Jatropha Genome Database

JcCA0060881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0060881.10 + phase: 0 /partial
         (93 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G36050.1 | Symbols:  | unknown protein | chr1:13450467-134536...   152   3e-38
AT1G36050.2 | Symbols:  | unknown protein | chr1:13450467-134530...   152   4e-38
AT1G22200.1 | Symbols:  | unknown protein | chr1:7837857-7840602...   143   2e-35
AT1G22200.2 | Symbols:  | unknown protein | chr1:7838104-7840602...   143   2e-35
AT3G22290.1 | Symbols:  | unknown protein | chr3:7882082-7885260...    78   9e-16
AT3G20560.1 | Symbols: ATPDIL5-3, PDI12, ATPDI12 | ATPDIL5-3 (PD...    51   1e-07
AT1G50950.1 | Symbols:  | thioredoxin-related | chr1:18880465-18...    50   4e-07
AT4G27080.1 | Symbols: ATPDIL5-4, ATPDI7, PDI7 | thioredoxin fam...    49   4e-07
AT4G27080.2 | Symbols: ATPDIL5-4, ATPDI7, PDI7 | thioredoxin fam...    49   4e-07

>AT1G36050.1 | Symbols:  | unknown protein | chr1:13450467-13453683
           FORWARD
          Length = 489

 Score =  152 bits (385), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 73/86 (84%), Positives = 78/86 (90%)

Query: 8   LALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK 67
           L  S LRLYLH VTETKL+VDTSRGETLRINFD+TFPAL CSILS+DAMDISGE HLDVK
Sbjct: 42  LFFSELRLYLHTVTETKLIVDTSRGETLRINFDITFPALACSILSVDAMDISGELHLDVK 101

Query: 68  HDIIKKRLDSHGNVIEARQDGIGAPK 93
           HDIIK+RLDS+GN IEARQDGIGA K
Sbjct: 102 HDIIKRRLDSNGNTIEARQDGIGATK 127


>AT1G36050.2 | Symbols:  | unknown protein | chr1:13450467-13453055
           FORWARD
          Length = 386

 Score =  152 bits (384), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 73/86 (84%), Positives = 78/86 (90%)

Query: 8   LALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK 67
           L  S LRLYLH VTETKL+VDTSRGETLRINFD+TFPAL CSILS+DAMDISGE HLDVK
Sbjct: 42  LFFSELRLYLHTVTETKLIVDTSRGETLRINFDITFPALACSILSVDAMDISGELHLDVK 101

Query: 68  HDIIKKRLDSHGNVIEARQDGIGAPK 93
           HDIIK+RLDS+GN IEARQDGIGA K
Sbjct: 102 HDIIKRRLDSNGNTIEARQDGIGATK 127


>AT1G22200.1 | Symbols:  | unknown protein | chr1:7837857-7840602
           REVERSE
          Length = 386

 Score =  143 bits (361), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 67/86 (77%), Positives = 76/86 (88%)

Query: 8   LALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK 67
           L  S L+LY+H VTET+L VDTSRGE LRINFDVTFPAL CSI+SLD+MDISGE+HLDV+
Sbjct: 42  LFFSELQLYIHPVTETQLRVDTSRGEKLRINFDVTFPALQCSIISLDSMDISGERHLDVR 101

Query: 68  HDIIKKRLDSHGNVIEARQDGIGAPK 93
           HDIIK+RLDS GNVIEA+QDGIG  K
Sbjct: 102 HDIIKRRLDSSGNVIEAKQDGIGHTK 127


>AT1G22200.2 | Symbols:  | unknown protein | chr1:7838104-7840602
           REVERSE
          Length = 338

 Score =  143 bits (361), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 67/86 (77%), Positives = 76/86 (88%)

Query: 8   LALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK 67
           L  S L+LY+H VTET+L VDTSRGE LRINFDVTFPAL CSI+SLD+MDISGE+HLDV+
Sbjct: 42  LFFSELQLYIHPVTETQLRVDTSRGEKLRINFDVTFPALQCSIISLDSMDISGERHLDVR 101

Query: 68  HDIIKKRLDSHGNVIEARQDGIGAPK 93
           HDIIK+RLDS GNVIEA+QDGIG  K
Sbjct: 102 HDIIKRRLDSSGNVIEAKQDGIGHTK 127


>AT3G22290.1 | Symbols:  | unknown protein | chr3:7882082-7885260
           FORWARD
          Length = 354

 Score = 78.2 bits (191), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 56/79 (70%)

Query: 4   ITQNLALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQH 63
           I   L L  L  YL+ +T  ++ VD  RGETL I+ ++TFP+LPC +LS+DA+D+SG+  
Sbjct: 37  IMATLFLHELSYYLNTLTVHQMSVDLKRGETLPIHVNMTFPSLPCDVLSVDAIDMSGKHE 96

Query: 64  LDVKHDIIKKRLDSHGNVI 82
           +D+  +I K RL+SHG++I
Sbjct: 97  VDLDTNIWKLRLNSHGHII 115


>AT3G20560.1 | Symbols: ATPDIL5-3, PDI12, ATPDI12 | ATPDIL5-3
           (PDI-LIKE 5-3); protein disulfide isomerase |
           chr3:7182182-7186390 FORWARD
          Length = 483

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 13  LRLYLHAVTETKLVVD-TSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDII 71
           L  YL   T T ++VD +S G+ LRI+F+++FPAL C   S+D  D+ G   L++   + 
Sbjct: 46  LSSYLEVNTTTAVIVDKSSDGDFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVR 105

Query: 72  KKRLDSH 78
           K  +D H
Sbjct: 106 KFPIDPH 112


>AT1G50950.1 | Symbols:  | thioredoxin-related |
           chr1:18880465-18884043 FORWARD
          Length = 484

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 13  LRLYLHAVTETKLVVD-TSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDII 71
           L  YL   T T ++VD +S G+ L I+F+++FPAL C   S+D  D+ G   L++   I 
Sbjct: 46  LSSYLAINTSTSVIVDKSSDGDFLNIDFNISFPALSCEFASVDVSDVFGTHRLNISKTIR 105

Query: 72  KKRLDSH 78
           K  +D H
Sbjct: 106 KVPIDPH 112


>AT4G27080.1 | Symbols: ATPDIL5-4, ATPDI7, PDI7 | thioredoxin family
           protein | chr4:13589156-13593335 FORWARD
          Length = 480

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 13  LRLYLHAVTETKLVVDTSR-GETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDII 71
           L  YL   T T ++VD S  G+ LR++F+++FP+L C   S+D  D+ G   L+V   I 
Sbjct: 46  LNNYLAVSTSTSVIVDRSADGDFLRLDFNISFPSLSCEFASVDVSDVLGTNRLNVTKTIR 105

Query: 72  KKRLDSH 78
           K  +DS+
Sbjct: 106 KFSIDSN 112


>AT4G27080.2 | Symbols: ATPDIL5-4, ATPDI7, PDI7 | thioredoxin family
           protein | chr4:13589156-13593335 FORWARD
          Length = 532

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 16  YLHAVTETKLVVDTSR-GETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKR 74
           YL   T T ++VD S  G+ LR++F+++FP+L C   S+D  D+ G   L+V   I K  
Sbjct: 101 YLAVSTSTSVIVDRSADGDFLRLDFNISFPSLSCEFASVDVSDVLGTNRLNVTKTIRKFS 160

Query: 75  LDSH 78
           +DS+
Sbjct: 161 IDSN 164