRVTIG-SLVNGFCRRNRVSDAVSLVD 179
Query: 140 KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
K + D++++N+++ DA + ++ G +P++ ++ +N +
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE----CC 255
++ +IK +V SAL+D + K G + A +E + S++
Sbjct: 240 RWSDAARLLSDMIKKKI-TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
+SL+ L +D+ +MF LMV +G D V+++T
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS- 357
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLG 371
+ G S+ +LI + ++G V +Q+ F Q+ P+++ + ++ G NG
Sbjct: 358 -QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSC 431
++ L + E M ++ + D VT+ V+ G +G VEE +F S+ SL G+ PD ++
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTT 475
Query: 432 MV 433
M+
Sbjct: 476 MM 477
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 163/406 (40%), Gaps = 69/406 (16%)
Query: 11 LGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPER----NLATWNLVLRGFCELGLFDE 66
LG N+Y + + + R G I+ A ++ + + ++ T+ +++ C D
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 67 LLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALV 126
++ ++K + + +++ L+ S+ R D Q + K G V ++ LV
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTILV 370
Query: 127 DFYSACGCLSEAKKSFQAIPMEDVL----SWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
D G EA + + + +L ++N+++ DALEL M+ G K
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 183 PSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVS 242
P+ +++ F ID YGK GD +A+
Sbjct: 431 PTAYTYIVF------------------------------------IDYYGKSGDSVSALE 454
Query: 243 TYESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
T+E + + CN+ + SL G + ++F + D G+ D VT++
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 299 XXXXXXXXXXXXXHCCAIKL-------GYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP 351
AIKL G E DV V SLI+ ++ V + K+F ++
Sbjct: 515 KVGEIDE---------AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 352 ----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTF 393
P V + +++ G NG ++ +E+ E M++KG P+ +TF
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 95/224 (42%), Gaps = 15/224 (6%)
Query: 221 VHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC------CNSLMTSLLHCGIVDDVFEM 274
V + L+D YGK G I Y+ M++ EC N +++ L+ G VDD ++
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKE--MSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 275 F-GLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDA 333
+ LM D T+ + G + ++ LI+
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG--MLDYGCRPNCAIYNILING 935
Query: 334 YLRSGHV----LLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPD 389
+ ++G L +++ ++ P++ ++ +++ G + L + + GL PD
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 390 RVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
V + ++ G S +EE ++FN M++ GI+PD ++ ++
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 181/438 (41%), Gaps = 19/438 (4%)
Query: 11 LGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELGLFDE 66
LG NLY S L+ + R + LAL + ++ E ++ T N +L GFC +
Sbjct: 110 LGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISD 169
Query: 67 LLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVD---TNIFVAN 123
+ L ++ + + +F LI G E L ++ G T V N
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
L LS KK Q V+ +N+++ + DAL L M G +P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
++ ++ + G ++ +I+ N +V SALID + K G + A
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 244 YESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
Y+ + S++ +SL+ +D+ MF LM+ + + VT++T
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNV 355
+ G + +LI + ++ +Q VF+Q+ LP++
Sbjct: 409 AKRVDEGMELFREMS--QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 356 FCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNS 415
++ +++G NG + L + E + R ++PD T+ ++ G +G VE+G +F S
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 416 MESLHGISPDRDHFSCMV 433
+ SL G+ P+ ++ M+
Sbjct: 527 L-SLKGVKPNVVTYTTMM 543
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 172/409 (42%), Gaps = 51/409 (12%)
Query: 29 RLGLIDLALKLFDELPERNL----ATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGL 84
+ G ++ K++ E+ RN+ T+N+++ GF + G +E + +++ +
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 85 SFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDT----NIFVANALVDFYSACGCLSEAKK 140
SF LI G + FD+ + ++ G T NI++ AL DF G + +A++
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYIC-ALCDF----GRIDDARE 364
Query: 141 SFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGN 200
++ DV+S+N+++ Y G F++A L ++ PSI ++ ++ ++GN
Sbjct: 365 LLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 201 ALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMT 260
L G Q +K ++T P + +L+
Sbjct: 425 -LEGAQ-----------------------------RLKEEMTTQLIFP--DVITYTTLVK 452
Query: 261 SLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGY 320
+ G + E++ M+ +GI D ++T A +
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD-HH 511
Query: 321 ESDVSVSCSLIDAYLRSGHVL----LSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLE 376
D+++ ID + G+++ +K+F +P+ +T++I G+ NG K
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 571
Query: 377 MLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPD 425
+ + M+RK L P +T+ ++ G + +G +E+ M+ G+ P+
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKK-RGVRPN 619
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 163/391 (41%), Gaps = 20/391 (5%)
Query: 50 TWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHV 109
T+ ++ G C+ G DE + L NE+ D ++ + +++ LI G F ++ +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 110 IKVGWVDTNIFVANALVDFYSAC--GCLSEAKKSFQAIPME----DVLSWNSMLSVYADN 163
+VG I + + Y+ C GCL EA + ++A+ +E D ++N +++
Sbjct: 465 YRVGLSPNGIIYSTLI---YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 521
Query: 164 GLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHV 223
G +A E + M G P+ SF +N +G L + + K+G + +
Sbjct: 522 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG-HHPTFFT 580
Query: 224 QSALIDMYGKCGDIKNAVSTYESLPMTSLEC----CNSLMTSLLHCGIVDDVFEMFGLMV 279
+L+ K G ++ A +SL N+L+T++ G + +FG MV
Sbjct: 581 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 640
Query: 280 DEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGH 339
I D T+++ A + V +C +D ++G
Sbjct: 641 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC-FVDGMFKAGQ 699
Query: 340 VLLSQKVFEQIP----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLC 395
EQ+ P++ ++I+G++ G ++ ++L M + P+ T+
Sbjct: 700 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 759
Query: 396 VLTGCSHSGLVEEGRLVFNSMESLHGISPDR 426
+L G S V L++ S+ L+GI PD+
Sbjct: 760 LLHGYSKRKDVSTSFLLYRSI-ILNGILPDK 789
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/475 (18%), Positives = 182/475 (38%), Gaps = 55/475 (11%)
Query: 10 KLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPER----NLATWNLVLRGFCELGLFD 65
K G+ + ++++ Y + G A++L D + + ++ T+N+++ C
Sbjct: 221 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280
Query: 66 ELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANAL 125
+ L +++ + N +++ LI G SN+ SQL ++ G + N NAL
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG-LSPNHVTFNAL 339
Query: 126 VDFYSACGCLSEAKKSFQAIPMEDV----------------------------------- 150
+D + + G EA K F + + +
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399
Query: 151 ----LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQ 206
+++ M+ NG +A+ LL M G P I ++ +N K G +
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 459
Query: 207 IHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE----CCNSLMTSL 262
I C + ++G + + S LI + G +K A+ YE++ + N L+TSL
Sbjct: 460 IVCRIYRVGLSPNGI-IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 518
Query: 263 LHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYES 322
G V + E M +GI + V+F K+G+
Sbjct: 519 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE--MTKVGHHP 576
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQI-PLP---NVFCFTSIINGFAWNGLGKQCLEML 378
SL+ + GH+ ++K + + +P + + +++ +G + + +
Sbjct: 577 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 636
Query: 379 EAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
M+++ + PD T+ +++G G L E+ + P++ ++C V
Sbjct: 637 GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 691
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 114/278 (41%), Gaps = 43/278 (15%)
Query: 153 WNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVI 212
++ ++ VY G+ D+LE+ +M +G PS+ T NA+ G V+
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY-----------TCNAILG-----SVV 169
Query: 213 KMGFDNGSVHVQSALIDMYGK--CGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDD 270
K G D V V S L +M + C D V+T+ N L+ L G +
Sbjct: 170 KSGED---VSVWSFLKEMLKRKICPD----VATF-----------NILINVLCAEGSFEK 211
Query: 271 VFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSL 330
+ M G VT++T H + G ++DV L
Sbjct: 212 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS--KGVDADVCTYNML 269
Query: 331 IDAYLRSGHV----LLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGL 386
I RS + LL + + +++ PN + ++INGF+ G ++L M+ GL
Sbjct: 270 IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329
Query: 387 KPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISP 424
P+ VTF ++ G G +E +F ME+ G++P
Sbjct: 330 SPNHVTFNALIDGHISEGNFKEALKMFYMMEA-KGLTP 366
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/439 (19%), Positives = 178/439 (40%), Gaps = 83/439 (18%)
Query: 7 RAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLAT----WNLVLRGFCELG 62
R ++ GF + ++ + G LAL LF ++ ERN+ +++V+ C+ G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
FD+ L L+NE+++ ++ + +++ LI G N +D+G+++ +I + ++
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII-PDVVTF 318
Query: 123 NALVDFYSACGCLSEAKKSFQAIPME----DVLSWNSMLSVYADNGLFLDALELLYIMQF 178
+AL+D + G L EAK+ + + D +++NS++ + +A ++ +M
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
G +P I ++ +N K GM++ + G I
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL--------------------IP 418
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXX 298
N + TY N+L+ G ++ E+F MV G+ VT+
Sbjct: 419 NTI-TY-----------NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI------ 460
Query: 299 XXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPN---- 354
L+D +G + + ++FE++
Sbjct: 461 -------------------------------LLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 355 VFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFN 414
+ + II+G + ++ KG+KPD VT+ ++ G G + E ++F
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 415 SMESLHGISPDRDHFSCMV 433
M+ G +PD ++ ++
Sbjct: 550 KMKE-DGCTPDDFTYNILI 567
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 188/429 (43%), Gaps = 66/429 (15%)
Query: 28 MRLGLIDL----ALKLFDELPE-RNLAT---WNLVLRGFCELGLFDELLGLYNEIKLDNV 79
+R G++D+ A+ LF+ + + R L T +N + +D +LG ++L+ +
Sbjct: 42 LRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI 101
Query: 80 ELNGLSFCYLIR-GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA 138
E + + +I C K+ S L G K+G+ + + + LV+ + G +SEA
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVL-GRAWKLGY-EPDTITFSTLVNGFCLEGRVSEA 159
Query: 139 ----KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL 194
+ + D+++ +++++ G +AL L+ M +G +P ++ LN
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 195 SSKTGNALFGMQIHCCVIKMGFDN--GSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSL 252
K+GN+ + + KM N SV S +ID K G +A+S + + M +
Sbjct: 220 LCKSGNSALALDLF---RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 253 EC----CNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXX 308
+ +SL+ L + G DD +M M+ I D VTFS
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS----------------- 319
Query: 309 XXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIING 364
+LID +++ G +L +++++ ++ P+ + S+I+G
Sbjct: 320 --------------------ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 365 FAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISP 424
F + +M + M+ KG +PD VT+ ++ + V++G +F + S G+ P
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS-KGLIP 418
Query: 425 DRDHFSCMV 433
+ ++ +V
Sbjct: 419 NTITYNTLV 427
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 132/283 (46%), Gaps = 11/283 (3%)
Query: 142 FQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNA 201
Q+ P+ ++ + +L+V A F + L + M+ G + SF ++ +
Sbjct: 600 LQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRL 659
Query: 202 LFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP----MTSLECCNS 257
+ + ++K+GF S+ +L++ + + + AVS +S+ + ++ N+
Sbjct: 660 SLALALLGKMMKLGF-RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNT 718
Query: 258 LMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIK 317
++ L +++ E+F M +GI D VT++T +K
Sbjct: 719 VINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD--MVK 776
Query: 318 LGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQI----PLPNVFCFTSIINGFAWNGLGKQ 373
+ +V +LID +++ G++L ++ +++++ +PNVF + S+INGF +G
Sbjct: 777 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 836
Query: 374 CLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
M + M+ KG PD VT+ ++TG S VE+G +F M
Sbjct: 837 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 879
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 186/459 (40%), Gaps = 66/459 (14%)
Query: 34 DLALKLFDEL----PERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYL 89
D A LF E+ P ++ + VL ++ FD ++ LY++++ + + SF L
Sbjct: 590 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 649
Query: 90 IRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDF-----YSACGCLSEAKKSFQA 144
I L G ++K+G+ + + + + L F + L ++ F
