Jatropha Genome Database
- JcCA0045971.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0045971.20 - phase: 0
(644 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 863 0.0
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 522 e-148
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 522 e-148
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 513 e-145
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 492 e-139
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 489 e-138
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 484 e-137
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 471 e-133
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 452 e-127
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 447 e-125
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 446 e-125
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 446 e-125
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 444 e-125
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 439 e-123
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 438 e-123
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 431 e-121
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 431 e-121
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 429 e-120
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 422 e-118
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 422 e-118
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 416 e-116
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 416 e-116
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 414 e-116
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 410 e-114
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 410 e-114
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 409 e-114
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 407 e-114
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 406 e-113
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 406 e-113
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 405 e-113
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 403 e-112
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 400 e-111
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 400 e-111
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 399 e-111
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 398 e-111
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-111
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-111
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-111
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-110
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 397 e-110
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-110
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-110
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 394 e-109
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 393 e-109
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 391 e-109
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 391 e-109
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 389 e-108
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 385 e-107
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 384 e-106
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 382 e-106
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 376 e-104
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 375 e-104
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 374 e-103
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 372 e-103
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 372 e-103
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 371 e-103
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 370 e-102
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 369 e-102
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 369 e-102
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 367 e-101
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 362 e-100
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 360 2e-99
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 358 8e-99
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 357 1e-98
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 354 1e-97
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 353 1e-97
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 353 2e-97
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 348 5e-96
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 344 8e-95
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 343 2e-94
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 342 5e-94
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 340 2e-93
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 339 3e-93
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 8e-93
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 336 2e-92
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 334 1e-91
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 333 2e-91
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 332 3e-91
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 332 5e-91
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 330 1e-90
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 330 2e-90
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 329 4e-90
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 329 4e-90
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 328 8e-90
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 324 1e-88
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 323 1e-88
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 323 2e-88
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 323 2e-88
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 321 9e-88
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 319 3e-87
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 318 5e-87
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 315 8e-86
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 308 5e-84
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 305 7e-83
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 7e-82
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 1e-81
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 2e-81
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 298 6e-81
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 298 1e-80
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 295 4e-80
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 295 6e-80
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 292 5e-79
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 2e-78
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 9e-77
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 1e-76
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 1e-76
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 2e-75
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 2e-75
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 7e-75
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 9e-75
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 4e-74
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 274 1e-73
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 272 6e-73
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 3e-72
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 7e-72
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 2e-71
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 7e-71
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 9e-71
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 1e-70
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 1e-70
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 3e-70
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 263 4e-70
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 262 5e-70
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 262 5e-70
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 8e-70
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 2e-69
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 7e-69
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 8e-69
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 2e-68
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 4e-68
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 7e-68
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 1e-67
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 1e-67
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 1e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 3e-67
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 5e-67
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 1e-66
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 249 3e-66
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 6e-66
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 3e-65
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 3e-65
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 245 5e-65
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 245 6e-65
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 2e-64
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 5e-64
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 7e-64
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 7e-64
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 8e-63
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 1e-62
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 1e-62
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 2e-62
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 2e-62
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 4e-62
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 235 6e-62
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 1e-61
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 1e-61
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 2e-61
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 3e-61
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 4e-61
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 5e-61
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 7e-61
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 229 4e-60
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 4e-60
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 3e-58
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 3e-58
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 5e-58
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 9e-58
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 4e-57
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 4e-57
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 1e-56
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 8e-56
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 4e-54
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 5e-54
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 2e-53
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 4e-53
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 8e-52
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 2e-50
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 5e-50
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 5e-50
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 5e-50
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 193 3e-49
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 7e-49
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 2e-46
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 4e-46
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 5e-46
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 6e-46
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 5e-44
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 4e-43
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 1e-41
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 161 1e-39
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 2e-39
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 5e-39
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 8e-39
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 3e-38
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 2e-37
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 1e-34
AT1G47580.1 | Symbols: | lipoyltransferase, putative | chr1:174... 135 1e-31
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 5e-26
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 110 3e-24
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 109 4e-24
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 107 3e-23
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 106 5e-23
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 6e-23
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 103 3e-22
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 6e-21
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 97 3e-20
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 5e-20
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 96 6e-20
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 5e-19
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 6e-19
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 6e-19
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 7e-19
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 92 8e-19
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 92 8e-19
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 91 2e-18
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 89 1e-17
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 87 3e-17
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 6e-17
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 6e-17
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 8e-17
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 84 3e-16
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 83 4e-16
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 5e-16
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 82 8e-16
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 82 8e-16
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 82 1e-15
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 82 1e-15
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 4e-15
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 79 6e-15
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 8e-15
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 79 1e-14
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 78 2e-14
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 5e-14
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 8e-14
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 8e-14
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 72 2e-12
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 3e-12
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 70 4e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 7e-12
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 69 1e-11
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 68 2e-11
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 66 9e-11
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 1e-10
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 64 2e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 64 3e-10
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT4G02820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 9e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 9e-09
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 58 2e-08
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 3e-08
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 57 5e-08
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 56 7e-08
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 55 1e-07
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G21880.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 7e-07
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 52 8e-07
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 52 9e-07
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 52 2e-06
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 50 4e-06
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 49 8e-06
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/628 (65%), Positives = 501/628 (79%), Gaps = 9/628 (1%)
Query: 19 LFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSD--RRDLKYARKFFTQM 76
LFPQI C++I+ L QIHA FIK+G + D LAAAEIL+F + SD RDL YA K F QM
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
NCFSWNTIIR F+E+D+D L A+ F +M S+ VEPNRFTFPSVLKACAK G
Sbjct: 86 PQRNCFSWNTIIRGFSESDED---KALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVR 196
+IQEGK+IHG +K G DEFV SNLVRMY MCG M+DA +LF + D ++
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD---MVVMT 199
Query: 197 NKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAM 256
++R ++G +VLWNVMIDG++RLGD A+R LF+KM QRSVVSWN MISGY+ NGFFK+A+
Sbjct: 200 DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAV 259
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
+VF +M+ GD+ PNY+TLVSVLPAISRLG+LELG+W+HLYAE + I IDDVLGSA+IDMY
Sbjct: 260 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 319
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
+KCG +EKAI VFE++ ++N ITWSA+I G A+HG+A DA+D + KM+QAGV P+DV Y
Sbjct: 320 SKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAY 378
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
I LL+ACSH GL+EEGR F+ MV V G+EPR+EHYGCMVD +LNMP
Sbjct: 379 INLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP 438
Query: 437 IRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVE 496
I+PDDVIWKALLGAC+M GNV+MG+RVA LM + PHDSG+YVALSN++AS+GNW V E
Sbjct: 439 IKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSE 498
Query: 497 VRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPN 556
+RL+MKE D+RKDPGCS I+IDGV+HEF+VED+SHP+AKEI SML EIS+++R AGYRP
Sbjct: 499 MRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPI 558
Query: 557 ITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISE 616
TQVLLN++EE KE+ LHYHSE+IA AFGLIST P P+RIVKNLR+CEDCHSSIKLIS+
Sbjct: 559 TTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISK 618
Query: 617 IYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+YKRKI VRDRKRFHHF+ G CSCMDYW
Sbjct: 619 VYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 522 bits (1345), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/625 (41%), Positives = 381/625 (60%), Gaps = 28/625 (4%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRD-LKYARKFFTQMNNPNC 81
+ RC ++LKQIHA +KTGL+ D A + L F S D L YA+ F + P+
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 82 FSWNTIIRAFAETDDDDYKNPLEALGFFGQM-CSEGLVEPNRFTFPSVLKACAKMGRIQE 140
F WN +IR F+ +D+ P +L + +M CS N +TFPS+LKAC+ + +E
Sbjct: 81 FLWNLMIRGFSCSDE-----PERSLLLYQRMLCSSA--PHNAYTFPSLLKACSNLSAFEE 133
Query: 141 GKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRM 200
+IH + KLG +ND + ++L+ YA+ G + A+LLF R+
Sbjct: 134 TTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFD-----------------RI 176
Query: 201 QEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFH 260
E V WN +I G+V+ G + + LF KM +++ +SW MISGY Q KEA+ +FH
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 261 DMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCG 320
+MQ DV P+ ++L + L A ++LGALE GKW+H Y K I +D VLG +IDMYAKCG
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCG 296
Query: 321 SVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLL 380
+E+A++VF+ I+ KK+ W+A+I G A HG +A+ + +MQ+ G+ P + + +L
Sbjct: 297 EMEEALEVFKNIK-KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVL 355
Query: 381 SACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPD 440
+ACS+ GL+EEG+ +F M + ++P +EHYGC+VD + MP++P+
Sbjct: 356 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 415
Query: 441 DVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLK 500
VIW ALL AC++H N+++GE + L+ + P+ G YV +NI A W E R
Sbjct: 416 AVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRL 475
Query: 501 MKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQV 560
MKE V K PGCS I ++G HEFL D SHP ++I+S + ++ GY P + ++
Sbjct: 476 MKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEM 535
Query: 561 LLNM-DEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYK 619
LL++ D++++E+ +H HSE++AI +GLI T+P T +RI+KNLRVC+DCH KLIS+IYK
Sbjct: 536 LLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYK 595
Query: 620 RKIIVRDRKRFHHFEKGVCSCMDYW 644
R I++RDR RFHHF G CSC DYW
Sbjct: 596 RDIVMRDRTRFHHFRDGKCSCGDYW 620
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 522 bits (1345), Expect = e-148, Method: Compositional matrix adjust.
Identities = 286/748 (38%), Positives = 415/748 (55%), Gaps = 111/748 (14%)
Query: 1 MNLICEPTTATRPTHPSSLFPQ-----------------IARCKSIKQLKQIHAHFIKTG 43
M L C P T ++P P + CK+++ L+ IHA IK G
Sbjct: 1 MMLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIG 60
Query: 44 LIGDPLAAAEILKFLSVSDRRD-LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNP 102
L A +++++F +S + L YA F + PN WNT+ R A + D P
Sbjct: 61 LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSD-----P 115
Query: 103 LEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASN 162
+ AL + M S GL+ PN +TFP VLK+CAK +EG++IHG V+KLG D D +V ++
Sbjct: 116 VSALKLYVCMISLGLL-PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 174
Query: 163 -------------------------------LVRMYAMCGVMEDAYLLF----------- 180
L++ YA G +E+A LF
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 234
Query: 181 ----------SNYVSHFDNNSTKLVRNKRMQEGVVV-------------------LW--- 208
NY + + N R E +V LW
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 209 ----------NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDV 258
N +ID + + G++ + LF ++P + V+SWN +I GY +KEA+ +
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 259 FHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV--LGSAVIDMY 316
F +M +PN +T++S+LPA + LGA+++G+W+H+Y +K + + L +++IDMY
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
AKCG +E A QVF I +K + +W+A+I G AMHGRA+ + D + +M++ G+ P D+ +
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLS-SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
+GLLSACSH+G+++ GR +F M + + P++EHYGCM+D + M
Sbjct: 474 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 533
Query: 437 IRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVE 496
+ PD VIW +LL ACKMHGNV++GE A L+K+ P + GSYV LSNI+AS G W V +
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAK 593
Query: 497 VRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPN 556
R + + ++K PGCS IEID V+HEF++ D+ HPR +EI MLEE+ + AG+ P+
Sbjct: 594 TRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPD 653
Query: 557 ITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISE 616
++VL M+EE KE AL +HSE++AIAFGLIST+P T L IVKNLRVC +CH + KLIS+
Sbjct: 654 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISK 713
Query: 617 IYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
IYKR+II RDR RFHHF GVCSC DYW
Sbjct: 714 IYKREIIARDRTRFHHFRDGVCSCNDYW 741
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 513 bits (1322), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/640 (41%), Positives = 393/640 (61%), Gaps = 34/640 (5%)
Query: 12 RPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDR------RD 65
R HP Q C S LK IH ++T LI D A+ +L L V D
Sbjct: 10 RFKHPKLALLQ--SCSSFSDLKIIHGFLLRTHLISDVFVASRLLA-LCVDDSTFNKPTNL 66
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
L YA F+Q+ NPN F +N +IR F+ + P +A GF+ QM + + P+ TF
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAE-----PSKAFGFYTQML-KSRIWPDNITF 120
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVS 185
P ++KA ++M + G++ H +V+ G ND +V ++LV MYA CG + A +F
Sbjct: 121 PFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFG---- 176
Query: 186 HFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISG 245
+M VV W M+ G+ + G + +R++F++MP R++ +W++MI+G
Sbjct: 177 -------------QMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMING 223
Query: 246 YAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEID 305
YA+N F++A+D+F M+ V N +VSV+ + + LGALE G+ + Y K+ + ++
Sbjct: 224 YAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVN 283
Query: 306 DVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQ 365
+LG+A++DM+ +CG +EKAI VFE + + ++++WS+II GLA+HG A+ A+ Y+ +M
Sbjct: 284 LILGTALVDMFWRCGDIEKAIHVFEGLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMI 342
Query: 366 QAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXX 425
G P DV + +LSACSH GL+E+G ++ +M K GIEPR+EHYGC+VD
Sbjct: 343 SLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKL 402
Query: 426 XXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIF 485
+L M ++P+ I ALLGACK++ N ++ ERV L+K+ P SG YV LSNI+
Sbjct: 403 AEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIY 462
Query: 486 ASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLV-EDESHPRAKEIRSMLEEI 544
A G W + +R MKE V+K PG S IEIDG I++F + +D+ HP +IR EEI
Sbjct: 463 ACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEI 522
Query: 545 SNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVC 604
+IR GY+ N ++DEE+KES++H HSE++AIA+G++ T+P T +RIVKNLRVC
Sbjct: 523 LGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVC 582
Query: 605 EDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
EDCH+ KLISE+Y R++IVRDR RFHHF GVCSC DYW
Sbjct: 583 EDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 492 bits (1267), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/643 (40%), Positives = 382/643 (59%), Gaps = 34/643 (5%)
Query: 5 CEPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILK-FLSVSDR 63
C P T P L A S+ + +H +K+ + D A ++ + S D
Sbjct: 127 CYPNKYTFPF----LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD- 181
Query: 64 RDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRF 123
L A K FT + + SWN++I F + D +AL F +M SE V+ +
Sbjct: 182 --LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD-----KALELFKKMESED-VKASHV 233
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
T VL ACAK+ ++ G+++ ++ + ++ + +A+ ++ MY CG +EDA LF
Sbjct: 234 TMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFD-- 291
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMI 243
M+E V W M+DG+ D A+R++ N MPQ+ +V+WN +I
Sbjct: 292 ---------------AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336
Query: 244 SGYAQNGFFKEAMDVFHDMQM-GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEI 302
S Y QNG EA+ VFH++Q+ ++ N ITLVS L A +++GALELG+W+H Y +K+ I
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYR 362
++ + SA+I MY+KCG +EK+ +VF +E K++ WSA+IGGLAMHG N+A+D +
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 363 KMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXX 422
KMQ+A V P V + + ACSH GL++E SLF+ M GI P +HY C+VD
Sbjct: 456 KMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 423 XXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALS 482
+ MPI P +W ALLGACK+H N+ + E L++L P + G++V LS
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 483 NIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLE 542
NI+A G W V E+R M+ ++K+PGCS IEIDG+IHEFL D +HP ++++ L
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 543 EISNRIRSAGYRPNITQVLLNMDEEK-KESALHYHSERIAIAFGLISTRPQTPLRIVKNL 601
E+ +++S GY P I+QVL ++EE+ KE +L+ HSE++AI +GLIST +R++KNL
Sbjct: 636 EVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNL 695
Query: 602 RVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
RVC DCHS KLIS++Y R+IIVRDR RFHHF G CSC D+W
Sbjct: 696 RVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 228/481 (47%), Gaps = 89/481 (18%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRD 65
+PTT + SL I RC S++QLKQ H H I+TG DP +A+++ ++S
Sbjct: 23 QPTTNNERSRHISL---IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS 79
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
L+YARK F ++ PN F+WNT+IRA+A D P+ ++ F M SE PN++TF
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPD-----PVLSIWAFLDMVSESQCYPNKYTF 134
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVS 185
P ++KA A++ + G+ +HG VK + +D FVA++L+ Y CG ++ A +F+
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTT--- 191
Query: 186 HFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISG 245
++E VV WN MI+GFV+ G + +LF KM
Sbjct: 192 --------------IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE----------- 226
Query: 246 YAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEID 305
DV +++T+V VL A +++ LE G+ V Y E+N + ++
Sbjct: 227 --------------------DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266
Query: 306 DVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNA--------------------------- 338
L +A++DMY KCGS+E A ++F+ +E K N
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 339 ---ITWSAIIGGLAMHGRANDALDYYRKMQ-QAGVTPTDVVYIGLLSACSHAGLIEEGRS 394
+ W+A+I +G+ N+AL + ++Q Q + + + LSAC+ G +E GR
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 395 LFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMH 454
+ ++ +K GI H + V N + D +W A++G MH
Sbjct: 387 IHSY-IKKHGIRMNF-HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444
Query: 455 G 455
G
Sbjct: 445 G 445
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 489 bits (1259), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/643 (40%), Positives = 387/643 (60%), Gaps = 34/643 (5%)
Query: 8 TTAT---RPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKF-LSVSDR 63
TTAT R P L I + +S+ ++ QIHA ++ L+ P LK + +
Sbjct: 18 TTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASH 77
Query: 64 RDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRF 123
++++ F Q +P+ F + I + D +A + Q+ S + PN F
Sbjct: 78 GKIRHSLALFHQTIDPDLFLFTAAINTASINGLKD-----QAFLLYVQLLSSE-INPNEF 131
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
TF S+LK+C+ + GK IH V+K GL D +VA+ LV +YA G + A +F
Sbjct: 132 TFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFD-- 185
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMI 243
RM E +V MI + + G++ A+R LF+ M +R +VSWNVMI
Sbjct: 186 ---------------RMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMI 230
Query: 244 SGYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEI 302
GYAQ+GF +A+ +F + G P+ IT+V+ L A S++GALE G+W+H++ + + I
Sbjct: 231 DGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRI 290
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYR 362
++ + + +IDMY+KCGS+E+A+ VF +K+ + W+A+I G AMHG + DAL +
Sbjct: 291 RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHGYSQDALRLFN 349
Query: 363 KMQQ-AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXX 421
+MQ G+ PTD+ +IG L AC+HAGL+ EG +F M + GI+P++EHYGC+V
Sbjct: 350 EMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGR 409
Query: 422 XXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVAL 481
+ NM + D V+W ++LG+CK+HG+ +G+ +A L+ L +SG YV L
Sbjct: 410 AGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLL 469
Query: 482 SNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSML 541
SNI+AS G++ GV +VR MKE + K+PG S IEI+ +HEF D H ++KEI +ML
Sbjct: 470 SNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTML 529
Query: 542 EEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNL 601
+IS RI+S GY PN VL +++E +KE +L HSER+AIA+GLIST+P +PL+I KNL
Sbjct: 530 RKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNL 589
Query: 602 RVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
RVC DCH+ KLIS+I RKI++RDR RFHHF G CSC D+W
Sbjct: 590 RVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 484 bits (1247), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/618 (38%), Positives = 376/618 (60%), Gaps = 24/618 (3%)
Query: 28 SIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTI 87
+ K+++QIHA G + D +K +++SD + L YA + + P F+ N++
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 88 IRAFAETDDDDYKNPLEALGFFGQMCSEGL-VEPNRFTFPSVLKACAKMGRIQEGKEIHG 146
IRA ++ P ++ F+ ++ S G ++P+ +T +++AC + + G ++HG
Sbjct: 78 IRAHCKS-----PVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHG 132
Query: 147 FVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVV 206
++ G DND V + L+ +YA G ++ + +F N + D V
Sbjct: 133 MTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVF-NSIPCPD----------------FV 175
Query: 207 LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD 266
M+ R GD+ +RKLF MP+R ++WN MISGYAQ G +EA++VFH MQ+
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 267 VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAI 326
V N + ++SVL A ++LGAL+ G+W H Y E+N+I+I L + ++D+YAKCG +EKA+
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 327 QVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
+VF +E +KN TWS+ + GLAM+G L+ + M+Q GVTP V ++ +L CS
Sbjct: 296 EVFWGME-EKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV 354
Query: 387 GLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKA 446
G ++EG+ F+ M GIEP++EHYGC+VD + MP++P +W +
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 447 LLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDV 506
LL A +M+ N+++G ++ +++L + G+YV LSNI+A +W V VR MK V
Sbjct: 415 LLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGV 474
Query: 507 RKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDE 566
RK PGCS +E++G +HEF V D+SHP+ +I ++ ++IS R+R AGY+ + T V+ ++DE
Sbjct: 475 RKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDE 534
Query: 567 EKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRD 626
E+KE AL HSE+ AIAFG++S + P+RIVKNLRVC DCH +IS+I+ R+IIVRD
Sbjct: 535 EEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRD 594
Query: 627 RKRFHHFEKGVCSCMDYW 644
R RFHHF+ G CSC +W
Sbjct: 595 RNRFHHFKDGHCSCNGFW 612
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 471 bits (1211), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/569 (41%), Positives = 354/569 (62%), Gaps = 26/569 (4%)
Query: 82 FSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEG 141
F WN IIRA ++ + + +M V P+ TFP +L + + G
Sbjct: 25 FLWNIIIRAIVHNVSSPQRH--SPISVYLRM-RNHRVSPDFHTFPFLLPSFHNPLHLPLG 81
Query: 142 KEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQ 201
+ H ++ GLD D FV ++L+ MY+ CG + A +F D+ S L
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFD------DSGSKDLPA----- 130
Query: 202 EGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHD 261
WN +++ + + G I +RKLF++MP+R+V+SW+ +I+GY G +KEA+D+F +
Sbjct: 131 ------WNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 262 MQMGD-----VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
MQ+ V PN T+ +VL A RLGALE GKWVH Y +K +EID VLG+A+IDMY
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 244
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQA-GVTPTDVV 375
AKCGS+E+A +VF + +KK+ +SA+I LAM+G ++ + +M + + P V
Sbjct: 245 AKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT 304
Query: 376 YIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNM 435
++G+L AC H GLI EG+S F M++ GI P ++HYGCMVD + +M
Sbjct: 305 FVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 364
Query: 436 PIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVV 495
P+ PD +IW +LL +M G++K E + L++L P +SG+YV LSN++A G W+ V
Sbjct: 365 PMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVK 424
Query: 496 EVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRP 555
+R +M+ + K PGCS++E++GV+HEF+V DES ++ I +ML+EI R+R AGY
Sbjct: 425 CIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVT 484
Query: 556 NITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLIS 615
+ +VLL+++E+ KE AL YHSE++AIAF L+ TRP TP+RI+KNLR+C DCH +K+IS
Sbjct: 485 DTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMIS 544
Query: 616 EIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+++ R+I+VRD RFHHF G CSC D+W
Sbjct: 545 KLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 145/353 (41%), Gaps = 83/353 (23%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
++ HA + GL DP +L S DL+ A++ F + + +WN+++ A+A
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCG--DLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 93 ET----------DDDDYKNPL----------------EALGFFGQM----CSEGLVEPNR 122
+ D+ +N + EAL F +M +E V PN
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 123 FTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSN 182
FT +VL AC ++G +++GK +H ++ K ++ D + + L+ MYA CG +E A
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERA------ 253
Query: 183 YVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKM-PQRSVVSWNV 241
+++FN + ++ V +++
Sbjct: 254 ------------------------------------------KRVFNALGSKKDVKAYSA 271
Query: 242 MISGYAQNGFFKEAMDVFHDMQMGD-VSPNYITLVSVLPAISRLGALELGK-WVHLYAEK 299
MI A G E +F +M D ++PN +T V +L A G + GK + + E+
Sbjct: 272 MICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE 331
Query: 300 NEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHG 352
I ++D+Y + G +++A + + + + W +++ G M G
Sbjct: 332 FGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/639 (37%), Positives = 379/639 (59%), Gaps = 67/639 (10%)
Query: 19 LFPQIARC---------KSIKQLKQIHAHFIKTGL-IGDP-LAAAEILKFLSVSDRRDLK 67
L P + +C SI +L+QIHA I+ G+ I D L I +S+ +
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 68 YARKFFTQMNNP-NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFP 126
YA K F+++ P N F WNT+IR +AE N + A + +M GLVEP+ T+P
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIG-----NSISAFSLYREMRVSGLVEPDTHTYP 125
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
++KA M ++ G+ IH V++ G + +V ++L+ +YA CG + AY +F
Sbjct: 126 FLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD----- 180
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGY 246
+M E +V WN +I+GF
Sbjct: 181 ------------KMPEKDLVAWNSVINGF------------------------------- 197
Query: 247 AQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD 306
A+NG +EA+ ++ +M + P+ T+VS+L A +++GAL LGK VH+Y K + +
Sbjct: 198 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 257
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQ 366
+ ++D+YA+CG VE+A +F+++ + KN+++W+++I GLA++G +A++ ++ M+
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Query: 367 A-GVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXX 425
G+ P ++ ++G+L ACSH G+++EG F M + IEPR+EH+GCMVD
Sbjct: 317 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 376
Query: 426 XXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIF 485
+ +MP++P+ VIW+ LLGAC +HG+ + E +++L P+ SG YV LSN++
Sbjct: 377 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 436
Query: 486 ASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEIS 545
AS W V ++R +M V+K PG S +E+ +HEFL+ D+SHP++ I + L+E++
Sbjct: 437 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 496
Query: 546 NRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCE 605
R+RS GY P I+ V ++++EE+KE+A+ YHSE+IAIAF LIST ++P+ +VKNLRVC
Sbjct: 497 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 556
Query: 606 DCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
DCH +IKL+S++Y R+I+VRDR RFHHF+ G CSC DYW
Sbjct: 557 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/654 (38%), Positives = 367/654 (56%), Gaps = 70/654 (10%)
Query: 7 PTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDR-RD 65
P+ +T H +F C + QLKQ+HA ++T +P K L +S D
Sbjct: 39 PSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSD 98
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
+ YA + F + N + F WNT+IRA A D EA + +M G P++ TF
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAH----DVSRKEEAFMLYRKMLERGESSPDKHTF 154
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVS 185
P VLKACA + EGK++H +VK G D +V
Sbjct: 155 PFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYV-------------------------- 188
Query: 186 HFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISG 245
NN G++ L+ G + +RK+F++MP+RS+VSWN MI
Sbjct: 189 ---NN------------GLIHLYG-------SCGCLDLARKVFDEMPERSLVSWNSMIDA 226
Query: 246 YAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKN---EI 302
+ G + A+ +F +MQ P+ T+ SVL A + LG+L LG W H + + ++
Sbjct: 227 LVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYR 362
+D ++ +++I+MY KCGS+ A QVF+ ++ K++ +W+A+I G A HGRA +A++++
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEAMNFFD 344
Query: 363 KM--QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXX 420
+M ++ V P V ++GLL AC+H G + +GR F+ MV+ IEP +EHYGC+VD
Sbjct: 345 RMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIA 404
Query: 421 XXXXXXXXXXXVLNMPIRPDDVIWKALLGAC-KMHGNVKMGERVARTLMKLFPHD----- 474
V++MP++PD VIW++LL AC K +V++ E +AR ++ +
Sbjct: 405 RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNG 464
Query: 475 --SGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHP 532
SG+YV LS ++AS W V VR M E +RK+PGCS IEI+G+ HEF D SHP
Sbjct: 465 NCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHP 524
Query: 533 RAKEIRSMLEEISNRIRSAGYRPNITQVLL--NMDEEKKESALHYHSERIAIAFGLISTR 590
+ K+I L+ I +R+RS GY P+ +Q L ++ KE +L HSER+AIAFGLI+
Sbjct: 525 QTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLP 584
Query: 591 PQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
PQTP+RI KNLRVC DCH KLIS+++ +IIVRDR RFHHF+ G CSC+DYW
Sbjct: 585 PQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/670 (35%), Positives = 373/670 (55%), Gaps = 57/670 (8%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGL----------------IGDPL 49
EPT T +++ +A + ++ K++H+ +K GL GDP+
Sbjct: 143 EPTQFT----LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 50 AAAEILKFLSVSD---------------RRDLKYARKFFTQMNNPNCFSWNTIIRAFAET 94
A + + V D + DL A+ F QM + +WN++I F +
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQ--FEQMAERDIVTWNSMISGFNQR 256
Query: 95 DDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLD 154
D L AL F +M + L+ P+RFT SVL ACA + ++ GK+IH +V G D
Sbjct: 257 GYD-----LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 155 NDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDG 214
V + L+ MY+ CG +E A +L+ + ++ + + ++DG
Sbjct: 312 ISGIVLNALISMYSRCGGVETA---------------RRLIEQRGTKDLKIEGFTALLDG 356
Query: 215 FVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITL 274
+++LGD+ ++ +F + R VV+W MI GY Q+G + EA+++F M G PN TL
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 275 VSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN 334
++L S L +L GK +H A K+ + +A+I MYAK G++ A + F+ I
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 335 KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRS 394
+++ ++W+++I LA HG A +AL+ + M G+ P + Y+G+ SAC+HAGL+ +GR
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Query: 395 LFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMH 454
F+ M V I P + HY CMVD + MPI PD V W +LL AC++H
Sbjct: 537 YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Query: 455 GNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSW 514
N+ +G+ A L+ L P +SG+Y AL+N++++ G W ++R MK+ V+K+ G SW
Sbjct: 597 KNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSW 656
Query: 515 IEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALH 574
IE+ +H F VED +HP EI +++I + I+ GY P+ VL +++EE KE L
Sbjct: 657 IEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILR 716
Query: 575 YHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFE 634
+HSE++AIAFGLIST +T LRI+KNLRVC DCH++IK IS++ R+IIVRD RFHHF+
Sbjct: 717 HHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFK 776
Query: 635 KGVCSCMDYW 644
G CSC DYW
Sbjct: 777 DGFCSCRDYW 786
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 219/507 (43%), Gaps = 81/507 (15%)
Query: 35 IHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAET 94
+H IK+GL+ ++ S + +ARK F +M FSWNT++ A+++
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYA--LHARKLFDEMPLRTAFSWNTVLSAYSKR 93
Query: 95 DDDD-----------------------YKNPLE---ALGFFGQMCSEGLVEPNRFTFPSV 128
D D YKN + A+ G M EG +EP +FT +V
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG-IEPTQFTLTNV 152
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD 188
L + A ++ GK++H F+VKLGL + V+++L+ MYA CG A +F V
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV---- 208
Query: 189 NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
VR+ + WN MI +++G + + F +M +R +V+WN MISG+ Q
Sbjct: 209 ------VRD-------ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ 255
Query: 249 NGFFKEAMDVFHDMQMGD-VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV 307
G+ A+D+F M +SP+ TL SVL A + L L +GK +H + +I +
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI 315
Query: 308 LGSAVIDMYAKCGSVEKAIQVFE-------KIEN-------------------------K 335
+ +A+I MY++CG VE A ++ E KIE
Sbjct: 316 VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375
Query: 336 KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSL 395
++ + W+A+I G HG +A++ +R M G P +LS S + G+ +
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 396 FNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHG 455
VK I V ++ + D V W +++ A HG
Sbjct: 436 HGSAVKSGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 456 NVKMGERVART-LMKLFPHDSGSYVAL 481
+ + + T LM+ D +YV +
Sbjct: 495 HAEEALELFETMLMEGLRPDHITYVGV 521
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/686 (35%), Positives = 379/686 (55%), Gaps = 68/686 (9%)
Query: 15 HPSSLFPQIARCKSIK-QLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDR-RDLKYARKF 72
H S + + + K QLKQIHA + GL + I K + S D+ +AR+
Sbjct: 19 HSDSFYASLIDSATHKAQLKQIHARLLVLGL---QFSGFLITKLIHASSSFGDITFARQV 75
Query: 73 FTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
F + P F WN IIR ++ + + +AL + M V P+ FTFP +LKAC
Sbjct: 76 FDDLPRPQIFPWNAIIRGYSRNN-----HFQDALLMYSNM-QLARVSPDSFTFPHLLKAC 129
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASN------------------------------ 162
+ + +Q G+ +H V +LG D D FV +
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVS 189
Query: 163 ---LVRMYAMCGVMEDAYLLFSN-------------------YVSHFDNNSTKLVRNKRM 200
+V YA G +A +FS + D + + +
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 201 QEGVVVLWNVMID---GFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
+ G+ + +++I + + G + ++ LF+KM +++ WN MISGYA+NG+ +EA+D
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYA 317
+FH+M DV P+ I++ S + A +++G+LE + ++ Y +++ D + SA+IDM+A
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 318 KCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYI 377
