Jatropha Genome Database

JcCA0055861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0055861.10 + phase: 1 /pseudo/partial
         (261 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G13810.1 | Symbols: ALD1 | ALD1 (AGD2-LIKE DEFENSE RESPONSE P...   309   1e-84
AT4G33680.1 | Symbols: AGD2 | AGD2 (ABERRANT GROWTH AND DEATH 2)...   283   9e-77
AT2G22250.1 | Symbols: ATAAT, AAT, MEE17 | aminotransferase clas...    69   4e-12
AT2G22250.3 | Symbols: ATAAT, AAT, MEE17 | aminotransferase clas...    69   4e-12
AT2G22250.2 | Symbols: ATAAT, AAT, MEE17 | aminotransferase clas...    69   4e-12
AT1G77670.1 | Symbols:  | aminotransferase class I and II family...    54   1e-07

>AT2G13810.1 | Symbols: ALD1 | ALD1 (AGD2-LIKE DEFENSE RESPONSE
           PROTEIN1); catalytic/ pyridoxal phosphate binding /
           transaminase/ transferase, transferring nitrogenous
           groups | chr2:5768489-5772138 FORWARD
          Length = 456

 Score =  309 bits (792), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 150/216 (69%), Positives = 177/216 (81%), Gaps = 4/216 (1%)

Query: 43  RTDLIFFCSPNNPTGHAATRQQLEDLVKFAKENGSIIIFDSAYALYGSNDSSXSIFEIPG 102
           RTD+IFFCSPNNPTG+ A+R+QL  LV FAK NGSIIIFDSAYA +  + S  SI+EIPG
Sbjct: 212 RTDVIFFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPG 271

Query: 103 AKEVAIEISSFSKFAGFTGVRLGWTNIPXELYFS----VINDFNRVVCTCFNGASNIAQA 158
           A+EVAIE+SSFSKFAGFTGVRLGW+ IP EL +S    +INDF+R+V T FNGASNIAQA
Sbjct: 272 AREVAIEVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQA 331

Query: 159 GGLACLSSEGFMAVHSMVKYYMENAKLLLDTLAFIGPKAYGGENAPYVWVHFPGSKSWDL 218
           GGLACLSS G   + S+  YY EN K+L+DTL  +G K YGG NAPY+WVHF GSKSWD+
Sbjct: 332 GGLACLSSGGLKEIRSVNNYYKENRKILMDTLVSLGLKVYGGVNAPYLWVHFKGSKSWDV 391

Query: 219 FDEILDKTNIITVPGSGFGPRGEEFLRISAFGHRNY 254
           F+EIL+ T+IITVPGSGFGP GEE+LRIS FG R++
Sbjct: 392 FNEILENTHIITVPGSGFGPGGEEYLRISGFGRRDH 427


>AT4G33680.1 | Symbols: AGD2 | AGD2 (ABERRANT GROWTH AND DEATH 2);
           L,L-diaminopimelate aminotransferase/ transaminase |
           chr4:16171847-16174630 REVERSE
          Length = 461

 Score =  283 bits (724), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 141/214 (65%), Positives = 176/214 (82%), Gaps = 4/214 (1%)

Query: 43  RTDLIFFCSPNNPTGHAATRQQLEDLVKFAKENGSIIIFDSAYALYGSNDSSXSIFEIPG 102
           RTD+IFFCSPNNPTG AATR+QL  LV+FAK+NGSII++DSAYA+Y S+D+  SIFEIPG
Sbjct: 233 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPG 292

Query: 103 AKEVAIEISSFSKFAGFTGVRLGWTNIPXELYFS----VINDFNRVVCTCFNGASNIAQA 158
           A+EVA+E +SFSK+AGFTGVRLGWT IP +L +S    V  DFNR++CTCFNGASNI+QA
Sbjct: 293 AEEVAMETASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQA 352

Query: 159 GGLACLSSEGFMAVHSMVKYYMENAKLLLDTLAFIGPKAYGGENAPYVWVHFPGSKSWDL 218
           G LACL+ EG  A+H ++ +Y EN  +++DT   +G   YGG+NAPYVWVHFP   SWD+
Sbjct: 353 GALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDV 412

Query: 219 FDEILDKTNIITVPGSGFGPRGEEFLRISAFGHR 252
           F EIL+KT+++T PGSGFGP GE F+R+SAFGHR
Sbjct: 413 FAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHR 446


>AT2G22250.1 | Symbols: ATAAT, AAT, MEE17 | aminotransferase class I
           and II family protein | chr2:9458011-9460028 REVERSE
          Length = 428

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 29/226 (12%)

Query: 42  KRTDLIFFCSPNNPTGHAATRQQLEDLVK-FAKENGSIIIFDSAYA--LYGSNDSSXSIF 98
           +++ L+  CSP+NPTG    +  LE++ +  AK    +++ D  Y   +Y     + S  
Sbjct: 184 EKSRLLILCSPSNPTGSVYPKSLLEEIARIIAKHPRLLVLSDEIYEHIIYAPATHT-SFA 242