Sbjct: 650 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 709
Query: 145 IPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFG 204
+P +V+ +N++++ N +ALE+ Y M+ G + ++ ++ S +G
Sbjct: 710 VP--NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 767
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE----CCNSLMT 260
++ ++K D + +ALID + K G++ A + Y+ + S+ NSL+
Sbjct: 768 ARLLRDMVKRKIDPNVIFF-TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 826
Query: 261 SLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGY 320
G + D MF LMV +G D VT++T C G
Sbjct: 827 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL--FCEMTYQGL 884
Query: 321 ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIINGFAWNGLGKQCLE 376
D +LI Y ++G + ++QKVF ++ P++ + +++ NG ++ L
Sbjct: 885 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 944
Query: 377 MLE-----------------------------------AMIRKGLKPDRVTFLCVLTGCS 401
M+E ++ RKG+KPD + ++ +++G
Sbjct: 945 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 1004
Query: 402 HSGLVEEGRLVFNSMESLHGISPD--------RDHFSCM 432
GL E + M+ G P RDH++ +
Sbjct: 1005 RKGLQREADKLCRRMKE-DGFMPSERIYDETLRDHYTSL 1042
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 125/291 (42%), Gaps = 18/291 (6%)
Query: 146 PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGM 205
P+ ++ + +L+ A+ + + M+ +G + SF ++ + F +
Sbjct: 67 PLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFAL 126
Query: 206 QIHCCVIKMGFDNGSVHVQSAL--IDMYGKCGDIKNAV-----STYESLPMTSLECCNSL 258
+ ++K+G++ V S L + + GD + V S YE ++ N+L
Sbjct: 127 SVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP----NVVVYNTL 182
Query: 259 MTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKL 318
+ L G ++ E+ M +G+G D VT++T +K
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD--MMKR 240
Query: 319 GYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLGKQC 374
DV +LID +++ G++ +Q++++++ PN + SIING +G
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 375 LEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPD 425
+ + M KG P+ VT+ +++G +V+EG +F M S G + D
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM-SCEGFNAD 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 157/383 (40%), Gaps = 16/383 (4%)
Query: 47 NLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRG-CSNKRFFDEGSQL 105
+L ++ +++ FC L + ++ E + ++F L+ G C R D S L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS-L 163
Query: 106 HGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME----DVLSWNSMLSVYA 161
++K G+ + N+ V N L+D G L+ A + + + DV+++N++L+
Sbjct: 164 VILMVKSGY-EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 162 DNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSV 221
+G + DA +L M P + +F +++ K GN +++ +I+ D +V
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 222 HVQSAL--IDMYGKCGDIKNAVSTYESLP-MTSLECCNSLMTSLLHCGIVDDVFEMFGLM 278
S + + M+G+ D K S ++ N+L++ +VD+ ++F M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 279 VDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSG 338
EG D T++T C + D+ C L+ +G
Sbjct: 343 SCEGFNADIFTYNT--LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 339 HVLLSQKVFEQI----PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFL 394
+ + F+ + + + +I+G ++ E+ + +G+KPD T+
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 395 CVLTGCSHSGLVEEGRLVFNSME 417
++ G +G E + M+
Sbjct: 461 IMILGLCKNGPRREADELIRRMK 483
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 316 IKLGYESDVSVSCSLIDAYL---RSGH-----VLLSQKVFEQIPLPNVFCFTSIINGFAW 367
+KLGYE + SL+ + R G +L+ + +E PNV + ++I+G
Sbjct: 133 MKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE----PNVVVYNTLIDGLCK 188
Query: 368 NGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRD 427
NG LE+L M +KGL D VT+ +LTG +SG + + M I+PD
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK-RSINPDVV 247
Query: 428 HFSCMV 433
F+ ++
Sbjct: 248 TFTALI 253
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/473 (20%), Positives = 185/473 (39%), Gaps = 68/473 (14%)
Query: 13 FGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLA----TWNLVLRGFCELGLFDELL 68
F +N+ + + L R D+A LFDE+ +R LA T++ ++ F + G+FD L
Sbjct: 156 FAYNVVLRNVL-----RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 69 GLYNEIKLDNVELNGLSFCYLI----RGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANA 124
+++ D V + + + LI R C + S+L K + ++ N+
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRL-----KRSGITPDLVAYNS 265
Query: 125 LVDFYSACGCLSEA----KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ--- 177
+++ Y EA K+ +A + + +S++++LSVY +N FL+AL + M+
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 178 ---------------------------FWGKK-----PSIRSFVGFLNLSSKTGNALFGM 205
FW + P++ S+ L + + LFG
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEA--ELFGE 383
Query: 206 QIHCCVIKMGFD-NGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLL- 263
IH + D +V + +I +YGK + + A + + + +E N++ S +
Sbjct: 384 AIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE-PNAITYSTII 442
Query: 264 ----HCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLG 319
G +D +F + G+ +D+V + T H +
Sbjct: 443 SIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT-MIVAYERVGLMGHAKRLLHELKLPDN 501
Query: 320 YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLE 379
+ +++ L A + ++ FE + ++ F +IN ++ N +E+ E
Sbjct: 502 IPRETAITI-LAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFE 560
Query: 380 AMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCM 432
M G PD VL E+ V+ M+ + PD HF +
Sbjct: 561 KMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 165/411 (40%), Gaps = 25/411 (6%)
Query: 23 LVGLYMRLGLIDLALKLFDELP-ERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVEL 81
++ Y + G I+ AL + D + ++ T+N +LR C+ G + + + + + +
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 82 NGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKS 141
+ +++ LI +L + G ++ N LV+ G L EA K
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT-PDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 142 FQAIP----MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSK 197
+P +V++ N +L G ++DA +LL M G PS+ +F +N +
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 198 TGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK--NAVSTYESLPMTSLECC 255
G + I + + G S+ L +G C + K A+ E M S C
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLL---HGFCKEKKMDRAIEYLER--MVSRGCY 411
Query: 256 ------NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXX 309
N+++T+L G V+D E+ + +G +T++T
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 310 XXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGF 365
A L + D SL+ R G V + K F + PN F SI+ G
Sbjct: 472 LDEMRAKDL--KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 366 AWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
+ + ++ L MI +G KP+ ++ ++ G ++ G+ +E + N +
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%)
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLG 371
H C I L DV ++I+ Y V + KVFE++P N ++ F NG G
Sbjct: 142 HECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYG 201
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSC 431
++ +++ +G KP+ F V + C+ +G V+EG L F +M +GI P +H+
Sbjct: 202 EEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHS 261
Query: 432 MVXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLD 488
+ + P +W +L+ RVH + +G R A+++ LD
Sbjct: 262 VTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 166/400 (41%), Gaps = 82/400 (20%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNL----ATWNLVLRGFCELGLFDEL 67
GF N+Y+ + L+ + + G I A K+FDE+ +R+L ++N ++ G+C++G DE
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 68 LGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVD 127
L ++++ + ++ LI + D L + K G + ++ + L+
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV-IFTTLIH 353
Query: 128 FYSACGCLSEAKKSFQAI----PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
+S G + K+S+Q + D++ +N++++ + NG + A ++ M G +P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
++ + LID + + GD++ A+
Sbjct: 414 DKITY------------------------------------TTLIDGFCRGGDVETALEI 437
Query: 244 YESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXX 303
+ + +E + + S L CG+ + G ++D L E+
Sbjct: 438 RKEMDQNGIE-LDRVGFSALVCGMCKE-----GRVIDAERALREM--------------- 476
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFT 359
++ G + D ++DA+ + G K+ +++ +P+V +
Sbjct: 477 ------------LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 360 SIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTG 399
++NG G K +L+AM+ G+ PD +T+ +L G
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 12/288 (4%)
Query: 154 NSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIK 213
++++ Y D G DA++ + + IR L+ K + ++
Sbjct: 174 DALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILD 233
Query: 214 MGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC----NSLMTSLLHCGIVD 269
GF +V+V + L++ + K G+I +A ++ + SL+ N+L+ G +D
Sbjct: 234 AGFP-LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 270 DVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCS 329
+ F + M D T+S C K G + + +
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC--KRGLIPNDVIFTT 350
Query: 330 LIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKG 385
LI + R+G + L ++ ++++ P++ + +++NGF NG +++ MIR+G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 386 LKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
L+PD++T+ ++ G G VE + M+ +GI DR FS +V
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ-NGIELDRVGFSALV 457
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 138/354 (38%), Gaps = 62/354 (17%)
Query: 86 FCYLIRGCSNKRFFDEGSQLHG---------HVIKVGWVDTNIFVANALVDFYSACGCLS 136
F IRGC N D +L+ ++ G+ N++V N L++ + G +S
Sbjct: 201 FDVPIRGCGN--LLDRMMKLNPTGTIWGFYMEILDAGF-PLNVYVFNILMNKFCKEGNIS 257
Query: 137 EAKKSFQAIPMED----VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFL 192
+A+K F I V+S+N++++ Y G + L + M+ +P + ++ +
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 193 NLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSL 252
N AL C KM +G L D K G I N V
Sbjct: 318 N-------AL------CKENKMDGAHG-------LFDEMCKRGLIPNDV----------- 346
Query: 253 ECCNSLMTSLLH----CGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXX 308
+ T+L+H G +D + E + M+ +G+ D V ++T
Sbjct: 347 -----IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 309 XXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNV----FCFTSIING 364
I+ G D +LID + R G V + ++ +++ + F++++ G
Sbjct: 402 IVD--GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 365 FAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES 418
G L M+R G+KPD VT+ ++ G + G + M+S
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQS 513
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 129/285 (45%), Gaps = 11/285 (3%)
Query: 140 KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
K Q+ P+ ++ ++ +LS A + + + L + M+ G + S+ +N +
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMY---GKCGDIKNAVSTYESLPM-TSLECC 255
+ + + ++K G++ V V S+LI+ + + D + VS E + +
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTV-SSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 177
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
N+++ G+V+D E+F M +G+ D VT+++
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD--M 235
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLG 371
+ +V ++ID +++ G + K++E++ P+VF + S+ING +G
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
+ +ML+ M+ KG PD VT+ ++ G S V+EG +F M
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 154/334 (46%), Gaps = 46/334 (13%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMR----LGLIDLALKLFDELPERNLATWNLVLRGF 58
SV + +K G+ ++ SSL+ + + IDL K+ + ++ +N ++ G
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 59 CELGLFDELLGLYNEIKLDNVELNGLSFCYLIRG-CSNKRFFDEGSQLHGHVIKVGWVDT 117
C++GL ++ + L++ ++ D V + +++ L+ G C + R+ D + V++ +
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD--IVP 242
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIPME----DVLSWNSMLSVYADNGLFLDALELL 173
N+ A++D + G SEA K ++ + DV ++NS+++ +G +A ++L
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 174 YIMQFWGKKPSIRSFVGFLNLSSKT-----GNALF---------GMQIHCCVIKMGF--- 216
+M G P + ++ +N K+ G LF G I I G+
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 217 ------------DNGSVHVQSALIDMYGKCGD--IKNAVSTYESLPMTSLE----CCNSL 258
+ ++++ I +YG C + ++ A+ +E++ + +E N +
Sbjct: 363 GRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 259 MTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFST 292
+ + G V+D +++F + +G+ D V+++T
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 117/282 (41%), Gaps = 11/282 (3%)
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
D+ S+N +++ F+ AL ++ M +G +P + + +N + + +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC----CNSLMTSLLH 264
+ +MGF V + + +ID K G + +AV ++ + + NSL+ L
Sbjct: 163 SKMEEMGF-RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 265 CGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDV 324
G D + MV I + +TF+ + + DV
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE--MTRRCVDPDV 279
Query: 325 SVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIINGFAWNGLGKQCLEMLEA 380
SLI+ G V ++++ + + LP+V + ++INGF + + ++
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 381 MIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGI 422
M ++GL D +T+ ++ G +G + + +F+ M+S I
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNI 381
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 181/438 (41%), Gaps = 19/438 (4%)
Query: 11 LGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELGLFDE 66
