Jatropha Genome Database

JcCA0046261.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0046261.40 - phase: 0 
         (596 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05480.1 | Symbols:  | unknown protein | chr5:1622338-1624164...   597   e-170
AT3G14920.1 | Symbols:  | unknown protein | chr3:5018275-5020104...   377   e-104

>AT5G05480.1 | Symbols:  | unknown protein | chr5:1622338-1624164
           REVERSE
          Length = 608

 Score =  597 bits (1538), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 307/566 (54%), Positives = 401/566 (70%), Gaps = 18/566 (3%)

Query: 24  SPDHYFKNLSPTLKTTFSKPKYKEYFELIRPLPFDHLTPSYAHHIIHHTFANTVNRPPYT 83
           SPD + ++ S  L+   S  + +EY EL RPLP D LTPS +H +  H+FANT+NRPP+T
Sbjct: 28  SPDRFLRSASTCLR---SPVEPQEYEELRRPLPSDQLTPSCSHVLFRHSFANTINRPPFT 84

Query: 84  VPYDPPTGCPAP-WLRVALEFRANSRGDQYDRIAGLWLGGAELLRTSTAEPTESGIYWSV 142
            PY PP+ C +P W  V L+ RA S GDQYDRI+GLWLGG ELLRTSTAEP+ SGI+W+V
Sbjct: 85  TPYTPPSSCISPPWSYVVLDLRAASSGDQYDRISGLWLGGVELLRTSTAEPSPSGIFWNV 144

Query: 143 RKDITRYSYLLKQRNLNFSIMLENIVNDVYTGVYHIDVTIFYYKDTTVRAPLMGNNFISL 202
           RKD++RYS L  + +LN ++MLENIVNDVYTG+YHI+VT+ +Y+      P+  N  IS 
Sbjct: 145 RKDVSRYSSLFMRSDLNVTMMLENIVNDVYTGIYHINVTLIFYEFN----PIASNLKIS- 199

Query: 203 FTKKQGLIREERLANGVYESPADLIIPISSFHDSKGHWFRIEGESDAHLKKLRFPSNTHR 262
              + G +  ++      ++PADLIIP+     ++G WF IE   + + K ++ PSNT +
Sbjct: 200 --NRLGFVDSQKRD----QTPADLIIPVCD-GGNRGFWFMIENPRETYSKGIQIPSNTRQ 252

Query: 263 AILELYVSFHGNDEFWYSNPSNTYIRMNNLTTLRGNGAFREVFVTIDGMFVDSEVPFPVI 322
            +LELYVSFHGNDEFWYSNP N+YIR NNLTT RGNGA+REVFV IDG +V SEVPFPVI
Sbjct: 253 IVLELYVSFHGNDEFWYSNPPNSYIRTNNLTTGRGNGAYREVFVKIDGRYVGSEVPFPVI 312

Query: 323 FTGGINPLFWEPAVAIGAFDLPTYDFDLTPFLGILLDGKDHMIGVGVSDSIPYWLVDANL 382
           FTGGINPLFWEP VAIGAF+LP+YD DLTPFLG+LLDGK H    GV+D I YWLVDANL
Sbjct: 313 FTGGINPLFWEPVVAIGAFNLPSYDMDLTPFLGLLLDGKSHEFAFGVNDGISYWLVDANL 372

Query: 383 HLWLDTGLASVEAKSVVYENPGSSVKRQEEFRMLDGSFAIKGTRKTQLVGWIKSSLGNFT 442
           HLWLD G ++VEA S +Y++P   + RQE+   LDGSF ++    ++  GW++SS GN T
Sbjct: 373 HLWLDHGSSNVEAGSRLYDSPSRHMMRQEQLEQLDGSFKVEAEVSSEYDGWVRSSKGNLT 432

Query: 443 TSVMHQYKFRSSVRFGKNGNHKNVKQNLKSKREVKVMNEMGILLSRATVKRKYPLKVVTL 502
           T V   +K  S VRF KNG +K V+Q +K++R V+V +E G  ++R   +R YPL V+T 
Sbjct: 433 TMVKSMFKVDSLVRFEKNGTYKRVEQRVKTERIVEVTSESGKPVNRVVHQRTYPLTVITS 492

Query: 503 NLPG--KKKDTYKLITNVSHAFFHQYSKGMFSSSVNNKQVANGWMEVKDHDVVAGEAVTN 560
            L G    KDTY L+TNVSHA    +S G     V ++Q + GWMEV+DH+V+AGEA T 
Sbjct: 493 TLRGLTNDKDTYMLVTNVSHALNETHSDGEALIQVYSRQDSEGWMEVEDHNVLAGEASTK 552