KCGSVE A VF++ ++ + + WSA+I G +HGRA +A+ YR M++ GV P DV ++
Sbjct: 370 KCGSVEGARLVFDRTLDR-DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 378 GLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPI 437
GLL AC+H+G++ EG FN M I P+ +HY C++D + MP+
Sbjct: 429 GLLMACNHSGMVREGWWFFNRMADH-KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 438 RPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEV 497
+P +W ALL ACK H +V++GE A+ L + P ++G YV LSN++A+ W V EV
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 498 RLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNI 557
R++MKE + KD GCSW+E+ G + F V D+SHPR +EI +E I +R++ G+ N
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 607
Query: 558 TQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEI 617
L ++++E+ E L HSERIAIA+GLIST TPLRI KNLR C +CH++ KLIS++
Sbjct: 608 DASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKL 667
Query: 618 YKRKIIVRDRKRFHHFEKGVCSCMDY 643
R+I+VRD RFHHF+ GVCSC DY
Sbjct: 668 VDREIVVRDTNRFHHFKDGVCSCGDY 693
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 139/253 (54%), Gaps = 18/253 (7%)
Query: 166 MYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFV--------- 216
+Y G+ D++ Y S D+ + K + K++ ++VL + GF+
Sbjct: 12 LYTNSGIHSDSF-----YASLIDSATHK-AQLKQIHARLLVL-GLQFSGFLITKLIHASS 64
Query: 217 RLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVS 276
GDI +R++F+ +P+ + WN +I GY++N F++A+ ++ +MQ+ VSP+ T
Sbjct: 65 SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPH 124
Query: 277 VLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE-NK 335
+L A S L L++G++VH + + D + + +I +YAKC + A VFE + +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 336 KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSL 395
+ ++W+AI+ A +G +AL+ + +M++ V P V + +L+A + +++GRS+
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 396 FNHMVKV-VGIEP 407
+VK+ + IEP
Sbjct: 245 HASVVKMGLEIEP 257
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/634 (36%), Positives = 363/634 (57%), Gaps = 20/634 (3%)
Query: 26 CKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWN 85
CK+++ L QIH FIK G+ D +++ ++S L YAR+ P+ F +N
Sbjct: 15 CKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFN 74
Query: 86 TIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIH 145
T++R ++E+D+ P ++ F +M +G V P+ F+F V+KA ++ G ++H
Sbjct: 75 TLVRGYSESDE-----PHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMH 129
Query: 146 GFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY------------VSHFDNNSTK 193
+K GL++ FV + L+ MY CG +E A +F + F N
Sbjct: 130 CQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVA 189
Query: 194 LVRN--KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
R +M WNVM+ G+++ G++ +++++F++MP R VSW+ MI G A NG
Sbjct: 190 GAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGS 249
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
F E+ F ++Q +SPN ++L VL A S+ G+ E GK +H + EK + +A
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNA 309
Query: 312 VIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
+IDMY++CG+V A VFE ++ K+ ++W+++I GLAMHG+ +A+ + +M GVTP
Sbjct: 310 LIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTP 369
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXX 431
+ +I LL ACSHAGLIEEG F+ M +V IEP +EHYGCMVD
Sbjct: 370 DGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDF 429
Query: 432 VLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNW 491
+ MPI P ++W+ LLGAC HGN+++ E+V + L +L P++SG V LSN +A+ G W
Sbjct: 430 ICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKW 489
Query: 492 VGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR-S 550
V +R M ++K S +E+ +++F ++ E L+EI R++
Sbjct: 490 KDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDE 549
Query: 551 AGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSS 610
AGY P + L +++EE+KE + HSE++A+AF L +RIVKNLR+C DCH+
Sbjct: 550 AGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAV 609
Query: 611 IKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+KL S++Y +I+VRDR RFH F+ G CSC DYW
Sbjct: 610 MKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/624 (36%), Positives = 359/624 (57%), Gaps = 58/624 (9%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVS-DRRDLKYARKFFTQMNNPNC 81
I++C S+++L QI A+ IK+ I D A+++ F + S + YAR F M+ P+
Sbjct: 36 ISKCNSLRELMQIQAYAIKSH-IEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 82 FSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEG 141
+N++ R ++ + NPLE F ++ +G++ P+ +TFPS+LKACA ++EG
Sbjct: 95 VIFNSMARGYSR-----FTNPLEVFSLFVEILEDGIL-PDNYTFPSLLKACAVAKALEEG 148
Query: 142 KEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQ 201
+++H +KLGLD++ +V L+ M
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINM----------------------------------- 173
Query: 202 EGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHD 261
+ D+ ++R +F+++ + VV +N MI+GYA+ EA+ +F +
Sbjct: 174 -------------YTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFRE 220
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
MQ + PN ITL+SVL + + LG+L+LGKW+H YA+K+ + +A+IDM+AKCGS
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
++ A+ +FEK+ K+ WSA+I A HG+A ++ + +M+ V P ++ ++GLL+
Sbjct: 281 LDDAVSIFEKMR-YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLN 339
Query: 382 ACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDD 441
ACSH G +EEGR F+ MV GI P ++HYG MVD + +PI P
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTP 399
Query: 442 VIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKM 501
++W+ LL AC H N+ + E+V+ + +L G YV LSN++A W V +R M
Sbjct: 400 MLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVM 459
Query: 502 KEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVL 561
K+ K PGCS IE++ V+HEF D ++ L+E+ ++ +GY P+ + V+
Sbjct: 460 KDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVV 519
Query: 562 -LNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKR 620
NM++++KE L YHSE++AI FGL++T P T +R+VKNLRVC DCH++ KLIS I+ R
Sbjct: 520 HANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGR 579
Query: 621 KIIVRDRKRFHHFEKGVCSCMDYW 644
K+++RD +RFHHFE G CSC D+W
Sbjct: 580 KVVLRDVQRFHHFEDGKCSCGDFW 603
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/541 (40%), Positives = 334/541 (61%), Gaps = 20/541 (3%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
EALG F M G V P+R + S + +C+++ I GK HG+V++ G ++ + + + L
Sbjct: 320 EALGVFNLMMDSG-VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 378
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGA 223
+ MY C + A+ +F RM VV WN ++ G+V G++ A
Sbjct: 379 IDMYMKCHRQDTAFRIFD-----------------RMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 224 SRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD-VSPNYITLVSVLPAIS 282
+ + F MP++++VSWN +ISG Q F+EA++VF MQ + V+ + +T++S+ A
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 283 RLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWS 342
LGAL+L KW++ Y EKN I++D LG+ ++DM+++CG E A+ +F + N+ + W+
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAWT 540
Query: 343 AIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV 402
A IG +AM G A A++ + M + G+ P V ++G L+ACSH GL+++G+ +F M+K+
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Query: 403 VGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGER 462
G+ P HYGCMVD + +MP+ P+DVIW +LL AC++ GNV+M
Sbjct: 601 HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAY 660
Query: 463 VARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIH 522
A + L P +GSYV LSN++AS G W + +VRL MKE +RK PG S I+I G H
Sbjct: 661 AAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTH 720
Query: 523 EFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAI 582
EF DESHP I +ML+E+S R G+ P+++ VL+++DE++K L HSE++A+
Sbjct: 721 EFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAM 780
Query: 583 AFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMD 642
A+GLIS+ T +RIVKNLRVC DCHS K S++Y R+II+RD RFH+ +G CSC D
Sbjct: 781 AYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGD 840
Query: 643 Y 643
+
Sbjct: 841 F 841
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 227/512 (44%), Gaps = 108/512 (21%)
Query: 3 LICEPTTATRPT----------HPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAA 52
++ TT T+P+ PSSL CK+I +LK H K GL D
Sbjct: 13 MVLATTTTTKPSLLNQSKCTKATPSSL----KNCKTIDELKMFHRSLTKQGLDNDVSTIT 68
Query: 53 EIL-KFLSVSDRRDLKYARKFFTQMNN-PNCFSWNTIIRAFAETDDDDYKNPLEALGFFG 110
+++ + + R L +A++ F + CF +N++IR +A + + EA+ F
Sbjct: 69 KLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCN-----EAILLFL 123
Query: 111 QMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMC 170
+M + G + P+++TFP L ACAK G +IHG +VK+G D FV ++LV YA C
Sbjct: 124 RMMNSG-ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 171 GVMEDAYLLFS-----NYVS-----------HFDNNST----KLVRNKRMQEGVVVLWNV 210
G ++ A +F N VS F ++ ++VR++ + V + V
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 211 ----------------------------------MIDGFVRLGDIGASRKLFNKMPQRSV 236
++D +++ I +++LF++ ++
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 237 VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLY 296
N M S Y + G +EA+ VF+ M V P+ I+++S + + S+L + GK H Y
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 297 AEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK--------------------- 335
+N E D + +A+IDMY KC + A ++F+++ NK
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 336 ---------KNAITWSAIIGGLAMHGRANDALDYYRKMQ-QAGVTPTDVVYIGLLSACSH 385
KN ++W+ II GL +A++ + MQ Q GV V + + SAC H
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 386 AGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
G ++ + ++ ++ K GI+ V +VD
Sbjct: 483 LGALDLAKWIYYYIEK-NGIQLDVRLGTTLVD 513
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/664 (35%), Positives = 362/664 (54%), Gaps = 66/664 (9%)
Query: 35 IHAHFIKTGLIGDPLAAAEILK----FLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRA 90
IH + G + L + I+K F V D ARK F +M + WNT+I
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVED------ARKVFDRMPEKDTILWNTMISG 194
Query: 91 FAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVK 150
+ + + +E++ F + +E + T +L A A++ ++ G +IH K
Sbjct: 195 YRKNE-----MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK 249
Query: 151 LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV------------SHFDNNSTKL---- 194
G + ++V + + +Y+ CG ++ LF + + N T+L
Sbjct: 250 TGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSL 309
Query: 195 ----------VRNKRMQEGVVVLWNVM----IDGFV--------------------RLGD 220
+R+ + V V ++M I G+ +L +
Sbjct: 310 FKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNE 369
Query: 221 IGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPA 280
I ++RKLF++ P++S+ SWN MISGY QNG ++A+ +F +MQ + SPN +T+ +L A
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 281 ISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAIT 340
++LGAL LGKWVH + E + +A+I MYAKCGS+ +A ++F+ + KKN +T
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD-LMTKKNEVT 488
Query: 341 WSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMV 400
W+ +I G +HG+ +AL+ + +M +G+TPT V ++ +L ACSHAGL++EG +FN M+
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 401 KVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMG 460
G EP V+HY CMVD + M I P +W+ LLGAC++H + +
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608
Query: 461 ERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGV 520
V+ L +L P + G +V LSNI ++ N+ VR K+ + K PG + IEI
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668
Query: 521 IHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERI 580
H F D+SHP+ KEI LE++ ++R AGY+P L +++EE++E + HSER+
Sbjct: 669 PHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERL 728
Query: 581 AIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSC 640
AIAFGLI+T P T +RI+KNLRVC DCH+ KLIS+I +R I+VRD RFHHF+ GVCSC
Sbjct: 729 AIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSC 788
Query: 641 MDYW 644
DYW
Sbjct: 789 GDYW 792
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 158/366 (43%), Gaps = 57/366 (15%)
Query: 25 RCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSW 84
R SI L Q HA I G D ++ + LS D + YAR F + P+ F +
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLS--DLGAIYYARDIFLSVQRPDVFLF 86
Query: 85 NTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEI 144
N ++R F+ + +P +L F + ++PN T+ + A + + G+ I
Sbjct: 87 NVLMRGFSVNE-----SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 145 HGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGV 204
HG V G D++ + SN+V+MY +EDA
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDA---------------------------- 173
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
RK+F++MP++ + WN MISGY +N + E++ VF D+
Sbjct: 174 --------------------RKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 265 GDVSP-NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
+ + TL+ +LPA++ L L LG +H A K D + + I +Y+KCG ++
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC 383
+F + K + + ++A+I G +G +L ++++ +G + L+
Sbjct: 274 MGSALFREFR-KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS 332
Query: 384 SHAGLI 389
H LI
Sbjct: 333 GHLMLI 338
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/625 (35%), Positives = 355/625 (56%), Gaps = 58/625 (9%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIGDPLAAAE--ILKFLSVSDRRDLKYARKFFTQMNNPN 80
+ RC +I + KQ+HA FIK L +A + K + YA F +++P
Sbjct: 37 LKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPC 96
Query: 81 CFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQE 140
F +NT+IR + + EAL F+ +M G EP+ FT+P +LKAC ++ I+E
Sbjct: 97 TFDFNTMIRGYVNVMSFE-----EALCFYNEMMQRG-NEPDNFTYPCLLKACTRLKSIRE 150
Query: 141 GKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRM 200
GK+IHG V KLGL+ D FV
Sbjct: 151 GKQIHGQVFKLGLEADVFVQ---------------------------------------- 170
Query: 201 QEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFH 260
N +I+ + R G++ S +F K+ ++ SW+ M+S A G + E + +F
Sbjct: 171 --------NSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR 222
Query: 261 DM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC 319
M ++ +VS L A + GAL LG +H + +N E++ ++ ++++DMY KC
Sbjct: 223 GMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKC 282
Query: 320 GSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGL 379
G ++KA+ +F+K+E K+N +T+SA+I GLA+HG AL + KM + G+ P VVY+ +
Sbjct: 283 GCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSV 341
Query: 380 LSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRP 439
L+ACSH+GL++EGR +F M+K +EP EHYGC+VD + ++PI
Sbjct: 342 LNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEK 401
Query: 440 DDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRL 499
+DVIW+ L C++ N+++G+ A+ L+KL H+ G Y+ +SN+++ W V R
Sbjct: 402 NDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRT 461
Query: 500 KMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQ 559
++ +++ PG S +E+ G H F+ +D SHP+ KEI ML ++ +++ GY P++TQ
Sbjct: 462 EIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQ 521
Query: 560 VLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYK 619
+LLN+DEE+K+ L HS+++AIAFGL+ T P + ++I +NLR+C DCH+ K IS IY+
Sbjct: 522 ILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYE 581
Query: 620 RKIIVRDRKRFHHFEKGVCSCMDYW 644
R+I+VRDR RFH F+ G CSC DYW
Sbjct: 582 REIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 142/343 (41%), Gaps = 64/343 (18%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRD 65
EP T P L R KSI++ KQIH K GL D ++ +
Sbjct: 129 EPDNFTYPC----LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEME 184
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
L A F ++ + SW++++ A A E L F MCSE ++
Sbjct: 185 LSSA--VFEKLESKTAASWSSMVSARAGMGMWS-----ECLLLFRGMCSETNLKAEESGM 237
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVS 185
S L ACA G + G IHGF+++ + + V ++LV MY CG ++ A +F
Sbjct: 238 VSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIF----- 292
Query: 186 HFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISG 245
KM +R+ ++++ MISG
Sbjct: 293 -------------------------------------------QKMEKRNNLTYSAMISG 309
Query: 246 YAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAE---KNEI 302
A +G + A+ +F M + P+++ VSVL A S G ++ G+ V +AE + ++
Sbjct: 310 LALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV--FAEMLKEGKV 367
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAII 345
E ++D+ + G +E+A++ + I +KN + W +
Sbjct: 368 EPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/679 (35%), Positives = 371/679 (54%), Gaps = 77/679 (11%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
KQ+HA+ ++ G + + + + + L ++ + +WNT++ +
Sbjct: 222 KQVHAYGLRKGELNSFIINTLVAMYGKLGK---LASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+ + LEAL + +M EG VEP+ FT SVL AC+ + ++ GKE+H + +K G
Sbjct: 279 QNE-----QLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 153 -LDNDEFVASNLVRMYAMC-----------GVMEDAYLLFSNYVSHFDNN---------- 190
LD + FV S LV MY C G+ + L++ ++ + N
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 191 -----STKLVRNKRMQEGVV----------------------------VLWNVMIDGFVR 217
S L+ N GVV + N ++D + R
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 218 LGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD----------- 266
LG I + ++F KM R +V+WN MI+GY + ++A+ + H MQ +
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 267 VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAI 326
+ PN ITL+++LP+ + L AL GK +H YA KN + D +GSA++DMYAKCG ++ +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 327 QVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
+VF++I +KN ITW+ II MHG +A+D R M GV P +V +I + +ACSH+
Sbjct: 573 KVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHS 631
Query: 387 GLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV-IWK 445
G+++EG +F M G+EP +HY C+VD + MP + W
Sbjct: 632 GMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS 691
Query: 446 ALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMD 505
+LLGA ++H N+++GE A+ L++L P+ + YV L+NI++S G W EVR MKE
Sbjct: 692 SLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQG 751
Query: 506 VRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMD 565
VRK+PGCSWIE +H+F+ D SHP+++++ LE + R+R GY P+ + VL N++
Sbjct: 752 VRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVE 811
Query: 566 EEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVR 625
E++KE L HSE++AIAFG+++T P T +R+ KNLRVC DCH + K IS+I R+II+R
Sbjct: 812 EDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILR 871
Query: 626 DRKRFHHFEKGVCSCMDYW 644
D +RFH F+ G CSC DYW
Sbjct: 872 DVRRFHRFKNGTCSCGDYW 890
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/520 (22%), Positives = 227/520 (43%), Gaps = 80/520 (15%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
+L +A + ++ KQIHAH K G D + A L L D K F +++
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNL-YRKCGDFGAVYKVFDRIS 160
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
N SWN++I + + ++ LEA F M E VEP+ FT SV+ AC+ +
Sbjct: 161 ERNQVSWNSLISSLCSF--EKWEMALEA---FRCMLDEN-VEPSSFTLVSVVTACSNLPM 214
Query: 138 ---IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY----VSHFDNN 190
+ GK++H + ++ G + + F+ + LV MY G + + +L ++ + ++
Sbjct: 215 PEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 191 STKLVRNKRMQEGVVVLWNVMIDG-------------------FVRLG------------ 219
+ L +N+++ E + L ++++G +R G
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 220 -------------------DIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFH 260
+ + R++F+ M R + WN MI+GY+QN KEA+ +F
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 261 DM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC 319
M + + N T+ V+PA R GA + +H + K ++ D + + ++DMY++
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 320 GSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQ-----------QAG 368
G ++ A+++F K+E+ ++ +TW+ +I G DAL KMQ +
Sbjct: 454 GKIDIAMRIFGKMED-RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXX 428
+ P + + +L +C+ + +G+ + + +K + V +VD
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCGCLQMS 571
Query: 429 XXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLM 468
+P + + + W ++ A MHGN + + R +M
Sbjct: 572 RKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 155/346 (44%), Gaps = 59/346 (17%)
Query: 14 THPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFF 73
T + + P R + + + IH +K GL D ++ S + D+ A + F
Sbjct: 406 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI--AMRIF 463
Query: 74 TQMNNPNCFSWNTIIRAFAETDD-DDYKNPLEALGFFGQMCSEGL----VEPNRFTFPSV 128
+M + + +WNT+I + ++ +D L + + S+G ++PN T ++
Sbjct: 464 GKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTI 523
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD 188
L +CA + + +GKEIH + +K L D V S LV MYA CG ++
Sbjct: 524 LPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQ-------------- 569
Query: 189 NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
SRK+F+++PQ++V++WNV+I Y
Sbjct: 570 ----------------------------------MSRKVFDQIPQKNVITWNVIIMAYGM 595
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNE--IEIDD 306
+G +EA+D+ M + V PN +T +SV A S G ++ G + Y K + +E
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI-FYVMKPDYGVEPSS 654
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKIENKKN-AITWSAIIGGLAMH 351
+ V+D+ + G +++A Q+ + N A WS+++G +H
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIH 700
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 52/287 (18%)
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
++P+ + FP++LKA A + ++ GK+IH V K G D
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS-------------------- 132
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV 237
V + N +++ + + GD GA K+F+++ +R+ V
Sbjct: 133 ---------------------------VTVANTLVNLYRKCGDFGAVYKVFDRISERNQV 165
Query: 238 SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLG---ALELGKWVH 294
SWN +IS ++ A++ F M +V P+ TLVSV+ A S L L +GK VH
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225
Query: 295 LYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRA 354
Y + E++ + + ++ MY K G + + +V ++ +TW+ ++ L + +
Sbjct: 226 AYGLRKG-ELNSFIINTLVAMYGKLGKLASS-KVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 355 NDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+AL+Y R+M GV P + +L ACSH ++ G+ L + +K
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
Query: 233 QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKW 292
RS W ++ ++ +EA+ + DM + + P+ ++L A++ L +ELGK
Sbjct: 59 SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118
Query: 293 VHLYAEKNEIEIDDV-LGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMH 351
+H + K +D V + + ++++Y KCG +VF++I +++N ++W+++I L
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI-SERNQVSWNSLISSLCSF 177
Query: 352 GRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIE 390
+ AL+ +R M V P+ + +++ACS+ + E
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/683 (33%), Positives = 367/683 (53%), Gaps = 69/683 (10%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
+L R KS Q KQ+HA FI+T + A+ I + ++ + L A F +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIY---TNLKLLHEALLLFKTLK 66
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
+P +W ++IR F TD + +AL F +M + G P+ FPSVLK+C M
Sbjct: 67 SPPVLAWKSVIRCF--TDQSLFS---KALASFVEMRASGRC-PDHNVFPSVLKSCTMMMD 120
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYA----------------------------- 168
++ G+ +HGF+V+LG+D D + + L+ MYA
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAG 180
Query: 169 --MCGVMEDAYLL----------------------FSNYVSHFDNNSTKLVRNKRMQEGV 204
G+ EDA + FS YV D K + +++G+
Sbjct: 181 YAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV---DVIKGKEIHGYVIRKGI 237
Query: 205 ---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHD 261
V + + ++D + + I S ++F+++ R +SWN +++GY QNG + EA+ +F
Sbjct: 238 DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQ 297
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
M V P + SV+PA + L L LGK +H Y + + + SA++DMY+KCG+
Sbjct: 298 MVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 357
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
++ A ++F+++ N + ++W+AII G A+HG ++A+ + +M++ GV P V ++ +L+
Sbjct: 358 IKAARKIFDRM-NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLT 416
Query: 382 ACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDD 441
ACSH GL++E FN M KV G+ +EHY + D + M + P
Sbjct: 417 ACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTG 476
Query: 442 VIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKM 501
+W LL +C +H N+++ E+VA + + + G+YV + N++AS G W + ++RL+M
Sbjct: 477 SVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRM 536
Query: 502 KEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVL 561
++ +RK P CSWIE+ H F+ D SHP +I L+ + ++ GY + + VL
Sbjct: 537 RKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVL 596
Query: 562 LNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRK 621
++DEE K L HSER+A+AFG+I+T P T +R+ KN+R+C DCH +IK IS+I +R+
Sbjct: 597 HDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITERE 656
Query: 622 IIVRDRKRFHHFEKGVCSCMDYW 644
IIVRD RFHHF +G CSC DYW
Sbjct: 657 IIVRDNSRFHHFNRGNCSCGDYW 679
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/620 (36%), Positives = 347/620 (55%), Gaps = 60/620 (9%)
Query: 31 QLKQIHAHFIKTGLIGDPLAAAEILKFLSVS-DRRDLKYARKFFTQMNNPNCFSWNTIIR 89
L+QIHA ++T LI + L L++S RD+ Y+ + F+Q NP NT+IR
Sbjct: 26 HLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIR 85
Query: 90 AFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVV 149
AF+ + + P E F + + N + LK C K G + G +IHG +
Sbjct: 86 AFSLS-----QTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 150 KLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWN 209
G +D + + L+ +Y+ C DA
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDAC-------------------------------- 168
Query: 210 VMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM---GD 266
K+F+++P+R VSWNV+ S Y +N ++ + +F M+ G
Sbjct: 169 ----------------KVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGC 212
Query: 267 VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAI 326
V P+ +T + L A + LGAL+ GK VH + ++N + L + ++ MY++CGS++KA
Sbjct: 213 VKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAY 272
Query: 327 QVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
QVF + ++N ++W+A+I GLAM+G +A++ + +M + G++P + GLLSACSH+
Sbjct: 273 QVFYGMR-ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHS 331
Query: 387 GLIEEGRSLFNHMVK-VVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWK 445
GL+ EG F+ M I+P + HYGC+VD + +M ++PD IW+
Sbjct: 332 GLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWR 391
Query: 446 ALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMD 505
LLGAC++HG+V++GERV L++L ++G YV L N +++ G W V E+R MKE
Sbjct: 392 TLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKR 451
Query: 506 VRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMD 565
+ PGCS IE+ G +HEF+V+D SHPR +EI ML EI+ +++ AGY IT L N++
Sbjct: 452 IHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLE 511
Query: 566 -EEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIV 624
EE+K AL YHSE++AIAFG++ T P T +R+ KNLR C DCH+ K +S++Y R +IV
Sbjct: 512 SEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIV 571
Query: 625 RDRKRFHHFEKGVCSCMDYW 644
RDR RFHHF+ G CSC D+W
Sbjct: 572 RDRSRFHHFKGGSCSCNDFW 591
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/637 (35%), Positives = 360/637 (56%), Gaps = 34/637 (5%)
Query: 29 IKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTII 88
I+ L+ +H+ I L + ++++ + + +D+ ARK F ++ N N +I
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMR--AYASLKDVASARKVFDEIPERNVIIINVMI 112
Query: 89 RAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFV 148
R++ ++ Y E + FG MC V P+ +TFP VLKAC+ G I G++IHG
Sbjct: 113 RSYV--NNGFYG---EGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166
Query: 149 VKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY----VSHFDNNSTKLVRNKRMQEGV 204
K+GL + FV + LV MY CG + +A L+ V +++ +N+R + +
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 226
Query: 205 VV---LWNVMID-------------GFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
V + +V I ++ + +F KM ++S+VSWNVMI Y +
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVL 308
N EA++++ M+ P+ +++ SVLPA AL LGK +H Y E+ ++ + +L
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 309 GSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
+A+IDMYAKCG +EKA VFE ++++ + ++W+A+I GR DA+ + K+Q +G
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXX 428
+ P + ++ L+ACSHAGL+EEGRS F M I PR+EH CMVD
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 429 XXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASR 488
+ +M + P++ +W ALLGAC++H + +G A L +L P SG YV LSNI+A
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 489 GNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRI 548
G W V +R MK ++K+PG S +E++ +IH FLV D SHP++ EI L+ + ++
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Query: 549 RSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQ-----TPLRIVKNLRV 603
+ GY P+ L +++EE KE+ L HSE++AI F L++T+ + +RI KNLR+
Sbjct: 586 KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRI 645
Query: 604 CEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSC 640
C DCH + KLIS+I R+II+RD RFH F GVCSC
Sbjct: 646 CGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 682
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/637 (35%), Positives = 360/637 (56%), Gaps = 34/637 (5%)
Query: 29 IKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTII 88
I+ L+ +H+ I L + ++++ + + +D+ ARK F ++ N N +I
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMR--AYASLKDVASARKVFDEIPERNVIIINVMI 112
Query: 89 RAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFV 148
R++ ++ Y E + FG MC V P+ +TFP VLKAC+ G I G++IHG
Sbjct: 113 RSY--VNNGFYG---EGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166
Query: 149 VKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY----VSHFDNNSTKLVRNKRMQEGV 204
K+GL + FV + LV MY CG + +A L+ V +++ +N+R + +
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 226
Query: 205 VV---LWNVMID-------------GFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
V + +V I ++ + +F KM ++S+VSWNVMI Y +
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVL 308
N EA++++ M+ P+ +++ SVLPA AL LGK +H Y E+ ++ + +L
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 309 GSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
+A+IDMYAKCG +EKA VFE ++++ + ++W+A+I GR DA+ + K+Q +G
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXX 428
+ P + ++ L+ACSHAGL+EEGRS F M I PR+EH CMVD
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 429 XXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASR 488
+ +M + P++ +W ALLGAC++H + +G A L +L P SG YV LSNI+A
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 489 GNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRI 548
G W V +R MK ++K+PG S +E++ +IH FLV D SHP++ EI L+ + ++
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Query: 549 RSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQ-----TPLRIVKNLRV 603
+ GY P+ L +++EE KE+ L HSE++AI F L++T+ + +RI KNLR+
Sbjct: 586 KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRI 645
Query: 604 CEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSC 640
C DCH + KLIS+I R+II+RD RFH F GVCSC
Sbjct: 646 CGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 682
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/632 (32%), Positives = 365/632 (57%), Gaps = 32/632 (5%)
Query: 19 LFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNN 78
+ +++ ++ + ++H K + DP + + R + YAR F +M++
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGR--INYARNVFDEMSH 174
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
+ +WNT+I + D EA F +M + V P+ +++ AC + G +
Sbjct: 175 RDVVTWNTMIERYCRFGLVD-----EAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNM 228
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
+ + I+ F+++ + D + + LV MYA G M+ A F +
Sbjct: 229 RYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF-----------------R 271
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDV 258
+M + + M+ G+ + G + ++ +F++ ++ +V W MIS Y ++ + +EA+ V
Sbjct: 272 KMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 331
Query: 259 FHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAK 318
F +M + P+ +++ SV+ A + LG L+ KWVH N +E + + +A+I+MYAK
Sbjct: 332 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAK 391
Query: 319 CGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIG 378
CG ++ VFEK+ ++N ++WS++I L+MHG A+DAL + +M+Q V P +V ++G
Sbjct: 392 CGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 379 LLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIR 438
+L CSH+GL+EEG+ +F M I P++EHYGCMVD + +MP+
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 510
Query: 439 PDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVR 498
+ VIW +L+ AC++HG +++G+ A+ +++L P G+ V +SNI+A W V +R
Sbjct: 511 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIR 570
Query: 499 LKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNIT 558
M+E +V K+ G S I+ +G HEFL+ D+ H ++ EI + L+E+ ++++ AGY P+
Sbjct: 571 RVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCG 630
Query: 559 QVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTP------LRIVKNLRVCEDCHSSIK 612
VL++++EE+K+ + +HSE++A+ FGL++ + +RIVKNLRVCEDCH K
Sbjct: 631 SVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFK 690
Query: 613 LISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
L+S++Y+R+IIVRDR RFH ++ G+CSC DYW
Sbjct: 691 LVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 210/447 (46%), Gaps = 37/447 (8%)
Query: 14 THPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFF 73
T +++ +++ CKS+ +KQ+HAH ++T +I L + + S +L YA F
Sbjct: 10 TAANTILEKLSFCKSLNHIKQLHAHILRT-VINHKLNSF-LFNLSVSSSSINLSYALNVF 67
Query: 74 TQMNNP-NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
+ + +P +N +R + + + P + F+ ++ G ++F+F +LKA
Sbjct: 68 SSIPSPPESIVFNPFLRDLSRSSE-----PRATILFYQRIRHVG-GRLDQFSFLPILKAV 121
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNST 192
+K+ + EG E+HG K+ D FV + + MYA CG + A +F +SH D
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDE-MSHRD---- 176
Query: 193 KLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNV----MISGYAQ 248
VV WN MI+ + R G + + KLF +M +V+ + ++S +
Sbjct: 177 ------------VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVL 308
G + ++ + DV + L +++ + G +++ + + K + + +
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMARE---FFRKMSVR-NLFV 280
Query: 309 GSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
+A++ Y+KCG ++ A +F++ E KK+ + W+ +I +AL + +M +G
Sbjct: 281 STAMVSGYSKCGRLDDAQVIFDQTE-KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXX 428
+ P V ++SAC++ G++++ + + + + V G+E + +++
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWV-HSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 429 XXXVLNMPIRPDDVIWKALLGACKMHG 455
MP R + V W +++ A MHG
Sbjct: 399 RDVFEKMP-RRNVVSWSSMINALSMHG 424
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/700 (32%), Positives = 372/700 (53%), Gaps = 71/700 (10%)
Query: 1 MNLICEPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSV 60
M+++ P+ ++ +L I+ ++ LKQIH I L D +LK
Sbjct: 1 MSIVTVPSATSKVQQIKTL---ISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLK--RT 55
Query: 61 SDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPL--EALGFFGQMCSEGLV 118
R KY+ F+ PN F +N++I F N L E L F + GL
Sbjct: 56 LFFRQTKYSYLLFSHTQFPNIFLYNSLINGFV-------NNHLFHETLDLFLSIRKHGLY 108
Query: 119 EPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYL 178
+ FTFP VLKAC + + G ++H VVK G ++D ++L+ +Y+ G + DA+
Sbjct: 109 -LHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHK 167
Query: 179 LFS--------NYVSHFDNNST-------------------------------------- 192
LF + + F +T
Sbjct: 168 LFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGD 227
Query: 193 --------KLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMIS 244
K + MQ+ V +++ + + G + +R +F+ M ++ +V+W+ MI
Sbjct: 228 LDSGEWIVKYMEEMEMQKNSFVR-TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQ 286
Query: 245 GYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI 304
GYA N F KE +++F M ++ P+ ++V L + + LGAL+LG+W +++E
Sbjct: 287 GYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT 346
Query: 305 DDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM 364
+ + +A+IDMYAKCG++ + +VF++++ +K+ + +A I GLA +G + + +
Sbjct: 347 NLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQT 405
Query: 365 QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXX 424
++ G++P ++GLL C HAGLI++G FN + V ++ VEHYGCMVD
Sbjct: 406 EKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGM 465
Query: 425 XXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNI 484
+ +MP+RP+ ++W ALL C++ + ++ E V + L+ L P ++G+YV LSNI
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNI 525
Query: 485 FASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEI 544
++ G W EVR M + ++K PG SWIE++G +HEFL +D+SHP + +I + LE++
Sbjct: 526 YSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDL 585
Query: 545 SNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVC 604
N +R G+ P V +++EE+KE L YHSE++A+A GLIST +R+VKNLRVC
Sbjct: 586 GNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVC 645
Query: 605 EDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
DCH +KLIS+I +R+I+VRD RFH F G CSC DYW
Sbjct: 646 GDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/625 (34%), Positives = 368/625 (58%), Gaps = 40/625 (6%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQ--MNNPNCFSWNTIIRA 90
K++HA +GL P + F + ++ A+K F + ++ + W T++ +
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSS 85
Query: 91 FAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVK 150
F+ Y + ++ F +M VE + + + CAK+ + ++ HG VK
Sbjct: 86 FSR-----YGLLVNSMKLFVEM-RRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVK 139
Query: 151 LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNV 210
+G+ V + L+ MY CG++ + +F + ++E VV W V
Sbjct: 140 MGVLTSVKVCNALMDMYGKCGLVSEVKRIF-----------------EELEEKSVVSWTV 182
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM--QMGDVS 268
++D V+ + R++F++MP+R+ V+W VM++GY GF +E +++ +M + G
Sbjct: 183 VLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH-G 241
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI------DDVL-GSAVIDMYAKCGS 321
N++TL S+L A ++ G L +G+WVH+YA K E+ + DDV+ G+A++DMYAKCG+
Sbjct: 242 LNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGN 301
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
++ ++ VF ++ K+N +TW+A+ GLAMHG+ +D + +M + V P D+ + +LS
Sbjct: 302 IDSSMNVF-RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLS 359
Query: 382 ACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDD 441
ACSH+G+++EG F H ++ G+EP+V+HY CMVD + MP+ P++
Sbjct: 360 ACSHSGIVDEGWRCF-HSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNE 418
Query: 442 VIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKM 501
V+ +LLG+C +HG V++ ER+ R L+++ P ++ + +SN++ + G +R +
Sbjct: 419 VVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSL 478
Query: 502 KEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVL 561
++ +RK PG S I ++ +H F D SHPR KEI L E+ RIRSAGY P+++ ++
Sbjct: 479 RKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLV 538
Query: 562 LNM--DEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYK 619
+ D E+KE AL HSE++A+ FGL+ T+P TPL + KNLR+C DCHS++K++S++Y
Sbjct: 539 SHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYD 598
Query: 620 RKIIVRDRKRFHHFEKGVCSCMDYW 644
R+II+RDR RFH F+ G CSC DYW
Sbjct: 599 REIIIRDRNRFHQFKGGSCSCSDYW 623
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/520 (40%), Positives = 318/520 (61%), Gaps = 25/520 (4%)
Query: 24 ARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFS 83
+C ++++LKQIHA IKTGLI D + A+ +L F S D+ YA FT++N+ N F
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFV 91
Query: 84 WNTIIRAFAETDDDDYKNPLEALGFFGQM-CSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
WNTIIR F+ + P A+ F M CS V+P R T+PSV KA ++G+ ++G+
Sbjct: 92 WNTIIRGFSRS-----SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQE 202
++HG V+K GL++D F+ + ++ MY CG + +A+ +F + FD
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIG-FD-------------- 191
Query: 203 GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM 262
VV WN MI GF + G I ++ LF++MPQR+ VSWN MISG+ +NG FK+A+D+F +M
Sbjct: 192 --VVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM 249
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
Q DV P+ T+VS+L A + LGA E G+W+H Y +N E++ ++ +A+IDMY KCG +
Sbjct: 250 QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCI 309
Query: 323 EKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
E+ + VFE KK W+++I GLA +G A+D + +++++G+ P V +IG+L+A
Sbjct: 310 EEGLNVFE-CAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
Query: 383 CSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV 442
C+H+G + F M + IEP ++HY MV+ + NMP+ D V
Sbjct: 369 CAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTV 428
Query: 443 IWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMK 502
IW +LL AC+ GNV+M +R A+ L KL P ++ YV LSN +AS G + VE RL MK
Sbjct: 429 IWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMK 488
Query: 503 EMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLE 542
E + K+ GCS IE+D +HEF+ +HP++ EI S+L+
Sbjct: 489 ERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLD 528
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 174/430 (40%), Gaps = 100/430 (23%)
Query: 1 MNLICEPTTA--TRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKF- 57
++++C + R T+PS +F R + +Q+H IK GL D +L
Sbjct: 113 IDMLCSSPSVKPQRLTYPS-VFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMY 171
Query: 58 ----------------------------LSVSDRRDLKYARKFFTQMNNPNCFSWNTIIR 89
+ + + A+ F +M N SWN++I
Sbjct: 172 VTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMIS 231
Query: 90 AFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVV 149
F + +K +AL F +M E V+P+ FT S+L ACA +G ++G+ IH ++V
Sbjct: 232 GFVR--NGRFK---DALDMFREM-QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIV 285
Query: 150 KLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWN 209
+ + + V + L+ MY CG +E EG+ V
Sbjct: 286 RNRFELNSIVVTALIDMYCKCGCIE---------------------------EGLNV--- 315
Query: 210 VMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSP 269
F P++ + WN MI G A NGF + AMD+F +++ + P
Sbjct: 316 ------------------FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEP 357
Query: 270 NYITLVSVLPAISRLGALELG-KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQV 328
+ ++ + VL A + G + ++ L EK IE + ++++ G +E+A +
Sbjct: 358 DSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEAL 417
Query: 329 FEKIENKKNAITWSAI------IGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
+ + +++ + WS++ IG + M RA L + G Y+ L +A
Sbjct: 418 IKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCG-------YVLLSNA 470
Query: 383 CSHAGLIEEG 392
+ GL EE
Sbjct: 471 YASYGLFEEA 480
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/632 (34%), Positives = 353/632 (55%), Gaps = 28/632 (4%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
SSL ++ C ++ Q+KQIH H ++ GL ++++ L+ YAR+ +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
N F W +IR +A D EA+ +G M E + P FTF ++LKAC M
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFD-----EAIAMYGCMRKEE-ITPVSFTFSALLKACGTMK 163
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVR 196
+ G++ H +L +V + ++ MY C ++ A +F
Sbjct: 164 DLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFD--------------- 208
Query: 197 NKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAM 256
M E V+ W +I + R+G++ + +LF +P + +V+W M++G+AQN +EA+
Sbjct: 209 --EMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEAL 266
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD--VLGSAVID 314
+ F M+ + + +T+ + A ++LGA + A+K+ D V+GSA+ID
Sbjct: 267 EYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALID 326
Query: 315 MYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM-QQAGVTPTD 373
MY+KCG+VE+A+ VF + N KN T+S++I GLA HGRA +AL + M Q + P
Sbjct: 327 MYSKCGNVEEAVNVFMSM-NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNT 385
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVL 433
V ++G L ACSH+GL+++GR +F+ M + G++P +HY CMVD +
Sbjct: 386 VTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIK 445
Query: 434 NMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVG 493
M + P +W ALLGAC++H N ++ E A L +L P G+Y+ LSN++AS G+W G
Sbjct: 446 TMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGG 505
Query: 494 VVEVRLKMKEMDVRKDPGCSW-IEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAG 552
V+ VR +KE ++K P SW ++ +G +H+F + +HP + +I+ LEE+ R+ G
Sbjct: 506 VLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLG 565
Query: 553 YRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIK 612
Y+P+++ V ++ + K L H+E++A+AF L++T + + I+KNLR+C DCH ++
Sbjct: 566 YQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMR 625
Query: 613 LISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
L SE+ + II+RD RFHHF G CSC D+W
Sbjct: 626 LASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/681 (34%), Positives = 367/681 (53%), Gaps = 69/681 (10%)
Query: 20 FPQIAR-CKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNN 78
FP + + C+++ +IH +K G + D AA ++ S + + AR F +M
Sbjct: 156 FPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYS--RYKAVGNARILFDEMPV 213
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
+ SWN +I + ++ N EAL S GL + T S+L AC + G
Sbjct: 214 RDMGSWNAMISGYCQSG-----NAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDF 263
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF-----------SNYVSHF 187
G IH + +K GL+++ FV++ L+ +YA G + D +F ++ + +
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 188 DNNSTKL--------VRNKRMQEGVVVL---------------------------W---- 208
+ N L +R R+Q + L W
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 209 ----NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
N ++ + +LG + ++R +FN +P V+SWN +ISGYAQNGF EA+++++ M+
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 265 -GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