LG +LY S + + R + LAL + ++ E ++ T + +L G+C +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 67 LLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVD---TNIFVAN 123
+ L +++ + + +F LI G E L +++ G T V N
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
L LS KK + DV+ +N+++ DAL L M G +P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ ++ ++ G ++ +I+ N +V SALID + K G + A
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 244 YESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
Y+ + S++ +SL+ +D+ MF LM+ + + VT+ST
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNV 355
+ G + +LI + ++ +Q VF+Q+ PN+
Sbjct: 411 AKRVEEGMELFREMS--QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 356 FCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNS 415
+ +++G NG + + + E + R ++PD T+ ++ G +G VE+G +F +
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 416 MESLHGISPDRDHFSCMV 433
+ SL G+SP+ ++ M+
Sbjct: 529 L-SLKGVSPNVIAYNTMI 545
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 170/382 (44%), Gaps = 24/382 (6%)
Query: 51 WNLVLR-GFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHV 109
+ VLR G ++ L D+ +GL+ + + + F L+ + FD G
Sbjct: 651 YREVLRTGLSDIEL-DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISF-GEK 708
Query: 110 IKVGWVDTNIFVANALVDFYSACGCLSEAK----KSFQAIPMEDVLSWNSMLSVYADNGL 165
+++ + N++ N L++ + C LS A K + D+++ NS+L+ +
Sbjct: 709 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 768
Query: 166 FLDALELLYIMQFWGKKPSIRSFVGFLN---LSSKTGNALFGMQIHCCVIKMGFDNGSVH 222
DA+ L+ M G KP +F ++ L +K A+ + +++ G V
Sbjct: 769 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDR---MVQRGCQPDLV- 824
Query: 223 VQSALIDMYGKCGDIKNAVSTYESLPMTSLEC----CNSLMTSLLHCGIVDDVFEMFGLM 278
A+++ K GD A++ + +E ++++ SL DD +F M
Sbjct: 825 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 884
Query: 279 VDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSG 338
++G+ + +T+S+ K+ ++ +LIDA+++ G
Sbjct: 885 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN--PNLVTFSALIDAFVKKG 942
Query: 339 HVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFL 394
++ ++K++E++ PN+F ++S+INGF + +MLE MIRK P+ VT+
Sbjct: 943 KLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 1002
Query: 395 CVLTGCSHSGLVEEGRLVFNSM 416
++ G + V++G +F M
Sbjct: 1003 TLINGFCKAKRVDKGMELFREM 1024
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 171/395 (43%), Gaps = 33/395 (8%)
Query: 47 NLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLH 106
N+ T+N++L G C+ G + + ++ ++ +E + ++ +I G ++G +L
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 107 GHVIKVGWVDTNIFVANALVDFYSACGCLSEA----KKSFQAIPMEDVLSWNSMLSVYAD 162
++ G V N+ N ++ + G EA KK + P+ + ++N+++
Sbjct: 527 CNLSLKG-VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Query: 163 NGLFLDALELLYIMQ---FWGKKPSI------RSFVGFLNLSSKTGNALFGMQIHCCVIK 213
+G + EL+ M+ F G +I + + N + N +F +I C
Sbjct: 586 DGDREASAELIKEMRSCGFAGDASTIGLSSKFKREIEKPNRENACKNIIFSEEI-CSSES 644
Query: 214 MG--FDNGSVHVQSALIDMYGKCGDIKNAVSTY----ESLPMTSLECCNSLMTSLLHCGI 267
G +D V +++ L D+ ++ +A+ + +S P S+ + L++++
Sbjct: 645 CGESYDYREV-LRTGLSDI-----ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNK 698
Query: 268 VDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVS 327
D V FG + E +G+ ++ +KLGYE D+
Sbjct: 699 FDLVIS-FGEKM-EILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTL 756
Query: 328 CSLIDAYLR----SGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIR 383
SL++ + S V L ++ E P+ FT++I+G + + + +++ M++
Sbjct: 757 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 816
Query: 384 KGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES 418
+G +PD VT+ V+ G G + + N ME+
Sbjct: 817 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 851
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/392 (19%), Positives = 151/392 (38%), Gaps = 86/392 (21%)
Query: 36 ALKLFDELPER----NLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR 91
A+ L D + +R +L T+ V+ G C+ G D L L N+++ +E N + + +I
Sbjct: 807 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 866
Query: 92 GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVL 151
R D+ L + G +V+
Sbjct: 867 SLCKYRHEDDALNLFTEMENKGV--------------------------------RPNVI 894
Query: 152 SWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCV 211
+++S++S + G + DA LL M P++ +F ++ K G + +++ +
Sbjct: 895 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 954
Query: 212 IKMGFDNGSVHVQSALID---MYGKCGDIKNAVS---TYESLPMTSLECCNSLMTSLLHC 265
IK D ++ S+LI+ M + G+ K + + LP ++ N+L+
Sbjct: 955 IKRSID-PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP--NVVTYNTLINGFCKA 1011
Query: 266 GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVS 325
VD E+F M G+ + VT++T
Sbjct: 1012 KRVDKGMELFREMSQRGLVGNTVTYTT--------------------------------- 1038
Query: 326 VSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLGKQCLEMLEAM 381
LI + ++ +Q VF+Q+ PN+ + +++G NG + + + E +
Sbjct: 1039 ----LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 1094
Query: 382 IRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVF 413
R ++PD T+ ++ G +G + G + F
Sbjct: 1095 QRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 1126
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/411 (19%), Positives = 168/411 (40%), Gaps = 48/411 (11%)
Query: 20 GSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELGLFDELLGLYNEIK 75
G+ + GL R G IDLAL L ++ E ++ +N ++ G C+ D+ L L+ E+
Sbjct: 227 GTVVNGLCKR-GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
+ + ++ LI N + + S+L +I+ ++ N+ +AL+D + G L
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKL 344
Query: 136 SEAKKSFQAIPME----DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGF 191
EA+K + + D+ +++S+++ + + +A + +M P++ ++
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 192 LNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
+ K GM++ + + G +V + LI + + D NA ++ +
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 252 LECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXX 311
+ N L ++L G+ + G + + + + ST
Sbjct: 464 VHP-NILTYNILLDGLCKN-----GKLAKAMVVFEYLQRSTM------------------ 499
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAW 367
E D+ +I+ ++G V ++F + L PNV + ++I+GF
Sbjct: 500 ---------EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 368 NGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMES 418
G ++ +L+ M G P+ T+ ++ G E + M S
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 121/299 (40%), Gaps = 12/299 (4%)
Query: 143 QAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNAL 202
++ P ++ +N +LS A F + L MQ G + ++ F+N +
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 203 FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSL 262
+ + ++K+G++ V + S+L++ Y I +AV+ + + + T+L
Sbjct: 136 LALAVLAKMMKLGYEPDIVTL-SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194
Query: 263 LHC----GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKL 318
+H + + MV G D VT+ T K+
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254
Query: 319 GYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIINGFAWNGLGKQC 374
E+DV + ++ID + H+ + +F ++ P+VF ++S+I+ G
Sbjct: 255 --EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 375 LEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
+L MI + + P+ VTF ++ G + E +++ M I PD +S ++
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLI 370
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 129/299 (43%), Gaps = 24/299 (8%)
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGN-----ALF 203
DV+ +N+++S + G A++ + MQ +P+ R+F+ ++ +K+G+ +F
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 204 GMQIHC-CVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSL 262
M C CV +VH + LI+ + ++ AV + + + + T +
Sbjct: 613 DMMRRCGCV-------PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
Query: 263 LH----CGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKL 318
+ G FE F + +EG+ +D T+ A +
Sbjct: 666 MQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI 725
Query: 319 GYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLGKQC 374
S V LID + R G V + + +Q+ P++ +TS I+ + G +
Sbjct: 726 PRNS--FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Query: 375 LEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
+ +E M G+KP+ T+ ++ G + + L E+ + M+++ GI PD+ + C++
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAM-GIKPDKAVYHCLL 841
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/522 (19%), Positives = 208/522 (39%), Gaps = 93/522 (17%)
Query: 36 ALKLFDELPE----RNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR 91
A+ +F E PE N+A++N+V+ C+LG E L ++L + +S+ ++
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732
Query: 92 G---------------CSNKRFFDEGSQLHGHVI-------KVGWVD------------T 117
G ++ S ++G +I K+ +
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIP----MEDVLSWNSMLSVYADNGLFLDALELL 173
+ V L+D + G + A K F + DVL++ +++S + G ++A +L
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852
Query: 174 YIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGK 233
+ M G +P +F +N K G+ ++H +I+ G + +V + LID K
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC-SPNVVTYTTLIDGLCK 911
Query: 234 CGDIKNAVSTYESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVT 289
GD+ +A + L+ NS++ L G +++ ++ G G+ D VT
Sbjct: 912 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 290 FSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQ 349
++T L+DAY +SG + +Q++ ++
Sbjct: 972 YTT-------------------------------------LMDAYCKSGEMDKAQEILKE 994
Query: 350 I----PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGL 405
+ P + F ++NGF +G+ + ++L M+ KG+ P+ TF ++
Sbjct: 995 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054
Query: 406 VEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWS--S 463
++ ++ M S G+ PD + +V + G+G V S S
Sbjct: 1055 LKAATAIYKDMCS-RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 1113
Query: 464 LLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSET 505
+L + R + + A ++ + E A ++ +F+S+T
Sbjct: 1114 VLIKGFLKRKKFL--EAREVFDQMRREGLAADKEIFDFFSDT 1153
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 167/401 (41%), Gaps = 22/401 (5%)
Query: 10 KLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNL----ATWNLVLRGFCELGLFD 65
+ G N YI S++GL R+ + A + F E+ + + + ++ GFC+ G
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 66 ELLGLYNEIKLDNVELNGLSFCYLIRG-CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANA 124
+ E+ ++ + L++ +I G C + G H K D+ F
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF--TE 869
Query: 125 LVDFYSACGCLSEAKKS----FQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
L++ Y G + +A + QA +V+++ +++ G A ELL+ M G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+P+I ++ +N K+GN +++ G + +V + L+D Y K G++ A
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV-TYTTLMDAYCKSGEMDKA 988
Query: 241 VSTYESLPMTSLECC----NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX 296
+ + L+ N LM G+++D ++ M+ +GI + TF++
Sbjct: 989 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 1048
Query: 297 XXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP--- 353
C+ +G D +L+ + ++ ++ + +F+++
Sbjct: 1049 YCIRNNLKAATAIYKDMCSRGVG--PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106
Query: 354 -NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTF 393
+V ++ +I GF + E+ + M R+GL D+ F
Sbjct: 1107 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/522 (19%), Positives = 208/522 (39%), Gaps = 93/522 (17%)
Query: 36 ALKLFDELPE----RNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR 91
A+ +F E PE N+A++N+V+ C+LG E L ++L + +S+ ++
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732
Query: 92 G---------------CSNKRFFDEGSQLHGHVI-------KVGWVD------------T 117
G ++ S ++G +I K+ +
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792
Query: 118 NIFVANALVDFYSACGCLSEAKKSFQAIP----MEDVLSWNSMLSVYADNGLFLDALELL 173
+ V L+D + G + A K F + DVL++ +++S + G ++A +L
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852
Query: 174 YIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGK 233
+ M G +P +F +N K G+ ++H +I+ G + +V + LID K
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC-SPNVVTYTTLIDGLCK 911
Query: 234 CGDIKNAVSTYESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVT 289
GD+ +A + L+ NS++ L G +++ ++ G G+ D VT
Sbjct: 912 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 290 FSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQ 349
++T L+DAY +SG + +Q++ ++
Sbjct: 972 YTT-------------------------------------LMDAYCKSGEMDKAQEILKE 994
Query: 350 I----PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGL 405
+ P + F ++NGF +G+ + ++L M+ KG+ P+ TF ++
Sbjct: 995 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054
Query: 406 VEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXXXXXXXXXXXXXQTPGRGDCVMWS--S 463
++ ++ M S G+ PD + +V + G+G V S S
Sbjct: 1055 LKAATAIYKDMCS-RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 1113
Query: 464 LLRSCRVHRNETVGRRAAKILLGLDPEDFAVHLQVSNFYSET 505
+L + R + + A ++ + E A ++ +F+S+T
Sbjct: 1114 VLIKGFLKRKKFL--EAREVFDQMRREGLAADKEIFDFFSDT 1153
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 167/401 (41%), Gaps = 22/401 (5%)
Query: 10 KLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNL----ATWNLVLRGFCELGLFD 65
+ G N YI S++GL R+ + A + F E+ + + + ++ GFC+ G
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 66 ELLGLYNEIKLDNVELNGLSFCYLIRG-CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANA 124
+ E+ ++ + L++ +I G C + G H K D+ F
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF--TE 869
Query: 125 LVDFYSACGCLSEAKKS----FQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
L++ Y G + +A + QA +V+++ +++ G A ELL+ M G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+P+I ++ +N K+GN +++ G + +V + L+D Y K G++ A