Query: 561 QTLTWRDDSGCYVRSVAAIDGSLVRD 586
           Q+L++ D+  CY R++ A +G + +D
Sbjct: 553 QSLSYIDEFSCYSRTIVAANGEIAQD 578


>AT3G14920.1 | Symbols:  | unknown protein | chr3:5018275-5020104
           FORWARD
          Length = 609

 Score =  377 bits (968), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/558 (37%), Positives = 313/558 (56%), Gaps = 40/558 (7%)

Query: 48  YFELIRP----LPFDHLTPSYAHHIIHHTFANTVNRPPYTVPYDPPTGCPA-PWLRVALE 102
           YFE+ +P    LP      SY   I+HH F  T  +PP    Y  P+ C +  + ++ LE
Sbjct: 57  YFEVQKPPVPNLPTAQQPCSY--QILHHDFGYTYAKPPVLSNYTLPSHCSSREFSKIVLE 114

Query: 103 FRANSRGDQYDRIAGLWLGGAELLRTSTAEPTESGIYWSVRKDITRY-SYLLKQRNLNFS 161
           F++ S+G Q+DRI G+WL G E+LR+ TAEP  +GI WSV KD+T+Y S L+K      S
Sbjct: 115 FKSTSQGRQFDRIFGVWLDGVEILRSCTAEPRPNGIVWSVEKDVTKYHSLLVKNETQILS 174

Query: 162 IMLENIVNDVYTGVYHIDVTIFYYKDTTVRAPLMGNNFISLFTKKQGLIREERLANGVYE 221
           + L N+++  YTGVYH+DV   +Y+  +                        +  +G   
Sbjct: 175 VYLGNLIDKTYTGVYHVDVIFHFYQSES----------------------NLQDVSGYSS 212

Query: 222 SPADLIIPIS-SFHDSKGHWFRIEGESDAHLKKLRFPSNTHRAILELYVSFHGNDEFWYS 280
           S AD+I+PIS +   + G WF I   +D   K+   P N +RA+LE+YVSFH NDEFWY 
Sbjct: 213 SKADMILPISRNLPLNDGLWFEIVNSNDTKYKEFEIPRNVYRAVLEVYVSFHENDEFWYG 272

Query: 281 NPSNTYIRMNNLTTLRGNGAFREVFVTIDGMFVDSEVPFPVIFTGGINPLFWEPAVAIGA 340
           N  N Y+  NNL+ + GNG FREV V++DG    +  PFPV+FTGGINPL W P  AIG+
Sbjct: 273 NLPNDYVTANNLS-VAGNGPFREVVVSLDGDIAGAVWPFPVVFTGGINPLLWRPITAIGS 331

Query: 341 FDLPTYDFDLTPFLGILLDGKDHMIGVGVSDSIPYWLVDANLHLWLDTGLASVEAKSVVY 400
           FDLP+YD ++TPFLG LLDGK H +G  V++++  W +DANLHLWLD     VE K + +
Sbjct: 332 FDLPSYDIEITPFLGSLLDGKTHKVGFSVTNALNVWYIDANLHLWLDQEKEIVEGKVLDF 391

Query: 401 ENPGSSVKRQEEFRMLDGSFAIKGTRKTQLVGWIKSSLGNFTTSVMHQYKFRSSVRFGKN 460
                 +    +F+ L+G+F  K  R    VG +KSS G+  T+   ++ + + +  GK+
Sbjct: 392 SRSSLEISSVSDFKGLNGNFTTKAKRSITSVGLVKSSHGDIITNANQEFSYENKMVLGKD 451

Query: 461 GNHKNVKQNLKSKREVKVMNEMGILLSRATVKRKYPLKVVTLNLPGKKKDTYKLITNVSH 520
           GN + + Q +++   +        + +  ++K  +P  + +  L  ++ +TY  + NVS 
Sbjct: 452 GNLQIIDQLIQADDRIHAKRASREIYAAKSIK-SFPFYLDSDTLE-QQNNTYLAVANVSM 509

Query: 521 AFFHQYS---KGM---FSSSVNNKQVANGWMEVKDHDVVAGEAVTNQTLTWRDDSGCYVR 574
           AF  + S   KG+   F S + NKQ   G M VK++ VV+G   T Q   +     CY R
Sbjct: 510 AFNEERSESDKGLMRTFKSKLENKQEGQGVMVVKNNLVVSGYGSTQQVYNYVGSDQCYFR 569

Query: 575 SVAAIDGSLVRDNSTYVC 592
           ++++ + +++ D    VC
Sbjct: 570 NISSYNYTILYDKVESVC 587