G+++ N T VSVLPA S+ GAL G +H KN + +D + +++ DMY KCG +E
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLE 503
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC 383
A+ +F +I + N++ W+ +I HG A+ +++M GV P + ++ LLSAC
Sbjct: 504 DALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 384 SHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVI 443
SH+GL++EG+ F M GI P ++HYGCMVD + +M ++PD I
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 444 WKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKE 503
W ALL AC++HGNV +G+ + L ++ P G +V LSN++AS G W GV E+R
Sbjct: 623 WGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHG 682
Query: 504 MDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLN 563
+RK PG S +E+D + F +++HP +E+ L + +++ GY P+ VL +
Sbjct: 683 KGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQD 742
Query: 564 MDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKII 623
+++++KE L HSER+AIAF LI+T +T +RI KNLRVC DCHS K IS+I +R+II
Sbjct: 743 VEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREII 802
Query: 624 VRDRKRFHHFEKGVCSCMDYW 644
VRD RFHHF+ GVCSC DYW
Sbjct: 803 VRDSNRFHHFKNGVCSCGDYW 823
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 218/482 (45%), Gaps = 64/482 (13%)
Query: 26 CKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWN 85
C +++ K +HA + + I + +A+++ ++ AR F + N + ++WN
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLG--NVALARHTFDHIQNRDVYAWN 121
Query: 86 TIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIH 145
+I + + + F M S GL P+ TFPSVLKAC + +G +IH
Sbjct: 122 LMISGYGRAGNS--SEVIRCFSLF--MLSSGLT-PDYRTFPSVLKACRT---VIDGNKIH 173
Query: 146 GFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF------------------------- 180
+K G D +VA++L+ +Y+ + +A +LF
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 181 -----SNYVSHFDN----------------NSTKLVRNKRMQEGV---VVLWNVMIDGFV 216
SN + D+ N + + ++ G+ + + N +ID +
Sbjct: 234 EALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 217 RLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVS 276
G + +K+F++M R ++SWN +I Y N A+ +F +M++ + P+ +TL+S
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 277 VLPAISRLGALELGKWVHLYAEKNEIEIDDV-LGSAVIDMYAKCGSVEKAIQVFEKIENK 335
+ +S+LG + + V + + ++D+ +G+AV+ MYAK G V+ A VF + N
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN- 412
Query: 336 KNAITWSAIIGGLAMHGRANDALDYYRKMQQAG-VTPTDVVYIGLLSACSHAGLIEEGRS 394
+ I+W+ II G A +G A++A++ Y M++ G + ++ +L ACS AG + +G
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 395 LFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMH 454
L ++K G+ V + D +P R + V W L+ H
Sbjct: 473 LHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFH 530
Query: 455 GN 456
G+
Sbjct: 531 GH 532
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 116/233 (49%), Gaps = 15/233 (6%)
Query: 173 MEDAYLLFSNYVSHFDNNS---TKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFN 229
++D + LF Y ++ + +LV +K++Q V + +++ + LG++ +R F+
Sbjct: 54 IDDVHTLF-RYCTNLQSAKCLHARLVVSKQIQN--VCISAKLVNLYCYLGNVALARHTFD 110
Query: 230 KMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD-VSPNYITLVSVLPAISRLGALE 288
+ R V +WN+MISGY + G E + F + ++P+Y T SVL A +
Sbjct: 111 HIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID-- 168
Query: 289 LGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGL 348
G +H A K D + +++I +Y++ +V A +F+++ + +W+A+I G
Sbjct: 169 -GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG-SWNAMISGY 226
Query: 349 AMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
G A +AL ++ V + LLSAC+ AG G ++ ++ +K
Sbjct: 227 CQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 99/240 (41%), Gaps = 34/240 (14%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
S+ P ++ +++Q ++H +K GL D + R L+ A F Q+
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR--LEDALSLFYQIP 513
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
N WNT+I + +A+ F +M EG V+P+ TF ++L AC+ G
Sbjct: 514 RVNSVPWNTLIACHGFHGHGE-----KAVMLFKEMLDEG-VKPDHITFVTLLSACSHSGL 567
Query: 138 IQEGKEIHGFV-VKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVR 196
+ EG+ + G+ +V MY G +E A K ++
Sbjct: 568 VDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA---------------LKFIK 612
Query: 197 NKRMQEGVVVLWNVMID-----GFVRLGDIGASRKLFNKMPQRSVVSWNVMISG-YAQNG 250
+ +Q + W ++ G V LG I AS LF P+ V ++V++S YA G
Sbjct: 613 SMSLQPDASI-WGALLSACRVHGNVDLGKI-ASEHLFEVEPEH--VGYHVLLSNMYASAG 668
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/639 (35%), Positives = 349/639 (54%), Gaps = 63/639 (9%)
Query: 11 TRPTHPSSLFPQIARC-KSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYA 69
T+ S+ + I R +KQL+Q+HAH I TG G + L L+ S R + Y
Sbjct: 3 TKVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTGY-GRSRSLLTKLITLACSARA-IAYT 60
Query: 70 RKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVL 129
F + P+ F +N++I++ ++ + PL + ++ +M S V P+ +TF SV+
Sbjct: 61 HLLFLSVPLPDDFLFNSVIKSTSKL-----RLPLHCVAYYRRMLSSN-VSPSNYTFTSVI 114
Query: 130 KACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDN 189
K+CA + ++ GK +H V G D +V + LV Y+ C
Sbjct: 115 KSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC------------------- 155
Query: 190 NSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQN 249
GD+ +R++F++MP++S+V+WN ++SG+ QN
Sbjct: 156 -----------------------------GDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186
Query: 250 GFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG 309
G EA+ VF+ M+ P+ T VS+L A ++ GA+ LG WVH Y ++++ LG
Sbjct: 187 GLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLG 246
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQ-AG 368
+A+I++Y++CG V KA +VF+K++ + N W+A+I HG A++ + KM+ G
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCG 305
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXX 428
P +V ++ +LSAC+HAGL+EEGRS++ M K + P VEH+ CMVD
Sbjct: 306 PIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEA 365
Query: 429 XXXVLNMPIR---PDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIF 485
+ + +W A+LGACKMH N +G +A+ L+ L P + G +V LSNI+
Sbjct: 366 YKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIY 425
Query: 486 ASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEIS 545
A G V +R M ++RK G S IE++ + F + DESH EI LE +
Sbjct: 426 ALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLI 485
Query: 546 NRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCE 605
+R + GY P +V+ ++EE+KE AL YHSE++A+AFGL+ T + IVKNLR+CE
Sbjct: 486 SRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICE 544
Query: 606 DCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
DCHS+ K IS + R+I VRD+ RFHHF+ G CSC+DYW
Sbjct: 545 DCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 349/618 (56%), Gaps = 61/618 (9%)
Query: 30 KQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIR 89
KQLK+IHA ++TG ++L+ L V D+ YAR+ F +M+ P F WNT+ +
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIG--DMCYARQVFDEMHKPRIFLWNTLFK 82
Query: 90 AFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVV 149
+ + P E+L + +M G V P+ FT+P V+KA +++G G +H VV
Sbjct: 83 GYVRN-----QLPFESLLLYKKMRDLG-VRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 150 KLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWN 209
K G VA+ LV M
Sbjct: 137 KYGFGCLGIVATELVMM------------------------------------------- 153
Query: 210 VMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSP 269
+++ G++ ++ LF M + +V+WN ++ Q G A++ F+ M V
Sbjct: 154 -----YMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208
Query: 270 NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF 329
+ T+VS+L A +LG+LE+G+ ++ A K EI+ + ++ +A +DM+ KCG+ E A +F
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLI 389
E+++ ++N ++WS +I G AM+G + +AL + MQ G+ P V ++G+LSACSHAGL+
Sbjct: 269 EEMK-QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 390 EEGRSLFNHMVKV--VGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKAL 447
EG+ F+ MV+ +EPR EHY CMVD + MP+ PD IW AL
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 448 LGACKMHGNVKMGERVARTLMKLFPHDSGSY-VALSNIFASRGNWVGVVEVRLKMKEMDV 506
LGAC +H ++ +G++VA L++ P D GSY V LSNI+A+ G W V +VR KM+++
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAP-DIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGT 446
Query: 507 RKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDE 566
+K S +E +G IH F D+SHP++K I L+EI +IR GY P+ V +++
Sbjct: 447 KKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEM 506
Query: 567 EKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRD 626
E+KE +L +HSE++AIAFGLI RP P+R++KNLR C+DCH+ K +S + +II+RD
Sbjct: 507 EEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRD 566
Query: 627 RKRFHHFEKGVCSCMDYW 644
+ RFHHF GVCSC ++W
Sbjct: 567 KNRFHHFRNGVCSCKEFW 584
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 184/442 (41%), Positives = 306/442 (69%), Gaps = 2/442 (0%)
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQ 263
++ + N ++ + GD+ ++ K+F+KMP++ +V+WN +I+G+A+NG +EA+ ++ +M
Sbjct: 22 LIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN 81
Query: 264 MGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
+ P+ T+VS+L A +++GAL LGK VH+Y K + + + ++D+YA+CG VE
Sbjct: 82 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVE 141
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQA-GVTPTDVVYIGLLSA 382
+A +F+++ +K N+++W+++I GLA++G +A++ ++ M+ G+ P ++ ++G+L A
Sbjct: 142 EAKTLFDEMVDK-NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 200
Query: 383 CSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV 442
CSH G+++EG F M + IEPR+EH+GCMVD + +MP++P+ V
Sbjct: 201 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 260
Query: 443 IWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMK 502
IW+ LLGAC +HG+ + E +++L P+ SG YV LSN++AS W V ++R +M
Sbjct: 261 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 320
Query: 503 EMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLL 562
V+K PG S +E+ +HEFL+ D+SHP++ I + L+E++ R+RS GY P I+ V +
Sbjct: 321 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 380
Query: 563 NMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKI 622
+++EE+KE+A+ YHSE+IAIAF LIST ++P+ +VKNLRVC DCH +IKL+S++Y R+I
Sbjct: 381 DVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREI 440
Query: 623 IVRDRKRFHHFEKGVCSCMDYW 644
+VRDR RFHHF+ G CSC DYW
Sbjct: 441 VVRDRSRFHHFKNGSCSCQDYW 462
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 56/295 (18%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
D+ A K F +M + +WN++I FAE P EAL + +M S+G ++P+ FT
Sbjct: 38 DVASAYKVFDKMPEKDLVAWNSVINGFAENG-----KPEEALALYTEMNSKG-IKPDGFT 91
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
S+L ACAK+G + GK +H +++K+GL + ++ L+ +YA CG +E+A LF V
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 185 SHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMIS 244
D NS VSW +I
Sbjct: 152 ---DKNS---------------------------------------------VSWTSLIV 163
Query: 245 GYAQNGFFKEAMDVFHDMQMGD-VSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEI 302
G A NGF KEA+++F M+ + + P IT V +L A S G ++ G ++ E+ +I
Sbjct: 164 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 223
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDA 357
E ++D+ A+ G V+KA + + + + N + W ++G +HG ++ A
Sbjct: 224 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/665 (33%), Positives = 352/665 (52%), Gaps = 63/665 (9%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
K+IH +K+G D A + + R + ARK F +M + SWNTI+ ++
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKC--RQVNEARKVFDRMPERDLVSWNTIVAGYS 212
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+ AL MC E L +P+ T SVL A + + I GKEIHG+ ++ G
Sbjct: 213 QNG-----MARMALEMVKSMCEENL-KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSN---------------YVSHFDNNSTKLVRN 197
D+ +++ LV MYA CG +E A LF YV + + L+
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 198 KRMQEGV--------------------------------------VVLWNVMIDGFVRLG 219
K + EGV V + N +I + +
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK 386
Query: 220 DIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
++ + +F K+ R++VSWN MI G+AQNG +A++ F M+ V P+ T VSV+
Sbjct: 387 EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAI 339
AI+ L KW+H ++ ++ + + +A++DMYAKCG++ A +F+ + ++++
Sbjct: 447 AIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM-SERHVT 505
Query: 340 TWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
TW+A+I G HG AL+ + +MQ+ + P V ++ ++SACSH+GL+E G F M
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMM 565
Query: 400 VKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKM 459
+ IE ++HYG MVD ++ MP++P ++ A+LGAC++H NV
Sbjct: 566 KENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNF 625
Query: 460 GERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDG 519
E+ A L +L P D G +V L+NI+ + W V +VR+ M +RK PGCS +EI
Sbjct: 626 AEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKN 685
Query: 520 VIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSER 579
+H F +HP +K+I + LE++ I+ AGY P+ T ++L ++ + KE L HSE+
Sbjct: 686 EVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPD-TNLVLGVENDVKEQLLSTHSEK 744
Query: 580 IAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCS 639
+AI+FGL++T T + + KNLRVC DCH++ K IS + R+I+VRD +RFHHF+ G CS
Sbjct: 745 LAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACS 804
Query: 640 CMDYW 644
C DYW
Sbjct: 805 CGDYW 809
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 204/396 (51%), Gaps = 62/396 (15%)
Query: 15 HPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFT 74
HP++L + RC S+K+L+QI K GL + +++ D A + F
Sbjct: 38 HPAALL--LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVD--EAARVFE 93
Query: 75 QMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAK 134
+++ ++T+++ FA+ D D +AL FF +M + VEP + F +LK C
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLD-----KALQFFVRMRYDD-VEPVVYNFTYLLKVCGD 147
Query: 135 MGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKL 194
++ GKEIHG +VK G D F + L MYA C + +A
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA------------------ 189
Query: 195 VRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKE 254
RK+F++MP+R +VSWN +++GY+QNG +
Sbjct: 190 ------------------------------RKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
A+++ M ++ P++IT+VSVLPA+S L + +GK +H YA ++ + + +A++D
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 315 MYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
MYAKCGS+E A Q+F+ + ++N ++W+++I + +A+ ++KM GV PTDV
Sbjct: 280 MYAKCGSLETARQLFDGML-ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKV-VGIEPRV 409
+G L AC+ G +E GR F H + V +G++ V
Sbjct: 339 SVMGALHACADLGDLERGR--FIHKLSVELGLDRNV 372
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 180/408 (44%), Gaps = 62/408 (15%)
Query: 4 ICEPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDR 63
+CE S+ P ++ + I K+IH + +++G D L +
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF--DSLVNISTALVDMYAKC 284
Query: 64 RDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRF 123
L+ AR+ F M N SWN++I A+ + + NP EA+ F +M EG V+P
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNE-----NPKEAMLIFQKMLDEG-VKPTDV 338
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS-- 181
+ L ACA +G ++ G+ IH V+LGLD + V ++L+ MY C ++ A +F
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 182 -------------------------NYVSHFDNNSTK-----------------LVRNKR 199
NY S + + K + + +
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 200 MQEGVVV---------LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNG 250
GVV+ + ++D + + G I +R +F+ M +R V +WN MI GY +G
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 251 FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIEIDDVLG 309
F K A+++F +MQ G + PN +T +SV+ A S G +E G K ++ E IE+
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 578
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDA 357
A++D+ + G + +A ++ K + A++G +H N A
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA 626
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/664 (34%), Positives = 357/664 (53%), Gaps = 63/664 (9%)
Query: 34 QIHAHFIKTGLIGD-PLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
Q+H +K GL P++ + I +L + R AR F + + +WN++I +A
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK---ARILFDKTEVKSVVTWNSMISGYA 271
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
D LEALG F M V + +F SV+K CA + ++ +++H VVK G
Sbjct: 272 ANGLD-----LEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLF------SNYVSH-------------------F 187
D+ + + L+ Y+ C M DA LF N VS F
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLF 385
Query: 188 DNNSTKLVRNKRMQEGVVV-------------------------LWNVMIDGFVRLGDIG 222
K VR V++ + ++D +V+LG +
Sbjct: 386 SEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 223 ASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAIS 282
+ K+F+ + + +V+W+ M++GYAQ G + A+ +F ++ G + PN T S+L +
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 283 RLGA-LELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITW 341
A + GK H +A K+ ++ + SA++ MYAK G++E A +VF++ + +K+ ++W
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR-QREKDLVSW 564
Query: 342 SAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+++I G A HG+A ALD +++M++ V V +IG+ +AC+HAGL+EEG F+ MV+
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 624
Query: 402 VVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGE 461
I P EH CMVD + NMP IW+ +L AC++H ++G
Sbjct: 625 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGR 684
Query: 462 RVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVI 521
A ++ + P DS +YV LSN++A G+W +VR M E +V+K+PG SWIE+
Sbjct: 685 LAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKT 744
Query: 522 HEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIA 581
+ FL D SHP +I LE++S R++ GY P+ + VL ++D+E KE+ L HSER+A
Sbjct: 745 YSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLA 804
Query: 582 IAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEK-GVCSC 640
IAFGLI+T +PL I+KNLRVC DCH IKLI++I +R+I+VRD RFHHF GVCSC
Sbjct: 805 IAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 864
Query: 641 MDYW 644
D+W
Sbjct: 865 GDFW 868
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 161/351 (45%), Gaps = 58/351 (16%)
Query: 33 KQIHAHFIKTGLIGD-PLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAF 91
+Q+H IK G + D + + + ++ S+ +D RK F +M N +W T+I +
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD---GRKVFDEMKERNVVTWTTLISGY 169
Query: 92 AETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
A +D E L F +M +EG +PN FTF + L A+ G G ++H VVK
Sbjct: 170 ARNSMND-----EVLTLFMRMQNEG-TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 152 GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVM 211
GLD V+++L+ +Y CG + A +L FD K VV WN
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARIL-------FDKTEVK----------SVVTWN-- 264
Query: 212 IDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNY 271
MISGYA NG EA+ +F+ M++ V +
Sbjct: 265 -----------------------------SMISGYAANGLDLEALGMFYSMRLNYVRLSE 295
Query: 272 ITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK 331
+ SV+ + L L + +H K D + +A++ Y+KC ++ A+++F++
Sbjct: 296 SSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKE 355
Query: 332 IENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
I N ++W+A+I G + +A+D + +M++ GV P + Y +L+A
Sbjct: 356 IGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 137/266 (51%), Gaps = 16/266 (6%)
Query: 121 NRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYA-MCGVMEDAYLL 179
+R ++ S+L ++ GR QE K + + +LG++ D + S+++++ A +C + L
Sbjct: 57 DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLH 116
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSW 239
F ++ V + ++D +++ + RK+F++M +R+VV+W
Sbjct: 117 CQCIKFGFLDD--------------VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 240 NVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEK 299
+ISGYA+N E + +F MQ PN T + L ++ G G VH K
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 300 NEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALD 359
N ++ + +++I++Y KCG+V KA +F+K E K+ +TW+++I G A +G +AL
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE-VKSVVTWNSMISGYAANGLDLEALG 281
Query: 360 YYRKMQQAGVTPTDVVYIGLLSACSH 385
+ M+ V ++ + ++ C++
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 8/190 (4%)
Query: 218 LGDIGASR-----KLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
G + +SR LF+K P R S+ ++ G++++G +EA +F ++ + +
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
SVL + L G+ +H K D +G++++D Y K + + +VF+++
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
+ ++N +TW+ +I G A + ++ L + +MQ G P + L + G+ G
Sbjct: 155 K-ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV--GG 211
Query: 393 RSLFNHMVKV 402
R L H V V
Sbjct: 212 RGLQVHTVVV 221
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/635 (35%), Positives = 345/635 (54%), Gaps = 69/635 (10%)
Query: 72 FFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKA 131
F ++ + FSWN++I A + D EAL F M L P R +FP +KA
Sbjct: 32 FNRYVDKTDVFSWNSVIADLARSGD-----SAEALLAFSSMRKLSLY-PTRSSFPCAIKA 85
Query: 132 CAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLV--------------------------- 164
C+ + I GK+ H G +D FV+S L+
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 165 ----RMYAMCGVMEDAYLLFSNYVSHFDNNSTKL----------------VRNKRMQEGV 204
R Y + G DA LF + + +++ + V K + E +
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 205 ------------VVLWNVMIDGFVRLGD--IGASRKLFNKMPQRSVVSWNVMISGYAQNG 250
V + N ++D + + G+ + +RK+F+++ + VS+N ++S YAQ+G
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 251 FFKEAMDVFHDMQMGDV-SPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG 309
EA +VF + V + N ITL +VL A+S GAL +GK +H + +E D ++G
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG 325
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV 369
+++IDMY KCG VE A + F++++NK N +W+A+I G MHG A AL+ + M +GV
Sbjct: 326 TSIIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Query: 370 TPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXX 429
P + ++ +L+ACSHAGL EG FN M G+EP +EHYGCMVD
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 430 XXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRG 489
+ M ++PD +IW +LL AC++H NV++ E L +L + G Y+ LS+I+A G
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 490 NWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR 549
W V VR+ MK + K PG S +E++G +H FL+ DE HP+ ++I L E++ ++
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564
Query: 550 SAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHS 609
AGY N + V ++DEE+KE L HSE++AIAFG+++T P + + +VKNLRVC DCH+
Sbjct: 565 EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHN 624
Query: 610 SIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
IKLIS+I R+ +VRD KRFHHF+ G CSC DYW
Sbjct: 625 VIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 144/336 (42%), Gaps = 56/336 (16%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
S+ +R + + IH+ IK G +L + + ARK F Q+
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
+ + S+N+I+ +A++ + EA F ++ +V N T +VL A + G
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSN-----EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGA 302
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
++ GK IH V+++GL++D V ++++ MY CG +E A F
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFD---------------- 346
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
RM+ V W M I+GY +G +A++
Sbjct: 347 -RMKNKNVRSWTAM-------------------------------IAGYGMHGHAAKALE 374
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG--SAVIDM 315
+F M V PNYIT VSVL A S G L + W A K ++ L ++D+
Sbjct: 375 LFPAMIDSGVRPNYITFVSVLAACSHAG-LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDL 433
Query: 316 YAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMH 351
+ G ++KA + ++++ K ++I WS+++ +H
Sbjct: 434 LGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 227 LFNKMPQRS-VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLG 285
LFN+ ++ V SWN +I+ A++G EA+ F M+ + P + + A S L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 286 ALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAII 345
+ GK H A + D + SA+I MY+ CG +E A +VF++I K+N ++W+++I
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP-KRNIVSWTSMI 149
Query: 346 GGLAMHGRANDALDYYRKMQQAGVTPTDVVY------IGLLSACSHA---GLIEEGRSL 395
G ++G A DA+ ++ + D ++ + ++SACS GL E S
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/621 (34%), Positives = 351/621 (56%), Gaps = 61/621 (9%)
Query: 27 KSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNT 86
++++ +++HAH IKT + +L F D L+ ARK +M N SW
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD--CLEDARKVLDEMPEKNVVSWTA 123
Query: 87 IIRAFAETDDDDYKNPLEALGFFGQMC-SEGLVEPNRFTFPSVLKACAKMGRIQEGKEIH 145
+I +++T EAL F +M S+G +PN FTF +VL +C + + GK+IH
Sbjct: 124 MISRYSQTGHSS-----EALTVFAEMMRSDG--KPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 146 GFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVV 205
G +VK NY SH +
Sbjct: 177 GLIVKW------------------------------NYDSH------------------I 188
Query: 206 VLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMG 265
+ + ++D + + G I +R++F +P+R VVS +I+GYAQ G +EA+++FH +
Sbjct: 189 FVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE 248
Query: 266 DVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKA 325
+SPNY+T S+L A+S L L+ GK H + + E+ VL +++IDMY+KCG++ A
Sbjct: 249 GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYA 308
Query: 326 IQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQ-QAGVTPTDVVYIGLLSACS 384
++F+ + ++ AI+W+A++ G + HG + L+ +R M+ + V P V + +LS CS
Sbjct: 309 RRLFDNMP-ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Query: 385 HAGLIEEGRSLFNHMVK-VVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVI 443
H + + G ++F+ MV G +P EHYGC+VD + MP +P +
Sbjct: 368 HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGV 427
Query: 444 WKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKE 503
+LLGAC++H +V +GE V R L+++ P ++G+YV LSN++AS G W V VR M +
Sbjct: 428 LGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQ 487
Query: 504 MDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLN 563
V K+PG SWI+ + +H F D +HPR +E+ + ++EIS +++ AGY P+++ VL +
Sbjct: 488 KAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYD 547
Query: 564 MDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKII 623
+DEE+KE L HSE++A+ FGLI+T P+R+ KNLR+C DCH+ K+ S++++R++
Sbjct: 548 VDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVS 607
Query: 624 VRDRKRFHHFEKGVCSCMDYW 644
+RD+ RFH G+CSC DYW
Sbjct: 608 LRDKNRFHQIVDGICSCGDYW 628
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/576 (37%), Positives = 323/576 (56%), Gaps = 32/576 (5%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
AR+FF MN + SWNTII +A++ D EA F + + + FT+ ++
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKID-----EARQLFDESPVQDV-----FTWTAM 287
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD 188
+ + ++E +E+ + + +E + ++ Y ME A LF
Sbjct: 288 VSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELF-------- 335
Query: 189 NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
RN V WN MI G+ + G I ++ LF+KMP+R VSW MI+GY+Q
Sbjct: 336 --DVMPCRN-------VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQ 386
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVL 308
+G EA+ +F M+ N + S L + + ALELGK +H K E +
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFV 446
Query: 309 GSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
G+A++ MY KCGS+E+A +F+++ K+ ++W+ +I G + HG AL ++ M++ G
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAG-KDIVSWNTMIAGYSRHGFGEVALRFFESMKREG 505
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXX 428
+ P D + +LSACSH GL+++GR F M + G+ P +HY CMVD
Sbjct: 506 LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA 565
Query: 429 XXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASR 488
+ NMP PD IW LLGA ++HGN ++ E A + + P +SG YV LSN++AS
Sbjct: 566 HNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASS 625
Query: 489 GNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRI 548
G W V ++R++M++ V+K PG SWIEI H F V DE HP EI + LEE+ R+
Sbjct: 626 GRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRM 685
Query: 549 RSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCH 608
+ AGY + VL +++EE+KE + YHSER+A+A+G++ P+R++KNLRVCEDCH
Sbjct: 686 KKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCH 745
Query: 609 SSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
++IK ++ I R II+RD RFHHF+ G CSC DYW
Sbjct: 746 NAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 160/364 (43%), Gaps = 63/364 (17%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
+ + ARK F +M + SWN +I+ + +N +A F E + E + +
Sbjct: 110 EFELARKLFDEMPERDLVSWNVMIKGYVRN-----RNLGKARELF-----EIMPERDVCS 159
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASN-LVRMYAMCGVMEDAYLLFSNY 183
+ ++L A+ G + + + + ++ ND V+ N L+ Y ME+A +LF
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFD---RMPEKND--VSWNALLSAYVQNSKMEEACMLF--- 211
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMI 243
K + +V WN ++ GFV+ I +R+ F+ M R VVSWN +I
Sbjct: 212 --------------KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTII 257
Query: 244 SGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIE 303
+GYAQ+G EA +F + + DV + V I E + E+NE+
Sbjct: 258 TGYAQSGKIDEARQLFDESPVQDV---FTWTAMVSGYIQNRMVEEARELFDKMPERNEVS 314
Query: 304 IDDVLGSAV--------------------------IDMYAKCGSVEKAIQVFEKIENKKN 337
+ +L V I YA+CG + +A +F+K+ K++
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRD 373
Query: 338 AITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFN 397
++W+A+I G + G + +AL + +M++ G + LS C+ +E G+ L
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 398 HMVK 401
+VK
Sbjct: 434 RLVK 437
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
KRM V +N MI G++R G+ +RKLF++MP+R +VSWNVMI GY +N +A +
Sbjct: 88 KRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARE 147
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWV-HLYAEKNEIEIDDVLGSAVIDMY 316
+F M DV + ++L ++ G ++ + V EKN DV +A++ Y
Sbjct: 148 LFEIMPERDV----CSWNTMLSGYAQNGCVDDARSVFDRMPEKN-----DVSWNALLSAY 198
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
+ +E+A +F+ EN ++W+ ++GG + +A ++ M V + +
Sbjct: 199 VQNSKMEEACMLFKSRENWA-LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTII 257
Query: 377 IGLLSACSHAGLIEEGRSLFNH 398
G + +G I+E R LF+
Sbjct: 258 TGY----AQSGKIDEARQLFDE 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 236 VVSWNVMISGYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGALELGKWVH 294
+ WNV IS Y + G EA+ VF M + VS N ++ R G EL +
Sbjct: 64 IKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYN-----GMISGYLRNGEFELAR--K 116
Query: 295 LYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRA 354
L+ E E ++ V + +I Y + ++ KA ++FE I +++ +W+ ++ G A +G
Sbjct: 117 LFDEMPERDL--VSWNVMIKGYVRNRNLGKARELFE-IMPERDVCSWNTMLSGYAQNGCV 173
Query: 355 NDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLF 396
+DA + +M + DV + LLSA +EE LF
Sbjct: 174 DDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACMLF 211
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/621 (34%), Positives = 340/621 (54%), Gaps = 56/621 (9%)
Query: 26 CKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN-NPNCFSW 84
C S+K+L++IH+H I GL P +L+F +VS L +A+ F + +P+ W
Sbjct: 15 CNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDW 74
Query: 85 NTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEI 144
N +IR F+ + +PL ++ F+ +M + P+ FTF LK+C ++ I + EI
Sbjct: 75 NYLIRGFSNS-----SSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEI 129
Query: 145 HGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGV 204
HG V++ G +D VA++LVR Y+ +N
Sbjct: 130 HGSVIRSGFLDDAIVATSLVRCYS------------AN---------------------- 155
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
G + + K+F++MP R +VSWNVMI ++ G +A+ ++ M
Sbjct: 156 --------------GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN 201
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEK 324
V + TLV++L + + + AL +G +H A E + +A+IDMYAKCGS+E
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS 384
AI VF + K++ +TW+++I G +HG +A+ ++RKM +GV P + ++GLL CS
Sbjct: 262 AIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 385 HAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIW 444
H GL++EG F M + P V+HYGCMVD + D V+W
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 445 KALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEM 504
+ LLG+CK+H N+++GE + L++L ++G YV +++I+++ + +R ++
Sbjct: 381 RTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSH 440
Query: 505 DVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRP-NITQVLLN 563
D++ PG SWIEI +H+F+V+D+ HP + I S L E+ NR AGY+P + +
Sbjct: 441 DLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPT 500
Query: 564 MDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKII 623
+ + SA HSE++AIA+GL+ T T LRI KNLRVC DCHS K +S+ + R+II
Sbjct: 501 LSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREII 560
Query: 624 VRDRKRFHHFEKGVCSCMDYW 644
VRDR RFHHF G+CSC DYW
Sbjct: 561 VRDRVRFHHFADGICSCNDYW 581
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 141/328 (42%), Gaps = 57/328 (17%)
Query: 25 RCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSW 84
R KSI + +IH I++G + D + A +++ S + ++ A K F +M + SW
Sbjct: 119 RIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANG--SVEIASKVFDEMPVRDLVSW 176
Query: 85 NTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEI 144
N +I F+ + +AL + +M +EG V + +T ++L +CA + + G +
Sbjct: 177 NVMICCFSHVGLHN-----QALSMYKRMGNEG-VCGDSYTLVALLSSCAHVSALNMGVML 230
Query: 145 HGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGV 204
H + ++ FV++ L+ MYA CG +E+A +F+ M++
Sbjct: 231 HRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNG-----------------MRKRD 273
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
V+ WN MI GY +G EA+ F M
Sbjct: 274 VLTWN-------------------------------SMIIGYGVHGHGVEAISFFRKMVA 302
Query: 265 GDVSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
V PN IT + +L S G ++ G + + + + + + ++D+Y + G +E
Sbjct: 303 SGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 362
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMH 351
++++ ++ + W ++G +H
Sbjct: 363 NSLEMIYASSCHEDPVLWRTLLGSCKIH 390
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/570 (36%), Positives = 327/570 (57%), Gaps = 30/570 (5%)
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
N SWN I+ F + EA+ F ++ G P++ T SVL + +
Sbjct: 216 NIVSWNGILSGFNRSGYHK-----EAVVMFQKIHHLGFC-PDQVTVSSVLPSVGDSEMLN 269
Query: 140 EGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKR 199
G+ IHG+V+K GL D+ V S ++ MY G + LF+ + +
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF--------------EM 315
Query: 200 MQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS----VVSWNVMISGYAQNGFFKEA 255
M+ GV N I G R G + + ++F +++ VVSW +I+G AQNG EA
Sbjct: 316 MEAGVC---NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEA 372
Query: 256 MDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV-LGSAVID 314
+++F +MQ+ V PN++T+ S+LPA + AL G+ H +A + + +D+V +GSA+ID
Sbjct: 373 LELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL-LDNVHVGSALID 431
Query: 315 MYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
MYAKCG + + VF + K N + W++++ G +MHG+A + + + + + + P +
Sbjct: 432 MYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLN 434
+ LLSAC GL +EG F M + GI+PR+EHY CMV+ +
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 435 MPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGV 494
MP PD +W ALL +C++ NV + E A L L P + G+YV LSNI+A++G W V
Sbjct: 551 MPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEV 610
Query: 495 VEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYR 554
+R KM+ + ++K+PGCSWI++ ++ L D+SHP+ +I ++EIS +R +G+R
Sbjct: 611 DSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHR 670
Query: 555 PNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLI 614
PN+ L +++E+++E L HSE++A+ FGL++T TPL+++KNLR+C DCH+ IK I
Sbjct: 671 PNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFI 730
Query: 615 SEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
S R+I +RD RFHHF+ G+CSC D+W
Sbjct: 731 SSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 218/474 (45%), Gaps = 65/474 (13%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
Q HA +K+G D +A+++ S S+ A + +P +S++++I A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIA--SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 94 TDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGL 153
K +++G F +M S GL+ P+ P++ K CA++ + GK+IH GL
Sbjct: 94 A-----KLFTQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGL 147
Query: 154 DNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMID 213
D D FV ++ MY CG M DA +F RM + VV + ++
Sbjct: 148 DMDAFVQGSMFHMYMRCGRMGDARKVFD-----------------RMSDKDVVTCSALLC 190
Query: 214 GFVRLGDIGASRKLFNKMP----QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSP 269
+ R G + ++ ++M + ++VSWN ++SG+ ++G+ KEA+ +F + P
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 270 NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS-------- 321
+ +T+ SVLP++ L +G+ +H Y K + D + SA+IDMY K G
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 322 -----------------------VEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRAN 355
V+KA+++FE + + N ++W++II G A +G+
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 356 DALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCM 415
+AL+ +R+MQ AGV P V +L AC + + GRS V+V ++ H G
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSA 428
Query: 416 VDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMK 469
+ V NM + V W +L+ MHG K + +LM+
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 150/363 (41%), Gaps = 88/363 (24%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDR------------- 63
SS+ P + + + + IH + IK GL+ D + ++ S
Sbjct: 256 SSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM 315
Query: 64 --------------------RDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPL 103
+ L+ F Q N SW +II A+ D +
Sbjct: 316 MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD-----I 370
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
EAL F +M G V+PN T PS+L AC + + G+ HGF V++ L ++ V S L
Sbjct: 371 EALELFREMQVAG-VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSAL 429
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGA 223
+ MYA CG + + ++F N+M
Sbjct: 430 IDMYAKCGRINLSQIVF----------------------------NMM------------ 449
Query: 224 SRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISR 283
P +++V WN +++G++ +G KE M +F + + P++I+ S+L A +
Sbjct: 450 --------PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 284 LGALELG-KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWS 342
+G + G K+ + +E+ I+ S ++++ + G +++A + +++ + ++ W
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWG 561
Query: 343 AII 345
A++
Sbjct: 562 ALL 564
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/697 (31%), Positives = 362/697 (51%), Gaps = 63/697 (9%)
Query: 4 ICEPTTATRPTHPS--SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVS 61
+C ++ T P H + +L P + Q+HA +K G +P + S
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 62 DRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPN 121
+ R L A F ++ + ++NT+I + + D Y E++ F +M G +P+
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEK--DGLYT---ESIHLFLKMRQSGH-QPS 249
Query: 122 RFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS 181
FTF VLKA + G+++H V G D V + ++ Y+ + + +LF
Sbjct: 250 DFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD 309
Query: 182 -----NYVSH---------------------------FDN---------------NSTKL 194
++VS+ FD +S ++
Sbjct: 310 EMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM 369
Query: 195 VRNKRMQ------EGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
R Q + ++ + N ++D + + + +F +PQR+ VSW +ISGY Q
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ 429
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVL 308
G + +F M+ ++ + T +VL A + +L LGK +H + ++ +
Sbjct: 430 KGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 309 GSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
GS ++DMYAKCGS++ A+QVFE++ ++ NA++W+A+I A +G A+ + KM ++G
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGAFAKMIESG 548
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXX 428
+ P V +G+L+ACSH G +E+G F M + GI P+ +HY CM+D
Sbjct: 549 LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEA 608
Query: 429 XXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFP-HDSGSYVALSNIFAS 487
+ MP PD+++W ++L AC++H N + ER A L + D+ +YV++SNI+A+
Sbjct: 609 EKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAA 668
Query: 488 RGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNR 547
G W V +V+ M+E ++K P SW+E++ IH F D++HP EI + E++
Sbjct: 669 AGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAE 728
Query: 548 IRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDC 607
I GY+P+ + V+ ++DE+ K +L YHSER+A+AF LIST P+ ++KNLR C DC
Sbjct: 729 IEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDC 788
Query: 608 HSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
H++IKLIS+I KR+I VRD RFHHF +GVCSC DYW
Sbjct: 789 HAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 98/182 (53%), Gaps = 5/182 (2%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
V N MI G V+ GD+ ++R LF+ MP R+VV+W +++ YA+N F EA +F M
Sbjct: 79 TVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCR 138
Query: 265 GD--VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVL--GSAVIDMYAKCG 320
P+++T ++LP + VH +A K + + L + ++ Y +
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVR 198
Query: 321 SVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLL 380
++ A +FE+I +K+++T++ +I G G +++ + KM+Q+G P+D + G+L
Sbjct: 199 RLDLACVLFEEIP-EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 381 SA 382
A
Sbjct: 258 KA 259
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/632 (33%), Positives = 351/632 (55%), Gaps = 58/632 (9%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
SS+F A +++ KQ+H+ I++GL+ D + + + + S + RK F +M
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLV-DDVECSLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
+ + SW +I + + + EA+ F +M ++G VEPN FTF S KAC +
Sbjct: 332 EDHSVMSWTALITGYMK----NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS 387
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVR 196
+ GK++ G K GL ++ VA++++ M+ V+
Sbjct: 388 DPRVGKQVLGQAFKRGLASNSSVANSVISMF---------------------------VK 420
Query: 197 NKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAM 256
+ RM++ +++ F + ++++VS+N + G +N F++A
Sbjct: 421 SDRMED---------------------AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
+ ++ ++ + T S+L ++ +G++ G+ +H K + + + +A+I MY
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
+KCGS++ A +VF +EN+ N I+W+++I G A HG A L+ + +M + GV P +V Y
Sbjct: 520 SKCGSIDTASRVFNFMENR-NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 578
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
+ +LSACSH GL+ EG FN M + I+P++EHY CMVD + MP
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638
Query: 437 IRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVE 496
+ D ++W+ LGAC++H N ++G+ AR +++L P++ +Y+ LSNI+A G W E
Sbjct: 639 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 698
Query: 497 VRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPN 556
+R KMKE ++ K+ GCSWIE+ IH+F V D +HP A +I L+ + I+ GY P+
Sbjct: 699 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPD 758
Query: 557 ITQVLLNMDEEKKESA----LHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIK 612
VL ++EE E+ L+ HSE+IA+AFGLIST P+R+ KNLRVC DCH+++K
Sbjct: 759 TDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMK 818
Query: 613 LISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
IS + R+I++RD RFHHF+ G CSC DYW
Sbjct: 819 YISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 169/395 (42%), Gaps = 69/395 (17%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
SSL R + + K +HA I+ + D + ++ S S D A F M
Sbjct: 66 SSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG--DSAKAEDVFETM 123
Query: 77 ---NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACA 133
+ SW+ ++ + + L+A+ F + GLV PN + + +V++AC+
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRE-----LDAIKVFVEFLELGLV-PNDYCYTAVIRACS 177
Query: 134 KMGRIQEGKEIHGFVVKLG-LDNDEFVASNLVRMYAMC-GVMEDAYLLFSNYVSHFDNNS 191
+ G+ GF++K G ++D V +L+ M+ E+AY +F
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD---------- 227
Query: 192 TKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
+M E VV W +MI+ Q GF
Sbjct: 228 -------KMSELNVVTW-------------------------------TLMITRCMQMGF 249
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
+EA+ F DM + + TL SV A + L L LGK +H +A ++ + +DDV S
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL-VDDVECS- 307
Query: 312 VIDMYAKC---GSVEKAIQVFEKIENKKNAITWSAIIGGLAMH-GRANDALDYYRKM-QQ 366
++DMYAKC GSV+ +VF+++E+ + ++W+A+I G + A +A++ + +M Q
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDRMED-HSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 367 AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
V P + AC + G+ + K
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 5/210 (2%)
Query: 250 GFFKEAMDVFHDMQMGDVSP-NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVL 308
G + A+ M + P + +T S+L + R LGK VH + +IE D VL
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 309 GSAVIDMYAKCGSVEKAIQVFEKIE--NKKNAITWSAIIGGLAMHGRANDALDYYRKMQQ 366
+++I +Y+K G KA VFE + K++ ++WSA++ +GR DA+ + + +
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 367 AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGC-MVDXXXXXXXX 425
G+ P D Y ++ ACS++ + GR ++K E V GC ++D
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLIDMFVKGENS 218
Query: 426 XXXXXXVLNMPIRPDDVIWKALLGACKMHG 455
V + + V W ++ C G
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMG 248
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/625 (35%), Positives = 346/625 (55%), Gaps = 30/625 (4%)
Query: 24 ARCKSIKQLKQIHAHFIKTGLIGD-PLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCF 82