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV-TYTTLMDAYCKSGEMDKA 988
Query: 241 VSTYESLPMTSLECC----NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX 296
+ + L+ N LM G+++D ++ M+ +GI + TF++
Sbjct: 989 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 1048
Query: 297 XXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP--- 353
C+ +G D +L+ + ++ ++ + +F+++
Sbjct: 1049 YCIRNNLKAATAIYKDMCSRGVG--PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106
Query: 354 -NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTF 393
+V ++ +I GF + E+ + M R+GL D+ F
Sbjct: 1107 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 48/328 (14%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPE----RNLATWNLVLRGFCELGL-FDE 66
G+G +Y S+L+ Y R GL + A+ +F+ + E NL T+N V+ + G+ F +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 67 LLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALV 126
+ ++E++ + V+ + ++F L+ CS ++ L + ++ ++F N L+
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR-IEQDVFSYNTLL 381
Query: 127 DFYSACGCLSEAKKSFQAIP----MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKK 182
D G + A + +P M +V+S+++++ +A G F +AL L M++ G
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 183 PSIRSFVGFLNLSSKTG------------------------NAL---FGMQIHCCVIKMG 215
S+ L++ +K G NAL +G Q +K
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 216 F-DNGSVHV------QSALIDMYGKCGDIKNAVSTYESLPMTSLEC----CNSLMTSLLH 264
F + HV S LID Y K G K A+ + L ++L+ +L
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 265 CGIVDDVFEMFGLMVDEGIGLDEVTFST 292
G+V + M EGI + VT+++
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 135/327 (41%), Gaps = 17/327 (5%)
Query: 112 VGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIP----MEDVLSWNSMLSVYADNGL-F 166
G ++ +AL+ Y G EA F ++ +++++N+++ G+ F
Sbjct: 261 AGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEF 320
Query: 167 LDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSA 226
+ MQ G +P +F L + S+ G + + + V +
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ-DVFSYNT 379
Query: 227 LIDMYGKCGDIKNAVSTYESLP----MTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG 282
L+D K G + A +P M ++ ++++ G D+ +FG M G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 283 IGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLL 342
I LD V+++T ++ G + DV +L+ Y + G
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASV--GIKKDVVTYNALLGGYGKQGKYDE 497
Query: 343 SQKVFEQIP----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLT 398
+KVF ++ LPN+ ++++I+G++ GL K+ +E+ GL+ D V + ++
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 399 GCSHSGLVEEGRLVFNSMESLHGISPD 425
+GLV + + M + GISP+
Sbjct: 558 ALCKNGLVGSAVSLIDEM-TKEGISPN 583
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 122/261 (46%), Gaps = 18/261 (6%)
Query: 31 GLIDLALKLFDELPER----NLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSF 86
G +DLA ++ ++P + N+ +++ V+ GF + G FDE L L+ E++ + L+ +S+
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 87 CYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIP 146
L+ + +E + + VG + ++ NAL+ Y G E KK F +
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVG-IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 147 MEDV----LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNAL 202
E V L++++++ Y+ GL+ +A+E+ + G + + + ++ K G
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 203 FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV--STYESLPMTSLECCNSLMT 260
+ + + K G V S +ID +G+ + + S SLP +S S ++
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNS-IIDAFGRSATMDRSADYSNGGSLPFSS-----SALS 620
Query: 261 SLLHCGIVDDVFEMFGLMVDE 281
+L + V ++FG + E
Sbjct: 621 ALTETE-GNRVIQLFGQLTTE 640
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 11 LGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELGLFDE 66
LG + ++L+ +Y ++G + AL + E+ ++++ T+N +L G+ + G +DE
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 67 LLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALV 126
+ ++ E+K ++V N L++ LI G S + E ++ G + ++ + +AL+
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG-LRADVVLYSALI 556
Query: 127 DFYSACGCLSEAKKSFQAIPME----DVLSWNSMLSVY 160
D G + A + E +V+++NS++ +
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 183/426 (42%), Gaps = 43/426 (10%)
Query: 33 IDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRG 92
+DL + P ++A ++ +L ++ +D ++ L+ ++++ + N L C ++
Sbjct: 66 LDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN-LCTCNILLN 124
Query: 93 CSNKRFFDEGSQLH------GHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIP 146
C F SQL G +IK+G ++V F S + + A+
Sbjct: 125 C-----FCRCSQLSLALSFLGKMIKLGH-------EPSIVTFGSLLNGFCRGDRVYDALY 172
Query: 147 MED----------VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSS 196
M D V+ +N+++ + +AL+LL M+ G P + ++ ++
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 197 KTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCN 256
+G ++ C+ K V +ALID K G + A YE + SL+ +
Sbjct: 233 SSGRWSDATRMVSCMTKREI-YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP-D 290
Query: 257 SLMTSLLHCGI-----VDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXX 311
+ SLL G+ +D+ EMFG MV +G D VT+S
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL-- 348
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAW 367
C + G + LI Y R+G + +++++F ++ PN+ + +++G
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 368 NGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRD 427
NG ++ L +L M + G+ D VT+ ++ G +G V + ++ S+ + G+ PD
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL-NCQGLMPDIW 467
Query: 428 HFSCMV 433
++ M+
Sbjct: 468 TYTTMM 473
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 168/403 (41%), Gaps = 55/403 (13%)
Query: 7 RAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELG 62
+ +KLGF +L +SL+ Y I+ A+ LFD++ + N+ T+ ++R C+
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRG-CSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
+ + L+N++ + N +++ L+ G C R+ D L + + ++ N+
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR--RIEPNVIT 260
Query: 122 ANALVDFYSACGCLSEAKKSF----QAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQ 177
AL+D + G L EAK+ + Q DV ++ S+++ GL +A ++ Y+M+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 178 FWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCG-- 235
G P+ + ++ K+ GM+I + + G ++ + LI Y G
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI-TYTVLIQGYCLVGRP 379
Query: 236 ----DIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFS 291
++ N +S+ + P + N L+ L G V+ +F M + ++ VT++
Sbjct: 380 DVAQEVFNQMSSRRAPP--DIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 292 TXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDV-SVSCSLIDAYLRSGHVLLSQKVFEQI 350
KLG D + CSL ++
Sbjct: 438 IIIQGM------------------CKLGKVEDAFDLFCSLFSKGMK-------------- 465
Query: 351 PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTF 393
PNV +T++I+GF GL + + + M G P+ +
Sbjct: 466 --PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/423 (19%), Positives = 180/423 (42%), Gaps = 37/423 (8%)
Query: 33 IDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRG 92
+DL ++ P ++ + +L ++ +D ++ L+ ++++ + L C ++
Sbjct: 68 LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIP-PLLCTCNIVMH 126
Query: 93 C---SNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIP--- 146
C S++ S G ++K+G+ + ++ +L++ Y + +A F I
Sbjct: 127 CVCLSSQPC--RASCFLGKMMKLGF-EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 147 -MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGM 205
+V+++ +++ N A+EL M G +P++ ++ + + G
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 206 QIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE----CCNSLMTS 261
+ ++K + + +ALID + K G + A Y + S+ SL+
Sbjct: 244 WLLRDMMKRRIEPNVITF-TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 262 LLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYE 321
L G++D+ +MF LM G +EV ++T +K+ YE
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED---------GMKIFYE 353
Query: 322 -------SDVSVSCSLIDAYLRSGHVLLSQKVFEQI----PLPNVFCFTSIINGFAWNGL 370
++ LI Y G ++Q+VF Q+ P++ + +++G NG
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Query: 371 GKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFS 430
++ L + E M ++ + + VT+ ++ G G VE+ +F S+ S G+ P+ ++
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS-KGMKPNVITYT 472
Query: 431 CMV 433
M+
Sbjct: 473 TMI 475
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/406 (17%), Positives = 155/406 (38%), Gaps = 55/406 (13%)
Query: 20 GSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNV 79
S +G M+LG E +L T+ +L G+C ++ + L+++I
Sbjct: 137 ASCFLGKMMKLGF------------EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 80 ELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAK 139
+ N +++ LIR R + +L + G
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG-------------------------- 218
Query: 140 KSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
+V+++N++++ + G + DA LL M +P++ +F ++ K G
Sbjct: 219 ------SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVG 272
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLM 259
+ +++ +I+M V +LI+ G + A + + +
Sbjct: 273 KLMEAKELYNVMIQMSV-YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 260 TSLLH----CGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
T+L+H V+D ++F M +G+ + +T++ +
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP----NVFCFTSIINGFAWNGLG 371
+ D+ L+D +G V + +FE + N+ +T II G G
Sbjct: 392 RRA--PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSME 417
+ ++ ++ KG+KP+ +T+ +++G GL+ E +F M+
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
>AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G32450.1); Has 7881 Blast hits to 3723
proteins in 97 species: Archae - 0; Bacteria - 6;
Metazoa - 6; Fungi - 16; Plants - 7829; Viruses - 0;
Other Eukaryotes - 24 (source: NCBI BLink). |
chr2:10888102-10889949 FORWARD
Length = 615
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 324 VSVSCSLIDAYLRSGHVLL-----------SQKVFEQIPLPNVFCFTSIINGFAWNGLGK 372
+S S S +D L S HVLL + VFE++ N+ + II FA NG G+
Sbjct: 280 ISASVSHLD--LSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGE 337
Query: 373 QCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCM 432
++M +G PD F + C G V+EG L F SM +GI+P + + +
Sbjct: 338 DAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSL 397
Query: 433 VXXXXXXXXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDP 489
V + P + +W +L+ RVH N +G A+++ LDP
Sbjct: 398 VEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Query: 23 LVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELN 82
L+ +Y GL + A +F+++ E+NL TW +++R F + G ++ + +++ K + +
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 83 GLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGW-VDTNIFVANALVDFYSACGCLSEAKKS 141
G F + C DEG LH + + + +I +LV+ Y+ G L EA +
Sbjct: 355 GQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEF 413
Query: 142 FQAIPME-DVLSWNSMLSV 159
+ +PME +V W +++++
Sbjct: 414 VERMPMEPNVDVWETLMNL 432
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 173/422 (40%), Gaps = 25/422 (5%)
Query: 23 LVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELGLFDELLGLYNEIKLDN 78
L+ + + G +D A+ E+ E +L + ++RGFC+ G D L++E+
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 79 VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA 138
+++ LIRG E S++ +I+ G V N++ L+D G EA
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG-VRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 139 KKSFQAIPMED----VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL 194
+ + +D +++N +++ +GL DA+E++ +M+ +P ++ L
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 195 SSKTGNALFGMQIHCCVIK-MGFDNGSVHVQSALIDMYGKCGDIKNAVSTY----ESLPM 249
G+ ++ ++K + + V +ALI K + A+ Y E L
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 250 TSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXX 309
N L+ S L G V+ E++ + D I + T++
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 310 XXHCCAIKLG--YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIIN 363
C +++ S +C L+ + + G + + ++FE++ P+V F +I+
Sbjct: 517 L---CKMRVSELQPSVFDYNC-LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
G G K +L M R GL PD T+ ++ G ++E F+ M G
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD-SGFE 631
Query: 424 PD 425
PD
Sbjct: 632 PD 633
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 187/442 (42%), Gaps = 21/442 (4%)
Query: 9 IKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLA----TWNLVLRGFCELGLF 64
+K GF FN+Y + L+ R A+ L E+ +L ++N V+RGFCE
Sbjct: 134 LKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKEL 193
Query: 65 DELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANA 124
++ L L NE+K + +++ LI DE + +G ++ ++ V +
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG-LEADLVVYTS 252
Query: 125 LVDFYSACGCLSEAKKSFQAIPMED----VLSWNSMLSVYADNGLFLDALELLYIMQFWG 180
L+ + CG L K F + +++N+++ + G +A E+ M G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 181 KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNA 240
+P++ ++ G ++ G +Q+ +I+ + +V + +I+ K G + +A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV-TYNIIINKLCKDGLVADA 371
Query: 241 VSTYESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX 296
V E + N L+ L G +D+ ++ LM+ + D S
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 297 XXXXXXXXXXXXXXXHCCAI-KLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP---- 351
+ + KLG V+ + L+++ L++G V + ++++QI
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI-LLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 352 LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRL 411
