Jatropha Genome Database

JcCA0061381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0061381.10 - phase: 0 
         (487 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20340.1 | Symbols:  | tyrosine decarboxylase, putative | chr...   530   e-151
AT4G28680.1 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase, p...   504   e-143
AT4G28680.2 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase, p...   501   e-142

>AT2G20340.1 | Symbols:  | tyrosine decarboxylase, putative |
           chr2:8779804-8782490 FORWARD
          Length = 490

 Score =  530 bits (1365), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 246/484 (50%), Positives = 332/484 (68%), Gaps = 2/484 (0%)

Query: 1   MDSLSTNTFSPLDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYY 60
           M++ S     P+D++  ++  +++V+FI +YYK IE +PV SQVQPG+L   LP + P +
Sbjct: 1   MENGSGKVLKPMDSEQLREYGHLMVDFIADYYKTIEDFPVLSQVQPGYLHKLLPDSAPDH 60

Query: 61  PEPLEDILKDVTDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSP 120
           PE L+ +L DV   I+PG+THWQSP+FFAY+ +N S AGFLGEML +G  +VGF+W++SP
Sbjct: 61  PETLDQVLDDVRAKILPGVTHWQSPSFFAYYPSNSSVAGFLGEMLSAGLGIVGFSWVTSP 120

Query: 121 AATELESLVMDWMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDK 180
           AATELE +V+DW+             G GGGV+ GS  EA++  L AARDK L+++G + 
Sbjct: 121 AATELEMIVLDWVAKLLNLPEQFMSKGNGGGVIQGSASEAVLVVLIAARDKVLRSVGKNA 180

Query: 181 ITKLIIYASDQTHSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGF 240
           + KL++Y+SDQTHS L K  ++ GI   N R L T  ST ++L P+ L + +  D++ G 
Sbjct: 181 LEKLVVYSSDQTHSALQKACQIAGIHPENCRVLTTDSSTNYALRPESLQEAVSRDLEAGL 240

Query: 241 YPLFLCATVGTTACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESA 300
            P FLCA VGTT+  AVDP+  L +IA    +WFH+DAAYAGSACICPE+R Y+DGVE+A
Sbjct: 241 IPFFLCANVGTTSSTAVDPLAALGKIANSNGIWFHVDAAYAGSACICPEYRQYIDGVETA 300

Query: 301 DSLSMNPHKWLLTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALS 360
           DS +MN HKW LTN DC  LW+K  + L  +LS+  EFLKN  S++  ++DYKDWQI L 
Sbjct: 301 DSFNMNAHKWFLTNFDCSLLWVKDQDSLTLALSTNPEFLKNKASQANLVVDYKDWQIPLG 360

Query: 361 RRFKALKLWIVIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLK 420
           RRF++LKLW+V+R +G   L  +IR+ I LAK FE  V  D  FEIV PR FALVCFRL 
Sbjct: 361 RRFRSLKLWMVLRLYGSETLKSYIRNHIKLAKEFEQLVSQDPNFEIVTPRIFALVCFRLV 420

Query: 421 P-RNGTNDGRELNTQLLAAVNQSGRAFLTH-GLAGGYFIRCAIGSTLTEERHVDELWKLI 478
           P ++        N +LL AVN SG+ F++H  L+G   +RCAIG+ LTEE+HV E WK+I
Sbjct: 421 PVKDEEKKCNNRNRELLDAVNSSGKLFMSHTALSGKIVLRCAIGAPLTEEKHVKEAWKII 480

Query: 479 QXTA 482
           Q  A
Sbjct: 481 QEEA 484


>AT4G28680.1 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase,
           putative | chr4:14155248-14158546 FORWARD
          Length = 545

 Score =  504 bits (1298), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 231/478 (48%), Positives = 332/478 (69%), Gaps = 6/478 (1%)

Query: 11  PLDTKTFKDESNMVVEFIEEYYKNIEK----YPVQSQVQPGFLSSKLPKTPPYYPEPLED 66
           P+D++  +++ +++V+FI +YYKN++     +PV SQVQPG+L   LP + P  PE L++
Sbjct: 59  PMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKE 118