AR +++ K +HAH +K G++ PLA + + +A + F +M + +
Sbjct: 14 ARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAA---SHALQVFDEMPHRDHI 70
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
+W +++ A + + + L F + S + P+ F F +++KACA +G I G+
Sbjct: 71 AWASVLTALNQANLSG-----KTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQE 202
++H + NDE V S+LV MYA CG++ A +F + +R K
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDS------------IRVKN--- 170
Query: 203 GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM 262
+ W M+ G+ + G + +LF +P +++ SW +ISG+ Q+G EA VF +M
Sbjct: 171 --TISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM 228
Query: 263 QMGDVS-PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
+ V + + L S++ A + L A G+ VH + + +A+IDMYAKC
Sbjct: 229 RRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSD 288
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
V A +F ++ ++ + ++W+++I G+A HG+A AL Y M GV P +V ++GL+
Sbjct: 289 VIAAKDIFSRMRHR-DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIY 347
Query: 382 ACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDD 441
ACSH G +E+GR LF M K GI P ++HY C++D + MP PD+
Sbjct: 348 ACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDE 407
Query: 442 VIWKALLGACKMHGNVKMGERVARTLMKLFP-HDSGSYVALSNIFASRGNWVGVVEVRLK 500
W ALL ACK G +MG R+A L+ F D +Y+ LSNI+AS W V E R K
Sbjct: 408 PTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRK 467
Query: 501 MKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR-SAGYRPNITQ 559
+ EM+VRKDPG S +E+ F + SHP ++I +L+++ +R GY P+ +
Sbjct: 468 LGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSW 527
Query: 560 VLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYK 619
+L +MDE++KE L +HSER A+A+GL+ P TP+RIVKNLRVC DCH +K ISEI +
Sbjct: 528 ILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITE 587
Query: 620 RKIIVRDRKRFHHFEKGVCSCMDYW 644
R+IIVRD R+HHF+ G CSC D+W
Sbjct: 588 REIIVRDATRYHHFKGGKCSCNDFW 612
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/612 (33%), Positives = 336/612 (54%), Gaps = 58/612 (9%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
KQ+H H IK + D + ++ + S R +K A F + +N + +WN ++ +
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALID--AYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYT 493
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
++ D + L F M +G + FT +V K C + I +GK++H + +K G
Sbjct: 494 QSHDGH-----KTLKLFALMHKQG-ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG 547
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
D D +V+S + +
Sbjct: 548 YDLDLWVSSGI------------------------------------------------L 559
Query: 213 DGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
D +V+ GD+ A++ F+ +P V+W MISG +NG + A VF M++ V P+
Sbjct: 560 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEF 619
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
T+ ++ A S L ALE G+ +H A K D +G++++DMYAKCGS++ A +F++I
Sbjct: 620 TIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI 679
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
E N W+A++ GLA HG + L +++M+ G+ P V +IG+LSACSH+GL+ E
Sbjct: 680 E-MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEA 738
Query: 393 RSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACK 452
M GI+P +EHY C+ D + +M + +++ LL AC+
Sbjct: 739 YKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACR 798
Query: 453 MHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGC 512
+ G+ + G+RVA L++L P DS +YV LSN++A+ W + R MK V+KDPG
Sbjct: 799 VQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGF 858
Query: 513 SWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESA 572
SWIE+ IH F+V+D S+ + + I ++++ I+ GY P L++++EE+KE A
Sbjct: 859 SWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERA 918
Query: 573 LHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHH 632
L+YHSE++A+AFGL+ST P TP+R++KNLRVC DCH+++K I+++Y R+I++RD RFH
Sbjct: 919 LYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHR 978
Query: 633 FEKGVCSCMDYW 644
F+ G+CSC DYW
Sbjct: 979 FKDGICSCGDYW 990
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 169/368 (45%), Gaps = 60/368 (16%)
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
L YAR+ F +M + + SWN+I+ A+A++ + +N +A F ++ + +V +R T
Sbjct: 90 LTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTL 148
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVS 185
+LK C G + + HG+ K+GLD DEFVA LV +Y G +++ +LF
Sbjct: 149 SPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLF----- 203
Query: 186 HFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLG-------------------------- 219
+ M VVLWN+M+ ++ +G
Sbjct: 204 ------------EEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRL 251
Query: 220 ---------DIGASRKLFNKMPQRSV---VSWNVMISGYAQNGFFKEAMDVFHDMQMGDV 267
D G + N SV + N +S Y +G + + F DM DV
Sbjct: 252 LARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDV 311
Query: 268 SPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQ 327
+ +T + +L ++ +L LG+ VH A K +++ + +++I+MY K A
Sbjct: 312 ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFART 371
Query: 328 VFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAG 387
VF+ + ++++ I+W+++I G+A +G +A+ + ++ + G+ P +L A S
Sbjct: 372 VFDNM-SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS-- 428
Query: 388 LIEEGRSL 395
+ EG SL
Sbjct: 429 -LPEGLSL 435
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 160/371 (43%), Gaps = 59/371 (15%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+Q+H +K GL D + R +AR F M+ + SWN++I A
Sbjct: 335 QQVHCMALKLGL--DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR-IQEGKEIHGFVVKL 151
+ + +EA+ F Q+ GL +P+++T SVLKA + + + K++H +K+
Sbjct: 393 QNGLE-----VEAVCLFMQLLRCGL-KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 152 GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVM 211
+D FV++ L+ Y+ M++A +LF + +FD
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFERH--NFD----------------------- 481
Query: 212 IDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNY 271
+V+WN M++GY Q+ + + +F M +
Sbjct: 482 ------------------------LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD 517
Query: 272 ITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK 331
TL +V L A+ GK VH YA K+ ++D + S ++DMY KCG + A F+
Sbjct: 518 FTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 332 IENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEE 391
I + + W+ +I G +G A + +M+ GV P + L A S +E+
Sbjct: 578 IPVPDD-VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 636
Query: 392 GRSLFNHMVKV 402
GR + + +K+
Sbjct: 637 GRQIHANALKL 647
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 69/343 (20%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILK-FLSVSDRRDLKYARKFFTQ 75
+++F +I Q KQ+HA+ IK+G D ++ IL ++ D ++A F
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA---FDS 577
Query: 76 MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKM 135
+ P+ +W T+I E +++ A F QM G++ P+ FT ++ KA + +
Sbjct: 578 IPVPDDVAWTTMISGCIENGEEE-----RAFHVFSQMRLMGVL-PDEFTIATLAKASSCL 631
Query: 136 GRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLV 195
+++G++IH +KL ND FV ++LV MYA CG ++DAY LF
Sbjct: 632 TALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF--------------- 676
Query: 196 RNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEA 255
KR++ + WN M+ G AQ+G KE
Sbjct: 677 --KRIEMMNITAWNAMLVGL-------------------------------AQHGEGKET 703
Query: 256 MDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL------YAEKNEIEIDDVLG 309
+ +F M+ + P+ +T + VL A S G + + H+ Y K EIE L
Sbjct: 704 LQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS-EAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHG 352
A+ + G V++A + E + + +A + ++ + G
Sbjct: 763 DAL----GRAGLVKQAENLIESMSMEASASMYRTLLAACRVQG 801
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 145/342 (42%), Gaps = 53/342 (15%)
Query: 115 EGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVME 174
E VE ++ TF +L K+ + G+++H +KLGLD
Sbjct: 308 ESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL------------------- 348
Query: 175 DAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR 234
++ + N +I+ + +L G +R +F+ M +R
Sbjct: 349 -----------------------------MLTVSNSLINMYCKLRKFGFARTVFDNMSER 379
Query: 235 SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRL-GALELGKWV 293
++SWN +I+G AQNG EA+ +F + + P+ T+ SVL A S L L L K V
Sbjct: 380 DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQV 439
Query: 294 HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGR 353
H++A K D + +A+ID Y++ +++A +FE+ + + + W+A++ G
Sbjct: 440 HVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER--HNFDLVAWNAMMAGYTQSHD 497
Query: 354 ANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYG 413
+ L + M + G D + C I +G+ + + +K G + +
Sbjct: 498 GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK-SGYDLDLWVSS 556
Query: 414 CMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHG 455
++D ++P+ PDDV W ++ C +G
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENG 597
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Query: 207 LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNG-----FFKEAMDVFHD 261
L N +I + + G + +R++F+KMP R +VSWN +++ YAQ+ ++A +F
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
++ V + +TL +L G + + H YA K ++ D+ + A++++Y K G
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGK 195
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVV 375
V++ +FE++ ++ + W+ ++ G +A+D +G+ P ++
Sbjct: 196 VKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Query: 287 LELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIG 346
L LGK H E + L + +I MY+KCGS+ A +VF+K+ + ++ ++W++I+
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD-RDLVSWNSILA 113
Query: 347 GLAMHGRA-----NDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
A A +R ++Q V + + +L C H+G + S + K
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 402 VVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGA 450
+G++ G +V+ MP R D V+W +L A
Sbjct: 174 -IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/665 (32%), Positives = 345/665 (51%), Gaps = 62/665 (9%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+Q+HA+ K G + +L + D++ A +F + N WN ++ A+
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKC--ADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
DD +N F QM E +V PN++T+PS+LK C ++G ++ G++IH ++K
Sbjct: 467 LLDD--LRNSFR---IFRQMQIEEIV-PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAY---------------LLFSNYVSH-FDNNSTKLVR 196
+ +V S L+ MYA G ++ A+ + + Y + FD+ + R
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580
Query: 197 N-----------------------KRMQEGVVV--------------LWNVMIDGFVRLG 219
+ ++EG + N ++ + R G
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 220 DIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
I S F + ++WN ++SG+ Q+G +EA+ VF M + N T S +
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAI 339
A S ++ GK VH K + + + +A+I MYAKCGS+ A + F ++ + KN +
Sbjct: 701 AASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV-STKNEV 759
Query: 340 TWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
+W+AII + HG ++ALD + +M + V P V +G+LSACSH GL+++G + F M
Sbjct: 760 SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 819
Query: 400 VKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKM 459
G+ P+ EHY C+VD + MPI+PD ++W+ LL AC +H N+++
Sbjct: 820 NSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEI 879
Query: 460 GERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDG 519
GE A L++L P DS +YV LSN++A W R KMKE V+K+PG SWIE+
Sbjct: 880 GEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKN 939
Query: 520 VIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSER 579
IH F V D++HP A EI ++++ R GY + +L + E+K+ + HSE+
Sbjct: 940 SIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEK 999
Query: 580 IAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCS 639
+AI+FGL+S P+ ++KNLRVC DCH+ IK +S++ R+IIVRD RFHHFE G CS
Sbjct: 1000 LAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACS 1059
Query: 640 CMDYW 644
C DYW
Sbjct: 1060 CKDYW 1064
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 201/487 (41%), Gaps = 68/487 (13%)
Query: 32 LKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAF 91
++QIHA + GL + ++ S + DL AR+ F + + SW +I
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL--ARRVFDGLRLKDHSSWVAMISGL 263
Query: 92 AETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
++ + + EA+ F M G++ P + F SVL AC K+ ++ G+++HG V+KL
Sbjct: 264 SKNECE-----AEAIRLFCDMYVLGIM-PTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 152 GLDNDEFVASNLVRMY-------------------------------AMCGVMEDAYLLF 180
G +D +V + LV +Y + CG E A LF
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 181 SNYVSHFD------NNSTKLV----------RNKRMQEGVVVLW---NVMIDG-----FV 216
H D N LV R +++ L N I+G +
Sbjct: 378 KRM--HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 217 RLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVS 276
+ DI + F + +VV WNVM+ Y + + +F MQ+ ++ PN T S
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 277 VLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK 336
+L RLG LELG+ +H K +++ + S +IDMYAK G ++ A + + K
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG-K 554
Query: 337 NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLF 396
+ ++W+ +I G + + AL +R+M G+ +V +SAC+ ++EG+ +
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 397 NHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGN 456
V G + +V D++ W AL+ + GN
Sbjct: 615 AQAC-VSGFSSDLPFQNALV-TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 457 VKMGERV 463
+ RV
Sbjct: 673 NEEALRV 679
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 212/499 (42%), Gaps = 68/499 (13%)
Query: 13 PTHPSSLFPQIARCKSIKQLK---QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYA 69
PT P + ++ CK I+ L+ Q+H +K G D ++ +L A
Sbjct: 286 PT-PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF--HLGNLISA 342
Query: 70 RKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVL 129
F+ M+ + ++NT+I ++ + +A+ F +M +GL EP+ T S++
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGE-----KAMELFKRMHLDGL-EPDSNTLASLV 396
Query: 130 KACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF-----SNYV 184
AC+ G + G+++H + KLG ++ + L+ +YA C +E A F N V
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 185 ---------SHFDN--NSTKLVRNKRMQEGV----------------------------- 204
D+ NS ++ R +++E V
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 205 --------VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAM 256
+ +V+ID + +LG + + + + + VVSW MI+GY Q F +A+
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
F M + + + L + + A + L AL+ G+ +H A + D +A++ +Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
++CG +E++ FE+ E N I W+A++ G G +AL + +M + G+ + +
Sbjct: 637 SRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
+ A S +++G+ + + K G + E ++ L +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITK-TGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 754
Query: 437 IRPDDVIWKALLGACKMHG 455
+ ++V W A++ A HG
Sbjct: 755 TK-NEVSWNAIINAYSKHG 772
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 195/431 (45%), Gaps = 67/431 (15%)
Query: 28 SIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTI 87
S+ + +++H+ +K GL + + ++ F + DL A K F +M F+WN +
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF--KGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 88 IRAFAETDDDDYKNPL-EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEG--KEI 144
I+ A +N + E G F +M SE V PN TF VL+AC + G + ++I
Sbjct: 158 IKELAS------RNLIGEVFGLFVRMVSEN-VTPNEGTFSGVLEAC-RGGSVAFDVVEQI 209
Query: 145 HGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY-----------VSHFDNN--- 190
H ++ GL + V + L+ +Y+ G ++ A +F +S N
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 191 ----------------------STKLVRNKRMQE--------GVVVLWNVMIDGFV---- 216
S+ L K+++ G+V+ D +V
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 217 -----RLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNY 271
LG++ ++ +F+ M QR V++N +I+G +Q G+ ++AM++F M + + P+
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 272 ITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK 331
TL S++ A S G L G+ +H Y K ++ + A++++YAKC +E A+ F +
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 332 IENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEE 391
E +N + W+ ++ + ++ +R+MQ + P Y +L C G +E
Sbjct: 450 TE-VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 392 GRSLFNHMVKV 402
G + + ++K
Sbjct: 509 GEQIHSQIIKT 519
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 53/288 (18%)
Query: 118 VEPNRFTFPSVLKACAKM-GRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDA 176
+ PN T +L+ C K G + EG+++H ++KLGLD++ ++ L Y
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFY--------- 130
Query: 177 YLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV 236
LF GD+ + K+F++MP+R++
Sbjct: 131 --LFK-------------------------------------GDLYGAFKVFDEMPERTI 151
Query: 237 VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLG--ALELGKWVH 294
+WN MI A E +F M +V+PN T VL A R G A ++ + +H
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIH 210
Query: 295 LYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRA 354
+ V+ + +ID+Y++ G V+ A +VF+ + K ++ +W A+I GL+ +
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS-SWVAMISGLSKNECE 269
Query: 355 NDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV 402
+A+ + M G+ PT + +LSAC +E G L ++K+
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 28 SIKQLKQIHAHFIKTGLIGDPLAAAEILKFL----SVSDRRDLKYARKFFTQMNNPNCFS 83
++KQ KQ+HA KTG + ++ S+SD A K F +++ N S
Sbjct: 707 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD------AEKQFLEVSTKNEVS 760
Query: 84 WNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEG 141
WN II A+++ + EAL F QM V PN T VL AC+ +G + +G
Sbjct: 761 WNAIINAYSK-----HGFGSEALDSFDQMIHSN-VRPNHVTLVGVLSACSHIGLVDKG 812
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/647 (34%), Positives = 353/647 (54%), Gaps = 54/647 (8%)
Query: 30 KQLKQIHAHFIKTGLIGDPLAAAEILKFLS--VSDRRDLKYARKFFTQMNNPNCFSWNTI 87
KQ Q HA +K+G + ++ S S L ARK F ++ + SW T+
Sbjct: 166 KQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTM 225
Query: 88 IRAFA------------ETDDDDYK----NPL-----------EALGFFGQMCSEGLVEP 120
+ + E DD+ K N + EAL +M S G +E
Sbjct: 226 MTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG-IEL 284
Query: 121 NRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF 180
+ FT+PSV++ACA G +Q GK++H +V++ D ++LV +Y CG ++A +F
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIF 343
Query: 181 SNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWN 240
++M +V WN ++ G+V G IG ++ +F +M +++++SW
Sbjct: 344 -----------------EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWM 386
Query: 241 VMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKN 300
+MISG A+NGF +E + +F M+ P + + + LGA G+ H A+
Sbjct: 387 IMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYH--AQLL 444
Query: 301 EIEIDDVL--GSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDAL 358
+I D L G+A+I MYAKCG VE+A QVF + ++++W+A+I L HG +A+
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGHGAEAV 503
Query: 359 DYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDX 418
D Y +M + G+ P + + +L+ACSHAGL+++GR F+ M V I P +HY ++D
Sbjct: 504 DVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDL 563
Query: 419 XXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSY 478
+ ++P +P IW+ALL C++HGN+++G A L L P G+Y
Sbjct: 564 LCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTY 623
Query: 479 VALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIR 538
+ LSN+ A+ G W V VR M++ V+K+ CSWIE++ +H FLV+D SHP A+ +
Sbjct: 624 MLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVY 683
Query: 539 SMLEEISNRIRSAGYRPNITQVLLNMDEE-KKESALHYHSERIAIAFGLISTRPQTPLRI 597
L+++ +R GY P+ + VL +++ + KE L HSE+IA+AFGL+ P T +RI
Sbjct: 684 IYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRI 743
Query: 598 VKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
KNLR C DCH+ + +S + +R II+RDRKRFHHF G CSC ++W
Sbjct: 744 FKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 136/317 (42%), Gaps = 57/317 (17%)
Query: 125 FPSVLKACAKMGR--IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSN 182
+ + L+ C + R +Q + +HG ++ G + + L+ +Y + A LF
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 183 YVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP--QRSVVSWN 240
+S D K+ R M+ G+ GDI +R +F K P R V +N
Sbjct: 75 -ISEPD----KIART------------TMVSGYCASGDITLARGVFEKAPVCMRDTVMYN 117
Query: 241 VMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALE-LGKWVHLYAEK 299
MI+G++ N A+++F M+ P+ T SVL ++ + E H A K
Sbjct: 118 AMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALK 177
Query: 300 NEIEIDDVLGSAVIDMYAKCGS----VEKAIQVFEKIENK-------------KNA---- 338
+ + +A++ +Y+KC S + A +VF++I K KN
Sbjct: 178 SGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDL 237
Query: 339 --------------ITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS 384
+ ++A+I G G +AL+ R+M +G+ + Y ++ AC+
Sbjct: 238 GEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACA 297
Query: 385 HAGLIEEGRSLFNHMVK 401
AGL++ G+ + ++++
Sbjct: 298 TAGLLQLGKQVHAYVLR 314
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/655 (33%), Positives = 355/655 (54%), Gaps = 30/655 (4%)
Query: 10 ATRPTHP--SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLK 67
A R P S I CK L+ +HA ++ G++ +AA +++ S+ D
Sbjct: 21 ADRQASPDESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAA-QLVSCSSLLKSPD-- 77
Query: 68 YARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPS 127
Y+ F N F N +IR E + ++ F M G V+P+R TFP
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFE-----SSVRHFILMLRLG-VKPDRLTFPF 131
Query: 128 VLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHF 187
VLK+ +K+G G+ +H +K +D D FV +LV MYA G ++ A+ +F
Sbjct: 132 VLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRI 191
Query: 188 DNNSTKL--------VRNKRMQEGVVVL----------WNVMIDGFVRLGDIGASRKLFN 229
S + R K M + W+ +I G+V G++ +++LF
Sbjct: 192 KKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFE 251
Query: 230 KMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALEL 289
MP+++VVSW +I+G++Q G ++ A+ + +M + PN T+ +VL A S+ GAL
Sbjct: 252 LMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGS 311
Query: 290 GKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLA 349
G +H Y N I++D +G+A++DMYAKCG ++ A VF + N K+ ++W+A+I G A
Sbjct: 312 GIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNM-NHKDILSWTAMIQGWA 370
Query: 350 MHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRV 409
+HGR + A+ +R+M +G P +VV++ +L+AC ++ ++ G + F+ M IEP +
Sbjct: 371 VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTL 430
Query: 410 EHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMK 469
+HY +VD V NMPI PD W AL ACK H + E V++ L++
Sbjct: 431 KHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLE 490
Query: 470 LFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDE 529
L P GSY+ L AS+GN V + RL +++ + G S+IE+DG +++F D
Sbjct: 491 LDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDY 550
Query: 530 SHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLIST 589
SH +EI L+EI + GY P + +++EE+KE+ HSE++A+ G + T
Sbjct: 551 SHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRT 610
Query: 590 RPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
P T +RI+KNLR+C DCHS +K +S+I +R I++RD ++FHHF+ G CSC DYW
Sbjct: 611 APGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/666 (32%), Positives = 346/666 (51%), Gaps = 60/666 (9%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDR-RDLKYARKFFTQMNNPNCFSWNTIIRAF 91
+ IHAH I T A +I +++ + R+ ARK F M N SW +++ +
Sbjct: 51 ESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGY 110
Query: 92 AETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
+ D E L F M G PN F V K+C+ GRI+EGK+ HG +K
Sbjct: 111 QNSGFD-----FEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKY 165
Query: 152 GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY----VSHFDNNSTKLVRNKRMQEGVVVL 207
GL + EFV + LV MY++C +A + + +S F + + + +EG+ VL
Sbjct: 166 GLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVL 225
Query: 208 ---------WN----------------------------------------VMIDGFVRL 218
WN +I+ + +
Sbjct: 226 RKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKC 285
Query: 219 GDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVL 278
G + ++++F+ +++ ++ Y Q+ F+EA+++F M +V PN T +L
Sbjct: 286 GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILL 345
Query: 279 PAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNA 338
+I+ L L+ G +H K+ ++G+A+++MYAK GS+E A + F + ++
Sbjct: 346 NSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGM-TFRDI 404
Query: 339 ITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNH 398
+TW+ +I G + HG +AL+ + +M G P + +IG+L ACSH G +E+G FN
Sbjct: 405 VTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQ 464
Query: 399 MVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVK 458
++K ++P ++HY C+V + PI D V W+ LL AC + N +
Sbjct: 465 LMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYR 524
Query: 459 MGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEID 518
+G++VA ++ +P+DSG YV LSNI A W GV +VR M V+K+PG SWI I
Sbjct: 525 LGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIR 584
Query: 519 GVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSE 578
H FL ED HP I + ++E+ ++I+ GY P++ ++DEE++E L YHSE
Sbjct: 585 NQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSE 644
Query: 579 RIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVC 638
++A+A+GLI T ++PL + KN+R+C+DCHS+IKLIS+I KR I++RD RFHHF G C
Sbjct: 645 KLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQC 704
Query: 639 SCMDYW 644
SC DYW
Sbjct: 705 SCCDYW 710
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/615 (34%), Positives = 337/615 (54%), Gaps = 61/615 (9%)
Query: 23 IARCKSIKQLKQ---IHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNP 79
+ +C K L Q +HAH +++ D + +L + L+ ARK F +M
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG--SLEEARKVFEKMPQR 124
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
+ +W T+I +++ D P +AL FF QM G PN FT SV+KA A R
Sbjct: 125 DFVTWTTLISGYSQHD-----RPCDALLFFNQMLRFG-YSPNEFTLSSVIKAAAAERRGC 178
Query: 140 EGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKR 199
G ++HGF VK G D++ V S L
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSAL------------------------------------ 202
Query: 200 MQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVF 259
+D + R G + ++ +F+ + R+ VSWN +I+G+A+ ++A+++F
Sbjct: 203 ------------LDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF 250
Query: 260 HDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC 319
M P++ + S+ A S G LE GKWVH Y K+ ++ G+ ++DMYAK
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 320 GSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGL 379
GS+ A ++F+++ K++ ++W++++ A HG +A+ ++ +M++ G+ P ++ ++ +
Sbjct: 311 GSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSV 369
Query: 380 LSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRP 439
L+ACSH+GL++EG + ++K GI P HY +VD + MPI P
Sbjct: 370 LTACSHSGLLDEGWHYYE-LMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP 428
Query: 440 DDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRL 499
IWKALL AC+MH N ++G A + +L P D G +V L NI+AS G W VR
Sbjct: 429 TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 488
Query: 500 KMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQ 559
KMKE V+K+P CSW+EI+ IH F+ DE HP+ +EI EE+ +I+ GY P+ +
Sbjct: 489 KMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSH 548
Query: 560 VLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYK 619
V++++D++++E L YHSE+IA+AF L++T P + + I KN+RVC DCH++IKL S++
Sbjct: 549 VIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVG 608
Query: 620 RKIIVRDRKRFHHFE 634
R+IIVRD RFHHF+
Sbjct: 609 REIIVRDTNRFHHFK 623
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 12 RPTHPS--SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYA 69
RP+H S SLF + ++Q K +HA+ IK+G A +L + S + A
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG--SIHDA 316
Query: 70 RKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVL 129
RK F ++ + SWN+++ A+A+ + EA+ +F +M G + PN +F SVL
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQ-----HGFGKEAVWWFEEMRRVG-IRPNEISFLSVL 370
Query: 130 KACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDA 176
AC+ G + EG + + K G+ + + +V + G + A
Sbjct: 371 TACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/623 (33%), Positives = 334/623 (53%), Gaps = 63/623 (10%)
Query: 28 SIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTI 87
S+ ++H H + G DP A +++ S D + YARK F + + WN +
Sbjct: 92 SLSDALRVHRHILDNGSDQDPFLATKLIGMYS--DLGSVDYARKVFDKTRKRTIYVWNAL 149
Query: 88 IRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC----AKMGRIQEGKE 143
RA + E LG + +M G VE +RFT+ VLKAC + + +GKE
Sbjct: 150 FRALTLAGHGE-----EVLGLYWKMNRIG-VESDRFTYTYVLKACVASECTVNHLMKGKE 203
Query: 144 IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEG 203
IH + + G Y SH
Sbjct: 204 IHAHLTRRG------------------------------YSSH----------------- 216
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM- 262
V + ++D + R G + + +F MP R+VVSW+ MI+ YA+NG EA+ F +M
Sbjct: 217 -VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 263 -QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
+ D SPN +T+VSVL A + L ALE GK +H Y + ++ + SA++ MY +CG
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
+E +VF+++ ++ + ++W+++I +HG A+ + +M G +PT V ++ +L
Sbjct: 336 LEVGQRVFDRMHDR-DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLG 394
Query: 382 ACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDD 441
ACSH GL+EEG+ LF M + GI+P++EHY CMVD V +M P
Sbjct: 395 ACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGP 454
Query: 442 VIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKM 501
+W +LLG+C++HGNV++ ER +R L L P ++G+YV L++I+A W V V+ +
Sbjct: 455 KVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLL 514
Query: 502 KEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVL 561
+ ++K PG W+E+ ++ F+ DE +P ++I + L +++ ++ GY P VL
Sbjct: 515 EHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVL 574
Query: 562 LNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRK 621
++ E+KE + HSE++A+AFGLI+T P+RI KNLR+CEDCH K IS+ +++
Sbjct: 575 YELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKE 634
Query: 622 IIVRDRKRFHHFEKGVCSCMDYW 644
I+VRD RFH F+ GVCSC DYW
Sbjct: 635 ILVRDVNRFHRFKNGVCSCGDYW 657
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 121/288 (42%), Gaps = 55/288 (19%)
Query: 120 PNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL 179
P++ T+ ++ C + + +H ++ G D D F+A+ L+ MY+ G ++ A
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYA--- 131
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSW 239
RK+F+K +R++ W
Sbjct: 132 ---------------------------------------------RKVFDKTRKRTIYVW 146
Query: 240 NVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAI----SRLGALELGKWVHL 295
N + G +E + ++ M V + T VL A + L GK +H
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 206
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAN 355
+ + + + ++DMYA+ G V+ A VF + +N ++WSA+I A +G+A
Sbjct: 207 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP-VRNVVSWSAMIACYAKNGKAF 265
Query: 356 DALDYYRKM--QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+AL +R+M + +P V + +L AC+ +E+G+ + ++++
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 11/255 (4%)
Query: 237 VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLY 296
+S N +I + G K+A+ V + SP+ T ++ +L VH +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 297 AEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAND 356
N + D L + +I MY+ GSV+ A +VF+K K+ W+A+ L + G +
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTR-KRTIYVWNALFRALTLAGHGEE 161
Query: 357 ALDYYRKMQQAGVTPTDVVYIGLLSACSHAGL----IEEGRSLFNHMVKVVGIEPRVEHY 412
L Y KM + GV Y +L AC + + +G+ + H+ + G V
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTR-RGYSSHVYIM 220
Query: 413 GCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFP 472
+VD MP+R + V W A++ +G R R +M+
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 473 HDSGSYVALSNIFAS 487
S + V + ++ +
Sbjct: 280 DSSPNSVTMVSVLQA 294
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/617 (33%), Positives = 337/617 (54%), Gaps = 42/617 (6%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDD------YKNP--------LEALGFF- 109
++ ARK F M N SW +++ + D +K P + +GF
Sbjct: 94 EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQ 153
Query: 110 ----GQMCS--EGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
C E + + + S++ K GR+ E +EI + + + + +
Sbjct: 154 DGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTM 209
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKL----VRNKRMQEG----------VVVLWN 209
V Y ++DA +F + + T + V+N R+++ V+ N
Sbjct: 210 VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 269
Query: 210 VMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSP 269
MI G + G+I +R++F+ M +R+ SW +I + +NGF EA+D+F MQ V P
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 270 NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF 329
+ TL+S+L + L +L GK VH + + ++D + S ++ MY KCG + K+ +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT-PTDVVYIGLLSACSHAGL 388
++ +K + I W++II G A HG +AL + +M +G T P +V ++ LSACS+AG+
Sbjct: 390 DRFPSK-DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 389 IEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALL 448
+EEG ++ M V G++P HY CMVD + +M + PD +W +LL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 449 GACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRK 508
GAC+ H + + E A+ L+++ P +SG+Y+ LSN++AS+G W V E+R MK VRK
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 509 DPGCSWIEIDGVIHEFLVED-ESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEE 567
PGCSW E++ +H F SHP + I +L+E+ +R AGY P+ + L ++DEE
Sbjct: 569 SPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEE 628
Query: 568 KKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDR 627
+K ++L YHSER+A+A+ L+ P+R++KNLRVC DCH++IK+IS++ +R+II+RD
Sbjct: 629 EKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDA 688
Query: 628 KRFHHFEKGVCSCMDYW 644
RFHHF G CSC DYW
Sbjct: 689 NRFHHFRNGECSCKDYW 705
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 70/307 (22%)
Query: 60 VSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVE 119
+ + ++ AR+ F M N SW T+I+ + LEAL F M +G V
Sbjct: 275 LGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFE-----LEALDLFILMQKQG-VR 328
Query: 120 PNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL 179
P T S+L CA + + GK++H +V+ D D +VAS L+ MY CG + + L+
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSW 239
F + S +++WN +I G
Sbjct: 389 FDRFPSK-----------------DIIMWNSIISG------------------------- 406
Query: 240 NVMISGYAQNGFFKEAMDVFHDMQM-GDVSPNYITLVSVLPAISRLGALELGKWVHLYAE 298
YA +G +EA+ VF +M + G PN +T V+ L A S G +E G + +Y
Sbjct: 407 ------YASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEG--LKIYE- 457
Query: 299 KNEIEIDDVLG--------SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAM 350
++ V G + ++DM + G +A+++ + + + +A W +++G
Sbjct: 458 ----SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRT 513
Query: 351 HGRANDA 357
H + + A
Sbjct: 514 HSQLDVA 520
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 156/352 (44%), Gaps = 47/352 (13%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKN--PLEALGFFGQMCSEGLVEPNRFTFP 126
ARK F ++ + SWN+++ + + N P +A F +M ++ N
Sbjct: 36 ARKLFDSCDSKSISSWNSMVAGY-------FANLMPRDARKLFDEMPDRNIISWN----- 83
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
++ K G I E ++ V L + + + LV+ Y G ++ A LF +
Sbjct: 84 GLVSGYMKNGEIDEARK----VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK-MPE 138
Query: 187 FDNNSTKLVRNKRMQEGVV---------------VLWNVMIDGFVRLGDIGASRKLFNKM 231
+ S ++ +Q+G + + MI G + G + +R++F++M
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 232 PQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSP--NYITLVSVLPAISRLGALEL 289
+RSV++W M++GY QN +A +F DV P ++ S+L + G +E
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTSMLMGYVQNGRIED 252
Query: 290 GKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLA 349
+ + + + +A+I + G + KA +VF+ ++ + +A +W +I
Sbjct: 253 AEELFEVMPVKPV----IACNAMISGLGQKGEIAKARRVFDSMKERNDA-SWQTVIKIHE 307
Query: 350 MHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+G +ALD + MQ+ GV PT I +LS C+ + G+ + +V+
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
NV I R+G I +RKLF+ +S+ SWN M++GY N ++A +F +M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP----D 76
Query: 269 PNYITLVSVLPAISRLGAL-ELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQ 327
N I+ ++ + G + E K L E+N + +A++ Y G V+ A
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS-----WTALVKGYVHNGKVDVAES 131
Query: 328 VFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAG 387
+F K+ +KN ++W+ ++ G GR +DA Y + ++ ++ G
Sbjct: 132 LFWKMP-EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEG 186
Query: 388 LIEEGRSLFNHMVK--VVGIEPRVEHYG 413
++E R +F+ M + V+ V YG
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGYG 214
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/579 (35%), Positives = 320/579 (55%), Gaps = 60/579 (10%)
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
L A + F QM N SW T+I A+++ K +AL M + V PN +T+
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKC-----KIHQKALELLVLMLRDN-VRPNVYTY 165
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVS 185
SVL++C M + + +H ++K GL++D FV S L
Sbjct: 166 SSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSAL---------------------- 200
Query: 186 HFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISG 245
ID F +LG+ + +F++M + WN +I G
Sbjct: 201 --------------------------IDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGG 234
Query: 246 YAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEID 305
+AQN A+++F M+ TL SVL A + L LELG H++ K + ++
Sbjct: 235 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL- 293
Query: 306 DVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQ 365
+L +A++DMY KCGS+E A++VF +++ +++ ITWS +I GLA +G + +AL + +M+
Sbjct: 294 -ILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQEALKLFERMK 351
Query: 366 QAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXX 425
+G P + +G+L ACSHAGL+E+G F M K+ GI+P EHYGCM+D
Sbjct: 352 SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKL 411
Query: 426 XXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIF 485
+ M PD V W+ LLGAC++ N+ + E A+ ++ L P D+G+Y LSNI+
Sbjct: 412 DDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIY 471
Query: 486 ASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEIS 545
A+ W V E+R +M++ ++K+PGCSWIE++ IH F++ D SHP+ E+ L ++
Sbjct: 472 ANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLI 531
Query: 546 NRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCE 605
+R+ GY P VL +++ E+ E +L +HSE++A+AFGL++ + +RI KNLR+C
Sbjct: 532 HRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICG 591
Query: 606 DCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
DCH KL S++ R I++RD R+HHF+ G CSC DYW
Sbjct: 592 DCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/682 (30%), Positives = 352/682 (51%), Gaps = 63/682 (9%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
S + + +S+ +Q+H +K+G ++ F + R D ARK F +M
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD--SARKVFDEM 256
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
+ SWN+II + + + L F QM G +E + T SV CA
Sbjct: 257 TERDVISWNSIINGYVSNGLAE-----KGLSVFVQMLVSG-IEIDLATIVSVFAGCADSR 310
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS--------NYVSHFD 188
I G+ +H VK ++ + L+ MY+ CG ++ A +F +Y S
Sbjct: 311 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 370
Query: 189 NNSTK-------------------------------------LVRNKRMQEGV------- 204
+ + L KR+ E +
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 205 -VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM- 262
+ + N ++D + + G + + +F++M + ++SWN +I GY++N + EA+ +F+ +
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
+ SP+ T+ VLPA + L A + G+ +H Y +N D + ++++DMYAKCG++
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 323 EKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
A +F+ I +K + ++W+ +I G MHG +A+ + +M+QAG+ ++ ++ LL A
Sbjct: 551 LLAHMLFDDIASK-DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 383 CSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV 442
CSH+GL++EG FN M IEP VEHY C+VD + NMPI PD
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 443 IWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMK 502
IW ALL C++H +VK+ E+VA + +L P ++G YV ++NI+A W V +R ++
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIG 729
Query: 503 EMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLL 562
+ +RK+PGCSWIEI G ++ F+ D S+P + I + L ++ R+ GY P L+
Sbjct: 730 QRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALI 789
Query: 563 NMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKI 622
+ +E +KE AL HSE++A+A G+IS+ +R+ KNLRVC DCH K +S++ +R+I
Sbjct: 790 DAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREI 849
Query: 623 IVRDRKRFHHFEKGVCSCMDYW 644
++RD RFH F+ G CSC +W
Sbjct: 850 VLRDSNRFHQFKDGHCSCRGFW 871
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 170/381 (44%), Gaps = 57/381 (14%)
Query: 13 PTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKF 72
P S+ A KS+K K++ G + D +++ L ++ DLK A +
Sbjct: 94 PRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLS--LMYTNCGDLKEASRV 151
Query: 73 FTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
F ++ WN ++ A++ D ++G F +M S G VE + +TF V K+
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFS-----GSIGLFKKMMSSG-VEMDSYTFSCVSKSF 205
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNST 192
+ + + G+++HGF++K G V ++LV Y ++ A +F
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFD----------- 254
Query: 193 KLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFF 252
M E V+ WN +I+G+V NG
Sbjct: 255 ------EMTERDVISWNSIINGYV-------------------------------SNGLA 277
Query: 253 KEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAV 312
++ + VF M + + + T+VSV + + LG+ VH K +D + +
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 313 IDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPT 372
+DMY+KCG ++ A VF ++ + ++ ++++++I G A G A +A+ + +M++ G++P
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 373 DVVYIGLLSACSHAGLIEEGR 393
+L+ C+ L++EG+
Sbjct: 397 VYTVTAVLNCCARYRLLDEGK 417
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 138/317 (43%), Gaps = 57/317 (17%)
Query: 85 NTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEI 144
NT +R F E+ + +N ++ L C G + + T SVL+ CA +++GKE+
Sbjct: 65 NTQLRRFCESGN--LENAVKLL------CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEV 116
Query: 145 HGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGV 204
F+ G D + S L MY C
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNC---------------------------------- 142
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
GD+ + ++F+++ + WN++++ A++G F ++ +F M
Sbjct: 143 --------------GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEK 324
V + T V + S L ++ G+ +H + K+ + +G++++ Y K V+
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDS 248
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS 384
A +VF+++ +++ I+W++II G +G A L + +M +G+ + + + C+
Sbjct: 249 ARKVFDEM-TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 385 HAGLIEEGRSLFNHMVK 401
+ LI GR++ + VK
Sbjct: 308 DSRLISLGRAVHSIGVK 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 234 RSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWV 293
RSV N + + ++G + A+ + D+ P TL SVL + +L+ GK V
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 116
Query: 294 HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGR 353
+ N ID LGS + MY CG +++A +VF++++ +K A+ W+ ++ LA G
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK-ALFWNILMNELAKSGD 175
Query: 354 ANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+ ++ ++KM +GV + + + S + G L ++K
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/591 (36%), Positives = 314/591 (53%), Gaps = 64/591 (10%)
Query: 55 LKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCS 114
L+F V D A K F QM N SW T+I D + EAL F M
Sbjct: 170 LQFGKVDD------ALKLFKQMPGKNVISWTTMICGL-----DQNERSGEALDLFKNMLR 218
Query: 115 EGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVME 174
+ +R F V+ ACA G ++HG ++KLG +E+V+++L+ YA C
Sbjct: 219 CCIKSTSR-PFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANC---- 273
Query: 175 DAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR 234
KR IG SRK+F++
Sbjct: 274 -----------------------KR---------------------IGDSRKVFDEKVHE 289
Query: 235 SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVH 294
V W ++SGY+ N ++A+ +F M + PN T S L + S LG L+ GK +H
Sbjct: 290 QVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 295 LYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRA 354
A K +E D +G++++ MY+ G+V A+ VF KI KK+ ++W++II G A HGR
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRG 408
Query: 355 NDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVG-IEPRVEHYG 413
A + +M + P ++ + GLLSACSH G +E+GR LF +M + I+ +++HY
Sbjct: 409 KWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYT 468
Query: 414 CMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPH 473
CMVD + M ++P++++W ALL AC+MH +V GE+ A + L
Sbjct: 469 CMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSK 528
Query: 474 DSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPR 533
S +YV LSNI+AS G W V ++R+KMK+ + K PG SW+ I G HEF D+ P
Sbjct: 529 SSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PH 586
Query: 534 AKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQT 593
I LE + +++ GY P+ L ++++E+KE L YHSER+AIAFGLI+T +
Sbjct: 587 CSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGS 646
Query: 594 PLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+ ++KNLRVCEDCH+ IKLIS + R+I++RD RFHHF+ G CSC DYW
Sbjct: 647 AVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 153/351 (43%), Gaps = 60/351 (17%)