+ N +T++I+GF G+ +L M L+P + C+L+ G +++
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 412 VFNSMESLHGISPDRDHFSCMV 433
+F M+ + PD F+ M+
Sbjct: 551 LFEEMQRDNNF-PDVVSFNIMI 571
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 177/422 (41%), Gaps = 29/422 (6%)
Query: 33 IDLALKLFDELP----ERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCY 88
++ AL+L +E+ +L TW +++ FC+ G DE +G E+K +E + + +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAI--- 145
LIRG + D G L V++ G I N L+ + G L EA + F+ +
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAI-TYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 146 -PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFG 204
+V ++ ++ G +AL+LL +M ++P+ ++ +N K G
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV---------STYESLPMTSLECC 255
++I + K ++ L + K GD+ A S+Y + S
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAK-GDLDEASKLLYLMLKDSSYTDPDVISY--- 427
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
N+L+ L + +++ L+V++ D VT +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLG 371
K+ SD ++ID + ++G + +++ + ++ + P+VF + +++ G
Sbjct: 488 SKIVRNSDTYT--AMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSC 431
Q + E M R PD V+F ++ G +G ++ + M S G+SPD +S
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM-SRAGLSPDLFTYSK 604
Query: 432 MV 433
++
Sbjct: 605 LI 606
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/404 (19%), Positives = 170/404 (42%), Gaps = 22/404 (5%)
Query: 39 LFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRF 98
L +E + +L T+ ++ F LL L ++++ + ++ + + F +I S
Sbjct: 345 LIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 404
Query: 99 FDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNS--- 155
D+ ++ + + G T N L+ Y G L E+ + + +++L N
Sbjct: 405 LDQAMKIFEKMKESGCKPT-ASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTC 463
Query: 156 --MLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIK 213
++ + + +A ++Y MQ +G KP + +F ++ G+ + + +
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM--IIPR 521
Query: 214 MGFDNGSVHVQS--ALIDMYGKCGDIKNAVSTYESLP----MTSLECCNSLMTSLLHCGI 267
M + +V++ +++ Y + G ++ A+ + + +L NSL+ L+
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 268 VDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVS 327
+D V E+ LM + G+ D VTFST + ++ G + D+
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFST--LMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF 639
Query: 328 CSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIR 383
L Y R+G ++++ Q+ PNV +T II+G+ G K+ +++ + M
Sbjct: 640 SILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG 699
Query: 384 -KGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDR 426
GL P+ T+ ++ G + + + ME + P R
Sbjct: 700 IVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEG-KNVVPTR 742
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/435 (18%), Positives = 185/435 (42%), Gaps = 30/435 (6%)
Query: 10 KLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELGLFD 65
+LG+ +++ ++L+ + + G +D AL L DE+ + ++ +N+ + F ++G D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255
Query: 66 ELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANAL 125
++EI+ + ++ + +++ +I DE ++ H+ K V + N +
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT-YAYNTM 314
Query: 126 VDFYSACGCLSEA------KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
+ Y + G EA +++ +IP V+++N +L+ G +AL++ M+
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIP--SVIAYNCILTCLRKMGKVDEALKVFEEMK-K 371
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMG-FDNGSVHVQSALIDMYGKCGDIK 238
P++ ++ +++ + G ++ + K G F N V + ++D K +
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN--VRTVNIMVDRLCKSQKLD 429
Query: 239 NAVSTYESLPMT-----SLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTX 293
A + +E + + C SL+ L G VDD ++++ M+D + + +++
Sbjct: 430 EACAMFEEMDYKVCTPDEITFC-SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 294 XXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP-- 351
I D+ + + +D ++G + +FE+I
Sbjct: 489 IKNFFNHGRKEDGHKIYKD--MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Query: 352 --LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
+P+ ++ +I+G G + E+ +M +G D + V+ G G V +
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 410 RLVFNSMESLHGISP 424
+ M++ G P
Sbjct: 607 YQLLEEMKT-KGFEP 620
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 190/453 (41%), Gaps = 38/453 (8%)
Query: 7 RAIKLGFGFNLYI-GSSLVGL--YMRLGLIDLALKLFDELPE----RNLATWNLVLRGFC 59
+ I+L NL + L+GL Y I A ++FD++ + N+ T+N+++ G+C
Sbjct: 156 KMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYC 215
Query: 60 ELGLFDELLGLYNEIKLD-NVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
G ++ LG+ + + V + +++ +++ S K + +L + K G V N
Sbjct: 216 LEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLV-PN 274
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPMEDVL----SWNSMLSVYADNGLFLDALELLY 174
N LV Y G L EA + + + +VL ++N +++ + G + LEL+
Sbjct: 275 RVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMD 334
Query: 175 IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGK- 233
M+ +P + ++ ++ G G+ + + +N V ++ K
Sbjct: 335 AMKSLKLQPDVVTYNTLID-----GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKW 389
Query: 234 -CGDIKNAVSTYESLPMTSLE-------CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGL 285
C + K T + + + ++L+ + L G + EM M +GI +
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 286 DEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQK 345
+ +T +T A K G+ D +LI + R V + +
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLN--SAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 346 VFEQIP----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
+++++ P V F S+I G +G + +E + + GL PD TF ++ G
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 402 HSGLVEEGRLVFNSMESL-HGISPDRDHFSCMV 433
G VE+ +N ES+ H P D+++C +
Sbjct: 568 KEGRVEKAFEFYN--ESIKHSFKP--DNYTCNI 596
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 173/430 (40%), Gaps = 30/430 (6%)
Query: 9 IKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDEL-------PERNLATWNLVLRGFCEL 61
+K+G N+ + LV Y G ++ AL + + + P+ T+N +L+ +
Sbjct: 196 VKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDN--VTYNTILKAMSKK 253
Query: 62 GLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFV 121
G +L L ++K + + N +++ L+ G E Q+ ++K V ++
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI-VELMKQTNVLPDLCT 312
Query: 122 ANALVDFYSACGCLSE------AKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYI 175
N L++ G + E A KS + P DV+++N+++ + GL L+A +L+
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQP--DVVTYNTLIDGCFELGLSLEARKLMEQ 370
Query: 176 MQFWG-KKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
M+ G K + + L + ++ V GF V + LI Y K
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT-LIKAYLKV 429
Query: 235 GDIKNAVSTYESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
GD+ A+ + ++ N+++ +L +D+ + G +DEVT+
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489
Query: 291 STXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQI 350
T +K+ VS SLI G L+ + F+++
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKIT--PTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 351 P----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLV 406
LP+ F SII G+ G ++ E I+ KPD T +L G G+
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 407 EEGRLVFNSM 416
E+ FN++
Sbjct: 608 EKALNFFNTL 617
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 169/422 (40%), Gaps = 33/422 (7%)
Query: 10 KLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERN----LATWNLVLRGFCELGLFD 65
K G N ++LV Y +LG + A ++ + + + N L T+N+++ G C G
Sbjct: 268 KNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMR 327
Query: 66 ELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANAL 125
E L L + +K ++ + +++ LI GC E +L + G V N N
Sbjct: 328 EGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG-VKANQVTHNIS 386
Query: 126 VDFYSACGCLSEAKKSFQAIPME---------DVLSWNSMLSVYADNGLFLDALELLYIM 176
+ + C E +++ E D++++++++ Y G ALE++ M
Sbjct: 387 LKWL----CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM 442
Query: 177 QFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGD 236
G K + + L+ K + K GF V LI + +
Sbjct: 443 GQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV-TYGTLIMGFFREEK 501
Query: 237 IKNAVSTYESLP----MTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFST 292
++ A+ ++ + ++ NSL+ L H G + E F + + G+ D+ TF++
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 293 XXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL 352
+IK ++ D L++ + G + F +
Sbjct: 562 IILGYCKEGRVEKAFEFYNE--SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Query: 353 P---NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
+ + ++I+ F + K+ ++L M KGL+PDR T+ + S L+E+G
Sbjct: 620 EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI-----SLLMEDG 674
Query: 410 RL 411
+L
Sbjct: 675 KL 676
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 185/428 (43%), Gaps = 64/428 (14%)
Query: 28 MRLGLIDL----ALKLF-DELPERNLAT---WNLVLRGFCELGLFDELLGLYNEIKLDNV 79
+R GL+D+ A+ LF D + R L T ++ + + +D +L L +++L +
Sbjct: 60 LRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGI 119
Query: 80 ELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA- 138
N + +I R G +IK+G+ + N + L++ G +SEA
Sbjct: 120 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGY-EPNTITFSTLINGLCLEGRVSEAL 178
Query: 139 ---KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLS 195
+ + D+++ N++++ +G +A+ L+ M +G +P+ ++ LN+
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 196 SKTGNALFGMQIHCCVIKMGFDNGSVHV--QSALIDMYGKCGDIKNAVSTYESLPM---- 249
K+G M++ + KM N + S +ID K G + NA + + + M
Sbjct: 239 CKSGQTALAMEL---LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 250 TSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXX 309
T++ N L+ + G DD ++ M+ I + VTFS
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV----------------- 338
Query: 310 XXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIINGF 365
LID++++ G + ++++ +++ P+ +TS+I+GF
Sbjct: 339 --------------------LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 366 AWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPD 425
+ +M++ M+ KG P+ TF ++ G + +++G +F M SL G+ D
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVAD 437
Query: 426 RDHFSCMV 433
++ ++
Sbjct: 438 TVTYNTLI 445
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 164/407 (40%), Gaps = 83/407 (20%)
Query: 31 GLIDLALKLFDELPERNL----ATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSF 86
G LA++L ++ ERN+ +++++ G C+ G D L+NE+++ + N +++
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 87 CYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAI- 145
LI G N +D+G++L +IK ++ N+ + L+D + G L EA++ + +
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIK-RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 146 ---PMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNAL 202
D +++ S++ + A +++ +M G P+IR+F +N K
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 203 FGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSL 262
G+++ F S+ G + + V TY N+L+
Sbjct: 421 DGLEL--------FRKMSLR------------GVVADTV-TY-----------NTLIQGF 448
Query: 263 LHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYES 322
G ++ E+F MV + + VT+
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKI------------------------------ 478
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPLP----NVFCFTSIINGFAWNGLGKQCLEML 378
L+D +G + ++FE+I ++ + II+G ++
Sbjct: 479 -------LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 379 EAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPD 425
++ KG+KP T+ ++ G G + E L+F ME G +PD
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE-DGHAPD 577
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 171/418 (40%), Gaps = 25/418 (5%)
Query: 28 MRLGLIDL----ALKLFDEL----PERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNV 79
+R G++D+ A+ LF E+ P L ++ + +D +L L +++L +
Sbjct: 44 LRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI 103
Query: 80 ELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA- 138
N + +I C R G +IK+G+ + + + L++ G +SEA
Sbjct: 104 AHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGY-EPDTVTFSTLINGLCLEGRVSEAL 162
Query: 139 ---KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLS 195
+ + +++ N++++ NG DA+ L+ M G +P+ ++ L +
Sbjct: 163 ELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVM 222
Query: 196 SKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECC 255
K+G M++ + + +V S +ID K G + NA + + + + +
Sbjct: 223 CKSGQTALAMELLRKMEERKIKLDAVKY-SIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 256 NSLMTSLL----HCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXX 311
+ T+L+ + G DD ++ M+ I D V FS
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL-- 339
Query: 312 HCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAW 367
H I+ G D SLID + + + + + + + PN+ F +ING+
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 368 NGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPD 425
L LE+ M +G+ D VT+ ++ G G +E + +F M S + PD
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS-RRVRPD 456
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 7 RAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNL----ATWNLVLRGFCELG 62
R ++ GF N ++ + + G LA++L ++ ER + +++++ G C+ G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
D L+NE+++ + + + + LIRG +D+G++L +IK + ++
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK-RKITPDVVAF 320
Query: 123 NALVDFYSACGCLSEA----KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