Query: 67  ILKDVTDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSPAATELE 126
           +L DV+  I+PG+THWQSP++FAY+ ++ S AGFLGEML +G +VVGF W++SPAATELE
Sbjct: 119 LLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELE 178

Query: 127 SLVMDWMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDKITKLII 186
            +V+DW+             G GGGV+ G+ CEA++  + AARD+ L+ +G   + +L++
Sbjct: 179 IIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVV 238

Query: 187 YASDQTHSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGFYPLFLC 246
           Y SDQTHS+  K   + GI   NIR L T  ST + + P+ L + I +D+  GF P F+C
Sbjct: 239 YGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFIC 298

Query: 247 ATVGTTACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESADSLSMN 306
           ATVGTT+  AVDP+  L  IAK Y +W H+DAAYAG+ACICPE+R ++DG+E+ADS +MN
Sbjct: 299 ATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMN 358

Query: 307 PHKWLLTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALSRRFKAL 366
            HKWL  N  C  LW+K    L+D+L +  E+L+  VS+   +++YKDWQI+LSRRF++L
Sbjct: 359 AHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSL 418

Query: 367 KLWIVIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLKPRNGTN 426
           KLW+V+R +G  NL   IR  ++LAK FE +V  D  FE+V  R F+LVCFRL P +G  
Sbjct: 419 KLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDE 478

Query: 427 DG-RELNTQLLAAVNQSGRAFLTH-GLAGGYFIRCAIGSTLTEERHVDELWKLIQXTA 482
           D   E N +LLAAVN +G+ F++H  L+G + +R A+G+ LTEE+HV E W++IQ  A
Sbjct: 479 DQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHA 536


>AT4G28680.2 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase,
           putative | chr4:14155248-14158546 FORWARD
          Length = 547

 Score =  501 bits (1290), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 232/480 (48%), Positives = 332/480 (69%), Gaps = 8/480 (1%)

Query: 11  PLDTKTFKDESNMVVEFIEEYYKNIEK----YPVQSQVQPGFLSSKLPKTPPYYPEPLED 66
           P+D++  +++ +++V+FI +YYKN++     +PV SQVQPG+L   LP + P  PE L++
Sbjct: 59  PMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKE 118

Query: 67  ILKDVTDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSPAATELE 126
           +L DV+  I+PG+THWQSP++FAY+ ++ S AGFLGEML +G +VVGF W++SPAATELE
Sbjct: 119 LLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELE 178

Query: 127 SLVMDWMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDKITKLII 186
            +V+DW+             G GGGV+ G+ CEA++  + AARD+ L+ +G   + +L++
Sbjct: 179 IIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVV 238

Query: 187 YASDQTHSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGFYPLFLC 246
           Y SDQTHS+  K   + GI   NIR L T  ST + + P+ L + I +D+  GF P F+C
Sbjct: 239 YGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFIC 298

Query: 247 ATVGTTACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESADSLSMN 306
           ATVGTT+  AVDP+  L  IAK Y +W H+DAAYAG+ACICPE+R ++DG+E+ADS +MN
Sbjct: 299 ATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMN 358

Query: 307 PHKWLLTNMDCCCLWIKRPNLLVDSLSSEAEFL--KNAVSESKAIIDYKDWQIALSRRFK 364
            HKWL  N  C  LW+K    L+D+L +  E+L  K  VS+   +++YKDWQI+LSRRF+
Sbjct: 359 AHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVKVSKKDTVVNYKDWQISLSRRFR 418

Query: 365 ALKLWIVIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLKPRNG 424
           +LKLW+V+R +G  NL   IR  ++LAK FE +V  D  FE+V  R F+LVCFRL P +G
Sbjct: 419 SLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDG 478

Query: 425 TNDG-RELNTQLLAAVNQSGRAFLTH-GLAGGYFIRCAIGSTLTEERHVDELWKLIQXTA 482
             D   E N +LLAAVN +G+ F++H  L+G + +R A+G+ LTEE+HV E W++IQ  A
Sbjct: 479 DEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHA 538