Query: 3 LICEPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSD 62
L C + +RP + + A + Q+H IK G + + +A ++ F +
Sbjct: 217 LRCCIKSTSRPF--TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCK 274
Query: 63 RRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNR 122
R + +RK F + + W ++ ++ K +AL F M ++ PN+
Sbjct: 275 R--IGDSRKVFDEKVHEQVAVWTALLSGYSLN-----KKHEDALSIFSGMLRNSIL-PNQ 326
Query: 123 FTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSN 182
TF S L +C+ +G + GKE+HG VKLGL+ D FV ++LV MY+ G + DA
Sbjct: 327 STFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAV----- 381
Query: 183 YVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVM 242
+F K+ ++S+VSWN +
Sbjct: 382 -------------------------------------------SVFIKIFKKSIVSWNSI 398
Query: 243 ISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEI 302
I G AQ+G K A +F M + P+ IT +L A S G LE G+ + Y
Sbjct: 399 IVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGIN 458
Query: 303 EIDDVLG--SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMH 351
ID + + ++D+ +CG +++A ++ E++ K N + W A++ MH
Sbjct: 459 HIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMH 509
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 174/413 (42%), Gaps = 46/413 (11%)
Query: 64 RDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRF 123
R + AR+ F Q+ +P+ + +I + ++ ++AL F +M +V N
Sbjct: 49 RRIDEAREVFNQVPSPHVSLYTKMITGYTRSN-----RLVDALNLFDEMPVRDVVSWN-- 101
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMC------GVMEDAY 177
S++ C + G + ++ DE ++V AM G ++ A
Sbjct: 102 ---SMISGCVECGDMNTAVKLF----------DEMPERSVVSWTAMVNGCFRSGKVDQAE 148
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV 237
LF +M WN M+ G+++ G + + KLF +MP ++V+
Sbjct: 149 RLFY-----------------QMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVI 191
Query: 238 SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYA 297
SW MI G QN EA+D+F +M + V+ A + A +G VH
Sbjct: 192 SWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLI 251
Query: 298 EKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDA 357
K ++ + +++I YA C + + +VF++ +++ A+ W+A++ G +++ + DA
Sbjct: 252 IKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV-WTALLSGYSLNKKHEDA 310
Query: 358 LDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
L + M + + P + L++CS G ++ G+ + VK +G+E G +
Sbjct: 311 LSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK-LGLETDA-FVGNSLV 368
Query: 418 XXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKL 470
V + V W +++ C HG K + +++L
Sbjct: 369 VMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 58/282 (20%)
Query: 135 MGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF----SNYVSHFDNN 190
+ + GK F V + N E + N + + +++A +F S +VS +
Sbjct: 17 ISHVIHGKCYRSFSVTVEFQNREVLICN----HLLSRRIDEAREVFNQVPSPHVSLYTKM 72
Query: 191 STKLVRNKRMQEGV----------VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWN 240
T R+ R+ + + VV WN MI G V GD+ + KLF++MP+RSVVSW
Sbjct: 73 ITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWT 132
Query: 241 VMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKN 300
M++G ++G +A +F+ M + D + W
Sbjct: 133 AMVNGCFRSGKVDQAERLFYQMPVKDTAA----------------------W-------- 162
Query: 301 EIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDY 360
++++ Y + G V+ A+++F+++ KN I+W+ +I GL + R+ +ALD
Sbjct: 163 ---------NSMVHGYLQFGKVDDALKLFKQMPG-KNVISWTTMICGLDQNERSGEALDL 212
Query: 361 YRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV 402
++ M + + T + +++AC++A G + ++K+
Sbjct: 213 FKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKL 254
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 331/620 (53%), Gaps = 76/620 (12%)
Query: 84 WNTIIRAFAETDDDDYKNPL-EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
WN +R A Y++ E++ + M G P+ F+FP +LK+CA + G+
Sbjct: 21 WNVRLRELA------YQSLFSESISLYRSMLRSG-SSPDAFSFPFILKSCASLSLPVSGQ 73
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSN-------------YVSHFDN 189
++H V K G + + FV + L+ MY CG++ DA +F +S +
Sbjct: 74 QLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTA 133
Query: 190 NST---KLVRNKRMQE-GVVV-----------------LW-------------------- 208
NS +RM+E GV V LW
Sbjct: 134 NSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAV 193
Query: 209 -NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDV 267
N I +++ G + A R+LF++MP + +++WN +ISGY+QNG + ++++ M+ V
Sbjct: 194 LNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGV 253
Query: 268 SPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQ 327
P+ TLVSVL + + LGA ++G V E N + + +A I MYA+CG++ KA
Sbjct: 254 CPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARA 313
Query: 328 VFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAG 387
VF+ I K+ ++W+A+IG MHG L + M + G+ P V++ +LSACSH+G
Sbjct: 314 VFD-IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSG 372
Query: 388 LIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKAL 447
L ++G LF M + +EP EHY C+VD + +MP+ PD +W AL
Sbjct: 373 LTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGAL 432
Query: 448 LGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVR 507
LGACK+H NV M E +++ P++ G YV +SNI++ N G+ +R+ M+E R
Sbjct: 433 LGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFR 492
Query: 508 KDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEE 567
K PG S++E G +H FL D SH + +E+ ML+E+ ++ ++ NMD +
Sbjct: 493 KKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELET---------SVMELAGNMDCD 543
Query: 568 KKE---SALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIV 624
+ E S HSER+AIAFG++++ P T + ++KNLRVCEDCH +K +S+I R+ +V
Sbjct: 544 RGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVV 603
Query: 625 RDRKRFHHFEKGVCSCMDYW 644
RD RFH+F+ GVCSC DYW
Sbjct: 604 RDASRFHYFKDGVCSCKDYW 623
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/581 (35%), Positives = 318/581 (54%), Gaps = 56/581 (9%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
DL ARK F +M + +WN +I + + ++ E L F +M G P+ +T
Sbjct: 40 DLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNE-----EGLSLFREMHGLGF-SPDEYT 93
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
SV A + + G++IHG+ +K GL+ D V S+L MY
Sbjct: 94 LGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY----------------- 136
Query: 185 SHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMIS 244
+RN ++Q+G +V+ MP R++V+WN +I
Sbjct: 137 ----------MRNGKLQDGEIVI---------------------RSMPVRNLVAWNTLIM 165
Query: 245 GYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI 304
G AQNG + + ++ M++ PN IT V+VL + S L G+ +H A K
Sbjct: 166 GNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASS 225
Query: 305 DDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM 364
+ S++I MY+KCG + A + F + E+ ++ + WS++I HG+ ++A++ + M
Sbjct: 226 VVAVVSSLISMYSKCGCLGDAAKAFSERED-EDEVMWSSMISAYGFHGQGDEAIELFNTM 284
Query: 365 -QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXX 423
+Q + +V ++ LL ACSH+GL ++G LF+ MV+ G +P ++HY C+VD
Sbjct: 285 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAG 344
Query: 424 XXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSN 483
+ +MPI+ D VIWK LL AC +H N +M +RV + ++++ P+DS YV L+N
Sbjct: 345 CLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLAN 404
Query: 484 IFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEE 543
+ AS W V EVR M++ +V+K+ G SW E G +H+F + D S ++KEI S L+E
Sbjct: 405 VHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKE 464
Query: 544 ISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRV 603
++ ++ GY+P+ VL +MDEE+KES L HSE++A+AF L+ P+RI+KNLRV
Sbjct: 465 LTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRV 524
Query: 604 CEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
C DCH + K IS I R+I +RD RFHHF G CSC DYW
Sbjct: 525 CSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 131/267 (49%), Gaps = 21/267 (7%)
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDV 258
RM++ + N++I+G+VR GD+ +RK+F++MP R + +WN MI+G Q F +E + +
Sbjct: 19 RMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSL 78
Query: 259 FHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAK 318
F +M SP+ TL SV + L ++ +G+ +H Y K +E+D V+ S++ MY +
Sbjct: 79 FREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMR 138
Query: 319 CGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIG 378
G ++ V + +N + W+ +I G A +G L Y+ M+ +G P + ++
Sbjct: 139 NGKLQDGEIVIRSMP-VRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 197
Query: 379 LLSACSHAGLIEEGRSLFNHMVKV---------VGIEPRVEHYGCMVDXXXXXXXXXXXX 429
+LS+CS + +G+ + +K+ + GC+ D
Sbjct: 198 VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED-- 255
Query: 430 XXVLNMPIRPDDVIWKALLGACKMHGN 456
D+V+W +++ A HG
Sbjct: 256 ---------EDEVMWSSMISAYGFHGQ 273
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 151/366 (41%), Gaps = 60/366 (16%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
S+F A +S+ +QIH + IK GL D + + + + + L+ M
Sbjct: 96 SVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGK--LQDGEIVIRSMP 153
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
N +WNT+I A+ P L + M G PN+ TF +VL +C+ +
Sbjct: 154 VRNLVAWNTLIMGNAQNG-----CPETVLYLYKMMKISG-CRPNKITFVTVLSSCSDLAI 207
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
+G++IH +K+G + V S+L+ MY+ CG + DA FS
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS---------------- 251
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
+R E V+W+ MI S Y +G EA++
Sbjct: 252 EREDED-EVMWSSMI-------------------------------SAYGFHGQGDEAIE 279
Query: 258 VFHDM-QMGDVSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIEIDDVLGSAVIDM 315
+F+ M + ++ N + +++L A S G + G + + EK + + V+D+
Sbjct: 280 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDL 339
Query: 316 YAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVV 375
+ G +++A + + K + + W ++ +H A A ++++ Q + P D
Sbjct: 340 LGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSA 397
Query: 376 YIGLLS 381
LL+
Sbjct: 398 CYVLLA 403
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/665 (31%), Positives = 338/665 (50%), Gaps = 83/665 (12%)
Query: 10 ATRPTHPSSLFPQI----ARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRD 65
A +P P+S + + ++ +++++ K++H H +G + + +L+ +
Sbjct: 80 AKKP--PASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG--S 135
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAE--------------TDDDDYK----------- 100
L ARK F +M N + SWN ++ +AE T+ D Y
Sbjct: 136 LVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKK 195
Query: 101 -NPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFV 159
P EAL + M PN FT + A A + I+ GKEIHG +V+ GLD+DE
Sbjct: 196 DQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE-- 253
Query: 160 ASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLG 219
VLW+ ++D + + G
Sbjct: 254 ----------------------------------------------VLWSSLMDMYGKCG 267
Query: 220 DIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
I +R +F+K+ ++ VVSW MI Y ++ ++E +F ++ PN T VL
Sbjct: 268 CIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLN 327
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAI 339
A + L ELGK VH Y + + S+++DMY KCG++E A V + K + +
Sbjct: 328 ACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLV 386
Query: 340 TWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
+W+++IGG A +G+ ++AL Y+ + ++G P V ++ +LSAC+HAGL+E+G F +
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 400 VKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKM 459
+ + +HY C+VD + MP++P +W ++LG C +GN+ +
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDL 506
Query: 460 GERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDG 519
E A+ L K+ P + +YV ++NI+A+ G W ++R +M+E+ V K PG SW EI
Sbjct: 507 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKR 566
Query: 520 VIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSER 579
H F+ D SHP +I L E+ +++ GY P + VL ++++E+KE L YHSE+
Sbjct: 567 KRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEK 626
Query: 580 IAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCS 639
+A+AF ++ST T +++ KNLR C DCH +IK IS I KRKI VRD RFH FE G CS
Sbjct: 627 LAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCS 686
Query: 640 CMDYW 644
C DYW
Sbjct: 687 CGDYW 691
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/643 (32%), Positives = 334/643 (51%), Gaps = 89/643 (13%)
Query: 33 KQIHAHFIKTG-----LIGDPL--------AAAEILK-FLSVSDRRDLKY---------- 68
KQIH IK G L+G PL ++ K F + DR + Y
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218
Query: 69 -----ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPL--EALGFFGQMCSEGLVEPN 121
A + F M + SW +I+ A+ N L EA+ F +M +GL + +
Sbjct: 219 GMIEDALQLFRGMEK-DSVSWAAMIKGLAQ-------NGLAKEAIECFREMKVQGL-KMD 269
Query: 122 RFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS 181
++ F SVL AC +G I EGK+IH +++ + +V S L
Sbjct: 270 QYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL------------------ 311
Query: 182 NYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNV 241
ID + + + ++ +F++M Q++VVSW
Sbjct: 312 ------------------------------IDMYCKCKCLHYAKTVFDRMKQKNVVSWTA 341
Query: 242 MISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNE 301
M+ GY Q G +EA+ +F DMQ + P++ TL + A + + +LE G H A +
Sbjct: 342 MVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG 401
Query: 302 IEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYY 361
+ + ++++ +Y KCG ++ + ++F ++ N ++A++W+A++ A GRA + + +
Sbjct: 402 LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM-NVRDAVSWTAMVSAYAQFGRAVETIQLF 460
Query: 362 RKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXX 421
KM Q G+ P V G++SACS AGL+E+G+ F M GI P + HY CM+D
Sbjct: 461 DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR 520
Query: 422 XXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVAL 481
+ MP PD + W LL AC+ GN+++G+ A +L++L PH Y L
Sbjct: 521 SGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLL 580
Query: 482 SNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSML 541
S+I+AS+G W V ++R M+E +V+K+PG SWI+ G +H F +DES P +I + L
Sbjct: 581 SSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKL 640
Query: 542 EEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNL 601
EE++N+I GY+P+ + V +++E K L+YHSER+AIAFGLI P+R+ KNL
Sbjct: 641 EELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNL 700
Query: 602 RVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
RVC DCH++ K IS + R+I+VRD RFH F+ G CSC D+W
Sbjct: 701 RVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 213/466 (45%), Gaps = 55/466 (11%)
Query: 22 QIARCKSI------KQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQ 75
QI +C + + +K IH + I+ + I+ ++ + YAR+ F +
Sbjct: 9 QIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYAL--MKSSTYARRVFDR 66
Query: 76 MNNPNCFSWNTIIRAFAET----------------DDDDYKNPLE----------ALGFF 109
+ PN FSWN ++ A+++ D + +E A+ +
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 110 GQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAM 169
M + R T ++LK + G + GK+IHG V+KLG ++ V S L+ MYA
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 170 CGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFN 229
G + DA +F D+ +T V++N ++ G + G I + +LF
Sbjct: 187 VGCISDAKKVFYG----LDDRNT-------------VMYNSLMGGLLACGMIEDALQLFR 229
Query: 230 KMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALEL 289
M + S VSW MI G AQNG KEA++ F +M++ + + SVLPA LGA+
Sbjct: 230 GMEKDS-VSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 290 GKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLA 349
GK +H + + +GSA+IDMY KC + A VF++++ +KN ++W+A++ G
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYG 347
Query: 350 MHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRV 409
GRA +A+ + MQ++G+ P +SAC++ +EEG S F+ G+ V
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG-SQFHGKAITSGLIHYV 406
Query: 410 EHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHG 455
+V M +R D V W A++ A G
Sbjct: 407 TVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFG 451
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 156/367 (42%), Gaps = 65/367 (17%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
S+ P +I + KQIHA I+T + ++ + L YA+ F +M
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC--KCLHYAKTVFDRMK 332
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
N SW ++ + +T + EA+ F M G ++P+ +T + ACA +
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAE-----EAVKIFLDMQRSG-IDPDHYTLGQAISACANVSS 386
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
++EG + HG + GL + V+++LV +Y CG ++D ST+L
Sbjct: 387 LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD---------------STRL--- 428
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
FN+M R VSW M+S YAQ G E +
Sbjct: 429 ------------------------------FNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG--SAVIDM 315
+F M + P+ +TL V+ A SR G +E G+ + +E I +G S +ID+
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ-RYFKLMTSEYGIVPSIGHYSCMIDL 517
Query: 316 YAKCGSVEKAIQVFEKIENKKNAITWSAII------GGLAMHGRANDALDYYRKMQQAGV 369
+++ G +E+A++ + +AI W+ ++ G L + A ++L AG
Sbjct: 518 FSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577
Query: 370 TPTDVVY 376
T +Y
Sbjct: 578 TLLSSIY 584
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/648 (30%), Positives = 337/648 (52%), Gaps = 61/648 (9%)
Query: 1 MNLICEPTTATRPTHPSSLFPQIARCKS---IKQLKQIHAHFIKTGLIGDPLAAAEILKF 57
+ L+C ++ + + + +A C + ++ + +H + +GL + + ++
Sbjct: 347 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSM 406
Query: 58 LSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGL 117
++ +R+ QM + +WN +I +AE +D D +AL F M EG
Sbjct: 407 YG--KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPD-----KALAAFQTMRVEG- 458
Query: 118 VEPNRFTFPSVLKACAKMGRIQE-GKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDA 176
V N T SVL AC G + E GK +H ++V G ++DE V
Sbjct: 459 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK---------------- 502
Query: 177 YLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV 236
N +I + + GD+ +S+ LFN + R++
Sbjct: 503 --------------------------------NSLITMYAKCGDLSSSQDLFNGLDNRNI 530
Query: 237 VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLY 296
++WN M++ A +G +E + + M+ VS + + L A ++L LE G+ +H
Sbjct: 531 ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 590
Query: 297 AEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAND 356
A K E D + +A DMY+KCG + + +++ N+ + +W+ +I L HG +
Sbjct: 591 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNR-SLPSWNILISALGRHGYFEE 649
Query: 357 ALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
+ +M + G+ P V ++ LL+ACSH GL+++G + ++ + + G+EP +EH C++
Sbjct: 650 VCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 709
Query: 417 DXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSG 476
D + MP++P+D++W++LL +CK+HGN+ G + A L KL P D
Sbjct: 710 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS 769
Query: 477 SYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKE 536
YV SN+FA+ G W V VR +M +++K CSW+++ + F + D +HP+ E
Sbjct: 770 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 829
Query: 537 IRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLR 596
I + LE+I I+ +GY + +Q L + DEE+KE L HSER+A+A+ L+ST + +R
Sbjct: 830 IYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVR 889
Query: 597 IVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
I KNLR+C DCHS K +S + R+I++RD+ RFHHFE+G+CSC DYW
Sbjct: 890 IFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 220/509 (43%), Gaps = 69/509 (13%)
Query: 17 SSLFPQIARCKSI-KQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQ 75
+SL R S+ ++ Q+H K+GL+ D + IL V + +RK F +
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGL--VSCSRKVFEE 119
Query: 76 MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKM 135
M + N SW +++ ++ D P E + + M EG V N + V+ +C +
Sbjct: 120 MPDRNVVSWTSLMVGYS-----DKGEPEEVIDIYKGMRGEG-VGCNENSMSLVISSCGLL 173
Query: 136 GRIQEGKEIHGFVVKLGLDNDEFVASNLVRM----------------------------- 166
G++I G VVK GL++ V ++L+ M
Sbjct: 174 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 233
Query: 167 --YAMCGVMEDAYLLFSNYVSHFDN-NSTKL---------VRNKRMQEG----------- 203
YA G +E+++ +FS D NST + V +++ G
Sbjct: 234 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 293
Query: 204 -VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM 262
VV + N ++ + G + +F +MP + ++SWN +++ + +G +A+ + M
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 353
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
S NY+T S L A E G+ +H + + + ++G+A++ MY K G +
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 413
Query: 323 EKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
++ +V ++ +++ + W+A+IGG A + AL ++ M+ GV+ + + +LSA
Sbjct: 414 SESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 472
Query: 383 CSHAG-LIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDD 441
C G L+E G+ L ++V G E EH + + N +
Sbjct: 473 CLLPGDLLERGKPLHAYIVS-AGFESD-EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNI 530
Query: 442 VIWKALLGACKMHGNVKMGERVARTLMKL 470
+ W A+L A HG+ GE V + + K+
Sbjct: 531 ITWNAMLAANAHHGH---GEEVLKLVSKM 556
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 190/439 (43%), Gaps = 63/439 (14%)
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
+K AR F M N SWNT++ LE + FF +MC G ++P+ F
Sbjct: 8 VKPARHLFDIMPVRNEVSWNTMMSGIVRVG-----LYLEGMEFFRKMCDLG-IKPSSFVI 61
Query: 126 PSVLKACAKMGRI-QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS--- 181
S++ AC + G + +EG ++HGFV K GL +D +V++ ++ +Y + G++ + +F
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 182 --NYVS-----------------------------HFDNNSTKLVRN------------- 197
N VS + NS LV +
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 198 ------KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
K E + + N +I +G++ + +F++M +R +SWN + + YAQNG
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
+E+ +F M+ N T+ ++L + + + G+ +H K + + +
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 301
Query: 312 VIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
++ MYA G +A VF+++ K+ I+W++++ GR+ DAL M +G +
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXX 431
V + L+AC E+GR + + +V V G+ +V
Sbjct: 361 NYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 432 VLNMPIRPDDVIWKALLGA 450
+L MP R D V W AL+G
Sbjct: 420 LLQMP-RRDVVAWNALIGG 437
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 140/280 (50%), Gaps = 12/280 (4%)
Query: 215 FVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITL 274
+ + G + +R LF+ MP R+ VSWN M+SG + G + E M+ F M + P+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 275 VSVLPAISRLGAL-ELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE 333
S++ A R G++ G VH + K+ + D + +A++ +Y G V + +VFE++
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 334 NKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEE-- 391
+ +N ++W++++ G + G + +D Y+ M+ GV + ++S+C GL+++
Sbjct: 122 D-RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDES 177
Query: 392 -GRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGA 450
GR + +VK G+E ++ ++ M R D + W ++ A
Sbjct: 178 LGRQIIGQVVK-SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAA 235
Query: 451 CKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGN 490
+G+++ R+ +LM+ F HD + +S + + G+
Sbjct: 236 YAQNGHIEESFRIF-SLMRRF-HDEVNSTTVSTLLSVLGH 273
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/598 (34%), Positives = 316/598 (52%), Gaps = 44/598 (7%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDD----------YKNPLEALGFFGQMCSEGLV 118
A F +M N SW + + D K+ + + G +C EG V
Sbjct: 129 AESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRV 188
Query: 119 EPNRF-----------TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMY 167
+ R T+ +++ + R+ +++ ++ + E ++++ Y
Sbjct: 189 DEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKL----FEVMPEKTEVSWTSMLLGY 244
Query: 168 AMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKL 227
+ G +EDA F + M V+ N MI GF +G+I +R++
Sbjct: 245 TLSGRIEDAEEFF-----------------EVMPMKPVIACNAMIVGFGEVGEISKARRV 287
Query: 228 FNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGAL 287
F+ M R +W MI Y + GF EA+D+F MQ V P++ +L+S+L + L +L
Sbjct: 288 FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 347
Query: 288 ELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGG 347
+ G+ VH + + + + D + S ++ MY KCG + KA VF++ + K+ I W++II G
Sbjct: 348 QYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF-SSKDIIMWNSIISG 406
Query: 348 LAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEP 407
A HG +AL + +M +G P V I +L+ACS+AG +EEG +F M + P
Sbjct: 407 YASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTP 466
Query: 408 RVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTL 467
VEHY C VD + +M I+PD +W ALLGACK H + + E A+ L
Sbjct: 467 TVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKL 526
Query: 468 MKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVE 527
+ P ++G+YV LS+I ASR W V VR M+ +V K PGCSWIE+ +H F
Sbjct: 527 FENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRG 586
Query: 528 D-ESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGL 586
++HP I MLE+ +R AGY P+ + VL ++DEE+K +L HSER+A+A+GL
Sbjct: 587 GIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGL 646
Query: 587 ISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+ P+R++KNLRVC DCH++IKLIS++ +R+II+RD RFHHF G CSC DYW
Sbjct: 647 LKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 156/362 (43%), Gaps = 67/362 (18%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKN--PLEALGFFGQMCSEGLVEPNRFTFP 126
ARKFF + SWN+I+ + + N P EA F +M E N ++
Sbjct: 36 ARKFFDSLQFKAIGSWNSIVSGY-------FSNGLPKEARQLFDEMS-----ERNVVSWN 83
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
++ K I E + V +L + + + +V+ Y G++ +A LF
Sbjct: 84 GLVSGYIKNRMIVEARN----VFELMPERNVVSWTAMVKGYMQEGMVGEAESLFW----- 134
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGY 246
RM E V W VM G + G I +RKL++ MP + VV+ MI G
Sbjct: 135 ------------RMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGL 182
Query: 247 AQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIE-- 303
+ G EA +F +M+ N +T +++ + +++ K + EK E+
Sbjct: 183 CREGRVDEARLIFDEMR----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWT 238
Query: 304 -----------IDD-------------VLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAI 339
I+D + +A+I + + G + KA +VF+ +E++ NA
Sbjct: 239 SMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA- 297
Query: 340 TWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
TW +I G +ALD + +MQ+ GV P+ I +LS C+ ++ GR + H+
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 400 VK 401
V+
Sbjct: 358 VR 359
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 13/188 (6%)
Query: 212 IDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNY 271
I R+G I +RK F+ + +++ SWN ++SGY NG KEA +F +M +V ++
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVV-SW 82
Query: 272 ITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK 331
LVS I +E L E+N + +A++ Y + G V +A +F +
Sbjct: 83 NGLVS--GYIKNRMIVEARNVFELMPERNVVS-----WTAMVKGYMQEGMVGEAESLFWR 135
Query: 332 IENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEE 391
+ ++N ++W+ + GGL GR + A Y M V V ++ G ++E
Sbjct: 136 MP-ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV----VASTNMIGGLCREGRVDE 190
Query: 392 GRSLFNHM 399
R +F+ M
Sbjct: 191 ARLIFDEM 198
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 10 ATRPTHPS--SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLK 67
RP+ PS S+ A S++ +Q+HAH ++ D A+ ++ +L
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCG--ELV 383
Query: 68 YARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPS 127
A+ F + ++ + WN+II +A + EAL F +M S G + PN+ T +
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGE-----EALKIFHEMPSSGTM-PNKVTLIA 437
Query: 128 VLKACAKMGRIQEGKEI 144
+L AC+ G+++EG EI
Sbjct: 438 ILTACSYAGKLEEGLEI 454
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/673 (33%), Positives = 342/673 (50%), Gaps = 65/673 (9%)
Query: 28 SIKQLKQIHAHFIKT-GLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNT 86
S++ + +HA +KT P A ++ S D + AR N SW +
Sbjct: 21 SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPE--SARLVLRLTPARNVVSWTS 78
Query: 87 IIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHG 146
+I A+ AL F +M EG+V PN FTFP KA A + GK+IH
Sbjct: 79 LISGLAQNGHFS-----TALVEFFEMRREGVV-PNDFTFPCAFKAVASLRLPVTGKQIHA 132
Query: 147 FVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS------------------------- 181
VK G D FV + MY + +DA LF
Sbjct: 133 LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPRE 192
Query: 182 ------------------NYVSHFDNNSTKLVRNKRMQ-EGVVV---------LWNVMID 213
+ + + S L N MQ G+V+ + N +ID
Sbjct: 193 AIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLID 252
Query: 214 GFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYIT 273
+ + I +S +F +M ++ VSW +++ Y QN ++A ++ + V +
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM 312
Query: 274 LVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE 333
+ SVL A + + LELG+ +H +A K +E +GSA++DMY KCG +E + Q F+++
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 334 NKKNAITWSAIIGGLAMHGRANDALDYYRKM--QQAGVTPTDVVYIGLLSACSHAGLIEE 391
+KN +T +++IGG A G+ + AL + +M + G TP + ++ LLSACS AG +E
Sbjct: 373 -EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVEN 431
Query: 392 GRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGAC 451
G +F+ M GIEP EHY C+VD + MPI+P +W AL AC
Sbjct: 432 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 491
Query: 452 KMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPG 511
+MHG ++G A L KL P DSG++V LSN FA+ G W VR ++K + ++K G
Sbjct: 492 RMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAG 551
Query: 512 CSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKES 571
SWI + +H F +D SH KEI++ L ++ N + +AGY+P++ L +++EE+K +
Sbjct: 552 YSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAA 611
Query: 572 ALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFH 631
+ +HSE++A+AFGL+S P+RI KNLR+C DCHS K +S KR+IIVRD RFH
Sbjct: 612 EVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFH 671
Query: 632 HFEKGVCSCMDYW 644
F+ G+CSC DYW
Sbjct: 672 RFKDGICSCKDYW 684
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/567 (35%), Positives = 301/567 (53%), Gaps = 53/567 (9%)
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
+W+ I +A+ EALG QM S G ++PN T SVL CA +G + GK
Sbjct: 332 TWSAAISGYAQRGLG-----YEALGVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGK 385
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQE 202
EIH + +K +D L +N E
Sbjct: 386 EIHCYAIKYPID---------------------------------------LRKNGHGDE 406
Query: 203 GVVVLWNVMIDGFVRLGDIGASRKLFNKMP--QRSVVSWNVMISGYAQNGFFKEAMDVFH 260
+V+ N +ID + + + +R +F+ + +R VV+W VMI GY+Q+G +A+++
Sbjct: 407 NMVI--NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 261 DMQMGDVS--PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIE-IDDVLGSAVIDMYA 317
+M D PN T+ L A + L AL +GK +H YA +N+ + + + +IDMYA
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYA 524
Query: 318 KCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYI 377
KCGS+ A VF+ + KN +TW++++ G MHG +AL + +M++ G V +
Sbjct: 525 KCGSISDARLVFDNMM-AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 378 GLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPI 437
+L ACSH+G+I++G FN M V G+ P EHY C+VD + MP+
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643
Query: 438 RPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEV 497
P V+W A L C++HG V++GE A + +L + GSY LSN++A+ G W V +
Sbjct: 644 EPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRI 703
Query: 498 RLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNI 557
R M+ V+K PGCSW+E F V D++HP AKEI +L + RI+ GY P
Sbjct: 704 RSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPET 763
Query: 558 TQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEI 617
L ++D+E+K+ L HSE++A+A+G+++T +RI KNLRVC DCH++ +S I
Sbjct: 764 GFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRI 823
Query: 618 YKRKIIVRDRKRFHHFEKGVCSCMDYW 644
II+RD RFHHF+ G CSC YW
Sbjct: 824 IDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 215/451 (47%), Gaps = 39/451 (8%)
Query: 19 LFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNN 78
+F S++ + HA + TG I + ++ S R L ARK F +M+
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRC--RSLSDARKVFDEMSV 190
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
+ SWN+II ++A+ P AL F +M +E P+ T +VL CA +G
Sbjct: 191 WDVVSWNSIIESYAKLG-----KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
GK++H F V + + FV + LV MYA CG+M++A +FSN
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSN---------------- 289
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFKE 254
M VV WN M+ G+ ++G + +LF KM + VV+W+ ISGYAQ G E
Sbjct: 290 -MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYE 348
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI-------DDV 307
A+ V M + PN +TL+SVL + +GAL GK +H YA K I++ +++
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENM 408
Query: 308 LGSAVIDMYAKCGSVEKAIQVFEKIENK-KNAITWSAIIGGLAMHGRANDALDYYRKM-- 364
+ + +IDMYAKC V+ A +F+ + K ++ +TW+ +IGG + HG AN AL+ +M
Sbjct: 409 VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 365 QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXX 424
+ P L AC+ + G+ + + ++ + C++D
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGS 528
Query: 425 XXXXXXXVLNMPIRPDDVIWKALLGACKMHG 455
NM + ++V W +L+ MHG
Sbjct: 529 ISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 215/502 (42%), Gaps = 102/502 (20%)
Query: 16 PSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSD-RRDLKYARKFFT 74
P P I +CK+I Q+K IH + G++ L + I ++SV + R+F
Sbjct: 28 PEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRF-- 85
Query: 75 QMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAK 134
++ + WN++IR++ D+ N + L FG M S P+ +TFP V KAC +
Sbjct: 86 PPSDAGVYHWNSLIRSYG---DNGCAN--KCLYLFGLMHSLSWT-PDNYTFPFVFKACGE 139
Query: 135 MGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKL 194
+ ++ G+ H + G ++ FV + LV MY+ C + DA +F
Sbjct: 140 ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFD------------- 186
Query: 195 VRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKE 254
M VV WN +I+ + +LG + ++F++M N F
Sbjct: 187 ----EMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM----------------TNEF--- 223
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
P+ ITLV+VLP + LG LGK +H +A +E+ + +G+ ++D
Sbjct: 224 -----------GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272
Query: 315 MYAKCGSV-------------------------------EKAIQVFEKIENKK---NAIT 340
MYAKCG + E A+++FEK++ +K + +T
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 341 WSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMV 400
WSA I G A G +AL R+M +G+ P +V I +LS C+ G + G+ + + +
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 401 KVVGIEPRVEHYG-------CMVDXXXXXXXXXXXXXXVLNM-PIRPDDVIWKALLGACK 452
K I+ R +G ++D ++ P D V W ++G
Sbjct: 393 K-YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 453 MHGNVKMGERVARTLMKLFPHD 474
HG+ + L ++F D
Sbjct: 452 QHGD---ANKALELLSEMFEED 470
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 137/309 (44%), Gaps = 15/309 (4%)
Query: 190 NSTKLVRNKRMQEGVVVL--WNVMIDGFVRLGDIGASRKLFNKMP--QRSVVSWNVMISG 245
+ KL+ K + G++ L + +I ++ +G + + L + P V WN +I
Sbjct: 42 SQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRS 101
Query: 246 YAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEID 305
Y NG + + +F M +P+ T V A + ++ G+ H + +
Sbjct: 102 YGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISN 161
Query: 306 DVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM- 364
+G+A++ MY++C S+ A +VF+++ + + ++W++II A G+ AL+ + +M
Sbjct: 162 VFVGNALVAMYSRCRSLSDARKVFDEM-SVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 365 QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXX 424
+ G P ++ + +L C+ G G+ L V I+ C+VD
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG-NCLVDMYAKCGM 279
Query: 425 XXXXXXXVLNMPIRPDDVIWKALLGACKMHGN----VKMGERVARTLMKLFPHDSGSYVA 480
NM ++ D V W A++ G V++ E++ +K+ D ++ A
Sbjct: 280 MDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM---DVVTWSA 335
Query: 481 LSNIFASRG 489
+ +A RG
Sbjct: 336 AISGYAQRG 344
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 299/524 (57%), Gaps = 25/524 (4%)
Query: 19 LFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNN 78
P + R KS + K+I+A I GL +++ F D+ YA + F Q++N
Sbjct: 13 FIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDF--CDKIEDMDYATRLFNQVSN 70
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
PN F +N+IIRA+ T + Y + + + Q+ + P+RFTFP + K+CA +G
Sbjct: 71 PNVFLYNSIIRAY--THNSLY---CDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSC 125
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
GK++HG + K G + L+ MY + DA+ +F
Sbjct: 126 YLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFD----------------- 168
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDV 258
M E V+ WN ++ G+ RLG + ++ LF+ M +++VSW MISGY G + EAMD
Sbjct: 169 EMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDF 228
Query: 259 FHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAK 318
F +MQ+ + P+ I+L+SVLP+ ++LG+LELGKW+HLYAE+ + +A+I+MY+K
Sbjct: 229 FREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSK 288
Query: 319 CGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIG 378
CG + +AIQ+F ++E K+ I+WS +I G A HG A+ A++ + +MQ+A V P + ++G
Sbjct: 289 CGVISQAIQLFGQMEG-KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLG 347
Query: 379 LLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIR 438
LLSACSH G+ +EG F+ M + IEP++EHYGC++D MP++
Sbjct: 348 LLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK 407
Query: 439 PDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVR 498
PD IW +LL +C+ GN+ + L++L P D G+YV L+NI+A G W V +R
Sbjct: 408 PDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLR 467
Query: 499 LKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLE 542
++ +++K PG S IE++ ++ EF+ D S P EI +L+
Sbjct: 468 KMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 209/642 (32%), Positives = 329/642 (51%), Gaps = 82/642 (12%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKT-----GLIGDPLAAAEILKFLSVSDRRDLKYARK 71
SSL + C SI+ + +H +K+ G IGD L + V A K
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVC-------AEK 87
Query: 72 FFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQ--------MCSEGLVEPNRF 123
F +M + SWN++I ++ G+ G+ M SE PN
Sbjct: 88 LFDEMPERDLVSWNSLISGYS------------GRGYLGKCFEVLSRMMISEVGFRPNEV 135
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
TF S++ AC G +EG+ IHG V+K G V+E+
Sbjct: 136 TFLSMISACVYGGSKEEGRCIHGLVMKFG-------------------VLEE-------- 168
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMI 243
V + N I+ + + GD+ +S KLF + +++VSWN MI
Sbjct: 169 ---------------------VKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 244 SGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIE 303
+ QNG ++ + F+ + P+ T ++VL + +G + L + +H
Sbjct: 208 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267
Query: 304 IDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRK 363
+ + +A++D+Y+K G +E + VF +I + +++ W+A++ A HG DA+ ++
Sbjct: 268 GNKCITTALLDLYSKLGRLEDSSTVFHEITSP-DSMAWTAMLAAYATHGFGRDAIKHFEL 326
Query: 364 MQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXX 423
M G++P V + LL+ACSH+GL+EEG+ F M K I+PR++HY CMVD
Sbjct: 327 MVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSG 386
Query: 424 XXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSN 483
+ MP+ P +W ALLGAC+++ + ++G + A L +L P D +YV LSN
Sbjct: 387 LLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSN 446
Query: 484 IFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEE 543
I+++ G W +R MK+ + + GCS+IE IH+F+V D SHP +++I+ L+E
Sbjct: 447 IYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKE 506
Query: 544 ISNRIRSA-GYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLR 602
I +++S GY+ VL ++ E+ KE ++ HSE+IA+AFGL+ P P+ I KNLR
Sbjct: 507 IRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLR 566
Query: 603 VCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+C DCH + K IS I KR+II+RD KRFHHF G CSC DYW
Sbjct: 567 ICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 358 bits (918), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 207/613 (33%), Positives = 313/613 (51%), Gaps = 58/613 (9%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
K +H +KT + DP +L+ + D+ A K F +M + W+ +I F
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYT--QLGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+ + + N EA+ F +M E V PN FT S+L CA G+++HG VVK+G
Sbjct: 325 Q---NGFCN--EAVDLFIRM-REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
D D +V+ N +I
Sbjct: 379 FDLDIYVS------------------------------------------------NALI 390
Query: 213 DGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
D + + + + KLF ++ ++ VSWN +I GY G +A +F + VS +
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV 450
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
T S L A + L +++LG VH A K + +++IDMYAKCG ++ A VF ++
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
E A +W+A+I G + HG AL M+ P + ++G+LS CS+AGLI++G
Sbjct: 511 ETIDVA-SWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQG 569
Query: 393 RSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACK 452
+ F M++ GIEP +EHY CMV + +P P +IW+A+L A
Sbjct: 570 QECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASM 629
Query: 453 MHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGC 512
N + R A ++K+ P D +YV +SN++A W V +R MKEM V+K+PG
Sbjct: 630 NQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGL 689
Query: 513 SWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESA 572
SWIE G +H F V HP K I MLE ++ + AGY P+ VLL+MD+E+K+
Sbjct: 690 SWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKR 749
Query: 573 LHYHSERIAIAFGLIST-RPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFH 631
L HSER+A+A+GL+ + + I+KNLR+C DCHS++K+IS I +R +++RD RFH
Sbjct: 750 LWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFH 809
Query: 632 HFEKGVCSCMDYW 644
HF GVCSC D+W
Sbjct: 810 HFHAGVCSCGDHW 822
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 156/370 (42%), Gaps = 61/370 (16%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
K IH +K G D L A IL V D K A F +M N S+ T+ + +A
Sbjct: 69 KAIHCDILKKGSCLD-LFATNILLNAYVKAGFD-KDALNLFDEMPERNNVSFVTLAQGYA 126
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
D +G + ++ EG E N F S LK + + + +H +VKLG
Sbjct: 127 CQD---------PIGLYSRLHREGH-ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLG 176
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
D++ FV + L+ Y++C
Sbjct: 177 YDSNAFVGAALINAYSVC------------------------------------------ 194
Query: 213 DGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
G + ++R +F + + +V W ++S Y +NG+F++++ + M+M PN
Sbjct: 195 ------GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNY 248
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
T + L A LGA + K VH K +D +G ++ +Y + G + A +VF ++
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
K + + WS +I +G N+A+D + +M++A V P + +L+ C+ G
Sbjct: 309 P-KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 393 RSLFNHMVKV 402
L +VKV
Sbjct: 368 EQLHGLVVKV 377
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQN---GFFKEAMDVFHDMQMG 265
N++++ +V+ G + LF++MP+R+ VS+ + GYA G + H++
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHEL--- 144
Query: 266 DVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKA 325
+P+ T S L L E+ W+H K + + +G+A+I+ Y+ CGSV+ A
Sbjct: 145 --NPHVFT--SFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSA 200
Query: 326 IQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSH 385
VFE I K+ + W+ I+ +G D+L M+ AG P + + L A
Sbjct: 201 RTVFEGILC-KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIG 259
Query: 386 AGLIEEGRSLFNHMVKVVGI-EPRV 409
G + + + ++K + +PRV
Sbjct: 260 LGAFDFAKGVHGQILKTCYVLDPRV 284
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 357 bits (916), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 218/688 (31%), Positives = 361/688 (52%), Gaps = 76/688 (11%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLA----AAEILKFLSVSDRRDLKYARKF 72
SS+ P +KQ + +H +K+G+ + A LKF +D AR+
Sbjct: 211 SSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD------ARRV 264
Query: 73 FTQMNNPNCFSWNTIIRAFAETD--DDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLK 130
F +M+ + S+NT+I + + + ++ + LE L F +P+ T SVL+
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF---------KPDLLTVSSVLR 315
Query: 131 ACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF---------- 180
AC + + K I+ +++K G + V + L+ +YA CG M A +F
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 181 -----SNYVSHFD---------------------------NNSTKL--------VRNKRM 200
S Y+ D + ST+L + + +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 201 QEGVVV---LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
+ G+ + + N +ID + + G++G S K+F+ M V+WN +IS + G F +
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYA 317
V M+ +V P+ T + LP + L A LGK +H + E + +G+A+I+MY+
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555
Query: 318 KCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYI 377
KCG +E + +VFE++ ++++ +TW+ +I M+G AL+ + M+++G+ P VV+I
Sbjct: 556 KCGCLENSSRVFERM-SRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFI 614
Query: 378 GLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPI 437
++ ACSH+GL++EG + F M I+P +EHY C+VD + MPI
Sbjct: 615 AIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPI 674
Query: 438 RPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEV 497
+PD IW ++L AC+ G+++ ERV+R +++L P D G + SN +A+ W V +
Sbjct: 675 KPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLI 734
Query: 498 RLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNI 557
R +K+ + K+PG SWIE+ +H F D+S P+++ I LE + + + GY P+
Sbjct: 735 RKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDP 794
Query: 558 TQVLLNM-DEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISE 616
+V N+ +EE+K + HSER+AIAFGL++T P TPL+++KNLRVC DCH KLIS+
Sbjct: 795 REVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISK 854
Query: 617 IYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
I R+I+VRD RFH F+ G CSC D W
Sbjct: 855 IVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 189/388 (48%), Gaps = 67/388 (17%)