+AL+D + G L EA K+ Q D +++ S++ + A +L +M
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 179 WGKKPSIRSFVGFLN 193
G P+IR+F +N
Sbjct: 381 KGCGPNIRTFNILIN 395
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/439 (19%), Positives = 177/439 (40%), Gaps = 29/439 (6%)
Query: 7 RAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPE----RNLATWNLVLRGFCELG 62
+ IKLG+ + S+L+ G + AL+L D + E L T N ++ G C G
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIR-GCSNKRF---FDEGSQLHGHVIKVGWVDTN 118
+ + L + + + N +++ +++ C + + + ++ IK+ V +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPME----DVLSWNSMLSVYADNGLFLDALELLY 174
I + D G L A F + ++ D++ + +++ + G + D +LL
Sbjct: 252 IIIDGLCKD-----GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 175 IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
M P + +F ++ K G ++H +I+ G +V ++LID + K
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV-TYTSLIDGFCKE 365
Query: 235 GDIKNAVSTYESLPMT----SLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTF 290
+ A + + ++ N L+ ++DD E+F M G+ D VT+
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 291 STXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQI 350
+T + ++ D+ L+D +G + ++FE+I
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRV--RPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 351 PLP----NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLV 406
++ + II+G ++ ++ KG+KPD T+ ++ G G +
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 407 EEGRLVFNSMESLHGISPD 425
E L+F ME G SP+
Sbjct: 544 SEADLLFRKMEE-DGHSPN 561
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 157/418 (37%), Gaps = 92/418 (22%)
Query: 23 LVGLYMRLGLIDLALKLFDELPERNLA----TWNLVLRGFCELGLFDELLGLYNEIKLDN 78
L+ M G +D ALKL DE+ R L T+N ++RG C+ G+ D + ++L
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 79 VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA 138
E + +S+ L+R N+ ++EG +L + D N+ + L+ G + EA
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 139 KKSFQAIP----MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNL 194
+ + D S++ +++ + G A+E L M G P I ++ L
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 195 SSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDI--KNAVSTYESLPMTSL 252
K G A ++I +GK G++ S+Y
Sbjct: 413 LCKNGKADQALEI-----------------------FGKLGEVGCSPNSSSY-------- 441
Query: 253 ECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXH 312
N++ ++L G M M+ GI DE+T++
Sbjct: 442 ---NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN--------------------- 477
Query: 313 CCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP-------LPNVFCFTSIINGF 365
S+I R G V + FE + P+V + ++ GF
Sbjct: 478 ----------------SMISCLCREGMV---DEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 366 AWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
+ + +LE+M+ G +P+ T+ ++ G +G E + N + + IS
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 179/428 (41%), Gaps = 29/428 (6%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNLA----TWNLVLRGFCELGL-FDE 66
G +++ ++L+ Y R G + +L+L D + ++ T+N V+ GL ++
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 67 LLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALV 126
LLGL+ E++ + ++ + +++ L+ C+ + DE + + G + ++ + LV
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVF-RTMNDGGIVPDLTTYSHLV 289
Query: 127 DFY-------SACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFW 179
+ + C L E S ++P D+ S+N +L YA +G +A+ + + MQ
Sbjct: 290 ETFGKLRRLEKVCDLLGEMA-SGGSLP--DITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 180 GKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKN 239
G P+ ++ LNL ++G Q+ +K + + LI+++G+ G K
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLF-LEMKSSNTDPDAATYNILIEVFGEGGYFKE 405
Query: 240 AVSTYESLPMTSLECCNSLMTSLLHC----GIVDDVFEMFGLMVDEGIGLDEVTFSTXXX 295
V+ + + ++E ++ G+ +D ++ M I ++
Sbjct: 406 VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIE 465
Query: 296 XXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHV-----LLSQKVFEQI 350
+ G + SL+ ++ R G V +LS+ V I
Sbjct: 466 AFGQAALYEEALVAFNTMHEV--GSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Query: 351 PLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGR 410
P N F + I + G ++ ++ M + PD T VL+ S + LV+E R
Sbjct: 524 PR-NRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECR 582
Query: 411 LVFNSMES 418
F M++
Sbjct: 583 EQFEEMKA 590
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 328 CSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIIN-----GFAWNGLGKQCLEML 378
+LI+AY R+G S ++ +++ P++ + ++IN G W GL L +
Sbjct: 180 TALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL----LGLF 235
Query: 379 EAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
M +G++PD VT+ +L+ C+ GL +E +VF +M GI PD +S +V
Sbjct: 236 AEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMND-GGIVPDLTTYSHLV 289
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 176/405 (43%), Gaps = 65/405 (16%)
Query: 33 IDLALKLFDEL----PERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCY 88
+D A+ LF E+ P ++ +N +L ++ FD ++ L ++ + + S+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA----KKSFQA 144
LI + + G ++K+G+ + +I ++L++ Y +SEA + F
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGY-EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 145 IPMEDVLSWNSMLSVYADNGLFL-----DALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
+ +++N+++ +GLFL +A+ L+ M G +P + ++ +N K G
Sbjct: 180 EYQPNTVTFNTLI-----HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE----CC 255
+ + + + K G V + + +ID ++ +A++ + + +
Sbjct: 235 DIDLALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
NSL+ L + G D + M++ I + VTFS
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS------------------------ 329
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLG 371
+LIDA+++ G ++ ++K+++++ P++F ++S+INGF +
Sbjct: 330 -------------ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
+ M E MI K P+ VT+ ++ G + VEEG +F M
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/449 (18%), Positives = 187/449 (41%), Gaps = 25/449 (5%)
Query: 3 SVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDEL----PERNLATWNLVLRGF 58
+V + +KLG+ ++ SSL+ Y I A+ L D++ + N T+N ++ G
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 59 CELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTN 118
E + L + + + + ++ ++ G + D L + K G ++ +
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK-GKIEAD 254
Query: 119 IFVANALVDFYSACGCLSEAKKSFQAIPME----DVLSWNSMLSVYADNGLFLDALELLY 174
+ + ++D +++A F + + +V+++NS++ + G + DA LL
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 175 IMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKC 234
M P++ +F ++ K G + +++ +IK D + S+LI+ +
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMH 373
Query: 235 GDIKNAVSTYESLPMTSLEC------CNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEV 288
+ A +E M S +C N+L+ V++ E+F M G+ + V
Sbjct: 374 DRLDEAKHMFEL--MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 289 TFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFE 348
T++T + G D+ L+D + G + + VFE
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKK--MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 349 QIPL----PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSG 404
+ P+++ + +I G G + ++ ++ KG+KP+ + + +++G G
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 405 LVEEGRLVFNSMESLHGISPDRDHFSCMV 433
L EE +F M+ G P+ ++ ++
Sbjct: 550 LKEEADALFREMKE-DGTLPNSGTYNTLI 577
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 168/427 (39%), Gaps = 87/427 (20%)
Query: 21 SSLVGLYMRLGLIDLALKLFDELPERNLA----TWNLVLRGFCELGLFDELLGLYNEIKL 76
+SL+ Y R + +L E+ +RN+ T+ V++G C G D + E+
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 77 DNVELNGLSFCYLIRG-CSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
N + + LI+ N RF D L +K + +IF N+L+ S +
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE--MKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 136 SEAKKSFQAIPMEDVL-----SWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVG 190
EA+ SF +E+ L ++ + +S Y + F A + + M+ G P+ G
Sbjct: 504 DEAR-SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 191 FLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMT 250
+N K G I C +++D G GD K TY
Sbjct: 563 LINEYCKKGKV-----IEAC-----------SAYRSMVDQ-GILGDAK----TY------ 595
Query: 251 SLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXX 310
LM L VDD E+F M +GI D ++
Sbjct: 596 -----TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV------------------ 632
Query: 311 XHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIINGFA 366
LI+ + + G++ + +F+++ PNV + ++ GF
Sbjct: 633 -------------------LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 367 WNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDR 426
+G ++ E+L+ M KGL P+ VT+ ++ G SG + E +F+ M+ L G+ PD
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK-LKGLVPDS 732
Query: 427 DHFSCMV 433
++ +V
Sbjct: 733 FVYTTLV 739
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/457 (19%), Positives = 178/457 (38%), Gaps = 64/457 (14%)
Query: 16 NLYIGSSLVGLYMRLGLIDLALKLFDELPERNLAT----WNLVLRGFCELGLFDELLGLY 71
N+ I ++L+ +++ A+++ E+ E+ +A +N ++ G + DE
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 72 NEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSA 131
E+ + ++ N ++ I G F + + + G V N + L++ Y
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG-VLPNKVLCTGLINEYCK 569
Query: 132 CGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFL-----DALELLYIMQFWGKKPSIR 186
G + EA +++++ + +L +V NGLF DA E+ M+ G P +
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLM-NGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 187 SFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYES 246
S+ +N SK GN I +++ G +V + + L+ + + G+I+ A +
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGL-TPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 247 LPMTSLECCNSLMTSLLHCGIVD---------DVFEMFGLMVDEGIGLDEVTFSTXXXXX 297
+ + L ++ +C I+D + F +F M +G+ D ++T
Sbjct: 688 MSVKGLHP-----NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD-- 740
Query: 298 XXXXXXXXXXXXXXHCCAI-------------KLGYESDVSVSCSLIDAYLRSGHVLLSQ 344
CC + K G S + +LI+ + G L
Sbjct: 741 --------------GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 345 KV--------FEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCV 396
+V F++ PN + +I+ G + E+ M L P +T+ +
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 397 LTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
L G G E VF+ + GI PD +S ++
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIA-AGIEPDHIMYSVII 882
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 16/211 (7%)
Query: 2 NSVHCRAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPER----NLATWNLVLRG 57
+S+ ++ G N+ I + L+G + R G I+ A +L DE+ + N T+ ++ G
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 58 FCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDT 117
+C+ G E L++E+KL + + + L+ GC + + G K T
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASST 766
Query: 118 NIFVANALVDFYSACGCLSEAKK---------SFQAIPMEDVLSWNSMLSVYADNGLFLD 168
F NAL+++ G +E K SF + +++N M+ G
Sbjct: 767 APF--NALINWVFKFG-KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 169 ALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
A EL + MQ P++ ++ LN K G
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 175/405 (43%), Gaps = 65/405 (16%)
Query: 33 IDLALKLFDEL----PERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCY 88
+D A+ LF E+ P ++ ++ +L ++ FD ++ L +++ + N ++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEA----KKSFQA 144
LI + + G ++K+G+ + NI ++L++ Y +SEA + F
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGY-EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 145 IPMEDVLSWNSMLSVYADNGLFL-----DALELLYIMQFWGKKPSIRSFVGFLNLSSKTG 199
+ +++N+++ +GLFL +A+ L+ M G +P + ++ +N K G
Sbjct: 181 GYQPNTVTFNTLI-----HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 200 NALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLM 259
+ + + + + G V + + +ID K + +A++ ++ + +
Sbjct: 236 DTDLAFNLLNKMEQGKLEPG-VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 260 TSLLHC----GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
+SL+ C G D + M++ I D TFS
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS------------------------ 330
Query: 316 IKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLG 371
+LIDA+++ G ++ ++K+++++ P++ ++S+INGF +
Sbjct: 331 -------------ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 372 KQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
+ +M E M+ K PD VT+ ++ G VEEG VF M
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/475 (19%), Positives = 190/475 (40%), Gaps = 58/475 (12%)
Query: 11 LGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELGLFDE 66
LG N Y S L+ + R + LAL + ++ E N+ T + +L G+C E
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 67 LLGLYNEIKLDNVELNGLSFCYLIRGC--SNK---------RFFDEGSQ----LHGHVI- 110
+ L +++ + + N ++F LI G NK R +G Q +G V+
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 111 ------------------KVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPME---- 148
+ G ++ + + N ++D + +A F+ + +
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
+V++++S++S + G + DA LL M P + +F ++ K G + +++
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC------CNSLMTSL 262
++K D S+ S+LI+ + + A +E M S C N+L+
Sbjct: 350 DEMVKRSID-PSIVTYSSLINGFCMHDRLDEAKQMFEF--MVSKHCFPDVVTYNTLIKGF 406
Query: 263 LHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYES 322
V++ E+F M G+ + VT++ + G
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE--MVSDGVPP 464
