Jatropha Genome Database

JcCA0046261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0046261.10 - phase: 0 
         (77 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G02100.1 | Symbols: LCR69, PDF2.2 | LCR69 (LOW-MOLECULAR-WEIG...   104   9e-24
AT2G02120.1 | Symbols: PDF2.1, LCR70 | PDF2.1; peptidase inhibit...    97   3e-21
AT2G02130.1 | Symbols: PDF2.3, LCR68 | LCR68 (LOW-MOLECULAR-WEIG...    92   6e-20
AT1G61070.1 | Symbols: LCR66, PDF2.4 | LCR66 (LOW-MOLECULAR-WEIG...    80   2e-16
AT5G63660.1 | Symbols: LCR74, PDF2.5 | PDF2.5 | chr5:25485692-25...    66   5e-12
AT2G02140.1 | Symbols: LCR72, PDF2.6 | LCR72 (LOW-MOLECULAR-WEIG...    65   6e-12
AT2G31957.1 | Symbols: LCR75, LCR79 | LCR75 (LOW-MOLECULAR-WEIGH...    53   4e-08
AT2G02147.1 | Symbols: LCR73 | LCR73 (Low-molecular-weight cyste...    50   2e-07

>AT2G02100.1 | Symbols: LCR69, PDF2.2 | LCR69
          (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69); peptidase
          inhibitor | chr2:528397-528885 FORWARD
          Length = 77

 Score =  104 bits (260), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 51/77 (66%), Positives = 56/77 (72%)

Query: 1  MKNPMRPFSAVXXXXXXXVATEIGSKMAEARTCESQSHKFKGTCLSETNCANVCKTEGFT 60
          MK  MR  SAV       VAT +G    EARTCESQSH+FKGTC+S +NCANVC  EGF 
Sbjct: 1  MKLSMRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFV 60

Query: 61 GGDCRGLRRRCFCTRHC 77
          GG+CRG RRRCFCTRHC
Sbjct: 61 GGNCRGFRRRCFCTRHC 77


>AT2G02120.1 | Symbols: PDF2.1, LCR70 | PDF2.1; peptidase
          inhibitor | chr2:538319-538842 FORWARD
          Length = 77

 Score = 96.7 bits (239), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/77 (62%), Positives = 53/77 (68%)

Query: 1  MKNPMRPFSAVXXXXXXXVATEIGSKMAEARTCESQSHKFKGTCLSETNCANVCKTEGFT 60
          MK  MR  SAV       VAT +G    EARTC SQS +FKG C+S+TNC NVC  EGF 
Sbjct: 1  MKFSMRLISAVLFLVMIFVATGMGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNEGFP 60

Query: 61 GGDCRGLRRRCFCTRHC 77
          GGDCRG RRRCFCTR+C
Sbjct: 61 GGDCRGFRRRCFCTRNC 77


>AT2G02130.1 | Symbols: PDF2.3, LCR68 | LCR68
          (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 68); peptidase
          inhibitor | chr2:540071-540407 FORWARD
          Length = 77

 Score = 92.0 bits (227), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 52/77 (67%)

Query: 1  MKNPMRPFSAVXXXXXXXVATEIGSKMAEARTCESQSHKFKGTCLSETNCANVCKTEGFT 60
          MK  +R  SA        +AT +G    EARTCES+SH+FKG C+S  NCANVC  EGF 
Sbjct: 1  MKLSVRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFG 60

Query: 61 GGDCRGLRRRCFCTRHC 77
          GG CRG RRRC+CTRHC
Sbjct: 61 GGKCRGFRRRCYCTRHC 77


>AT1G61070.1 | Symbols: LCR66, PDF2.4 | LCR66
          (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 66) |
          chr1:22492020-22492470 REVERSE
          Length = 76

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 43/59 (72%)

Query: 19 VATEIGSKMAEARTCESQSHKFKGTCLSETNCANVCKTEGFTGGDCRGLRRRCFCTRHC 77
          +AT +G    EARTCE+ S+ F G CLS +NCANVC  EGF+ GDCRG RRRC CTR C
Sbjct: 18 LATVMGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNEGFSDGDCRGFRRRCLCTRPC 76


>AT5G63660.1 | Symbols: LCR74, PDF2.5 | PDF2.5 |
          chr5:25485692-25486062 FORWARD
          Length = 73

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 28 AEARTCESQSHKFKGTCLSETNCANVCKTEGFTGGDCRGLRRRCFCTRHC 77
           E RTC+S+SH FK  C S  NCA VC+ EGF+GG C G  RRC+CTR C
Sbjct: 24 GEGRTCQSKSHHFKYMCTSNHNCAIVCRNEGFSGGRCHGFHRRCYCTRLC 73


>AT2G02140.1 | Symbols: LCR72, PDF2.6 | LCR72
          (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 72); peptidase
          inhibitor | chr2:544755-545169 FORWARD
          Length = 73

 Score = 65.5 bits (158), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 4/77 (5%)

Query: 1  MKNPMRPFSAVXXXXXXXVATEIGSKMAEARTCESQSHKFKGTCLSETNCANVCKTEGFT 60
          MK  +R  SA+        AT +G    EARTCES S+KF+G CL+  +CA  C +EGF+
Sbjct: 1  MKLSLRLISALLMSVMLLFATGMGP--VEARTCESPSNKFQGVCLNSQSCAKACPSEGFS 58

Query: 61 GGDCRGLRRRCFCTRHC 77
          GG C  L  RC+C++ C
Sbjct: 59 GGRCSSL--RCYCSKAC 73


>AT2G31957.1 | Symbols: LCR75, LCR79 | LCR75 (LOW-MOLECULAR-WEIGHT
          CYSTEINE-RICH 75) | chr2:13587709-13588187 FORWARD
          Length = 82

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 31/47 (65%)

Query: 31 RTCESQSHKFKGTCLSETNCANVCKTEGFTGGDCRGLRRRCFCTRHC 77
          + CE++S  +KG CL   NC  VC +EGFT G C+G  R+C C++ C
Sbjct: 31 QMCEAKSLDWKGMCLKWRNCRQVCISEGFTDGRCKGFTRKCICSKPC 77


>AT2G02147.1 | Symbols: LCR73 | LCR73 (Low-molecular-weight
          cysteine-rich 73) | chr2:546664-547026 FORWARD
          Length = 80

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 1  MKNPMRPFSAVXXXXXXXVATEIGSKMAEARTCESQSHKFKGTCLSETNCANVCKT-EGF 59
          MK  +R  S +       +AT       + + C+++S +F G C+S  NCA +C+  E F
Sbjct: 1  MKLSLRFLSVLLLIAFMVLATTAEVSPLDNKICKTRSDRFSGVCISTNNCAIICQQFEHF 60

Query: 60 TGGDCR--GLRRRCFCTRHC 77
           GG C   G  RRC CT+ C
Sbjct: 61 DGGHCEFDGAFRRCMCTKQC 80