Query: 21 PQIARCKS----IKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
P I+R S + +L++IHA I GL + +++ S R+ + F ++
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLID--KYSHFREPASSLSVFRRV 65
Query: 77 N-NPNCFSWNTIIRAFAETDDDDYKNPL--EALGFFGQMCSEGLVEPNRFTFPSVLKACA 133
+ N + WN+IIRAF+ KN L EAL F+G++ E V P+++TFPSV+KACA
Sbjct: 66 SPAKNVYLWNSIIRAFS-------KNGLFPEALEFYGKL-RESKVSPDKYTFPSVIKACA 117
Query: 134 KMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTK 193
+ + G ++ ++ +G ++D FV
Sbjct: 118 GLFDAEMGDLVYEQILDMGFESDLFVG--------------------------------- 144
Query: 194 LVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFK 253
N ++D + R+G + +R++F++MP R +VSWN +ISGY+ +G+++
Sbjct: 145 ---------------NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVI 313
EA++++H+++ + P+ T+ SVLPA L ++ G+ +H +A K+ + V+ + ++
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 314 DMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTD 373
MY K A +VF++++ + + + I G L + + + Q P
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDL 307
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+ +L AC H + + ++N+M+K
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 131/281 (46%), Gaps = 48/281 (17%)
Query: 121 NRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF 180
R + P + +A + + E + IH V+ LGLD+ +F + L+ Y
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKY------------- 49
Query: 181 SNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWN 240
SHF ++ L +R+ P ++V WN
Sbjct: 50 ----SHFREPASSLSVFRRVS------------------------------PAKNVYLWN 75
Query: 241 VMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKN 300
+I +++NG F EA++ + ++ VSP+ T SV+ A + L E+G V+
Sbjct: 76 SIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM 135
Query: 301 EIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDY 360
E D +G+A++DMY++ G + +A QVF+++ ++ ++W+++I G + HG +AL+
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMP-VRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 361 YRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
Y +++ + + P +L A + ++++G+ L +K
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 4/155 (2%)
Query: 302 IEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYY 361
++ D +ID Y+ ++ VF ++ KN W++II + +G +AL++Y
Sbjct: 35 LDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFY 94
Query: 362 RKMQQAGVTPTDVVYIGLLSACSHAGLIE-EGRSLFNHMVKVVGIEPRVEHYGCMVDXXX 420
K++++ V+P + ++ AC AGL + E L + +G E + +VD
Sbjct: 95 GKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYS 152
Query: 421 XXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHG 455
MP+R D V W +L+ HG
Sbjct: 153 RMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHG 186
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 270/438 (61%), Gaps = 7/438 (1%)
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM-QMGDV 267
N++I+ +++G+ G ++K+ ++V++WN+MI GY +N ++EA+ +M D+
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 268 SPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQ 327
PN + S L A +RLG L KWVH + IE++ +L SA++D+YAKCG + + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 328 VFEKIENKKNAIT-WSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
VF + K+N ++ W+A+I G A HG A +A+ + +M+ V+P + ++GLL+ CSH
Sbjct: 222 VFYSV--KRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 387 GLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKA 446
GL+EEG+ F M + I+P++EHYG MVD + +MPI PD VIW++
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 447 LLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDV 506
LL + + + N ++GE + L K SG YV LSNI++S W +VR M + +
Sbjct: 340 LLSSSRTYKNPELGEIAIQNLSKA---KSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Query: 507 RKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDE 566
RK G SW+E G+IH F D SH K I +LE + + +S G+ + VL+++ E
Sbjct: 397 RKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSE 456
Query: 567 EKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRD 626
E+KE L+YHSE++A+A+ ++ + P T +RI KN+R+C DCH+ IK +S++ R II+RD
Sbjct: 457 EEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRD 516
Query: 627 RKRFHHFEKGVCSCMDYW 644
R RFH FE G+CSC DYW
Sbjct: 517 RIRFHRFEDGLCSCRDYW 534
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 54/278 (19%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
A+K ++ N +WN +I + + Y+ L+AL M S ++PN+F+F S
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVR--NVQYEEALKALK---NMLSFTDIKPNKFSFASS 171
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD 188
L ACA++G + K +H ++ G++ + ++S LV +YA CG + + +F +
Sbjct: 172 LAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYS------ 225
Query: 189 NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
++ V +WN MI GF A
Sbjct: 226 -----------VKRNDVSIWNAMITGF-------------------------------AT 243
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGK-WVHLYAEKNEIEIDDV 307
+G EA+ VF +M+ VSP+ IT + +L S G LE GK + L + + I+
Sbjct: 244 HGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLE 303
Query: 308 LGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAII 345
A++D+ + G V++A ++ E + + + + W +++
Sbjct: 304 HYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/582 (34%), Positives = 317/582 (54%), Gaps = 38/582 (6%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
A + F ++ P+ FS+N ++ + N +A FF +M + N ++
Sbjct: 26 AHQLFDEIPEPDTFSYNIMLSCYVRN-----VNFEKAQSFFDRMPFKDAASWN-----TM 75
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD 188
+ A+ G +++ +E+ + ++ +E + ++ Y CG +E A SHF
Sbjct: 76 ITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKA--------SHFF 123
Query: 189 NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP-QRSVVSWNVMISGYA 247
+ VR VV W MI G+++ + + +F M +++V+WN MISGY
Sbjct: 124 KVAP--VRG-------VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYV 174
Query: 248 QNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV 307
+N ++ + +F M + PN L S L S L AL+LG+ +H K+ + D
Sbjct: 175 ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVT 234
Query: 308 LGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQA 367
+++I MY KCG + A ++FE + KK+ + W+A+I G A HG A+ AL +R+M
Sbjct: 235 ALTSLISMYCKCGELGDAWKLFE-VMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDN 293
Query: 368 GVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXX 427
+ P + ++ +L AC+HAGL+ G + F MV+ +EP+ +HY CMVD
Sbjct: 294 KIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEE 353
Query: 428 XXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFAS 487
+ +MP RP ++ LLGAC++H NV++ E A L++L ++ YV L+NI+AS
Sbjct: 354 ALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYAS 413
Query: 488 RGNWVGVVEVRLKMKEMDVRKD-----PGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLE 542
+ W V VR +MKE +V K PG SWIEI +H F D HP I L+
Sbjct: 414 KNRWEDVARVRKRMKESNVVKVERVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLK 473
Query: 543 EISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLR 602
E+ +++ AGY+P + L N++EE+KE L +HSE++A+AFG I + +++ KNLR
Sbjct: 474 ELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLR 533
Query: 603 VCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+C DCH +IK ISEI KR+IIVRD RFHHF+ G CSC DYW
Sbjct: 534 ICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 575
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 353 bits (905), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 205/621 (33%), Positives = 316/621 (50%), Gaps = 57/621 (9%)
Query: 24 ARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFS 83
AR ++ + K H I+ L GD ++ S +L AR+ F M + S
Sbjct: 64 ARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVEL--ARQVFDGMLERSLVS 121
Query: 84 WNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKE 143
WNT+I + + EAL F +M +EG + + FT SVL AC E K+
Sbjct: 122 WNTMIGLYTRNRMES-----EALDIFLEMRNEGF-KFSEFTISSVLSACGVNCDALECKK 175
Query: 144 IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEG 203
+H VK +D + +V + L
Sbjct: 176 LHCLSVKTCIDLNLYVGTAL---------------------------------------- 195
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQ 263
+D + + G I + ++F M +S V+W+ M++GY QN ++EA+ ++ Q
Sbjct: 196 --------LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ 247
Query: 264 MGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
+ N TL SV+ A S L AL GK +H K+ + + S+ +DMYAKCGS+
Sbjct: 248 RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLR 307
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC 383
++ +F +++ +KN W+ II G A H R + + + KMQQ G+ P +V + LLS C
Sbjct: 308 ESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 366
Query: 384 SHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVI 443
H GL+EEGR F M G+ P V HY CMVD + ++P P I
Sbjct: 367 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI 426
Query: 444 WKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKE 503
W +LL +C+++ N+++ E A L +L P ++G++V LSNI+A+ W + + R +++
Sbjct: 427 WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 486
Query: 504 MDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLN 563
DV+K G SWI+I +H F V + HPR +EI S L+ + + R GY+P++ L +
Sbjct: 487 CDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHD 546
Query: 564 MDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKII 623
++ KKE L HSE++A+ FGL+ +P+RI+KNLR+C DCH +K S +R II
Sbjct: 547 VEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFII 606
Query: 624 VRDRKRFHHFEKGVCSCMDYW 644
VRD RFHHF G CSC D+W
Sbjct: 607 VRDVNRFHHFSDGHCSCGDFW 627
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 277 VLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK 336
+L +R GA+ K H + ++E D L + +I+ Y+KCG VE A QVF+ + ++
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML-ER 117
Query: 337 NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC 383
+ ++W+ +IG + ++ALD + +M+ G ++ +LSAC
Sbjct: 118 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 164
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 192/523 (36%), Positives = 299/523 (57%), Gaps = 33/523 (6%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
Q+H+ K+ + D + ++ S ++ A++ F +M + N SWN++I F +
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCG--NVNDAQRVFDEMGDRNVVSWNSLITCFEQ 230
Query: 94 TDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG- 152
+EAL F QM E VEP+ T SV+ ACA + I+ G+E+HG VVK
Sbjct: 231 NGP-----AVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK 284
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
L ND +++ V MYA C +++A +F + +RN V+ MI
Sbjct: 285 LRNDIILSNAFVDMYAKCSRIKEARFIFD----------SMPIRN-------VIAETSMI 327
Query: 213 DGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
G+ A+R +F KM +R+VVSWN +I+GY QNG +EA+ +F ++ V P +
Sbjct: 328 SGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHY 387
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEI-----EIDDV-LGSAVIDMYAKCGSVEKAI 326
+ ++L A + L L LG H++ K+ E DD+ +G+++IDMY KCG VE+
Sbjct: 388 SFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY 447
Query: 327 QVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
VF K+ +++ ++W+A+I G A +G N+AL+ +R+M ++G P + IG+LSAC HA
Sbjct: 448 LVFRKMM-ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHA 506
Query: 387 GLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKA 446
G +EEGR F+ M + G+ P +HY CMVD + MP++PD VIW +
Sbjct: 507 GFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGS 566
Query: 447 LLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDV 506
LL ACK+H N+ +G+ VA L+++ P +SG YV LSN++A G W V+ VR M++ V
Sbjct: 567 LLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGV 626
Query: 507 RKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR 549
K PGCSWI+I G H F+V+D+SHPR K+I S+L+ + +R
Sbjct: 627 TKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 146/279 (52%), Gaps = 21/279 (7%)
Query: 125 FPSVLKAC--AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSN 182
F +L +C +K+ I + +H V+K G N+ F+ + L+ Y+ CG +ED +F
Sbjct: 22 FAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD- 79
Query: 183 YVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVM 242
+M + + WN ++ G +LG + + LF MP+R +WN M
Sbjct: 80 ----------------KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123
Query: 243 ISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEI 302
+SG+AQ+ +EA+ F M N + SVL A S L + G VH K+
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPF 183
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYR 362
D +GSA++DMY+KCG+V A +VF+++ + +N ++W+++I +G A +ALD ++
Sbjct: 184 LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD-RNVVSWNSLITCFEQNGPAVEALDVFQ 242
Query: 363 KMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
M ++ V P +V ++SAC+ I+ G+ + +VK
Sbjct: 243 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 344 bits (883), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 196/603 (32%), Positives = 318/603 (52%), Gaps = 63/603 (10%)
Query: 47 DPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFS---WNTIIRAFAETDDDDYKNPL 103
+P ++++ SV R DL ARK F + + + + W + ++ +P
Sbjct: 166 NPKLLSKLITLFSVCRRLDL--ARKIFDDVTDSSLLTEKVWAAMAIGYSRNG-----SPR 218
Query: 104 EALGFFGQM-CSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASN 162
+AL + M CS +EP F+ LKAC + ++ G+ IH +VK
Sbjct: 219 DALIVYVDMLCS--FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVK------------ 264
Query: 163 LVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIG 222
R +++ + V++NV++ ++ G
Sbjct: 265 ---------------------------------RKEKVDQ---VVYNVLLKLYMESGLFD 288
Query: 223 ASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAIS 282
+RK+F+ M +R+VV+WN +IS ++ E ++F MQ + ++ TL ++LPA S
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACS 348
Query: 283 RLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWS 342
R+ AL GK +H K++ + D L ++++DMY KCG VE + +VF+ + K A +W+
Sbjct: 349 RVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLA-SWN 407
Query: 343 AIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV 402
++ A++G + ++ + M ++GV P + ++ LLS CS GL E G SLF M
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTE 467
Query: 403 VGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGER 462
+ P +EHY C+VD + MP +P IW +LL +C++HGNV +GE
Sbjct: 468 FRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEI 527
Query: 463 VARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIH 522
A+ L L PH+ G+YV +SNI+A W V ++R MK+ V+K+ GCSW+++ I
Sbjct: 528 AAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQ 587
Query: 523 EFLVEDESHPR-AKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIA 581
F+ R + E + + E+ I +GY PN + VL ++DEE K + + HSER+A
Sbjct: 588 IFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLA 647
Query: 582 IAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCM 641
+ LI T P+RI KNLRVC DCHS +K++S++ +R I++RD KRFHHF G+CSC
Sbjct: 648 TTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCK 707
Query: 642 DYW 644
DYW
Sbjct: 708 DYW 710
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 133/272 (48%), Gaps = 13/272 (4%)
Query: 190 NSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVS---WNVMISGY 246
N+ L N ++ ++ L++V R D+ +RK+F+ + S+++ W M GY
Sbjct: 159 NNPSLRHNPKLLSKLITLFSV-----CRRLDL--ARKIFDDVTDSSLLTEKVWAAMAIGY 211
Query: 247 AQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD 306
++NG ++A+ V+ DM + P ++ L A L L +G+ +H K + ++D
Sbjct: 212 SRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQ 271
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQ 366
V+ + ++ +Y + G + A +VF+ + +++N +TW+++I L+ R ++ + +RKMQ+
Sbjct: 272 VVYNVLLKLYMESGLFDDARKVFDGM-SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE 330
Query: 367 AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXX 426
+ + +L ACS + G+ + ++K +P V ++D
Sbjct: 331 EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE-KPDVPLLNSLMD-MYGKCGEV 388
Query: 427 XXXXXVLNMPIRPDDVIWKALLGACKMHGNVK 458
V ++ + D W +L ++GN++
Sbjct: 389 EYSRRVFDVMLTKDLASWNIMLNCYAINGNIE 420
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/526 (36%), Positives = 307/526 (58%), Gaps = 27/526 (5%)
Query: 28 SIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTI 87
++K LKQ H + I TGL D L A+ ++ + S+ L+YA FT PN + NT+
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIE--ACSNAGHLRYAYSVFTHQPCPNTYLHNTM 84
Query: 88 IRAFAETDDDD-YKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHG 146
IRA + D+ + + + +C++ P+ FTFP VLK ++ + G++IHG
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAK----PDTFTFPFVLKIAVRVSDVWFGRQIHG 140
Query: 147 FVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVV 206
VV G D+ V + L++MY CG + DA +F LV++ V
Sbjct: 141 QVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM----------LVKD-------VN 183
Query: 207 LWNVMIDGFVRLGDIGASRKLFNKMP--QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
+WN ++ G+ ++G++ +R L MP R+ VSW +ISGYA++G EA++VF M M
Sbjct: 184 VWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLM 243
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEK 324
+V P+ +TL++VL A + LG+LELG+ + Y + + L +AVIDMYAK G++ K
Sbjct: 244 ENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITK 303
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS 384
A+ VFE + N++N +TW+ II GLA HG +AL + +M +AGV P DV +I +LSACS
Sbjct: 304 ALDVFECV-NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACS 362
Query: 385 HAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIW 444
H G ++ G+ LFN M GI P +EHYGCM+D + +MP + + IW
Sbjct: 363 HVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIW 422
Query: 445 KALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEM 504
+LL A +H ++++GER L+KL P++SG+Y+ L+N++++ G W +R MK +
Sbjct: 423 GSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGI 482
Query: 505 DVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRS 550
V+K G S IE++ +++F+ D +HP+ + I +L+E+ +I+S
Sbjct: 483 GVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQS 528
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 342 bits (876), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 283/487 (58%), Gaps = 24/487 (4%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
D++ ARK F + + SWN +I + + + + +A+ + M SEG V+P+ T
Sbjct: 206 DMENARKVFDESPVRDLVSWNCLINGYKKIGEAE-----KAIYVYKLMESEG-VKPDDVT 259
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
++ +C+ +G + GKE + +V + GL + + L+ M++ CG + +A +F N
Sbjct: 260 MIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN-- 317
Query: 185 SHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMIS 244
+++ +V W MI G+ R G + SRKLF+ M ++ VV WN MI
Sbjct: 318 ---------------LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIG 362
Query: 245 GYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI 304
G Q ++A+ +F +MQ + P+ IT++ L A S+LGAL++G W+H Y EK + +
Sbjct: 363 GSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSL 422
Query: 305 DDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM 364
+ LG++++DMYAKCG++ +A+ VF I+ +N++T++AIIGGLA+HG A+ A+ Y+ +M
Sbjct: 423 NVALGTSLVDMYAKCGNISEALSVFHGIQT-RNSLTYTAIIGGLALHGDASTAISYFNEM 481
Query: 365 QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXX 424
AG+ P ++ +IGLLSAC H G+I+ GR F+ M + P+++HY MVD
Sbjct: 482 IDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGL 541
Query: 425 XXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNI 484
+ +MP+ D +W ALL C+MHGNV++GE+ A+ L++L P DSG YV L +
Sbjct: 542 LEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGM 601
Query: 485 FASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEI 544
+ W R M E V K PGCS IE++G++ EF+V D+S P +++I L +
Sbjct: 602 YGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCL 661
Query: 545 SNRIRSA 551
+RS+
Sbjct: 662 GRHMRSS 668
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 193/406 (47%), Gaps = 85/406 (20%)
Query: 19 LFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNN 78
L + +CK + LKQI A I GLI DP A++ ++ F ++S+ R L Y+ K + N
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVE--PNRFTFPSVLKACAKMG 136
PN FSWN IR F+E++ NP E+ + QM G E P+ FT+P + K CA +
Sbjct: 116 PNIFSWNVTIRGFSESE-----NPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLR 170
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVR 196
G I G V+KL L+ VSH N S +
Sbjct: 171 LSSLGHMILGHVLKLRLE----------------------------LVSHVHNASIHM-- 200
Query: 197 NKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAM 256
F GD+ +RK+F++ P R +VSWN +I+GY + G ++A+
Sbjct: 201 ------------------FASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAI 242
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
V+ M+ V P+ +T++ ++ + S LG L GK + Y ++N + + L +A++DM+
Sbjct: 243 YVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMF 302
Query: 317 AKCGSVEKAIQVFEKIENK------------------------------KNAITWSAIIG 346
+KCG + +A ++F+ +E + K+ + W+A+IG
Sbjct: 303 SKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIG 362
Query: 347 GLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
G R DAL +++MQ + P ++ I LSACS G ++ G
Sbjct: 363 GSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/545 (34%), Positives = 300/545 (55%), Gaps = 31/545 (5%)
Query: 6 EPTTAT-RPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRR 64
+P + T R + +L + CK+I + IHA I+T D E+++ S D
Sbjct: 64 DPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSV 123
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
D YA F+ ++NPN + + +I F + + + + +M ++ P+ +
Sbjct: 124 D--YAYDVFSYVSNPNVYLYTAMIDGFVSSG-----RSADGVSLYHRMIHNSVL-PDNYV 175
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
SVLKAC ++ +EIH V+KLG + V ++ +Y G + +A +F
Sbjct: 176 ITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFD--- 228
Query: 185 SHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMIS 244
M + V VMI+ + G I + +LF + + V W MI
Sbjct: 229 --------------EMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMID 274
Query: 245 GYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI 304
G +N +A+++F +MQM +VS N T V VL A S LGALELG+WVH + E +E+
Sbjct: 275 GLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMEL 334
Query: 305 DDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM 364
+ +G+A+I+MY++CG + +A +VF ++ K+ I+++ +I GLAMHG + +A++ +R M
Sbjct: 335 SNFVGNALINMYSRCGDINEARRVF-RVMRDKDVISYNTMISGLAMHGASVEAINEFRDM 393
Query: 365 QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXX 424
G P V + LL+ACSH GL++ G +FN M +V +EP++EHYGC+VD
Sbjct: 394 VNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGR 453
Query: 425 XXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNI 484
+ N+PI PD ++ LL ACK+HGN+++GE++A+ L + DSG+YV LSN+
Sbjct: 454 LEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNL 513
Query: 485 FASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEI 544
+AS G W E+R M++ + K+PGCS IE+D IHEFLV D +HP + I L+E+
Sbjct: 514 YASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 573
Query: 545 SNRIR 549
+ +R
Sbjct: 574 NRILR 578
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 182/513 (35%), Positives = 294/513 (57%), Gaps = 27/513 (5%)
Query: 14 THPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVS-DRRDLKYARKF 72
+ P + R KS+ +++Q HA +KTGL D +A++++ F + + + + + YA
Sbjct: 37 STPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSI 96
Query: 73 FTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
++ +PN F+ N++IRA+A + P AL F +M G V P++++F VLKAC
Sbjct: 97 LNRIGSPNGFTHNSVIRAYANS-----STPEVALTVFREMLL-GPVFPDKYSFTFVLKAC 150
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY--------------- 177
A +EG++IHG +K GL D FV + LV +Y G E A
Sbjct: 151 AAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWN 210
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV 237
L S Y+ + + + ++ M+E V WN MI G+ G + ++++F+ MP R VV
Sbjct: 211 SLLSAYLEKGLVDEARALFDE-MEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVV 269
Query: 238 SWNVMISGYAQNGFFKEAMDVFHDMQMGDVS--PNYITLVSVLPAISRLGALELGKWVHL 295
SWN M++ YA G + E ++VF+ M + D + P+ TLVSVL A + LG+L G+WVH+
Sbjct: 270 SWNAMVTAYAHVGCYNEVLEVFNKM-LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAN 355
Y +K+ IEI+ L +A++DMY+KCG ++KA++VF + +K++ TW++II L++HG
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF-RATSKRDVSTWNSIISDLSVHGLGK 387
Query: 356 DALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCM 415
DAL+ + +M G P + +IG+LSAC+H G++++ R LF M V +EP +EHYGCM
Sbjct: 388 DALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCM 447
Query: 416 VDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDS 475
VD V +P ++ ++LLGACK G ++ ER+A L++L DS
Sbjct: 448 VDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDS 507
Query: 476 GSYVALSNIFASRGNWVGVVEVRLKMKEMDVRK 508
Y +SN++AS G W V++ R M+ V +
Sbjct: 508 SGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 338 bits (866), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 316/627 (50%), Gaps = 60/627 (9%)
Query: 24 ARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNN-PNCF 82
A C + +KQ+H + G D ++ S L+ A F M+ +
Sbjct: 149 ACCDRVDLIKQLHCFSVSGGF--DSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV 206
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
SWN++I A+ + +K +AL + +M +G + + FT SVL A + + G+
Sbjct: 207 SWNSMIVAYGQ-----HKEGAKALALYKEMIFKGF-KIDMFTLASVLNALTSLDHLIGGR 260
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQE 202
+ HG ++K G + V S L+ Y+ CG + Y
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY------------------------- 295
Query: 203 GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNG-FFKEAMDVFHD 261
S K+F ++ +V WN MISGY+ N +EA+ F
Sbjct: 296 --------------------DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQ 335
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV-LGSAVIDMYAKCG 320
MQ P+ + V V A S L + K +H A K+ I + + + +A+I +Y K G
Sbjct: 336 MQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSG 395
Query: 321 SVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLL 380
+++ A VF+++ + NA++++ +I G A HG +AL Y++M +G+ P + ++ +L
Sbjct: 396 NLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVL 454
Query: 381 SACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPD 440
SAC+H G ++EG+ FN M + IEP EHY CM+D + MP +P
Sbjct: 455 SACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPG 514
Query: 441 DVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLK 500
V W ALLGAC+ H N+ + ER A LM + P + YV L+N++A W + VR
Sbjct: 515 SVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKS 574
Query: 501 MKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQV 560
M+ +RK PGCSWIE+ H F+ ED SHP +E+ LEE+ +++ GY +
Sbjct: 575 MRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWA 634
Query: 561 LLNMDEEKKESA---LHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEI 617
++ DE + L +HSE++A+AFGL+STR L +VKNLR+C DCH++IK +S +
Sbjct: 635 MVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAV 694
Query: 618 YKRKIIVRDRKRFHHFEKGVCSCMDYW 644
R+IIVRD RFH F+ G CSC DYW
Sbjct: 695 AGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 203/484 (41%), Gaps = 79/484 (16%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
K +HA ++K+ + + + S R L YAR F PN FS+N I++A+A
Sbjct: 28 KSLHALYVKSIVASSTYLSNHFVNLYSKCGR--LSYARAAFYSTEEPNVFSYNVIVKAYA 85
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+ D K + F + + +P+ ++ +++ A + + KLG
Sbjct: 86 K----DSKIHIARQLF------DEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLG 135
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH-FDNNSTKLVRNKRMQEGVVVLWNVM 211
+ D F S L+ A C ++ L VS FD+ S+ + N
Sbjct: 136 FEVDGFTLSGLIA--ACCDRVDLIKQLHCFSVSGGFDSYSS--------------VNNAF 179
Query: 212 IDGFVRLGDIGASRKLFNKMPQ-RSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPN 270
+ + + G + + +F M + R VSWN MI Y Q+ +A+ ++ +M +
Sbjct: 180 VTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKID 239
Query: 271 YITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE---KAIQ 327
TL SVL A++ L L G+ H K + +GS +ID Y+KCG + + +
Sbjct: 240 MFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEK 299
Query: 328 VFEKIENKKNAITWSAIIGGLAMHGR-ANDALDYYRKMQQAGVTPTDVVYIGLLSACSH- 385
VF++I + + + W+ +I G +M+ + +A+ +R+MQ+ G P D ++ + SACS+
Sbjct: 300 VFQEILS-PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Query: 386 -----------------------------------AGLIEEGRSLFNHMVKVVGIEPRVE 410
+G +++ R +F+ M ++ +
Sbjct: 359 SSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS---- 414
Query: 411 HYGCMVDXXXXX---XXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTL 467
+ CM+ +L+ I P+ + + A+L AC G V G+ T+
Sbjct: 415 -FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTM 473
Query: 468 MKLF 471
+ F
Sbjct: 474 KETF 477
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 149/354 (42%), Gaps = 25/354 (7%)
Query: 120 PNRF-TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYL 178
P +F TF +L + GK +H VK + + +++++ V +Y+ CG + A
Sbjct: 5 PWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARA 64
Query: 179 LFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVS 238
F + +E V +NV++ + + I +R+LF+++PQ VS
Sbjct: 65 AFYS-----------------TEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVS 107
Query: 239 WNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAE 298
+N +ISGYA AM +F M+ + TL ++ A ++L K +H ++
Sbjct: 108 YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSV 165
Query: 299 KNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDAL 358
+ + +A + Y+K G + +A+ VF ++ ++ ++W+++I H AL
Sbjct: 166 SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKAL 225
Query: 359 DYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDX 418
Y++M G +L+A + + GR ++K G ++D
Sbjct: 226 ALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIK-AGFHQNSHVGSGLIDF 284
Query: 419 XXX--XXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKL 470
V + PD V+W ++ M N ++ E ++ ++
Sbjct: 285 YSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM--NEELSEEAVKSFRQM 336
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/562 (32%), Positives = 305/562 (54%), Gaps = 26/562 (4%)
Query: 1 MNLICEPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSV 60
+N++ E T T P L ++ K++H H +K GL + ++K S+
Sbjct: 123 LNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSL 182
Query: 61 SDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEP 120
D+ AR F + + FSWN +I + + Y+ +E L LV P
Sbjct: 183 CGLMDM--ARGVFDRRCKEDVFSWNLMISGYNRMKE--YEESIELL----VEMERNLVSP 234
Query: 121 NRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF 180
T VL AC+K+ K +H +V + + + + LV YA CG M+ A +F
Sbjct: 235 TSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIF 294
Query: 181 SNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWN 240
+ M+ V+ W ++ G+V G++ +R F++MP R +SW
Sbjct: 295 -----------------RSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 241 VMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKN 300
+MI GY + G F E++++F +MQ + P+ T+VSVL A + LG+LE+G+W+ Y +KN
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN 397
Query: 301 EIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDY 360
+I+ D V+G+A+IDMY KCG EKA +VF ++ +++ TW+A++ GLA +G+ +A+
Sbjct: 398 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEAIKV 456
Query: 361 YRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXX 420
+ +MQ + P D+ Y+G+LSAC+H+G++++ R F M IEP + HYGCMVD
Sbjct: 457 FFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLG 516
Query: 421 XXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVA 480
+ MP+ P+ ++W ALLGA ++H + M E A+ +++L P + Y
Sbjct: 517 RAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYAL 576
Query: 481 LSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSM 540
L NI+A W + EVR K+ ++ ++K PG S IE++G HEF+ D+SH +++EI
Sbjct: 577 LCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMK 636
Query: 541 LEEISNRIRSAGYRPNITQVLL 562
LEE++ A Y P+ +++L
Sbjct: 637 LEELAQESTFAAYLPDTSELLF 658
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 317/616 (51%), Gaps = 59/616 (9%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
QIH +K G ++ S R + A K F ++ + + SWN +I F
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGR--INEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 94 TDDDDYKNPLEALGFFGQMCSEGLVE-PNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+AL FG M + E P+ FT S+LKAC+ G I GK+IHGF+V+ G
Sbjct: 186 AGYGS-----KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
H +++T + ++
Sbjct: 241 F--------------------------------HCPSSAT--------------ITGSLV 254
Query: 213 DGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
D +V+ G + ++RK F+++ +++++SW+ +I GYAQ G F EAM +F +Q + +
Sbjct: 255 DLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSF 314
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
L S++ + L GK + A K ++ + ++V+DMY KCG V++A + F ++
Sbjct: 315 ALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEM 374
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
+ K+ I+W+ +I G HG ++ + +M + + P +V Y+ +LSACSH+G+I+EG
Sbjct: 375 Q-LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEG 433
Query: 393 RSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACK 452
LF+ +++ GI+PRVEHY C+VD + MPI+P+ IW+ LL C+
Sbjct: 434 EELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCR 493
Query: 453 MHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGC 512
+HG++++G+ V + L+++ + +YV +SN++ G W R ++K+ G
Sbjct: 494 VHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGM 553
Query: 513 SWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSA-GYRPNITQVLLNMDEEKKES 571
SW+EI+ +H F ++SHP I+ L+E R+R GY + L ++D+E KE
Sbjct: 554 SWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEE 613
Query: 572 ALHYHSERIAIAFGLIS---TRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRK 628
L HSE++AI L + + +R+ KNLRVC DCH IK +S+I K +VRD
Sbjct: 614 NLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAV 673
Query: 629 RFHHFEKGVCSCMDYW 644
RFH FE G CSC DYW
Sbjct: 674 RFHSFEDGCCSCGDYW 689
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 199/476 (41%), Gaps = 94/476 (19%)
Query: 31 QLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRA 90
Q Q+H + +K+G G L + L + R L A K F M N SW+ ++
Sbjct: 24 QGGQVHCYLLKSG-SGLNLITSNYLIDMYCKCREPL-MAYKVFDSMPERNVVSWSALMSG 81
Query: 91 FAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVK 150
+ D K +L F +M +G + PN FTF + LKAC + +++G +IHGF +K
Sbjct: 82 --HVLNGDLKG---SLSLFSEMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLK 135
Query: 151 LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNV 210
+G + V ++LV MY+ CG + +A +F +R+ + ++ WN
Sbjct: 136 IGFEMMVEVGNSLVDMYSKCGRINEAEKVF-----------------RRIVDRSLISWNA 178
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS-- 268
MI GFV G+ +A+D F MQ ++
Sbjct: 179 MIAGFV-------------------------------HAGYGSKALDTFGMMQEANIKER 207
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD--VLGSAVIDMYAKCGSVEKAI 326
P+ TL S+L A S G + GK +H + ++ + +++D+Y KCG + A
Sbjct: 208 PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSAR 267
Query: 327 QVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
+ F++I+ +K I+WS++I G A G +A+ ++++Q+ ++ +
Sbjct: 268 KAFDQIK-EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326
Query: 387 GLIEEGRSLFNHMVKV-VGIEPRV---------------EHYGCMVDXXXX--------- 421
L+ +G+ + VK+ G+E V E C +
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVI 386
Query: 422 --------XXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMK 469
+L I PD+V + A+L AC G +K GE + L++
Sbjct: 387 TGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
LVS+L +R G + G VH Y K+ ++ + + +IDMY KC A +VF+ +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
++N ++WSA++ G ++G +L + +M + G+ P + + L AC +E+G
Sbjct: 68 P-ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 393 RSLFNHMVKVVGIEPRVEHYGCMVD 417
+ +K +G E VE +VD
Sbjct: 127 LQIHGFCLK-IGFEMMVEVGNSLVD 150
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 199/636 (31%), Positives = 314/636 (49%), Gaps = 73/636 (11%)
Query: 16 PSSLFPQIARC----KSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARK 71
PSS++ + + +++ +QIHAH I+ GL + I+ L A++
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW--LVGAKR 240
Query: 72 FFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKA 131
F QM + ++ + + +AL F + +EG VE + F F VLKA
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAG-----RARDALKLFVDLVTEG-VEWDSFVFSVVLKA 294
Query: 132 CAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNS 191
CA + + GK+IH V KLGL+++ V + L
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVSVGTPL---------------------------- 326
Query: 192 TKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
+D +++ ++ + F ++ + + VSW+ +ISGY Q
Sbjct: 327 --------------------VDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQ 366
Query: 252 FKEAMDVFHDMQMGDVS-PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGS 310
F+EA+ F ++ + S N T S+ A S L +G VH A K + S
Sbjct: 367 FEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES 426
Query: 311 AVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
A+I MY+KCG ++ A +VFE ++N + + W+A I G A +G A++AL + KM G+
Sbjct: 427 ALITMYSKCGCLDDANEVFESMDNP-DIVAWTAFISGHAYYGNASEALRLFEKMVSCGMK 485
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXX 430
P V +I +L+ACSHAGL+E+G+ + M++ + P ++HY CM+D
Sbjct: 486 PNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALK 545
Query: 431 XVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGN 490
+ NMP PD + WK L C H N+++GE L +L P D+ YV N++ G
Sbjct: 546 FMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGK 605
Query: 491 WVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRS 550
W E+ M E ++K+ CSWI+ G IH F+V D+ HP+ +EI L+E +
Sbjct: 606 WEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEG 665
Query: 551 AGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTR--PQTPLRIVKNLRVCEDCH 608
++ N+T E++E L HSER+AIAFGLIS P+++ KNLR C DCH
Sbjct: 666 DMFQCNMT--------ERREQLLD-HSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCH 716
Query: 609 SSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
K +S + +I++RD +RFHHF++G CSC DYW
Sbjct: 717 EFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 166/412 (40%), Gaps = 80/412 (19%)
Query: 64 RDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRF 123
R L+ A K F +M+ N S T+I A+AE D +A+G F M + G P+
Sbjct: 132 RSLEDADKLFDEMSELNAVSRTTMISAYAEQGILD-----KAVGLFSGMLASGDKPPSSM 186
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
+ ++LK+ + G++IH V++ GL ++ + + +V M
Sbjct: 187 -YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNM----------------- 228
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMI 243
+V+ G + ++++F++M + V+ ++
Sbjct: 229 -------------------------------YVKCGWLVGAKRVFDQMAVKKPVACTGLM 257
Query: 244 SGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIE 303
GY Q G ++A+ +F D+ V + VL A + L L LGK +H K +E
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE 317
Query: 304 IDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRK 363
+ +G+ ++D Y KC S E A + F++I + N ++WSAII G + +A+ ++
Sbjct: 318 SEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWSAIISGYCQMSQFEEAVKTFKS 376
Query: 364 MQQAGVTPTD-VVYIGLLSACS-----------HAGLIEEGRSLFNHMVKVVGIEPRVEH 411
++ + + Y + ACS HA I+ RSL +
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK--RSLIGSQYGESALITMYSK 434
Query: 412 YGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERV 463
GC+ D V PD V W A + +GN R+
Sbjct: 435 CGCLDD-----------ANEVFESMDNPDIVAWTAFISGHAYYGNASEALRL 475
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 299/520 (57%), Gaps = 31/520 (5%)
Query: 32 LKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAF 91
+KQ+HAH ++TG+ ++L+ L + +L YARK F N F +N +I+A+
Sbjct: 4 IKQLHAHCLRTGVD----ETKDLLQRLLLIP--NLVYARKLFDHHQNSCTFLYNKLIQAY 57
Query: 92 AETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
+ P E++ + + +GL P+ TF + A A + + +H +
Sbjct: 58 YV-----HHQPHESIVLYNLLSFDGL-RPSHHTFNFIFAASASFSSARPLRLLHSQFFRS 111
Query: 152 GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVM 211
G ++D F + L+ YA G + A +F M + V +WN M
Sbjct: 112 GFESDSFCCTTLITAYAKLGALCCARRVFD-----------------EMSKRDVPVWNAM 154
Query: 212 IDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMG-DVSPN 270
I G+ R GD+ A+ +LF+ MP+++V SW +ISG++QNG + EA+ +F M+ V PN
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 271 YITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFE 330
+IT+VSVLPA + LG LE+G+ + YA +N + + +A I+MY+KCG ++ A ++FE
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 331 KIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIE 390
++ N++N +W+++IG LA HG+ ++AL + +M + G P V ++GLL AC H G++
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVV 334
Query: 391 EGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGA 450
+G+ LF M +V I P++EHYGCM+D + MP++PD V+W LLGA
Sbjct: 335 KGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Query: 451 CKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDP 510
C HGNV++ E + L KL P + G+ V +SNI+A+ W GV+ +R MK+ + K
Sbjct: 395 CSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAA 454
Query: 511 GCSW-IEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR 549
G S+ +E+ +H+F VED+SHPR+ EI +LEEI R++
Sbjct: 455 GYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 332 bits (850), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 286/542 (52%), Gaps = 54/542 (9%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
EA+ F M E V+PN +T+ SVL +C + I GK IHG +VK G ++ ++L
Sbjct: 250 EAVKAFQSMLVEK-VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSL 308
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGA 223
+ MY C +++D
Sbjct: 309 LTMYLRCSLVDD------------------------------------------------ 320
Query: 224 SRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISR 283
S ++F + + VSW +ISG QNG + A+ F M + PN TL S L S
Sbjct: 321 SLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSN 380
Query: 284 LGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSA 343
L E G+ +H K + D GS +ID+Y KCG + A VF+ + ++ + I+ +
Sbjct: 381 LAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTL-SEVDVISLNT 439
Query: 344 IIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVV 403
+I A +G +ALD + +M G+ P DV + +L AC+++ L+EEG LF+ K
Sbjct: 440 MIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD- 498
Query: 404 GIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERV 463
I +HY CMVD + I PD V+W+ LL ACK+H V+M ER+
Sbjct: 499 KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERI 557
Query: 464 ARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHE 523
R ++++ P D G+ + +SN++AS G W V+E++ KMK+M ++K+P SW+EI+ H
Sbjct: 558 TRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHT 617
Query: 524 FLVEDE-SHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAI 582
F+ D SHP +++I LEE+ + + GY + + V +M+E KE +LH HSE++AI
Sbjct: 618 FMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAI 677
Query: 583 AFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMD 642
AF + +RI+KNLRVC DCHS IK++S + KR+II RD KRFHHF G CSC D
Sbjct: 678 AFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGD 736
Query: 643 YW 644
YW
Sbjct: 737 YW 738
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 174/401 (43%), Gaps = 60/401 (14%)
Query: 3 LICEPTTATRPTHP-SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVS 61
L+C TH S L Q +SI +K I AH +K+G + + + L
Sbjct: 54 LLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCG 113
Query: 62 DRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPN 121
D + YAR+ F M+ + +WN++I + ++ EA+ + M + ++ P+
Sbjct: 114 D---IDYARQVFDGMSERHIVTWNSLIAYLIK-----HRRSKEAVEMYRLMITNNVL-PD 164
Query: 122 RFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLD-NDEFVASNLVRMYAMCGVMEDAYLLF 180
+T SV KA + + +E + HG V LGL+ ++ FV S LV MY G +A L+
Sbjct: 165 EYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVL 224
Query: 181 SNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWN 240
R++E VVL +
Sbjct: 225 D-----------------RVEEKDVVLITAL----------------------------- 238
Query: 241 VMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKN 300
I GY+Q G EA+ F M + V PN T SVL + L + GK +H K+
Sbjct: 239 --IVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS 296
Query: 301 EIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDY 360
E ++++ MY +C V+ +++VF+ IE N ++W+++I GL +GR AL
Sbjct: 297 GFESALASQTSLLTMYLRCSLVDDSLRVFKCIE-YPNQVSWTSLISGLVQNGREEMALIE 355
Query: 361 YRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+RKM + + P L CS+ + EEGR + + K
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 127/260 (48%), Gaps = 4/260 (1%)
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPN 270
++D ++ GDI +R++F+ M +R +V+WN +I+ ++ KEA++++ M +V P+
Sbjct: 105 LVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPD 164
Query: 271 YITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV-LGSAVIDMYAKCGSVEKAIQVF 329
TL SV A S L + + H A +E+ +V +GSA++DMY K G +A V
Sbjct: 165 EYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVL 224
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLI 389
+++E +K+ + +A+I G + G +A+ ++ M V P + Y +L +C + I
Sbjct: 225 DRVE-EKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDI 283
Query: 390 EEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLG 449
G+ + MVK G E + ++ V P+ V W +L+
Sbjct: 284 GNGKLIHGLMVK-SGFESALASQTSLL-TMYLRCSLVDDSLRVFKCIEYPNQVSWTSLIS 341
Query: 450 ACKMHGNVKMGERVARTLMK 469
+G +M R +M+
Sbjct: 342 GLVQNGREEMALIEFRKMMR 361
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 298/548 (54%), Gaps = 53/548 (9%)
Query: 15 HPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVS-DRRDLKYARKFF 73
H + Q+ C+S+ +L Q+H IK+ +I + + + ++ F + + +L YAR F
Sbjct: 5 HYKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVF 64
Query: 74 TQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACA 133
++ P+ + WN++IR ++ + NP +AL F+ +M +G P+ FTFP VLKAC+
Sbjct: 65 ESIDCPSVYIWNSMIRGYSNS-----PNPDKALIFYQEMLRKGY-SPDYFTFPYVLKACS 118
Query: 134 KMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCG-------VMEDA----YLLFSN 182
+ IQ G +HGFVVK G + + +V++ L+ MY CG V ED + + +
Sbjct: 119 GLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGS 178
Query: 183 YVSHFDNN---STKLVRNKRMQE-GV-----------------------------VVLWN 209
+S F NN S + + MQ GV V+L
Sbjct: 179 LISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDPYFQSKVGFNVILAT 238
Query: 210 VMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSP 269
+ID + + GD+ +R LF+ MP+R++VSWN +I+GY+QNG +EA+ +F DM ++P