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLGKQCLEML 378
++ +L+D ++G + + VFE + P ++ + +I G G + ++
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 379 EAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
+ KG+KPD V + +++G G EE +F M+ G P+ ++ ++
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNTLI 578
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/401 (18%), Positives = 168/401 (41%), Gaps = 25/401 (6%)
Query: 29 RLGLIDLALKLFDELPERNLAT----WNLVLRGFCELGLFDELLGLYNEIKLDNVELNGL 84
+ G DLA L +++ + L +N ++ G C+ D+ L L+ E++ + N +
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 85 SFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQA 144
++ LI N + + S+L +I+ ++ ++F +AL+D + G L EA+K +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 145 IPMEDV----LSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGN 200
+ + ++++S+++ + + +A ++ M P + ++ + K
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 201 ALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESL-----PMTSLECC 255
GM++ + + G +V + LI + GD A ++ + P ++
Sbjct: 412 VEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQAGDCDMAQEIFKEMVSDGVP-PNIMTY 469
Query: 256 NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCA 315
N+L+ L G ++ +F + + E T T C
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKM---EPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 316 IKL-GYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIINGFAWNGL 370
+ L G + DV ++I + R G + +F+++ LPN C+ ++I +G
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 371 GKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRL 411
+ E+++ M G D T + ++T H G +++ L
Sbjct: 587 REASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKSFL 626
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 181/438 (41%), Gaps = 19/438 (4%)
Query: 11 LGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPE----RNLATWNLVLRGFCELGLFDE 66
LG NLY + ++ R + AL + ++ + ++ T N +L GFC E
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 67 LLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQL-HGHVIKVGWVDTNIF--VAN 123
+ L +++ + + ++F L+ G E L V+K D + V N
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 124 ALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
L L+ K + DV+ +++++ DAL L M G +P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ ++ ++ G ++ +++ N +V ++LID + K G + A
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKI-NPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 244 YESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
++ + S++ NSL+ +D+ ++F LMV + D VT++T
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNV 355
+ G + +LI + ++ +Q VF+Q+ PN+
Sbjct: 393 AKKVVDGMELFRDMS--RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 356 FCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNS 415
+ ++++G NG ++ + + E + + ++PD T+ + G +G VE+G +F S
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 416 MESLHGISPDRDHFSCMV 433
+ SL G+ PD ++ M+
Sbjct: 511 L-SLKGVKPDVIAYNTMI 527
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/444 (18%), Positives = 184/444 (41%), Gaps = 23/444 (5%)
Query: 7 RAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPE----RNLATWNLVLRGFCELG 62
+ +KLG+G ++ +SL+ + I A+ L D++ E + T+ ++ G +
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 184
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
E + L + + + + +++ +I G + D L + K G ++ ++ +
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK-GKIEADVVIY 243
Query: 123 NALVDFYSACGCLSEAKKSFQAIPME----DVLSWNSMLSVYADNGLFLDALELLYIMQF 178
+ ++D + +A F + + DV +++S++S + G + DA LL M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQS-----ALIDMYGK 233
P++ +F ++ +K G + ++ +I+ D V S + D +
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 234 CGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTX 293
I + + + LP + N+L+ V D E+F M G+ + VT++T
Sbjct: 364 AQQIFTLMVSKDCLP--DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 294 XXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL- 352
+ G ++ +L+D ++G + + VFE +
Sbjct: 422 IHGFFQASDCDNAQMVFKQ--MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 353 ---PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEG 409
P+++ + + G G + ++ ++ KG+KPD + + +++G GL EE
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 410 RLVFNSMESLHGISPDRDHFSCMV 433
+F M+ G PD ++ ++
Sbjct: 540 YTLFIKMKE-DGPLPDSGTYNTLI 562
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/400 (18%), Positives = 168/400 (42%), Gaps = 55/400 (13%)
Query: 33 IDLALKLFDEL----PERNLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCY 88
+D A+ LF E+ P ++ ++ +L ++ FD ++ ++++ V N ++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 89 LIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSF-QAIPM 147
+I + + G ++K+G+ +I N+L++ + +SEA Q + M
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGY-GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 148 ---EDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFG 204
D +++ +++ + +A+ L+ M G +P + ++ +N K G
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 205 MQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE----CCNSLMT 260
+ + ++ G V + S +ID K + +A++ + + + +SL++
Sbjct: 225 LNL-LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 261 SLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGY 320
L + G D + M++ I + VTF+
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFN----------------------------- 314
Query: 321 ESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLGKQCLE 376
SLIDA+ + G ++ ++K+F+++ PN+ + S+INGF + + +
Sbjct: 315 --------SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 377 MLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSM 416
+ M+ K PD VT+ ++ G + V +G +F M
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 79/170 (46%)
Query: 320 YESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLE 379
+ D ++ +I + + +++VF+ + ++ + ++ ++ NG+G L + E
Sbjct: 267 FRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFE 326
Query: 380 AMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMVXXXXXX 439
M + GLKP+ TFL V C+ G +EE L F+SM++ HGISP +H+ ++
Sbjct: 327 EMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKC 386
Query: 440 XXXXXXXXXXXQTPGRGDCVMWSSLLRSCRVHRNETVGRRAAKILLGLDP 489
P W ++ R+H + + ++++ +DP
Sbjct: 387 GHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Query: 54 VLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVG 113
V+R C+ L+ + + L ++ + + E F L C+N + + ++H H ++
Sbjct: 212 VMR-LCQRRLYKDAIELLDKGAMPDREC----FVLLFESCANLKSLEHSKKVHDHFLQSK 266
Query: 114 WVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELL 173
+ + + N ++ + C +++AK+ F + +D+ SW+ M+ Y+DNG+ DAL L
Sbjct: 267 FR-GDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLF 325
Query: 174 YIMQFWGKKPSIRSFVG-FLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYG 232
M G KP+ +F+ FL ++ G + + G + H ++ + G
Sbjct: 326 EEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHY-LGVLGVLG 384
Query: 233 KCGDIKNAVSTYESLP 248
KCG + A LP
Sbjct: 385 KCGHLVEAEQYIRDLP 400
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 154/385 (40%), Gaps = 45/385 (11%)
Query: 49 ATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGH 108
AT L+L CE GL + + + ++ + N ++F LI G K + ++
Sbjct: 854 ATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEE 913
Query: 109 VIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMED-----VLSWNSMLSVYADN 163
+++ GW N++ AL+D G +A + F + D V ++ SM+ Y
Sbjct: 914 MVRNGW-KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKE 972
Query: 164 GLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHV 223
A L M+ G P++ ++ +N K G+ FG
Sbjct: 973 DKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS--FGRAYE--------------- 1015
Query: 224 QSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEGI 283
L+++ G G + N + TY N+ + SL + +E+ G+
Sbjct: 1016 ---LMNLMGDEGFMPN-IYTY-----------NAAIDSLCKKSRAPEAYELLNKAFSCGL 1060
Query: 284 GLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLS 343
D VT++ C K G+E+D+ ++ LI A+ R + S
Sbjct: 1061 EADGVTYTI--LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 1118
Query: 344 QKVFEQIP----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTG 399
+++F+ + +P +TS+I+ + G L+ M R G PD T+ +++G
Sbjct: 1119 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 1178
Query: 400 CSHSGLVEEGRLVFNSMESLHGISP 424
+V+E ++ +M G+SP
Sbjct: 1179 LCKKSMVDEACKLYEAMID-RGLSP 1202
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/440 (20%), Positives = 187/440 (42%), Gaps = 21/440 (4%)
Query: 10 KLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELGLFD 65
+LG NLY + L+ + R I LAL L ++ E ++ T + +L G+C
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 66 ELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANAL 125
+ + L +++ + ++F LI G E L +++ G N+ +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVV 231
Query: 126 VDFYSACGCLSEA---KKSFQAIPME-DVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
V+ G + A +A +E +V+ +++++ DAL L M+ G
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAV 241
+P++ ++ ++ ++ +I+ N +V +ALID + K G + A
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKI-NPNVVTFNALIDAFVKEGKLVEAE 350
Query: 242 STYESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXX 297
Y+ + S++ +SL+ +D+ MF LM+ + + VT++T
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 298 XXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL----P 353
+ G + +LI + ++ +Q VF+Q+ P
Sbjct: 411 CKAKRIDEGVELFREMS--QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 354 NVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVF 413
N+ + ++++G NG ++ + + E + R ++P T+ ++ G +G VE+G +F
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 414 NSMESLHGISPDRDHFSCMV 433
S+ SL G+ PD ++ M+
Sbjct: 529 CSL-SLKGVKPDVIIYNTMI 547
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 158/404 (39%), Gaps = 52/404 (12%)
Query: 36 ALKLFDELPER----NLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIR 91
A+ L D + +R NL T+ +V+ G C+ G D L N+++ +E N + + +I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 92 GCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVL 151
R D+ L + G V N+ ++L+ +C C E
Sbjct: 269 SLCKYRHEDDALNLFTEMENKG-VRPNVITYSSLI----SCLCNYE-------------- 309
Query: 152 SWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCV 211
W+ DA LL M P++ +F ++ K G + +++ +
Sbjct: 310 RWS-------------DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 212 IKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLEC------CNSLMTSLLHC 265
IK D + S+LI+ + + A +E M S +C N+L+
Sbjct: 357 IKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFEL--MISKDCFPNVVTYNTLINGFCKA 413
Query: 266 GIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVS 325
+D+ E+F M G+ + VT++T + G ++
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ--MVSDGVHPNIM 471
Query: 326 VSCSLIDAYLRSGHVLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLGKQCLEMLEAM 381
+L+D ++G + + VFE + P ++ + +I G G + ++ ++
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 382 IRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPD 425
KG+KPD + + +++G GL EE +F M G PD
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE-DGPLPD 574
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/381 (19%), Positives = 162/381 (42%), Gaps = 22/381 (5%)
Query: 51 WNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVI 110
+ +LR D+ +GL+ + + F L+ + + FD L +
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 111 KVGWVDTNIFVANALVDFYSACGCLSEA----KKSFQAIPMEDVLSWNSMLSVYADNGLF 166
++G + N++ N L++ + +S A K + +++ +S+L+ Y
Sbjct: 113 RLG-ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 167 LDALELLYIMQFWGKKPSIRSFVGFLN---LSSKTGNALFGMQIHCCVIKMGFDNGSVHV 223
DA+ L+ M G +P +F ++ L +K A+ + +++ G V
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR---MVQRGCQPNLV-T 227
Query: 224 QSALIDMYGKCGDIKNAVSTYESLPMTSLEC----CNSLMTSLLHCGIVDDVFEMFGLMV 279
+++ K GDI A + + +E ++++ SL DD +F M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 280 DEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGH 339
++G+ + +T+S+ K+ +V +LIDA+++ G
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN--PNVVTFNALIDAFVKEGK 345
Query: 340 VLLSQKVFEQIPL----PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLC 395
++ ++K+++++ P++F ++S+INGF + + M E MI K P+ VT+
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 396 VLTGCSHSGLVEEGRLVFNSM 416
++ G + ++EG +F M
Sbjct: 406 LINGFCKAKRIDEGVELFREM 426
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/402 (19%), Positives = 157/402 (39%), Gaps = 55/402 (13%)
Query: 7 RAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELG 62
R ++ G NL +V + G IDLA L +++ E N+ ++ V+ C+
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYR 274
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
D+ L L+ E++ V N +++ LI N + + S+L +I+ ++ N+
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK-INPNVVTF 333
Query: 123 NALVDFYSACGCLSEAKKSFQAIPME----DVLSWNSMLSVYADNGLFLDALELLYIMQF 178
NAL+D + G L EA+K + + D+ +++S+++ + + +A + +M
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM-- 391
Query: 179 WGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIK 238
+ K F N V + LI+ + K I
Sbjct: 392 --------------------------------ISKDCFPN--VVTYNTLINGFCKAKRID 417
Query: 239 NAVSTYESLPMTSLECCNSLMTSLLH----CGIVDDVFEMFGLMVDEGIGLDEVTFSTXX 294
V + + L T+L+H D+ +F MV +G+ + +T++T
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 295 XXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPL-- 352
+ K+ E + +I+ ++G V +F + L
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKM--EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 353 --PNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVT 392