Query: 99  EIPGAKEVAIEISSFSKFAGFTGVRLGWTNIPXELYFSVINDFNRVVCTCFNGASNIAQA 158
            +P   E  + ++ FSK    TG RLG+   P      ++   +++     +GAS+IAQ 
Sbjct: 243 SLPDMYERTLTVNGFSKAFAMTGWRLGYLAGP----KHIVAACSKLQGQVSSGASSIAQK 298

Query: 159 GGLAC--LSSEGFMAVHSMVKYYMENAKLLLDTLAFI-GPKAYGGENAPYVWVHFPG--- 212
            G+A   L   G   V  MVK Y E    L+ +L  I G K    + A Y+++ F     
Sbjct: 299 AGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKISEPQGAFYLFIDFSAYYG 358

Query: 213 -----------SKSWDLFDEILDKTNIITVPGSGFGPRGEEFLRIS 247
                      S S  L+   LDK  +  VPG  FG   +  +RIS
Sbjct: 359 SEAEGFGLINDSSSLALY--FLDKFQVAMVPGDAFG--DDSCIRIS 400


>AT2G22250.3 | Symbols: ATAAT, AAT, MEE17 | aminotransferase class I
           and II family protein | chr2:9458011-9460297 REVERSE
          Length = 475

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 29/226 (12%)

Query: 42  KRTDLIFFCSPNNPTGHAATRQQLEDLVK-FAKENGSIIIFDSAYA--LYGSNDSSXSIF 98
           +++ L+  CSP+NPTG    +  LE++ +  AK    +++ D  Y   +Y     + S  
Sbjct: 231 EKSRLLILCSPSNPTGSVYPKSLLEEIARIIAKHPRLLVLSDEIYEHIIYAPATHT-SFA 289

Query: 99  EIPGAKEVAIEISSFSKFAGFTGVRLGWTNIPXELYFSVINDFNRVVCTCFNGASNIAQA 158
            +P   E  + ++ FSK    TG RLG+   P      ++   +++     +GAS+IAQ 
Sbjct: 290 SLPDMYERTLTVNGFSKAFAMTGWRLGYLAGP----KHIVAACSKLQGQVSSGASSIAQK 345

Query: 159 GGLAC--LSSEGFMAVHSMVKYYMENAKLLLDTLAFI-GPKAYGGENAPYVWVHFPG--- 212
            G+A   L   G   V  MVK Y E    L+ +L  I G K    + A Y+++ F     
Sbjct: 346 AGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKISEPQGAFYLFIDFSAYYG 405

Query: 213 -----------SKSWDLFDEILDKTNIITVPGSGFGPRGEEFLRIS 247
                      S S  L+   LDK  +  VPG  FG   +  +RIS
Sbjct: 406 SEAEGFGLINDSSSLALY--FLDKFQVAMVPGDAFG--DDSCIRIS 447


>AT2G22250.2 | Symbols: ATAAT, AAT, MEE17 | aminotransferase class I
           and II family protein | chr2:9458011-9460297 REVERSE
          Length = 475

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 29/226 (12%)

Query: 42  KRTDLIFFCSPNNPTGHAATRQQLEDLVK-FAKENGSIIIFDSAYA--LYGSNDSSXSIF 98
           +++ L+  CSP+NPTG    +  LE++ +  AK    +++ D  Y   +Y     + S  
Sbjct: 231 EKSRLLILCSPSNPTGSVYPKSLLEEIARIIAKHPRLLVLSDEIYEHIIYAPATHT-SFA 289

Query: 99  EIPGAKEVAIEISSFSKFAGFTGVRLGWTNIPXELYFSVINDFNRVVCTCFNGASNIAQA 158
            +P   E  + ++ FSK    TG RLG+   P      ++   +++     +GAS+IAQ 
Sbjct: 290 SLPDMYERTLTVNGFSKAFAMTGWRLGYLAGP----KHIVAACSKLQGQVSSGASSIAQK 345

Query: 159 GGLAC--LSSEGFMAVHSMVKYYMENAKLLLDTLAFI-GPKAYGGENAPYVWVHFPG--- 212
            G+A   L   G   V  MVK Y E    L+ +L  I G K    + A Y+++ F     
Sbjct: 346 AGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKISEPQGAFYLFIDFSAYYG 405

Query: 213 -----------SKSWDLFDEILDKTNIITVPGSGFGPRGEEFLRIS 247
                      S S  L+   LDK  +  VPG  FG   +  +RIS
Sbjct: 406 SEAEGFGLINDSSSLALY--FLDKFQVAMVPGDAFG--DDSCIRIS 447


>AT1G77670.1 | Symbols:  | aminotransferase class I and II family
           protein | chr1:29189043-29190901 REVERSE
          Length = 440

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 44/95 (46%)

Query: 43  RTDLIFFCSPNNPTGHAATRQQLEDLVKFAKENGSIIIFDSAYALYGSNDSSXSIFEIPG 102
           +T  I   +P+NPTG   TR++LE +     EN  ++  D  Y          SI  +PG
Sbjct: 212 KTRAILMNTPHNPTGKMFTREELETIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPG 271

Query: 103 AKEVAIEISSFSKFAGFTGVRLGWTNIPXELYFSV 137
             E  + ++S  K    TG ++GW   P  L + V
Sbjct: 272 MYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGV 306