Sbjct: 239 SLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAP 298
Query: 270 NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF 329
+ +T +SV+ A G +LG+ +H Y K D + A+++MYAK G E A + F
Sbjct: 299 DKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAF 358
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG-VTPTDVVYIGLLSACSHAGL 388
E +E KK+ I W+ +I GLA HG N+AL +++MQ+ G TP + Y+G+L ACSH GL
Sbjct: 359 EDLE-KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGL 417
Query: 389 IEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALL 448
+EEG+ F M + G+EP VEHYGCMVD V MP++P+ IW ALL
Sbjct: 418 VEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL 477
Query: 449 GACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRK 508
C +H N+++ +R+ + + SG YV LSNI+A G W V +R MK V K
Sbjct: 478 NGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDK 537
Query: 509 DPGCSWIE 516
G S +E
Sbjct: 538 VLGHSSVE 545
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/531 (34%), Positives = 306/531 (57%), Gaps = 29/531 (5%)
Query: 26 CKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWN 85
CK+I+ LKQIHA + GL+ + E++ S+S LKYA K F ++ P+ N
Sbjct: 22 CKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICN 81
Query: 86 TIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIH 145
++R A++ P + + + +M G V P+R+TF VLKAC+K+ G H
Sbjct: 82 HVLRGSAQS-----MKPEKTVSLYTEMEKRG-VSPDRYTFTFVLKACSKLEWRSNGFAFH 135
Query: 146 GFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH----FDNNSTKLVRNKRMQ 201
G VV+ G +E+V + L+ +A CG + A LF + + + ++ + ++
Sbjct: 136 GKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKID 195
Query: 202 EGV----------VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
E + V WNVMI G ++ ++ ++R+LF++ ++ VV+WN MISGY G+
Sbjct: 196 EAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGY 255
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLY-----AEKNEIEIDD 306
KEA+ +F +M+ P+ +T++S+L A + LG LE GK +H+Y + + I +
Sbjct: 256 PKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT 315
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQ 366
+ +A+IDMYAKCGS+++AI+VF ++++ + TW+ +I GLA+H A +++ + +MQ+
Sbjct: 316 PIWNALIDMYAKCGSIDRAIEVFRGVKDR-DLSTWNTLIVGLALH-HAEGSIEMFEEMQR 373
Query: 367 AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXX 426
V P +V +IG++ ACSH+G ++EGR F+ M + IEP ++HYGCMVD
Sbjct: 374 LKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLE 433
Query: 427 XXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFA 486
V +M I P+ ++W+ LLGACK++GNV++G+ L+ + +SG YV LSNI+A
Sbjct: 434 EAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYA 493
Query: 487 SRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDG--VIHEFLVEDESHPRAK 535
S G W GV +VR + V+K G S IE D ++ +L+ E R++
Sbjct: 494 STGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPESRSR 544
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 209/691 (30%), Positives = 340/691 (49%), Gaps = 91/691 (13%)
Query: 20 FPQIAR-CKSIKQL---KQIHAHFIKTGLIGD-PLAAAEILKFLSVSDRRDLKYARKFFT 74
FP + R C I L K++H H ++ G D + A I ++ D +K AR F
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD---VKSARLLFD 255
Query: 75 QMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGL----------VEPNRFT 124
+M + SWN +I + E MC EGL V+P+ T
Sbjct: 256 RMPRRDIISWNAMISGYFENG----------------MCHEGLELFFAMRGLSVDPDLMT 299
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS--- 181
SV+ AC +G + G++IH +V+ G D V ++L +MY G +A LFS
Sbjct: 300 LTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME 359
Query: 182 --------NYVSHFDNN--STKLVRNKRMQE--------------------------GV- 204
+S ++ N K + RM + GV
Sbjct: 360 RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Query: 205 -------------VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
V++ N +I+ + + I + +F+ +P+++V+SW +I+G N
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR 479
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
EA+ M+M + PN ITL + L A +R+GAL GK +H + + + +DD L +A
Sbjct: 480 CFEALIFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA 538
Query: 312 VIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
++DMY +CG + A F KK+ +W+ ++ G + G+ + ++ + +M ++ V P
Sbjct: 539 LLDMYVRCGRMNTAWSQFN--SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRP 596
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXX 431
++ +I LL CS + ++ +G F+ M + G+ P ++HY C+VD
Sbjct: 597 DEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKF 655
Query: 432 VLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNW 491
+ MP+ PD +W ALL AC++H + +GE A+ + +L G Y+ L N++A G W
Sbjct: 656 IQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKW 715
Query: 492 VGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSA 551
V +VR MKE + D GCSW+E+ G +H FL +D+ HP+ KEI ++LE ++
Sbjct: 716 REVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEV 775
Query: 552 GYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSI 611
G ++ E ++ HSER AIAFGLI+T P P+ + KNL +CE+CH ++
Sbjct: 776 GLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTV 835
Query: 612 KLISEIYKRKIIVRDRKRFHHFEKGVCSCMD 642
K IS+ +R+I VRD + FHHF+ G CSC D
Sbjct: 836 KFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 57/357 (15%)
Query: 45 IGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLE 104
+G L A + F+ + D Y F +M+ N FSWN ++ +A+ D E
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYV---FGKMSERNLFSWNVLVGGYAKQGYFD-----E 178
Query: 105 ALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLV 164
A+ + +M G V+P+ +TFP VL+ C + + GKE+H VV+ G + D V + L+
Sbjct: 179 AMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALI 238
Query: 165 RMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGAS 224
MY CG ++ A LLF RM ++ WN M
Sbjct: 239 TMYVKCGDVKSARLLFD-----------------RMPRRDIISWNAM------------- 268
Query: 225 RKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRL 284
ISGY +NG E +++F M+ V P+ +TL SV+ A L
Sbjct: 269 ------------------ISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 285 GALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAI 344
G LG+ +H Y +D + +++ MY GS +A ++F ++E +K+ ++W+ +
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTM 369
Query: 345 IGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
I G + + A+D YR M Q V P ++ +LSAC+ G ++ G L +K
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 44/320 (13%)
Query: 243 ISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEI 302
+ G NG +EAM + + MQ V+ + V+++ A E G V+ A +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALD-YY 361
+ LG+A + M+ + G++ A VF K+ +++N +W+ ++GG A G ++A+ Y+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKM-SERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 362 RKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXX 421
R + GV P + +L C + G+ + H+V+ G E ++ ++
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVK 243
Query: 422 XXXXXXXXXXVLNMPIR----------------------------------PDDVIWKAL 447
MP R PD + ++
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 448 LGACKMHGNVKMGERV-ARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDV 506
+ AC++ G+ ++G + A + F D +L+ ++ + G+W ++ +M+ D+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 507 RKDPGCSWIE-IDGVIHEFL 525
SW I G + FL
Sbjct: 364 -----VSWTTMISGYEYNFL 378
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 194/569 (34%), Positives = 305/569 (53%), Gaps = 60/569 (10%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCF 82
+ +C ++ Q+KQ+HA I+ L D A +++ LS+ + +L A + F Q+ PN
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEPNVH 83
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
N++IRA A+ P +A F +M GL N FT+P +LKAC+ + K
Sbjct: 84 LCNSLIRAHAQN-----SQPYQAFFVFSEMQRFGLFADN-FTYPFLLKACSGQSWLPVVK 137
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVM--EDAYLLFSNYVSHFDNNS--------- 191
+H + KLGL +D +V + L+ Y+ CG + DA LF +S D S
Sbjct: 138 MMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEK-MSERDTVSWNSMLGGLV 196
Query: 192 -TKLVRNKR-----MQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVM--- 242
+R+ R M + ++ WN M+DG+ R ++ + +LF KMP+R+ VSW+ M
Sbjct: 197 KAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMG 256
Query: 243 ------------------------------ISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
I+GYA+ G KEA + M + +
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
++S+L A + G L LG +H +++ + + + +A++DMYAKCG+++KA VF I
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 376
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
KK+ ++W+ ++ GL +HG +A++ + +M++ G+ P V +I +L +C+HAGLI+EG
Sbjct: 377 P-KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG 435
Query: 393 RSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACK 452
F M KV + P+VEHYGC+VD V MP+ P+ VIW ALLGAC+
Sbjct: 436 IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACR 495
Query: 453 MHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGC 512
MH V + + V L+KL P D G+Y LSNI+A+ +W GV ++R KMK M V K G
Sbjct: 496 MHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGA 555
Query: 513 SWIEIDGVIHEFLVEDESHPRAKEIRSML 541
S +E++ IHEF V D+SHP++ +I ML
Sbjct: 556 SSVELEDGIHEFTVFDKSHPKSDQIYQML 584
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 328 bits (841), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 202/622 (32%), Positives = 322/622 (51%), Gaps = 60/622 (9%)
Query: 24 ARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKY-ARKFFTQMNNPNCF 82
AR +S + Q+H + +K+GL PL A ++ F S S L + +R+ F +
Sbjct: 26 ARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQ---LPFDSRRAFEDSPQKSST 82
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
+W++II FA+ + P +L F +M + G + P+ PS K+CA + R G+
Sbjct: 83 TWSSIISCFAQNE-----LPWMSLEFLKKMMA-GNLRPDDHVLPSATKSCAILSRCDIGR 136
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQE 202
+H +K G D D FV S+LV MYA CG + A +F M +
Sbjct: 137 SVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFD-----------------EMPQ 179
Query: 203 GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM 262
VV W+ M + GYAQ G +EA+ +F +
Sbjct: 180 RNVVTWSGM-------------------------------MYGYAQMGENEEALWLFKEA 208
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
+++ N + SV+ + LELG+ +H + K+ + +GS+++ +Y+KCG
Sbjct: 209 LFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 323 EKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
E A QVF ++ KN W+A++ A H ++ +++M+ +G+ P + ++ +L+A
Sbjct: 269 EGAYQVFNEVP-VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327
Query: 383 CSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV 442
CSHAGL++EGR F+ M K IEP +HY +VD + NMPI P +
Sbjct: 328 CSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTES 386
Query: 443 IWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMK 502
+W ALL +C +H N ++ A + +L P SG +++LSN +A+ G + + R ++
Sbjct: 387 VWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLR 446
Query: 503 EMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLL 562
+ +K+ G SW+E +H F + H ++KEI L E+ + AGY + + VL
Sbjct: 447 DRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLR 506
Query: 563 NMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKI 622
+D ++K + YHSER+AIAFGLI+ P+R++KNLRVC DCH++IK +S +R I
Sbjct: 507 EVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVI 566
Query: 623 IVRDRKRFHHFEKGVCSCMDYW 644
IVRD RFH FE G CSC DYW
Sbjct: 567 IVRDNNRFHRFEDGKCSCNDYW 588
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 179/518 (34%), Positives = 271/518 (52%), Gaps = 59/518 (11%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
Q HAH +K GL DP ++ S S D +A + F + + +W +I F
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFD--FASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 94 TDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG- 152
+ EA+ +F +M G V N T SVLKA K+ ++ G+ +HG ++ G
Sbjct: 182 NG-----SASEAMVYFVEMKKTG-VAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGR 235
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
+ D F+ S+LV MY C +DA
Sbjct: 236 VKCDVFIGSSLVDMYGKCSCYDDA------------------------------------ 259
Query: 213 DGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
+K+F++MP R+VV+W +I+GY Q+ F + M VF +M DV+PN
Sbjct: 260 ------------QKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEK 307
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
TL SVL A + +GAL G+ VH Y KN IEI+ G+ +ID+Y KCG +E+AI VFE++
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL 367
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
++KN TW+A+I G A HG A DA D + M + V+P +V ++ +LSAC+H GL+EEG
Sbjct: 368 -HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEG 426
Query: 393 RSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACK 452
R LF M +EP+ +HY CMVD + MP+ P +V+W AL G+C
Sbjct: 427 RRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCL 486
Query: 453 MHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGC 512
+H + ++G+ A ++KL P SG Y L+N+++ NW V VR +MK+ V K PG
Sbjct: 487 LHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGF 546
Query: 513 SWIEIDGVIHEFLVEDESHP-RAKEIRSMLEEISNRIR 549
SWIE+ G + EF+ D+ P + ++ L+ + ++R
Sbjct: 547 SWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 214/501 (42%), Gaps = 101/501 (20%)
Query: 31 QLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRR------DLKYARKFFTQMNNPNCFSW 84
LKQIH L+ P+ FLS RR +YAR+ Q+ + W
Sbjct: 16 HLKQIHCL-----LLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLW 70
Query: 85 NTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEI 144
+++I F+ + + A + M G++ P+R TFP +LKA K+ R +
Sbjct: 71 DSLIGHFSGGITLNRRLSFLA---YRHMRRNGVI-PSRHTFPPLLKAVFKL-RDSNPFQF 125
Query: 145 HGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGV 204
H +VK GLD+D FV ++L+ Y+ G+ + A LF ++
Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDG-----------------AEDKD 168
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
VV W MIDGFVR NG EAM F +M+
Sbjct: 169 VVTWTAMIDGFVR-------------------------------NGSASEAMVYFVEMKK 197
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVH-LYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
V+ N +T+VSVL A ++ + G+ VH LY E ++ D +GS+++DMY KC +
Sbjct: 198 TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD 257
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC 383
A +VF+++ + +N +TW+A+I G + + + +M ++ V P + +LSAC
Sbjct: 258 DAQKVFDEMPS-RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSAC 316
Query: 384 SHAGLIEEGRSLFNHMVK-------VVGI-----------------------EPRVEHYG 413
+H G + GR + +M+K G E V +
Sbjct: 317 AHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWT 376
Query: 414 CMVDXXXX---XXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKL 470
M++ +L+ + P++V + A+L AC G V+ G R+ ++
Sbjct: 377 AMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGR 436
Query: 471 FPHD--SGSYVALSNIFASRG 489
F + + Y + ++F +G
Sbjct: 437 FNMEPKADHYACMVDLFGRKG 457
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 302/571 (52%), Gaps = 65/571 (11%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCF 82
I +C S Q+KQ+ +HF+ G + +L+ ++S DL +A + F + P
Sbjct: 10 IQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTN 69
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSE-----GLVEPNRFTFPSVLKACAKMGR 137
WN IIR FA + +P A ++ M + + + T LKACA+
Sbjct: 70 DWNAIIRGFAGS-----SHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
++H + + GL D
Sbjct: 125 SSAMDQLHCQINRRGLSADS---------------------------------------- 144
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
+L ++D + + GD+ ++ KLF++MP R V SWN +I+G EAM+
Sbjct: 145 --------LLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAME 196
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWV-HLYAEKNEIEIDDVLGSAVIDMY 316
++ M+ + + +T+V+ L A S LG ++ G+ + H Y+ N I + +A IDMY
Sbjct: 197 LYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAIDMY 251
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
+KCG V+KA QVFE+ KK+ +TW+ +I G A+HG A+ AL+ + K++ G+ P DV Y
Sbjct: 252 SKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSY 311
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
+ L+AC HAGL+E G S+FN+M G+E ++HYGC+VD + +M
Sbjct: 312 LAALTACRHAGLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMS 370
Query: 437 IRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVE 496
+ PD V+W++LLGA +++ +V+M E +R + ++ ++ G +V LSN++A++G W V
Sbjct: 371 MIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGR 430
Query: 497 VRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPN 556
VR M+ V+K PG S+IE G IHEF D+SH + +EI ++EI +IR GY
Sbjct: 431 VRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQ 490
Query: 557 ITQVLLNMDEEKKESALHYHSERIAIAFGLI 587
VL ++ EE+KE+AL YHSE++A+A+GL+
Sbjct: 491 TGLVLHDIGEEEKENALCYHSEKLAVAYGLM 521
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/620 (30%), Positives = 305/620 (49%), Gaps = 64/620 (10%)
Query: 35 IHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAET 94
+H +K G D ++ +S +++ ARK F +M PN SW ++I +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLV--ISYVKLKEINTARKLFDEMCEPNVVSWTSVISGY--- 105
Query: 95 DDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLD 154
+D P AL F +M + V PN +TF SV KAC+ + + GK IH + GL
Sbjct: 106 --NDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLR 163
Query: 155 NDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDG 214
+ V+S+LV MY C +E A +F + + +
Sbjct: 164 RNIVVSSSLVDMYGKCNDVETARRVFDSMIGY---------------------------- 195
Query: 215 FVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS--PNYI 272
R+VVSW MI+ YAQN EA+++F S N
Sbjct: 196 ------------------GRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQF 237
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
L SV+ A S LG L+ GK H + E + V+ ++++DMYAKCGS+ A ++F +I
Sbjct: 238 MLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRI 297
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
+ I+++++I A HG A+ + +M + P V +G+L ACSH+GL+ EG
Sbjct: 298 RC-HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEG 356
Query: 393 RSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDD--VIWKALLGA 450
+ M + G+ P HY C+VD + + + ++W ALL A
Sbjct: 357 LEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSA 416
Query: 451 CKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDP 510
++HG V++ ++ L++ + +Y+ALSN +A G W +RL+MK K+
Sbjct: 417 GRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKER 476
Query: 511 GCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYR------PNITQVLLNM 564
CSWIE ++ F D S + EI L+++ R++ G+R + V +++
Sbjct: 477 ACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDV 536
Query: 565 DEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIV 624
DEE K+ + H ER+A+A+GL+ + +RI+ NLR+C DCH + KLISEI +R+I+V
Sbjct: 537 DEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVV 596
Query: 625 RDRKRFHHFEKGVCSCMDYW 644
RD RFH F+ G C+C DYW
Sbjct: 597 RDVNRFHCFKNGSCTCRDYW 616
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 298/545 (54%), Gaps = 35/545 (6%)
Query: 7 PTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDL 66
P T P + I R + + + +++H + +K GL D + ++ + + ++
Sbjct: 44 PDNFTLPV----VLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEI 99
Query: 67 KYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFP 126
+ K F +M + SWN +I ++ + +A+G F +M E ++ + T
Sbjct: 100 TH--KVFDEMPQRDVVSWNGLISSYVGNGRFE-----DAIGVFKRMSQESNLKFDEGTIV 152
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
S L AC+ + ++ G+ I+ FVV + + + LV M+ CG ++ A +F +
Sbjct: 153 STLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDS---- 207
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGY 246
M++ V W M+ G+V G I +R LF + P + VV W M++GY
Sbjct: 208 -------------MRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGY 254
Query: 247 AQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD 306
Q F EA+++F MQ + P+ LVS+L ++ GALE GKW+H Y +N + +D
Sbjct: 255 VQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDK 314
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQ 366
V+G+A++DMYAKCG +E A++VF +I+ + A +W+++I GLAM+G + ALD Y +M+
Sbjct: 315 VVGTALVDMYAKCGCIETALEVFYEIKERDTA-SWTSLIYGLAMNGMSGRALDLYYEMEN 373
Query: 367 AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXX 426
GV + ++ +L+AC+H G + EGR +F+ M + ++P+ EH C++D
Sbjct: 374 VGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLD 433
Query: 427 XXXXXVLNMPIRPDDV---IWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSN 483
+ M D+ ++ +LL A + +GNVK+ ERVA L K+ DS ++ L++
Sbjct: 434 EAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLAS 493
Query: 484 IFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDE--SHPRAKEIRSML 541
++AS W V VR KMK++ +RK PGCS IEIDGV HEF+V D+ SHP+ EI SML
Sbjct: 494 VYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Query: 542 EEISN 546
+ +N
Sbjct: 554 HQTTN 558
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Query: 235 SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVH 294
S++ +N M+ A F + + +F +++ + P+ TL VL +I RL + G+ VH
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 295 LYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRA 354
YA K +E D + ++++ MYA G +E +VF+++ +++ ++W+ +I +GR
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMP-QRDVVSWNGLISSYVGNGRF 128
Query: 355 NDALDYYRKM-QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRV 409
DA+ +++M Q++ + + + LSACS +E G ++ +V + R+
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 321 bits (823), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 174/453 (38%), Positives = 262/453 (57%), Gaps = 23/453 (5%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQE--GKEIHGFVVKLGLD-NDEFVA 160
EA F M G VEPN TF ++L C E G +HG+ KLGLD N V
Sbjct: 54 EAAKEFSDMTLAG-VEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVG 112
Query: 161 SNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGD 220
+ ++ MY+ G + A L+F +Y+ D NS V WN MIDG++R G
Sbjct: 113 TAIIGMYSKRGRFKKARLVF-DYME--DKNS--------------VTWNTMIDGYMRSGQ 155
Query: 221 IGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPA 280
+ + K+F+KMP+R ++SW MI+G+ + G+ +EA+ F +MQ+ V P+Y+ +++ L A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 281 ISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAIT 340
+ LGAL G WVH Y + + + + +++ID+Y +CG VE A QVF +E K+ ++
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME-KRTVVS 274
Query: 341 WSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMV 400
W+++I G A +G A+++L Y+RKMQ+ G P V + G L+ACSH GL+EEG F M
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 401 KVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHG-NVKM 459
I PR+EHYGC+VD V +MP++P++V+ +LL AC HG N+ +
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVL 394
Query: 460 GERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDG 519
ER+ + L L +YV LSN++A+ G W G ++R KMK + ++K PG S IEID
Sbjct: 395 AERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDD 454
Query: 520 VIHEFLVEDESHPRAKEIRSMLEEISNRIRSAG 552
+H F+ D +H IR +LE IS+ +R G
Sbjct: 455 CMHVFMAGDNAHVETTYIREVLELISSDLRLQG 487
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 33/197 (16%)
Query: 229 NKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRL--GA 286
N+ + VSW I+ +NG EA F DM + V PN+IT +++L G+
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 287 LELGKWVHLYAEKNEIEIDDVL-GSAVIDMYAKCGSVEKAIQVFEKIENK---------- 335
LG +H YA K ++ + V+ G+A+I MY+K G +KA VF+ +E+K
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 336 --------------------KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVV 375
++ I+W+A+I G G +AL ++R+MQ +GV P V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 376 YIGLLSACSHAGLIEEG 392
I L+AC++ G + G
Sbjct: 209 IIAALNACTNLGALSFG 225
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 55/285 (19%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
A K F +M + SW +I F + + EAL +F +M G V+P+ +
Sbjct: 159 AAKMFDKMPERDLISWTAMINGFVKKGYQE-----EALLWFREMQISG-VKPDYVAIIAA 212
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD 188
L AC +G + G +H +V+ N+ V+++L+ +Y CG +E A +F N
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN------ 266
Query: 189 NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
M++ VV WN +I GF A
Sbjct: 267 -----------MEKRTVVSWNSVIVGF-------------------------------AA 284
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIEIDDV 307
NG E++ F MQ P+ +T L A S +G +E G ++ + I
Sbjct: 285 NGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIE 344
Query: 308 LGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHG 352
++D+Y++ G +E A+++ + + K N + +++ + HG
Sbjct: 345 HYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 309/602 (51%), Gaps = 100/602 (16%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLK-YARKFF-- 73
SS + CK+ + QIH IKTG+I + I+ + S R L +AR F
Sbjct: 6 SSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHE 65
Query: 74 --------TQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
++ +P F WN +I++ + K+P +AL M G V ++F+
Sbjct: 66 YHVCSFSFGEVEDP--FLWNAVIKSHSHG-----KDPRQALLLLCLMLENG-VSVDKFSL 117
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVK----------------------LGLDN-------- 155
VLKAC+++G ++ G +IHGF+ K LGL
Sbjct: 118 SLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPK 177
Query: 156 -DEFVASNLVRMYAMCGVMEDAYLLF-----------------SNYVSHFD--NNSTKL- 194
D ++++ Y CG++ A LF S Y D + ++KL
Sbjct: 178 RDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLF 237
Query: 195 ------------------VRNKRMQEGV----------VVLWNVMIDGFVRLGDIGASRK 226
V++ R+++ VV W MIDG+ +LG + ++
Sbjct: 238 ADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKT 297
Query: 227 LFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM-GDVSPNYITLVSVLPAISRLG 285
LF++MP R VV++N M++GY QN + EA+++F DM+ + P+ TLV VLPAI++LG
Sbjct: 298 LFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 357
Query: 286 ALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAII 345
L +HLY + + + LG A+IDMY+KCGS++ A+ VFE IENK + W+A+I
Sbjct: 358 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK-SIDHWNAMI 416
Query: 346 GGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGI 405
GGLA+HG A D ++++ + P D+ ++G+L+ACSH+GL++EG F M + I
Sbjct: 417 GGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKI 476
Query: 406 EPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVAR 465
EPR++HYGCMVD + MP+ P+DVIW+ L AC H + GE VA+
Sbjct: 477 EPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAK 536
Query: 466 TLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFL 525
L+ ++ SYV LSN++AS G W V VR MKE + K PGCSWIE+DG +HEF
Sbjct: 537 HLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFF 596
Query: 526 VE 527
V+
Sbjct: 597 VD 598
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 187/561 (33%), Positives = 297/561 (52%), Gaps = 28/561 (4%)
Query: 9 TATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKY 68
+A+ P +L I +C + K L+ A IKT L D + + + R DL
Sbjct: 21 SASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDL-- 78
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
A TQM PN F +N + + F +P+ +L + +M + V P+ +T+ S+
Sbjct: 79 AVSTMTQMQEPNVFVYNALFKGFVTCS-----HPIRSLELYVRMLRDS-VSPSSYTYSSL 132
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF-------- 180
+KA + R E + H + K G + + L+ Y+ G + +A +F
Sbjct: 133 VKASSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDD 190
Query: 181 -------SNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQ 233
S Y D +S + N+ M E N +I+G++ LG++ + LFN+MP
Sbjct: 191 IAWTTMVSAYRRVLDMDSANSLANQ-MSEKNEATSNCLINGYMGLGNLEQAESLFNQMPV 249
Query: 234 RSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWV 293
+ ++SW MI GY+QN ++EA+ VF+ M + P+ +T+ +V+ A + LG LE+GK V
Sbjct: 250 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEV 309
Query: 294 HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGR 353
H+Y +N +D +GSA++DMY+KCGS+E+A+ VF + KKN W++II GLA HG
Sbjct: 310 HMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAHGF 368
Query: 354 ANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYG 413
A +AL + KM+ V P V ++ + +AC+HAGL++EGR ++ M+ I VEHYG
Sbjct: 369 AQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYG 428
Query: 414 CMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPH 473
MV + NM P+ VIW ALL C++H N+ + E LM L P
Sbjct: 429 GMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPM 488
Query: 474 DSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKD-PGCSWIEIDGVIHEFLVEDESHP 532
+SG Y L +++A + W V E+R +M+E+ + K PG S I ID H F D+SH
Sbjct: 489 NSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHS 548
Query: 533 RAKEIRSMLEEISNRIRSAGY 553
+ E+ +L+EI +++ AGY
Sbjct: 549 ASDEVCLLLDEIYDQMGLAGY 569
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 185/573 (32%), Positives = 295/573 (51%), Gaps = 63/573 (10%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+ IH +K+G + D + A+ ++ + + + + + F +M + SWNT+I F
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNL--FENSLQVFDEMPERDVASWNTVISCFY 184
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
++ + + +AL FG+M S G EPN + + AC+++ ++ GKEIH VK G
Sbjct: 185 QSGEAE-----KALELFGRMESSGF-EPNSVSLTVAISACSRLLWLERGKEIHRKCVKKG 238
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSN---------------YVSHFDNNSTKLVRN 197
+ DE+V S LV MY C +E A +F YV+ D+ S + N
Sbjct: 239 FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILN 298
Query: 198 KRMQEGV----------------------------VVLWNV----------MIDGFVRLG 219
+ + EG V+ +V +ID + + G
Sbjct: 299 RMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG 358
Query: 220 DIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
+ + +F+K + SWNVMIS Y G + +A++V+ M V P+ +T SVLP
Sbjct: 359 EANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAI 339
A S+L ALE GK +HL ++ +E D++L SA++DMY+KCG+ ++A ++F I KK+ +
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVV 477
Query: 340 TWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
+W+ +I HG+ +AL + +MQ+ G+ P V + +LSAC HAGLI+EG F+ M
Sbjct: 478 SWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537
Query: 400 VKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV-IWKALLGACKMHGNVK 458
GIEP +EHY CM+D + P D+ + L AC +H
Sbjct: 538 RSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHS 597
Query: 459 MGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEID 518
+G+R+AR L++ +P D+ +Y+ L N++AS +W VRLKMKEM +RK PGCSWIE+
Sbjct: 598 LGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMS 657
Query: 519 GVIHEFLVEDESHPRAKEIRSMLEEISNRIRSA 551
+ F ED SH RA+ + L +S + S
Sbjct: 658 DKVCHFFAEDRSHLRAENVYECLALLSGHMESG 690
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 174/380 (45%), Gaps = 61/380 (16%)
Query: 27 KSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN-NPNCFSWN 85
KS++++K +H + GL D + ++ +D AR F + + + WN
Sbjct: 18 KSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTC--KDHCSARHVFENFDIRSDVYIWN 75
Query: 86 TIIRAFAETDDDDYKNPL--EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKE 143
+++ ++ KN + + L F ++ + + P+ FTFP+V+KA +GR G+
Sbjct: 76 SLMSGYS-------KNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 144 IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEG 203
IH VVK G D VAS+LV MYA + LF N + FD M E
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYA-------KFNLFENSLQVFD----------EMPER 171
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQ 263
V WN +I F Q+G ++A+++F M+
Sbjct: 172 DVASWNTVISCFY-------------------------------QSGEAEKALELFGRME 200
Query: 264 MGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
PN ++L + A SRL LE GK +H K E+D+ + SA++DMY KC +E
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC 383
A +VF+K+ +K+ + W+++I G G + ++ +M G P+ +L AC
Sbjct: 261 VAREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 384 SHAGLIEEGRSLFNHMVKVV 403
S + + G+ + ++++ V
Sbjct: 320 SRSRNLLHGKFIHGYVIRSV 339
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 153/346 (44%), Gaps = 60/346 (17%)
Query: 10 ATRPTHPS--SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLK 67
TRP+ + S+ +R +++ K IH + I++ + D ++ +L
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL- 362
Query: 68 YARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPS 127
A F++ SWN +I ++ N +A+ + QM S G V+P+ TF S
Sbjct: 363 -AETVFSKTQKDVAESWNVMISSYISVG-----NWFKAVEVYDQMVSVG-VKPDVVTFTS 415
Query: 128 VLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHF 187
VL AC+++ +++GK+IH + + L+ DE + S L+ MY+ CG ++A+ +F
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIF------- 468
Query: 188 DNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYA 247
N +P++ VVSW VMIS Y
Sbjct: 469 -----------------------------------------NSIPKKDVVSWTVMISAYG 487
Query: 248 QNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIEIDD 306
+G +EA+ F +MQ + P+ +TL++VL A G ++ G K+ K IE
Sbjct: 488 SHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPII 547
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKI-ENKKNAITWSAIIGGLAMH 351
S +ID+ + G + +A ++ ++ E NA S + +H
Sbjct: 548 EHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLH 593
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/487 (33%), Positives = 278/487 (57%), Gaps = 26/487 (5%)
Query: 58 LSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGL 117
L+V+ D+ YA KF +++++P + WN +IR F+ + +NP +++ + QM GL
Sbjct: 796 LAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNS-----RNPEKSISVYIQMLRFGL 850
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
+ P+ T+P ++K+ +++ + G +H VVK GL+ D F+ + L+ MY A
Sbjct: 851 L-PDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASAR 909
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV 237
LF M +V WN ++D + + GD+ ++R +F++M +R VV
Sbjct: 910 KLFD-----------------EMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 952
Query: 238 SWNVMISGYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLY 296
+W+ MI GY + G + +A+++F M +MG N +T+VSV+ A + LGAL GK VH Y
Sbjct: 953 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 1012
Query: 297 AEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK-NAITWSAIIGGLAMHGRAN 355
+ + +L +++IDMYAKCGS+ A VF + K+ +A+ W+AIIGGLA HG
Sbjct: 1013 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 1072
Query: 356 DALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCM 415
++L + KM+++ + P ++ ++ LL+ACSH GL++E F + K G EP+ EHY CM
Sbjct: 1073 ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACM 1131
Query: 416 VDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDS 475
VD + MPI+P + ALL C HGN+++ E V + L++L PH+
Sbjct: 1132 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHND 1191
Query: 476 GSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAK 535
G YV L+N++A + +R M++ V+K G S +++DG H F+ D++H +
Sbjct: 1192 GRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSD 1251
Query: 536 EIRSMLE 542
+I ++L+
Sbjct: 1252 KIYAVLQ 1258
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 147/351 (41%), Gaps = 35/351 (9%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ S + +I + + D A+ + GL+ P + ++++ K GR
Sbjct: 437 PDSDSLSIVINCLVKANKVDM-----AVTLLHDIVQNGLI-PGPMMYNNIIEGMCKEGRS 490
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYA-MCGVMEDAYLL-------FSNYVSHFDNN 190
+E ++ G + G++ +F + + A C + LL F ++ H
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFL 550
Query: 191 STKLVRNKRMQE--------------GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS- 235
KL N R + G +V IDG ++ + +LF +
Sbjct: 551 VKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGH 610
Query: 236 ---VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKW 292
V++++V+I + EA +F++M + P T S++ + G ++ G
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLS 670
Query: 293 VHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLA 349
+ ++E D + +++I G +AI + +++ K N IT+ A+I GL
Sbjct: 671 CIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLC 730
Query: 350 MHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMV 400
G + +AL Y+R+M++ + P VY+ L+S+ + I G +F MV
Sbjct: 731 KCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMV 781
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 305 bits (780), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 278/531 (52%), Gaps = 35/531 (6%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCF 82
I++ + + LKQ+ + I +GL ++L+F ++ +L YAR F + + PN
Sbjct: 31 ISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLR-LCNLSYARFIFDRFSFPNTH 89
Query: 83 SWNTIIRAFAETDDDDYKNPLEA---LGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
+ ++ A++ + PL A FF M + + PN F +P VLK+ +
Sbjct: 90 LYAAVLTAYSSSL------PLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAF 143
Query: 140 EGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN-- 197
+H + K G V + L+ YA + VSH L R
Sbjct: 144 STPLVHTHLFKSGFHLYVVVQTALLHSYA-------------SSVSHI-----TLARQLF 185
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
M E VV W M+ G+ R GDI + LF MP+R V SWN +++ QNG F EA+
Sbjct: 186 DEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVS 245
Query: 258 VFHDM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
+F M + PN +T+V VL A ++ G L+L K +H +A + ++ D + ++++D+Y
Sbjct: 246 LFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLY 305
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT---PTD 373
KCG++E+A VF K+ +KK+ W+++I A+HGR+ +A+ + +M + + P
Sbjct: 306 GKCGNLEEASSVF-KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDH 364
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVL 433
+ +IGLL+AC+H GL+ +GR F+ M GIEPR+EHYGC++D +
Sbjct: 365 ITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMS 424
Query: 434 NMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVG 493
M ++ D+ IW +LL ACK+HG++ + E + L+ L P++ G ++N++ GNW
Sbjct: 425 TMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEE 484
Query: 494 VVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEI 544
R +K + K PG S IEID +H+F D+SHP +EI +L+ +
Sbjct: 485 ARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 312/606 (51%), Gaps = 61/606 (10%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
K+IHA +K+ L L + + + A + QMNN + +WN++I+ +
Sbjct: 267 KEIHASVLKSSTHSSELYVCNALIAMYTRCGK-MPQAERILRQMNNADVVTWNSLIKGYV 325
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+ + YK EAL FF M + G + + + S++ A ++ + G E+H +V+K G
Sbjct: 326 Q--NLMYK---EALEFFSDMIAAGH-KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 379
Query: 153 LDNDEFVASNLVRMYAMCGV----------MEDAYLL-FSNYVSHFDNNSTKL------- 194
D++ V + L+ MY+ C + M D L+ ++ ++ + N +
Sbjct: 380 WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFR 439
Query: 195 -VRNKRMQ-------------------------------EGVV--VLWNVMIDGFVRLGD 220
V KRM+ +G++ V+ N ++D + + +
Sbjct: 440 DVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRN 499
Query: 221 IGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPA 280
+G + ++F + + VVSW MIS A NG EA+++F M +S + + L+ +L A
Sbjct: 500 MGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSA 559
Query: 281 ISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAIT 340
+ L AL G+ +H Y + ++ + AV+DMYA CG ++ A VF++IE +K +
Sbjct: 560 AASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE-RKGLLQ 618
Query: 341 WSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMV 400
++++I MHG A++ + KM+ V+P + ++ LL ACSHAGL++EGR M
Sbjct: 619 YTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIME 678
Query: 401 KVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMG 460
+EP EHY C+VD V M P +W ALL AC+ H ++G
Sbjct: 679 HEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIG 738
Query: 461 ERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGV 520
E A+ L++L P + G+ V +SN+FA +G W V +VR KMK + K PGCSWIE+DG
Sbjct: 739 EIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGK 798
Query: 521 IHEFLVEDESHPRAKEIRSMLEEISNRI-RSAGYRPNITQVLLNMDEEKKESALHYHSER 579
+H+F D+SHP +KEI L E++ ++ R GY + VL N+DE +K LH HSER
Sbjct: 799 VHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSER 858
Query: 580 IAIAFG 585
IAIA+G
Sbjct: 859 IAIAYG 864
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 155/345 (44%), Gaps = 55/345 (15%)
Query: 58 LSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGL 117
L + +R K F +M + F+WNT+I A+ + P AL + M EG
Sbjct: 87 LELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGE-----PASALALYWNMRVEG- 140
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
V +FP++LKACAK+ I+ G E+H +VKLG + F+ + LV MYA + A
Sbjct: 141 VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAAR 200
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV 237
LF DGF GD V
Sbjct: 201 RLF--------------------------------DGFQEKGD---------------AV 213
Query: 238 SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYA 297
WN ++S Y+ +G E +++F +M M +PN T+VS L A +LGK +H
Sbjct: 214 LWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV 273
Query: 298 EKNEIEIDDV-LGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAND 356
K+ ++ + +A+I MY +CG + +A ++ ++ N + +TW+++I G + +
Sbjct: 274 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM-NNADVVTWNSLIKGYVQNLMYKE 332
Query: 357 ALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
AL+++ M AG +V +++A + G L +++K
Sbjct: 333 ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 377
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 146/326 (44%), Gaps = 58/326 (17%)
Query: 27 KSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNT 86
KS+ +K+IH H ++ GL+ D + E++ R++ YA + F + + SW +
Sbjct: 464 KSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKC--RNMGYATRVFESIKGKDVVSWTS 520
Query: 87 IIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHG 146
+I + A ++ EA+ F +M GL + +L A A + + +G+EIH
Sbjct: 521 MISSSALNGNES-----EAVELFRRMVETGL-SADSVALLCILSAAASLSALNKGREIHC 574
Query: 147 FVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVV 206
++++ G + +A +V MYA CG ++ A
Sbjct: 575 YLLRKGFCLEGSIAVAVVDMYACCGDLQSA------------------------------ 604
Query: 207 LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD 266
+ +F+++ ++ ++ + MI+ Y +G K A+++F M+ +
Sbjct: 605 ------------------KAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN 646
Query: 267 VSPNYITLVSVLPAISRLGALELGK-WVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKA 325
VSP++I+ +++L A S G L+ G+ ++ + + E+E ++DM + V +A
Sbjct: 647 VSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEA 706
Query: 326 IQVFEKIENKKNAITWSAIIGGLAMH 351
+ + ++ + A W A++ H
Sbjct: 707 FEFVKMMKTEPTAEVWCALLAACRSH 732
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 299/533 (56%), Gaps = 43/533 (8%)
Query: 29 IKQLKQIHAHFIKTGLI--GDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNT 86
+ ++KQIH H I +G + G+ L + + ++ + + A K F +M +P+ S+N
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGN---FGVAEKVFARMPHPDVSSFNV 202
Query: 87 IIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHG 146
+I +A+ LEAL + +M S+G +EP+ +T S+L C + I+ GK +HG
Sbjct: 203 MIVGYAKQGFS-----LEALKLYFKMVSDG-IEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 147 FVVKLG--LDNDEFVASNLVRMYAMC---GVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQ 201
++ + G ++ +++ L+ MY C G+ + A FD K +R+
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRA----------FDAMKKKDMRS---- 302
Query: 202 EGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAM-DVFH 260
WN M+ GFVRLGD+ A++ +F++MP+R +VSWN ++ GY++ G + + ++F+
Sbjct: 303 ------WNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFY 356
Query: 261 DMQMGD-VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC 319
+M + + V P+ +T+VS++ + G L G+WVH + +++ D L SA+IDMY KC
Sbjct: 357 EMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKC 416
Query: 320 GSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGL 379
G +E+A VF K +K+ W+++I GLA HG AL + +MQ+ GVTP +V + +
Sbjct: 417 GIIERAFMVF-KTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAV 475
Query: 380 LSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVL-NMPIR 438
L+ACSH+GL+EEG +FNHM G +P EHYG +VD V MP+R
Sbjct: 476 LTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMR 535
Query: 439 PDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVR 498
P +W ++L AC+ +++ E L+KL P G YV LSNI+A+ G W + R
Sbjct: 536 PSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTR 595
Query: 499 LKMKEMDVRKDPG-CSWIEIDGVIHEFL-VEDESHPRAKEIRSMLEEISNRIR 549
M+ V+K G S + ++G +H F+ E ++HPR EI+ +L+ + N ++
Sbjct: 596 EAMENRGVKKTAGYSSVVGVEG-LHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 177/406 (43%), Gaps = 69/406 (16%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRD 65
+P + + H S + + C S Q KQ+ A ++ LI D + ++ F +++ +
Sbjct: 26 DPVQSLQLNHQSLVL--LENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPEN 83
Query: 66 LKYARKFFTQMN-NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
L A+ F NPN F +NT+I A + + + E G + M V P+R T
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN-------ECFGLYSSMIRHR-VSPDRQT 135
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
F ++KA + + + K+IH C ++ L NY
Sbjct: 136 FLYLMKASSFLSEV---KQIH------------------------CHIIVSGCLSLGNY- 167
Query: 185 SHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMIS 244
LWN ++ ++ LG+ G + K+F +MP V S+NVMI
Sbjct: 168 ----------------------LWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIV 205
Query: 245 GYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNE--I 302
GYA+ GF EA+ ++ M + P+ T++S+L L + LGK VH + E+
Sbjct: 206 GYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVY 265
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYR 362
+ +L +A++DMY KC A + F+ ++ KK+ +W+ ++ G G A +
Sbjct: 266 SSNLILSNALLDMYFKCKESGLAKRAFDAMK-KKDMRSWNTMVVGFVRLGDMEAAQAVFD 324
Query: 363 KMQQAGVTPTDVVYIGLLSACSHAGLIEEG-RSLFNHMVKVVGIEP 407
+M + + V + LL S G + R LF M V ++P
Sbjct: 325 QMPKRDL----VSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKP 366
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 206/722 (28%), Positives = 338/722 (46%), Gaps = 106/722 (14%)
Query: 19 LFPQI----ARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFT 74
LFP+I A C ++ K IH+ IK G+ + IL + +L +A KFF
Sbjct: 183 LFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG--ELDFATKFFR 240
Query: 75 QMN-----------------------------------NPNCFSWNTIIRAFAETDDDDY 99
+M +P +WN +I + + D
Sbjct: 241 RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDA 300
Query: 100 KNPL------------------------------EALGFFGQMCSEGLVEPNRFTFPSVL 129
L +AL F +M G+V PN T S +
Sbjct: 301 AMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV-PNAVTIMSAV 359
Query: 130 KACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY----VS 185
AC+ + I +G E+H VK+G +D V ++LV MY+ CG +EDA +F + V