P+V + ++I+GF GL ++ + M G PD T
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 7 RAIKLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELPERNL----ATWNLVLRGFCELG 62
R ++ GF N ++ + + G LA++L ++ ERN+ +++++ G C+ G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 63 LFDELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVA 122
D L+NE+++ + + +++ LI G N +D+G++L +IK + N+
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK-RKISPNVVTF 336
Query: 123 NALVDFYSACGCLSEA----KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQF 178
+ L+D + G L EA K+ Q + +++NS++ + +A++++ +M
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 179 WGKKPSIRSFVGFLN 193
G P I +F +N
Sbjct: 397 KGCDPDIMTFNILIN 411
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 179/430 (41%), Gaps = 59/430 (13%)
Query: 19 IGSSLVGLYMRLGLIDLALKLFDELPERNLATWNLVLRGFCELGLFDELLGLYNEIKLDN 78
+ S LVG+ +DL + P + +N + + ++ +L L +++
Sbjct: 60 LSSGLVGIKAD-DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 79 VELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGW-VDTNIFVANALVDFYSACGCLSE 137
+ + + +I R G ++K+G+ DT IF N L++ +SE
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIF--NTLLNGLCLECRVSE 176
Query: 138 A----KKSFQAIPMEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLN 193
A + + +++ N++++ NG DA+ L+ M G +P+ ++ LN
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 194 LSSKTGNALFGMQIHCCVIKMGFDNGSVHV--QSALIDMYGKCGDIKNAVSTYESLPMTS 251
+ K+G M++ + KM N + S +ID K G + NA + + + +
Sbjct: 237 VMCKSGQTALAMEL---LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 252 LEC----CNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXX 307
+ N+L+ + G DD ++ M+ I + VTFS
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV--------------- 338
Query: 308 XXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIIN 363
LID++++ G + + ++ +++ PN + S+I+
Sbjct: 339 ----------------------LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 364 GFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGIS 423
GF ++ ++M++ MI KG PD +TF ++ G + +++G +F M SL G+
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-SLRGVI 435
Query: 424 PDRDHFSCMV 433
+ ++ +V
Sbjct: 436 ANTVTYNTLV 445
>AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13490251-13491458 FORWARD
Length = 369
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 153/343 (44%), Gaps = 27/343 (7%)
Query: 108 HVIKVGWVDTNIFVANALVDFYSACGCLSEAKKS--FQAIPME------DVLSWNSMLSV 159
++K+G ++ +I A++LV+ + CLS + K + A ME DV+ ++
Sbjct: 3 KMMKLG-IEPDIVTASSLVNGF----CLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 57
Query: 160 YADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNG 219
N L + ALE+L M+ G P++ ++ + K+G L + + N
Sbjct: 58 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGR-LADAERRLHEMDSKKINP 116
Query: 220 SVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMF 275
+V SALID Y K G + S Y+ + S++ +SL+ L VD+ +M
Sbjct: 117 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML 176
Query: 276 GLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC-SLIDAY 334
LM+ +G + VT+ST + G ++ +VSC +LI Y
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP--QRGVAAN-TVSCNTLIKGY 233
Query: 335 LRSGHVLLSQKVFEQIP----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDR 390
++G + L+ VF + +PN+ + ++ G NG ++ L E M + D
Sbjct: 234 FQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDI 293
Query: 391 VTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
+T+ ++ G + +V+E +F ++ + PD ++ M+
Sbjct: 294 ITYTIMIHGMCKACMVKEAYDLFYKLK-FKRVEPDFKAYTIMI 335
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 138/342 (40%), Gaps = 37/342 (10%)
Query: 110 IKVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIP----MEDVLSWNSMLSVYADNGL 165
+K G + +++ +VD + G + +A+K F + +V+++ +++ Y
Sbjct: 468 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 527
Query: 166 FLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQI--HCCVIK---------M 214
A EL M G P+I ++ ++ K G QI C K
Sbjct: 528 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 587
Query: 215 GFDNGS----VHVQSALIDMYGKCGDIKNAVSTYESLPMTSLE----CCNSLMTSLLHCG 266
+D+ S V AL+D + K ++ A +++ M E ++L+ L G
Sbjct: 588 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 647
Query: 267 IVDDVFEMFGLMVDEGIGLDEVTFSTXX----XXXXXXXXXXXXXXXXXHCCAIKLGYES 322
+D+ E+ M + G T+S+ + CA
Sbjct: 648 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA------P 701
Query: 323 DVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIINGFAWNGLGKQCLEML 378
+V + +ID + G + K+ + + PNV +T++I+GF G + CLE+L
Sbjct: 702 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 761
Query: 379 EAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLH 420
E M KG+ P+ VT+ ++ C +G ++ + M+ H
Sbjct: 762 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 803
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/450 (19%), Positives = 171/450 (38%), Gaps = 61/450 (13%)
Query: 12 GFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELGLFDEL 67
G F+ + S+++ R GL+ A + F EL E T+N +L+ F + G++ E
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 68 LGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVD 127
L + E++ ++ + +++ L+ F E + + + K G V N ++D
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG-VMPNAITYTTVID 394
Query: 128 FYSACGCLSEAKKSFQAIP----MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKP 183
Y G EA K F ++ + + ++N++LS+ + +++L M+ G P
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 184 SIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVST 243
+ ++ L L G F ++ + GF+ + LI YG+CG +A
Sbjct: 455 NRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDR-DTFNTLISAYGRCGSEVDASKM 513
Query: 244 YESLPMTSLECC----NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXX 299
Y + C N+L+ +L G + M +G E ++S
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS-------- 565
Query: 300 XXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPNVFC-- 357
C A Y + I+ ++ G + S + + L N C
Sbjct: 566 ---------LMLQCYAKGGNY-----LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 358 ----------------------FTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLC 395
F S+++ F N + Q +LE++ GL PD VT+
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 396 VLTGCSHSGLVEEGRLVFNSMESLHGISPD 425
++ G + + ++E + PD
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQ-LKPD 700
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 127/313 (40%), Gaps = 21/313 (6%)
Query: 136 SEAKKSFQAIPME----DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGF 191
S A K IP++ DV ++ ++L Y+ G + A++L M+ G P++ ++
Sbjct: 192 SVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVI 251
Query: 192 LNLSSKTGNA---LFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLP 248
L++ K G + + G+ + FD + S ++ + G ++ A + L
Sbjct: 252 LDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTC---STVLSACAREGLLREAKEFFAELK 308
Query: 249 MTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXX 304
E N+L+ G+ + + M + D VT++
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK 368
Query: 305 XXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTS 360
K G + ++IDAY ++G + K+F + +PN + +
Sbjct: 369 EAAGVIE--MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 361 IINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLH 420
+++ + ++ML M G P+R T+ +L C + G+ + VF M+S
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC- 485
Query: 421 GISPDRDHFSCMV 433
G PDRD F+ ++
Sbjct: 486 GFEPDRDTFNTLI 498
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/398 (17%), Positives = 154/398 (38%), Gaps = 64/398 (16%)
Query: 21 SSLVGLYMRLGLIDLALKLFDEL----PERNLATWNLVLRGFCELGL-FDELLGLYNEIK 75
++++ Y R G + A+ LF+ + P L T+N++L F ++G + ++LG+ +E++
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 76 LDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCL 135
++ + + ++ C+ + E + + G+ + NAL+ + G
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY-EPGTVTYNALLQVFGKAGVY 332
Query: 136 SEAKKSFQAIPME----DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGF 191
+EA + + D +++N +++ Y G +A ++ +M G P+ ++
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY--- 389
Query: 192 LNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTS 251
+ +ID YGK G A+ + S M
Sbjct: 390 ---------------------------------TTVIDAYGKAGKEDEALKLFYS--MKE 414
Query: 252 LECC------NSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFSTXXXX--XXXXXXX 303
C N++++ L +++ +M M G + T++T
Sbjct: 415 AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKF 474
Query: 304 XXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHVLLSQKVFEQIPLPN----VFCFT 359
C G+E D +LI AY R G + + K++ ++ V +
Sbjct: 475 VNRVFREMKSC----GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYN 530
Query: 360 SIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVL 397
+++N A G + ++ M KG KP ++ +L
Sbjct: 531 ALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 136/351 (38%), Gaps = 49/351 (13%)
Query: 129 YSACGCLSEAKKSFQAIPMED----VLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPS 184
Y G + EA F+ + D V S+N+++SV D+G F A ++ M+ G P
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 185 IRSFVGFLNLSSKTGNALFGMQ--------------IHCCVIKMGFDNGSVHVQ------ 224
+ SF + KT ++ + C + GF + +
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 225 --------------SALIDMYGKCGDIKNAVSTYESL----PMTSLECCNSLMTSLLHCG 266
+ L+ + K GD+K + + + +L N + L G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 267 IVDDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSV 326
+D M G ++++G D +T++ + G E D
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK--MVNEGLEPDSYT 323
Query: 327 SCSLIDAYLRSGHVLLSQKVFEQIP----LPNVFCFTSIINGFAWNGLGKQCLEMLEAMI 382
+LI Y + G V L++++ +P+ F + S+I+G G + L + +
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 383 RKGLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
KG+KP+ + + ++ G S+ G++ E + N M S G+ P+ F+ +V
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM-SEKGLIPEVQTFNILV 433
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 159/409 (38%), Gaps = 49/409 (11%)
Query: 38 KLFDELPER----NLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGLSFCYLIRGC 93
KL D++ +R NL T+NL ++G C+ G D + + + + + +++ LI G
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 94 SNKRFFDEGSQLHGHVIKVGWVDTNIFVANALVDFYSACGCLSEAKK-----SFQAIPME 148
F E G ++ G ++ + + N L+ Y G + A++ F +
Sbjct: 297 CKNSKFQEAEVYLGKMVNEG-LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF-VP 354
Query: 149 DVLSWNSMLSVYADNGLFLDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIH 208
D ++ S++ G AL L G KP++ ++
Sbjct: 355 DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV--------------------ILY 394
Query: 209 CCVIKMGFDNGSVHVQSALIDMYGKCGDIKNAVSTYESLPMTSLECCNSLMTSLLHCGIV 268
+IK G N + +++A + N +S +P ++ N L+ L G V
Sbjct: 395 NTLIK-GLSNQGMILEAA---------QLANEMSEKGLIP--EVQTFNILVNGLCKMGCV 442
Query: 269 DDVFEMFGLMVDEGIGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSC 328
D + +M+ +G D TF+ + G + DV
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD--VMLDNGVDPDVYTYN 500
Query: 329 SLIDAYLRSGH---VLLSQKVF-EQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRK 384
SL++ ++ V+ + K E+ PN+F F ++ + L +LE M K
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 385 GLKPDRVTFLCVLTGCSHSGLVEEGRLVFNSMESLHGISPDRDHFSCMV 433
+ PD VTF ++ G +G ++ +F ME + +S ++ ++
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 171/437 (39%), Gaps = 63/437 (14%)
Query: 33 IDLALKLFDELPER----NLATWNLVLRGFCELGLFDELLGLYNEIKLDNVELNGL---- 84
+D A +LFDE+PE+ N T+ +++RG+C+ GL D+ L L N ++ V N +
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 85 ---SFCYLIRGCSNKRFFD-----------------------EGSQLHGHVI-------- 110
SFC R +++ + EG L I
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 111 KVGWVDTNIFVANALVDFYSACGCLSEAKKSFQAIPMEDVL----SWNSMLSVYADNGLF 166
+G N N ++ + G L +AK F++I D L S+N L +G F
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 167 LDALELLYIMQFWGKKPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDNGSVHVQSA 226
++A +L M G PSI S+ ++ K G I + + G +V
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAV-TYGC 401
Query: 227 LIDMYGKCGDIKNAVSTYESLP----MTSLECCNSLMTSLLHCGIVDDVFEMFGLMVDEG 282
L+ Y G + A S + + + + CN L+ SL G + + E+ M ++G
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 283 IGLDEVTFSTXXXXXXXXXXXXXXXXXXXHCCAIKLGYESDVSVSCSLIDAYLRSGHV-L 341
GLD VT + AI++ V S +L L + ++ L
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDK---------AIEIVKGMRVHGSAAL--GNLGNSYIGL 510
Query: 342 LSQKVFEQIPLPNVFCFTSIINGFAWNGLGKQCLEMLEAMIRKGLKPDRVTFLCVLTGCS 401
+ + E LP++ +++++NG G + + M+ + L+PD V + +
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570
Query: 402 HSGLVEEGRLVFNSMES 418
G + V ME
Sbjct: 571 KQGKISSAFRVLKDMEK 587
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 133/296 (44%), Gaps = 18/296 (6%)
Query: 10 KLGFGFNLYIGSSLVGLYMRLGLIDLALKLFDELP----ERNLATWNLVLRGFCELGLFD 65
+ GF + + +++VG R KL DE+ + N T+N ++ + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 66 ELLGLYNEIKLDNVELNGLSFCYLIRGCSNKRFFDEGSQLHGHVIKVGWVDTNIFVANAL 125
E + ++N+++ + + +++C LI + F D ++ ++ G + + F + +
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY-QRMQAGGLSPDTFTYSVI 475
Query: 126 VDFYSACGCLSEAKKSFQAIP----MEDVLSWNSMLSVYADNGLFLDALELLYIMQFWGK 181
++ G L A K F + +++++N M+ ++A + +AL+L MQ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 182 KPSIRSFVGFLNLSSKTGNALFGMQIHCCVIKMGFDN--GSVHVQSALIDMYGKCGDIKN 239
+P ++ + + G+ + + +M N V L+D++GK G+++
Sbjct: 536 EPDKVTYSIVMEV---LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 240 AVSTYESLPMTSLE----CCNSLMTSLLHCGIVDDVFEMFGLMVDEGIGLDEVTFS 291
A Y+++ L CNSL+++ L + + +E+ M+ G+ T++
Sbjct: 593 AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648