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY 419
Query: 186 HFDNNSTKLVRN----------KRMQEGV----VVLWNVMIDGFVRLGDIGASRKLFNKM 231
+++ T + RMQ+ ++ WN MI G+++ GD G + LF +M
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Query: 232 P-----QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGA 286
QR+ +WN++I+GY QNG EA+++F MQ PN +T++S+LPA + L
Sbjct: 480 EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLG 539
Query: 287 LELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIG 346
++ + +H + ++ + +A+ D YAK G +E + +F +E K+ ITW+++IG
Sbjct: 540 AKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET-KDIITWNSLIG 598
Query: 347 GLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIE 406
G +HG AL + +M+ G+TP ++ A G ++EG+ +F + I
Sbjct: 599 GYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHII 658
Query: 407 PRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVART 466
P +EH MV + M I+ + IW++ L C++HG++ M A
Sbjct: 659 PALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAEN 718
Query: 467 LMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLV 526
L L P ++ + +S I+A +E ++ ++K G SWIE+ +IH F
Sbjct: 719 LFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTT 778
Query: 527 EDESHPRAKEIRSMLEEISNRI--RSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAF 584
D+S + ++E++S R+ RS Y L ++EE +E HSE+ A+AF
Sbjct: 779 GDQSKLCTDVLYPLVEKMS-RLDNRSDQYNGE-----LWIEEEGREETCGIHSEKFAMAF 832
Query: 585 GLISTR--PQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMD 642
GLIS+ +T +RI+KNLR+C DCH + K +S+ Y I++ D + HHF+ G CSC D
Sbjct: 833 GLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKD 892
Query: 643 YW 644
YW
Sbjct: 893 YW 894
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 206/399 (51%), Gaps = 38/399 (9%)
Query: 28 SIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRD-LKYARKFFTQMNNPNCFSWNT 86
SI + +HA F GL +P E K LS+ + + ARK F M N F+W+
Sbjct: 96 SIHLGRILHARF---GLFTEPDVFVET-KLLSMYAKCGCIADARKVFDSMRERNLFTWSA 151
Query: 87 IIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHG 146
+I A++ ++ ++ E F M +G++ P+ F FP +L+ CA G ++ GK IH
Sbjct: 152 MIGAYSR--ENRWR---EVAKLFRLMMKDGVL-PDDFLFPKILQGCANCGDVEAGKVIHS 205
Query: 147 FVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF------------SNYVSHFDNN---- 190
V+KLG+ + V+++++ +YA CG ++ A F S +++ N
Sbjct: 206 VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEE 265
Query: 191 STKLVRNKRMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQ----RSVVSWNVMI 243
+ +LV+ +EG+ +V WN++I G+ +LG A+ L KM V +W MI
Sbjct: 266 AVELVKEME-KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 244 SGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIE 303
SG NG +A+D+F M + V PN +T++S + A S L + G VH A K
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF- 383
Query: 304 IDDVL-GSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYR 362
IDDVL G++++DMY+KCG +E A +VF+ ++N K+ TW+++I G G A + +
Sbjct: 384 IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN-KDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 363 KMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+MQ A + P + + ++S G E LF M K
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
SL P A K +++IH ++ L D + A + + + D++Y+R F M
Sbjct: 529 SLLPACANLLGAKMVREIHGCVLRRNL--DAIHAVKNALTDTYAKSGDIEYSRTIFLGME 586
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
+ +WN++I + + + AL F QM ++G + PNR T S++ A MG
Sbjct: 587 TKDIITWNSLIGGYVL-----HGSYGPALALFNQMKTQG-ITPNRGTLSSIILAHGLMGN 640
Query: 138 IQEGKEI 144
+ EGK++
Sbjct: 641 VDEGKKV 647
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 202/664 (30%), Positives = 305/664 (45%), Gaps = 136/664 (20%)
Query: 26 CKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM-NNPNC 81
C S+ L +QIH H IKTG D +L + R + A F M N
Sbjct: 135 CTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR--ISEAEYLFETMEGEKNN 192
Query: 82 FSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEG 141
+W +++ +++ +A+ F + EG + N++TFPSVL ACA + + G
Sbjct: 193 VTWTSMLTGYSQNG-----FAFKAIECFRDLRREG-NQSNQYTFPSVLTACASVSACRVG 246
Query: 142 KEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQ 201
++H +VK G + +V S L+ MYA C ME A L M+
Sbjct: 247 VQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEG-----------------ME 289
Query: 202 EGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV------------------------- 236
VV WN MI G VR G IG + +F +M +R +
Sbjct: 290 VDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIAS 349
Query: 237 ---------------VSWNVMISGYAQNGFFKEAMDVFH--------------------- 260
+ N ++ YA+ G A+ VF
Sbjct: 350 SAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNG 409
Query: 261 ----------DMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGS 310
+M++G ++P+ I SVL A + L LE G+ VH K+ + +
Sbjct: 410 SYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNN 469
Query: 311 AVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
+++ MY KCGS+E A +F +E ++ ITW+ +I G A +G DA Y+ M+
Sbjct: 470 SLVTMYTKCGSLEDANVIFNSME-IRDLITWTCLIVGYAKNGLLEDAQRYFDSMR----- 523
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXX 430
VY GI P EHY CM+D
Sbjct: 524 ---TVY---------------------------GITPGPEHYACMIDLFGRSGDFVKVEQ 553
Query: 431 XVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGN 490
+ M + PD +WKA+L A + HGN++ GER A+TLM+L P+++ YV LSN++++ G
Sbjct: 554 LLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGR 613
Query: 491 WVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRS 550
VR MK ++ K+PGCSW+E G +H F+ ED HPR EI S ++E+ I+
Sbjct: 614 QDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKE 673
Query: 551 AGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSS 610
AGY +++ L ++D+E KE L YHSE++A+AFGL+ P+RI+KNLRVC DCHS+
Sbjct: 674 AGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSA 733
Query: 611 IKLI 614
+KL+
Sbjct: 734 MKLL 737
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 54/324 (16%)
Query: 58 LSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGL 117
++ S+ R L A K F N SWN +I + ++ + +EA F +M S+G
Sbjct: 67 VAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSG-----SKVEAFNLFWEMQSDG- 120
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
++PN +T SVL+ C + + G++IHG +K G D D V + L+ MYA C + +A
Sbjct: 121 IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAE 180
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV 237
LF EG +++ V
Sbjct: 181 YLFET------------------MEG-----------------------------EKNNV 193
Query: 238 SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYA 297
+W M++GY+QNGF +A++ F D++ N T SVL A + + A +G VH
Sbjct: 194 TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCI 253
Query: 298 EKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDA 357
K+ + + + SA+IDMYAKC +E A + E +E + ++W+++I G G +A
Sbjct: 254 VKSGFKTNIYVQSALIDMYAKCREMESARALLEGME-VDDVVSWNSMIVGCVRQGLIGEA 312
Query: 358 LDYYRKMQQAGVTPTDVVYIGLLS 381
L + +M + + D +L+
Sbjct: 313 LSMFGRMHERDMKIDDFTIPSILN 336
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 128/258 (49%), Gaps = 4/258 (1%)
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDV 258
+M E WN MI + + + KLF P ++ +SWN +ISGY ++G EA ++
Sbjct: 53 KMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNL 112
Query: 259 FHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAK 318
F +MQ + PN TL SVL + L L G+ +H + K ++D + + ++ MYA+
Sbjct: 113 FWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQ 172
Query: 319 CGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIG 378
C + +A +FE +E +KN +TW++++ G + +G A A++ +R +++ G +
Sbjct: 173 CKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPS 232
Query: 379 LLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIR 438
+L+AC+ G + +VK G + + ++D + M +
Sbjct: 233 VLTACASVSACRVGVQVHCCIVK-SGFKTNIYVQSALIDMYAKCREMESARALLEGMEV- 290
Query: 439 PDDVI-WKALLGACKMHG 455
DDV+ W +++ C G
Sbjct: 291 -DDVVSWNSMIVGCVRQG 307
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 266/487 (54%), Gaps = 28/487 (5%)
Query: 31 QLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRA 90
+L +IHAH ++ L G L A + D YA + F+ + NPN +N +I+
Sbjct: 19 RLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSD--YANRVFSHIQNPNVLVFNAMIKC 76
Query: 91 FAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVK 150
++ PLE+L FF M S G + + +T+ +LK+C+ + ++ GK +HG +++
Sbjct: 77 YSLVGP-----PLESLSFFSSMKSRG-IWADEYTYAPLLKSCSSLSDLRFGKCVHGELIR 130
Query: 151 LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNV 210
G + +V +Y G M DA +F M E VV+WN+
Sbjct: 131 TGFHRLGKIRIGVVELYTSGGRMGDAQKVFD-----------------EMSERNVVVWNL 173
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPN 270
MI GF GD+ LF +M +RS+VSWN MIS ++ G +EA+++F +M P+
Sbjct: 174 MIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPD 233
Query: 271 YITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV-LGSAVIDMYAKCGSVEKAIQVF 329
T+V+VLP + LG L+ GKW+H AE + + D + +G+A++D Y K G +E A +F
Sbjct: 234 EATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG-VTPTDVVYIGLLSACSHAGL 388
K++ ++N ++W+ +I G A++G+ +D + M + G V P + ++G+L+ CS+ G
Sbjct: 294 RKMQ-RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQ 352
Query: 389 IEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALL 448
+E G LF M++ +E R EHYG MVD + NMP+ + +W +LL
Sbjct: 353 VERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLL 412
Query: 449 GACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRK 508
AC+ HG+VK+ E A L+K+ P +SG+YV LSN++A G W V +VR MK+ +RK
Sbjct: 413 SACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRK 472
Query: 509 DPGCSWI 515
G S I
Sbjct: 473 STGQSTI 479
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 171/563 (30%), Positives = 296/563 (52%), Gaps = 75/563 (13%)
Query: 56 KFLSVSDRR-DLKYARKFFTQM-NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMC 113
KFL +S + YARK F Q + F N++I+A+ ET + ++ + +
Sbjct: 15 KFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLET-----RQYPDSFALYRDLR 69
Query: 114 SEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAM---- 169
E P+ FTF ++ K+C+ + +G ++H + + G D +V++ +V MYA
Sbjct: 70 KETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKM 129
Query: 170 ---------------------------CGVMEDAYLLFSN----------------YVSH 186
CG ++ A LF +V
Sbjct: 130 GCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKS 189
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGY 246
D S + + ++ M V+ W MI G+ + DI A+RKLF+ MP+R++VSWN MI GY
Sbjct: 190 GDMTSARRLFDE-MTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGY 248
Query: 247 AQNGFFKEAMDVFHDMQ-MGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEID 305
QN +E + +F +MQ + P+ +T++SVLPAIS GAL LG+W H + ++ +++
Sbjct: 249 CQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKK 308
Query: 306 DVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQ 365
+ +A++DMY+KCG +EKA ++F+++ K+ A +W+A+I G A++G A ALD + M
Sbjct: 309 VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVA-SWNAMIHGYALNGNARAALDLFVTMM 367
Query: 366 QAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXX 425
P ++ + +++AC+H GL+EEGR F H+++ +G+ ++EHYGCMVD
Sbjct: 368 -IEEKPDEITMLAVITACNHGGLVEEGRKWF-HVMREMGLNAKIEHYGCMVDLLGRAGSL 425
Query: 426 XXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIF 485
+ NMP P+ +I + L AC + +++ ER+ + ++L P + G+YV L N++
Sbjct: 426 KEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLY 485
Query: 486 ASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEIS 545
A+ W V+ M++ +K+ GCS IEI+ ++ EF+ D +HP + I +L ++
Sbjct: 486 AADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDL- 544
Query: 546 NRIRSAGYRPNITQVLLNMDEEK 568
L++M+EEK
Sbjct: 545 ---------------LMHMNEEK 552
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 144/346 (41%), Gaps = 66/346 (19%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTG------LIGDPLAAAEILKFLSV----SDRRDL 66
S LF Q+ K + + F+K+G + D + ++ + ++ + +D+
Sbjct: 164 SKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDI 223
Query: 67 KYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFP 126
ARK F M N SWNT+I + + K P E + F +M + ++P+ T
Sbjct: 224 DAARKLFDAMPERNLVSWNTMIGGYCQN-----KQPQEGIRLFQEMQATTSLDPDDVTIL 278
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
SVL A + G + G+ H FV + LD V + ++ MY+ CG +E A +F
Sbjct: 279 SVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFD----- 333
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGY 246
M E V WN MI GY
Sbjct: 334 ------------EMPEKQVASWNAMI-------------------------------HGY 350
Query: 247 AQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIEID 305
A NG + A+D+F M M + P+ IT+++V+ A + G +E G KW H+ E
Sbjct: 351 ALNGNARAALDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKI 409
Query: 306 DVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMH 351
+ G ++D+ + GS+++A + + + N I S+ + +
Sbjct: 410 EHYG-CMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQY 454
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 182/570 (31%), Positives = 281/570 (49%), Gaps = 55/570 (9%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTG-----------LIGDPLAAAEILKFLSVSDRRD 65
+SL Q KS+KQ K IH H TG LIG + + + V D+
Sbjct: 50 ASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109
Query: 66 LK-------------------YARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEAL 106
L+ AR F M + SWNT++ +A+ N EAL
Sbjct: 110 LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDG-----NLHEAL 164
Query: 107 GFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRM 166
F+ + G ++ N F+F +L AC K ++Q ++ HG V+ G ++ ++ +++
Sbjct: 165 WFYKEFRRSG-IKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 167 YAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRK 226
YA CG ME A F D + K + +W +I G+ +LGD+ A+ K
Sbjct: 224 YAKCGQMESAKRCF-------DEMTVKDIH----------IWTTLISGYAKLGDMEAAEK 266
Query: 227 LFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGA 286
LF +MP+++ VSW +I+GY + G A+D+F M V P T S L A + + +
Sbjct: 267 LFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIAS 326
Query: 287 LELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIG 346
L GK +H Y + + + ++ S++IDMY+K GS+E + +VF ++K + + W+ +I
Sbjct: 327 LRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMIS 386
Query: 347 GLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIE 406
LA HG + AL M + V P + +L+ACSH+GL+EEG F M GI
Sbjct: 387 ALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIV 446
Query: 407 PRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVART 466
P EHY C++D + MP PD IW A+LG C++HGN ++G++ A
Sbjct: 447 PDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADE 506
Query: 467 LMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLV 526
L+KL P S Y+ LS+I+A G W V ++R MK+ V K+ SWIEI+ + F V
Sbjct: 507 LIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTV 566
Query: 527 EDESHPRAK--EIRSMLEEISNRIRSAGYR 554
D SH A+ EI +L ++ I R
Sbjct: 567 SDGSHAHARKEEIYFILHNLAAVIEEEASR 596
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 270/505 (53%), Gaps = 40/505 (7%)
Query: 26 CKSIKQLKQIHAHFIKTGLIGDPLA-----AAEILKFLSVS-----DRRDLKYARKFFTQ 75
C+++K L Q HA FI +G I + A + S+S + + YA F
Sbjct: 14 CRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRF 73
Query: 76 MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACA-- 133
+ NP+ F +NTIIR + + L + FF +M V P+ TFP V KACA
Sbjct: 74 ITNPSTFCFNTIIRICTLHE----PSSLSSKRFFVEMRRRS-VPPDFHTFPFVFKACAAK 128
Query: 134 KMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTK 193
K G + K +H ++ GL +D F + L+R+Y++ ++ A LF D N +
Sbjct: 129 KNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLF-------DENPQR 181
Query: 194 LVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFK 253
VV +NV+IDG V+ +I +R+LF+ MP R +VSWN +ISGYAQ +
Sbjct: 182 ----------DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCR 231
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVI 313
EA+ +F +M + P+ + +VS L A ++ G + GK +H Y ++ + ID L + ++
Sbjct: 232 EAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLV 291
Query: 314 DMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTD 373
D YAKCG ++ A+++FE + + K TW+A+I GLAMHG +DY+RKM +G+ P
Sbjct: 292 DFYAKCGFIDTAMEIFE-LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDG 350
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVL 433
V +I +L CSH+GL++E R+LF+ M + + ++HYGCM D +
Sbjct: 351 VTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIE 410
Query: 434 NMPI----RPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRG 489
MP R + W LLG C++HGN+++ E+ A + L P D G Y + ++A+
Sbjct: 411 QMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAE 470
Query: 490 NWVGVVEVR-LKMKEMDVRKDPGCS 513
W VV+VR + ++ V+K+ G S
Sbjct: 471 RWEEVVKVREIIDRDKKVKKNVGFS 495
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 250/451 (55%), Gaps = 8/451 (1%)
Query: 201 QEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFK 253
+EG+ + WN + G+ LG + + KM ++ +VVSW + SG ++NG F+
Sbjct: 51 KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFR 110
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVI 313
A+ VF MQ V PN T+ ++L + L L GK VH + + + D + +A++
Sbjct: 111 NALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALV 170
Query: 314 DMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTD 373
DMY K G ++ AI++F I+NK A +W+ ++ G AM GR + + + M +AG+ P
Sbjct: 171 DMYGKSGDLQSAIEIFWGIKNKSLA-SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDA 229
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVL 433
+ + +LS C ++GL++EG F+ M GI P +EH CMVD +
Sbjct: 230 ITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQ 289
Query: 434 NMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVG 493
M ++PD IW A L +CK+H ++++ E + L L PH+S +Y+ + N++++ W
Sbjct: 290 TMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWED 349
Query: 494 VVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGY 553
V +R M+ VR SWI+ID +H F E ++HP +I L ++ + ++ +GY
Sbjct: 350 VERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGY 409
Query: 554 RPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKL 613
P+ + + ++ + +KE L H+E++A+ +GLI + P+R+VKN +C D H+ K
Sbjct: 410 VPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKY 469
Query: 614 ISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+S + R+I++++ R HHF G CSC D W
Sbjct: 470 MSVLRNREIVLQEGARVHHFRDGKCSCNDSW 500
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 146/342 (42%), Gaps = 34/342 (9%)
Query: 39 FIKTG------LIGDPLAAAEILKFLSVSDRRD----LKYARKFFTQMNN----PNCFSW 84
+IKTG ++ D + A I+ + S+ LK A +M P+ +W
Sbjct: 2 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW 61
Query: 85 NTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEI 144
N++ +A P +AL G+M +G V PN ++ ++ C+K G + ++
Sbjct: 62 NSLASGYATLG-----KPEKALDVIGKMKEKG-VAPNVVSWTAIFSGCSKNGNFRNALKV 115
Query: 145 HGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGV 204
+K+ +E V N M + ++ LL S H L+ + + +
Sbjct: 116 ---FIKM---QEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATAL 169
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
V D + + GD+ ++ ++F + +S+ SWN M+ GYA G +E + F M
Sbjct: 170 V-------DMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLE 222
Query: 265 GDVSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
+ P+ IT SVL G ++ G K+ L + I S ++D+ + G ++
Sbjct: 223 AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLD 282
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQ 365
+A + + K +A W A + +H A ++++Q
Sbjct: 283 EAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQ 324
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 285 bits (728), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 177/598 (29%), Positives = 300/598 (50%), Gaps = 63/598 (10%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
+SL A ++ Q H+ IK L + ++ + L+ AR+ F +M
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA--LEDARQIFERM 489
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
+ + +WNTII ++ + + N EA F +M G+V S LKAC +
Sbjct: 490 CDRDNVTWNTIIGSYVQDE-----NESEAFDLFKRMNLCGIVSDGA-CLASTLKACTHVH 543
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGV------------------------ 172
+ +GK++H VK GLD D S+L+ MY+ CG+
Sbjct: 544 GLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIA 603
Query: 173 ------MEDAYLLFSNYVSHFDNNSTKLV--------RNKRMQEGVVVLWNVMIDGFVRL 218
+E+A +LF ++ N S + + + G + GF
Sbjct: 604 GYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663
Query: 219 GD-IGASR--------------KLFNKMPQ-RSVVSWNVMISGYAQNGFFKEAMDVFHDM 262
G+ +G S LF+++ +S+V W M+SG++QNGF++EA+ + +M
Sbjct: 664 GEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
+ V P+ T V+VL S L +L G+ +H ++D++ + +IDMYAKCG +
Sbjct: 724 RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 323 EKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
+ + QVF+++ + N ++W+++I G A +G A DAL + M+Q+ + P ++ ++G+L+A
Sbjct: 784 KGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTA 843
Query: 383 CSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV 442
CSHAG + +GR +F M+ GIE RV+H CMVD + ++PD
Sbjct: 844 CSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 443 IWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMK 502
+W +LLGAC++HG+ GE A L++L P +S +YV LSNI+AS+G W +R M+
Sbjct: 904 LWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMR 963
Query: 503 EMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR-SAGYRPNITQ 559
+ V+K PG SWI+++ H F D+SH +I LE++ + ++ A P+I +
Sbjct: 964 DRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNPDIVE 1021
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 181/354 (51%), Gaps = 26/354 (7%)
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
+ YA K F + + +WN+++ ++ P + L F + E + PN+FTF
Sbjct: 111 VSYAEKQFDFLEK-DVTAWNSMLSMYSSIG-----KPGKVLRSFVSLF-ENQIFPNKFTF 163
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDA--------- 176
VL CA+ ++ G++IH ++K+GL+ + + LV MYA C + DA
Sbjct: 164 SIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD 223
Query: 177 ------YLLFSNYVSHFDNNSTKLVRNKRMQEGVV---VLWNVMIDGFVRLGDIGASRKL 227
LFS YV LV + EG + + +I+ ++RLG + +R L
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLL 283
Query: 228 FNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGAL 287
F +M VV+WNVMISG+ + G A++ F +M+ V TL SVL AI + L
Sbjct: 284 FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 288 ELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGG 347
+LG VH A K + + +GS+++ MY+KC +E A +VFE +E +KN + W+A+I G
Sbjct: 344 DLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKNDVFWNAMIRG 402
Query: 348 LAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
A +G ++ ++ + M+ +G D + LLS C+ + +E G + ++K
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 154/336 (45%), Gaps = 55/336 (16%)
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
LK AR F +M++P+ +WN +I + + A+ +F M + V+ R T
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV-----AIEYFFNM-RKSSVKSTRSTL 330
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVS 185
SVL A + + G +H +KLGL ++ +V S+LV MY+ C ME
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME----------- 379
Query: 186 HFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISG 245
A+ K+F + +++ V WN MI G
Sbjct: 380 -------------------------------------AAAKVFEALEEKNDVFWNAMIRG 402
Query: 246 YAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEID 305
YA NG + M++F DM+ + + T S+L + LE+G H K ++ +
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 306 DVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQ 365
+G+A++DMYAKCG++E A Q+FE++ ++ N +TW+ IIG ++A D +++M
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGSYVQDENESEAFDLFKRMN 521
Query: 366 QAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
G+ L AC+H + +G+ + VK
Sbjct: 522 LCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 185/420 (44%), Gaps = 73/420 (17%)
Query: 35 IHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAET 94
+HA IK GL + + ++ S ++ ++ A K F + N WN +IR +A
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEK--MEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 95 DDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLD 154
+ + + F M S G + FTF S+L CA ++ G + H ++K L
Sbjct: 407 GESH-----KVMELFMDMKSSGY-NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 155 NDEFVASNLVRMYA---------------------------------------------- 168
+ FV + LV MYA
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 169 -MCGVMEDAYLLFSNY--VSHFDNN---------STKLVRNKRMQEGVVVLWNVMIDGFV 216
+CG++ D L S +H S K ++ + G + +ID +
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTG-----SSLIDMYS 575
Query: 217 RLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVS 276
+ G I +RK+F+ +P+ SVVS N +I+GY+QN +EA+ +F +M V+P+ IT +
Sbjct: 576 KCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFAT 634
Query: 277 VLPAISRLGALELGKWVHLYAEKNEIEID-DVLGSAVIDMYAKCGSVEKAIQVFEKIENK 335
++ A + +L LG H K + + LG +++ MY + +A +F ++ +
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP 694
Query: 336 KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSL 395
K+ + W+ ++ G + +G +AL +Y++M+ GV P ++ +L CS + EGR++
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 157/353 (44%), Gaps = 69/353 (19%)
Query: 11 TRPTHPSSL-FPQIARC----KSIKQLKQIHAHFIKTGLI--GDPLAAAEILKFLSVSDR 63
TR +PS + F I +S+ Q H K G G+ L + + ++ +
Sbjct: 622 TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYM---NS 678
Query: 64 RDLKYARKFFTQMNNPNCFS-WNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNR 122
R + A F+++++P W ++ ++ + EAL F+ +M +G++ P++
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYE-----EALKFYKEMRHDGVL-PDQ 732
Query: 123 FTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSN 182
TF +VL+ C+ + ++EG+ IH + L D DE ++ L+ MYA CG M+ + +F
Sbjct: 733 ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF-- 790
Query: 183 YVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVM 242
++ + VV WN +I+G+
Sbjct: 791 --------------DEMRRRSNVVSWNSLINGY--------------------------- 809
Query: 243 ISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVH---LYAEK 299
A+NG+ ++A+ +F M+ + P+ IT + VL A S G + G+ + +
Sbjct: 810 ----AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYG 865
Query: 300 NEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHG 352
E +D V + ++D+ + G +++A E K +A WS+++G +HG
Sbjct: 866 IEARVDHV--ACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHG 916
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 286 ALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAII 345
AL +GK VH + I+ + LG+A++D+YAKC V A + F+ +E K+ W++++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE--KDVTAWNSML 132
Query: 346 GGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGI 405
+ G+ L + + + + P + +LS C+ +E GR + M+K +G+
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGL 191
Query: 406 EPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMG 460
E G +VD V + P+ V W C G VK G
Sbjct: 192 ERNSYCGGALVD-MYAKCDRISDARRVFEWIVDPNTVCW-----TCLFSGYVKAG 240
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 271/534 (50%), Gaps = 39/534 (7%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
S +F A K + + QI+ IK+ L D A + + L A + F +M
Sbjct: 344 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKC--QALAEAFRVFDEM 401
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
+ SWN II A E + Y E L F M +EP+ FTF S+LKAC G
Sbjct: 402 RRRDAVSWNAIIAAH-EQNGKGY----ETLFLFVSML-RSRIEPDEFTFGSILKACTG-G 454
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVR 196
+ G EIH +VK G+ ++ V +L+ MY+ CG++E+A + S + + + T
Sbjct: 455 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT---- 510
Query: 197 NKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAM 256
M+E K+ NK Q VSWN +ISGY ++A
Sbjct: 511 ---MEE---------------------LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 546
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
+F M ++P+ T +VL + L + LGK +H K E++ D + S ++DMY
Sbjct: 547 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 606
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
+KCG + + +FEK +++ +TW+A+I G A HG+ +A+ + +M + P V +
Sbjct: 607 SKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 665
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
I +L AC+H GLI++G F M + G++P++ HY MVD + MP
Sbjct: 666 ISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP 725
Query: 437 IRPDDVIWKALLGACKMH-GNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVV 495
DDVIW+ LLG C +H NV++ E L++L P DS +Y LSN++A G W V
Sbjct: 726 FEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVS 785
Query: 496 EVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR 549
++R M+ ++K+PGCSW+E+ +H FLV D++HPR +EI L I + ++
Sbjct: 786 DLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 839
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 135/270 (50%), Gaps = 18/270 (6%)
Query: 132 CAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNS 191
CAK G ++ GK+ H ++ G FV + L+++Y A ++F
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD---------- 65
Query: 192 TKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
+M VV WN MI+G+ + D+ + FN MP R VVSWN M+SGY QNG
Sbjct: 66 -------KMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGE 118
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
++++VF DM + + T +L S L LG +H + + D V SA
Sbjct: 119 SLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASA 178
Query: 312 VIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
++DMYAK ++++VF+ I +KN+++WSAII G + + AL ++++MQ+
Sbjct: 179 LLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 237
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+ +Y +L +C+ + G L H +K
Sbjct: 238 SQSIYASVLRSCAALSELRLGGQLHAHALK 267
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 193/466 (41%), Gaps = 92/466 (19%)
Query: 22 QIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNC 81
+ A+ +++ KQ HAH I +G +L+ + S RD A F +M +
Sbjct: 15 ECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNS--RDFVSASMVFDKMPLRDV 72
Query: 82 FSWNTIIRAFAETDDDDYKNP--------------------------LEALGFFGQMCSE 115
SWN +I +++++D N L+++ F M E
Sbjct: 73 VSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 132
Query: 116 GLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMED 175
G +E + TF +LK C+ + G +IHG VV++G D D AS L+ MYA
Sbjct: 133 G-IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYA------- 184
Query: 176 AYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS 235
+ KR E S ++F +P+++
Sbjct: 185 --------------------KGKRFVE---------------------SLRVFQGIPEKN 203
Query: 236 VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL 295
VSW+ +I+G QN A+ F +MQ + + SVL + + L L LG +H
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 263
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAN 355
+A K++ D ++ +A +DMYAKC +++ A +F+ EN N +++A+I G +
Sbjct: 264 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN-LNRQSYNAMITGYSQEEHGF 322
Query: 356 DALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK------VVGIEPRV 409
AL + ++ +G+ ++ G+ AC+ + EG ++ +K V +
Sbjct: 323 KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAI 382
Query: 410 EHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHG 455
+ YG V + R D V W A++ A + +G
Sbjct: 383 DMYG--------KCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 420
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 186/684 (27%), Positives = 326/684 (47%), Gaps = 64/684 (9%)
Query: 14 THPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILK-FLSVSDRRDLKYARKF 72
T+P + +A S+++ K+IHA IK G + D ++ ++ + D A K
Sbjct: 132 TYPF-VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD---AEKV 187
Query: 73 FTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
F +M + SWN++I + D +L F +M G +P+RF+ S L AC
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDG-----FSSLMLFKEMLKCGF-KPDRFSTMSALGAC 241
Query: 133 AKMGRIQEGKEIHGFVVKLGLDN-DEFVASNLVRMY------------------------ 167
+ + + GKEIH V+ ++ D V ++++ MY
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301
Query: 168 -------AMCGVMEDAYLLFS----------------NYVSHFDNNSTKLVRNKRMQEGV 204
A G + DA+L F N + + + M+ G
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGF 361
Query: 205 V---VLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHD 261
+ VL +ID + G + ++ +F++M +++V+SWN +I+ Y QNG A+++F +
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE 421
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
+ + P+ T+ S+LPA + +L G+ +H Y K+ + ++ ++++ MYA CG
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
+E A + F I K+ ++W++II A+HG ++ + +M + V P + LL+
Sbjct: 482 LEDARKCFNHIL-LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 540
Query: 382 ACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDD 441
ACS +G+++EG F M + GI+P +EHYGCM+D + MP P
Sbjct: 541 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTA 600
Query: 442 VIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKM 501
IW +LL A + H ++ + E A + K+ ++G YV L N++A G W V ++L M
Sbjct: 601 RIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLM 660
Query: 502 KEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAG-YRPNITQV 560
+ + + S +E G H F D SH +I +L+ +S + Y ++++
Sbjct: 661 ESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRL 720
Query: 561 LLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKR 620
+ + ++ HS R+A FGLIST + + N R+C CH ++ S + +R
Sbjct: 721 RPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRR 780
Query: 621 KIIVRDRKRFHHFEKGVCSCMDYW 644
+I+V D K FHHF G CSC +YW
Sbjct: 781 EIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 180/362 (49%), Gaps = 64/362 (17%)
Query: 42 TGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKN 101
T + DP + F +D R ++ A + F +MN + F WN +I+ F T Y
Sbjct: 59 TKQVNDPALTRALRGF---ADSRLMEDALQLFDEMNKADAFLWNVMIKGF--TSCGLY-- 111
Query: 102 PLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVAS 161
+EA+ F+ +M G V+ + FT+P V+K+ A + ++EGK+IH V+KLG +D +V
Sbjct: 112 -IEAVQFYSRMVFAG-VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVC- 168
Query: 162 NLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDI 221
N +I +++LG
Sbjct: 169 -----------------------------------------------NSLISLYMKLGCA 181
Query: 222 GASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAI 281
+ K+F +MP+R +VSWN MISGY G ++ +F +M P+ + +S L A
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Query: 282 SRLGALELGKWVHLYAEKNEIEIDDVL-GSAVIDMYAKCGSVEKAIQVFEKIENKKNAIT 340
S + + ++GK +H +A ++ IE DV+ ++++DMY+K G V A ++F + ++N +
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMI-QRNIVA 300
Query: 341 WSAIIGGLAMHGRANDALDYYRKM-QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
W+ +IG A +GR DA ++KM +Q G+ P + I LL A + I EGR++ +
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYA 356
Query: 400 VK 401
++
Sbjct: 357 MR 358
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 258/504 (51%), Gaps = 61/504 (12%)
Query: 26 CKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWN 85
C SIK L QIH + L D +E+++ S+S +DL +AR ++ +WN
Sbjct: 23 CSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWN 82
Query: 86 TIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIH 145
+ R ++ +D +P+E++ + +M G ++PN+ TFP +LKACA + G++I
Sbjct: 83 MLSRGYSSSD-----SPVESIWVYSEMKRRG-IKPNKLTFPFLLKACASFLGLTAGRQIQ 136
Query: 146 GFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVV 205
V+K G D D +V +NL+ +Y C DA
Sbjct: 137 VEVLKHGFDFDVYVGNNLIHLYGTCKKTSDA----------------------------- 167
Query: 206 VLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMG 265
RK+F++M +R+VVSWN +++ +NG + F +M
Sbjct: 168 -------------------RKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGK 208
Query: 266 DVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKA 325
P+ T+V +L A G L LGK VH E+E++ LG+A++DMYAK G +E A
Sbjct: 209 RFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYA 266
Query: 326 IQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM-QQAGVTPTDVVYIGLLSACS 384
VFE++ +K N TWSA+I GLA +G A +AL + KM +++ V P V ++G+L ACS
Sbjct: 267 RLVFERMVDK-NVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACS 325
Query: 385 HAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIW 444
H GL+++G F+ M K+ I+P + HYG MVD + MP PD V+W
Sbjct: 326 HTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVW 385
Query: 445 KALLGACKMH---GNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKM 501
+ LL AC +H + +GE+V + L++L P SG+ V ++N FA W EVR M
Sbjct: 386 RTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVM 445
Query: 502 KEMDVRKDPGCSWIEIDGVIHEFL 525
KE ++K G S +E+ G H F
Sbjct: 446 KETKMKKIAGESCLELGGSFHRFF 469
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 283/539 (52%), Gaps = 65/539 (12%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILK-FLSVSD-RRDLKYARKFFTQ 75
SL RC ++KQ+K H+ FI GL + A +++L FL + + + YA F
Sbjct: 13 SLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 76 MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGL--VEPNRFTFPSVLKACA 133
+ PN F ++T+IR + + P L +F M E + P+ TF ++ AC
Sbjct: 73 IEIPNSFVYDTMIRICSRSS-----QPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACL 127
Query: 134 KMGRIQEGKEIHGFVVKLGLD-NDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNST 192
K GK+IH +VVK G+ +D V + ++R+Y +ED L FD
Sbjct: 128 KACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIY-----VEDKLL--------FD---- 170
Query: 193 KLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFF 252
+RK+F+++PQ VV W+V+++GY + G
Sbjct: 171 -------------------------------ARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 253 KEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNE-IEIDDVLGSA 311
E ++VF +M + + P+ ++ + L A +++GAL GKW+H + +K IE D +G+A
Sbjct: 200 SEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTA 259
Query: 312 VIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQ-QAGVT 370
++DMYAKCG +E A++VFEK+ ++N +W+A+IGG A +G A A +++ + G+
Sbjct: 260 LVDMYAKCGCIETAVEVFEKL-TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIK 318
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXX 430
P VV +G+L+AC+H G +EEGR++ +M GI P+ EHY C+VD
Sbjct: 319 PDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALD 378
Query: 431 XVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKL----FPHDSGSYVALSNIFA 486
+ MP++P +W ALL C+ H NV++GE + L+ L + + V LSNI+
Sbjct: 379 LIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYF 438
Query: 487 SRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEIS 545
S +VR +++ +RK PG S +E+DG++ +F+ D SHP +I +++ +S
Sbjct: 439 SVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLS 497
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 175/560 (31%), Positives = 283/560 (50%), Gaps = 73/560 (13%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFL--SVSDRRDLKYARKFFTQMNNPN 80
+ +C S+ QL+QI A + L + E FL + D Y+ F+ PN
Sbjct: 40 LKKCISVNQLRQIQAQML--------LHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPN 91
Query: 81 CFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQE 140
+S+N +IR T +D AL + +M GL +P++FT+ V ACAK+ I
Sbjct: 92 HYSFNYMIRGLTNTWNDHEA----ALSLYRRMKFSGL-KPDKFTYNFVFIACAKLEEIGV 146
Query: 141 GKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH-------------- 186
G+ +H + K+GL+ D + +L+ MYA CG + A LF
Sbjct: 147 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 206
Query: 187 ------------------FDNNSTKLV------------RNKRMQEGVVV---------L 207
F+ + LV R R+ E + + L
Sbjct: 207 AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFL 266
Query: 208 WNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDV 267
+ +I + + GD+ ++R++FN+M ++ V+W MI+ Y+QNG EA +F +M+ V
Sbjct: 267 GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 326
Query: 268 SPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQ 327
SP+ TL +VL A +GALELGK + +A + ++ + + + ++DMY KCG VE+A++
Sbjct: 327 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 386
Query: 328 VFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAG 387
VFE + KN TW+A+I A G A +AL + +M V P+D+ +IG+LSAC HAG
Sbjct: 387 VFEAMP-VKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACVHAG 442
Query: 388 LIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKAL 447
L+ +G F+ M + G+ P++EHY ++D + P +PD+++ A+
Sbjct: 443 LVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAI 502
Query: 448 LGACKMHGNVKMGERVARTLMKLF-PHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDV 506
LGAC +V + E+ R LM++ ++G+YV SN+ A W ++R M++ V
Sbjct: 503 LGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGV 562
Query: 507 RKDPGCSWIEIDGVIHEFLV 526
K PGCSWIEI+G + EFL
Sbjct: 563 VKTPGCSWIEIEGELMEFLA 582
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 255/511 (49%), Gaps = 56/511 (10%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
QIH IK+ L G+ +A + + L AR+ F Q+ P+ SWN II A
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGF--LNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 94 TDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGL 153
D EA+ F QM S G + P+ + S+L A K + +G +IH +++K G
Sbjct: 349 NGYAD-----EAVSVFSQMRSSGFI-PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF 402
Query: 154 DNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMID 213
D V ++L+ MY C D Y F N F NN+
Sbjct: 403 LADLTVCNSLLTMYTFCS---DLYCCF-NLFEDFRNNADS-------------------- 438
Query: 214 GFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYIT 273
VSWN +++ Q+ E + +F M + + P++IT
Sbjct: 439 -----------------------VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 274 LVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE 333
+ ++L + +L+LG VH Y+ K + + + + +IDMYAKCGS+ +A ++F+ ++
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD 535
Query: 334 NKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGR 393
N+ + ++WS +I G A G +AL +++M+ AG+ P V ++G+L+ACSH GL+EEG
Sbjct: 536 NR-DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGL 594
Query: 394 SLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKM 453
L+ M GI P EH C+VD + M + PD V+WK LL ACK
Sbjct: 595 KLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKT 654
Query: 454 HGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCS 513
GNV + ++ A ++K+ P +S ++V L ++ AS GNW +R MK+ DV+K PG S
Sbjct: 655 QGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Query: 514 WIEIDGVIHEFLVEDESHPRAKEIRSMLEEI 544
WIEI+ IH F ED HP +I ++L I
Sbjct: 715 WIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 173/385 (44%), Gaps = 58/385 (15%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
SL + +S+ Q ++IH H + + D + IL L+ AR+ F M
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCG--SLRDAREVFDFMP 129
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
N S+ ++I +++ EA+ + +M E LV P++F F S++KACA
Sbjct: 130 ERNLVSYTSVITGYSQNGQG-----AEAIRLYLKMLQEDLV-PDQFAFGSIIKACASSSD 183
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
+ GK++H V+KL + + L+ MY M DA
Sbjct: 184 VGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDA--------------------- 222
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
++F +P + ++SW+ +I+G++Q GF EA+
Sbjct: 223 ---------------------------SRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 258 VFHDM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
+M G PN S L A S L + G +H K+E+ + + G ++ DMY
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
A+CG + A +VF++IE A +W+ II GLA +G A++A+ + +M+ +G P +
Sbjct: 316 ARCGFLNSARRVFDQIERPDTA-SWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVK 401
LL A + + +G + ++++K
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIK 399
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 64/345 (18%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM- 76
SL + ++ Q QIH++ IK G + D +L + DL F
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS--DLYCCFNLFEDFR 433
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQM-CSEGLVEPNRFTFPSVLKACAKM 135
NN + SWNTI+ A + ++ P+E L F M SE EP+ T ++L+ C ++
Sbjct: 434 NNADSVSWNTILTACLQ-----HEQPVEMLRLFKLMLVSE--CEPDHITMGNLLRGCVEI 486
Query: 136 GRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLV 195
++ G ++H + +K GL ++F+ + L+ MYA CG + A +F + DN
Sbjct: 487 SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS----MDNRD---- 538
Query: 196 RNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEA 255
VV W + +I GYAQ+GF +EA
Sbjct: 539 ---------VVSW-------------------------------STLIVGYAQSGFGEEA 558
Query: 256 MDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYA---EKNEIEIDDVLGSAV 312
+ +F +M+ + PN++T V VL A S +G +E G + LYA ++ I S V
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG--LKLYATMQTEHGISPTKEHCSCV 616
Query: 313 IDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDA 357
+D+ A+ G + +A + ++++ + + + W ++ G + A
Sbjct: 617 VDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLA 661
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
+L N ++ + + G + +R++F+ MP+R++VS+ +I+GY+QNG EA+ ++ M
Sbjct: 102 TILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ 161
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEK 324
D+ P+ S++ A + + LGK +H K E + +A+I MY + +
Sbjct: 162 EDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSD 221
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV-TPTDVVYIGLLSAC 383
A +VF I K+ I+WS+II G + G +AL + ++M GV P + ++ L AC
Sbjct: 222 ASRVFYGIP-MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 280
Query: 384 SHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVI 443
S + G + +K + GC + V + RPD
Sbjct: 281 SSLLRPDYGSQIHGLCIKSELAGNAIA--GCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 444 WKALLGACKMHG 455
W ++ +G
Sbjct: 339 WNVIIAGLANNG 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 240 NVMISGYAQNGFFKEAMDVFHDMQM-GDVSPNYITLVSVLPAISRLGALELGKWVHLYAE 298
N I+ ++ F++EA++ F Q T +S++ A S +L G+ +H +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 299 KNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDAL 358
+ + D +L + ++ MY KCGS+ A +VF+ + ++N ++++++I G + +G+ +A+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP-ERNLVSYTSVITGYSQNGQGAEAI 153
Query: 359 DYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV 402
Y KM Q + P + ++ AC+ + + G+ L ++K+
Sbjct: 154 RLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKL 197
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 261/521 (50%), Gaps = 57/521 (10%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+QIH IK GL+G + ++ S + L A K F + N +W+ ++ ++
Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTMYSKCE--SLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+ + LEA+ F +M S G ++P+ +T VL AC+ + ++EGK++H F++KLG
Sbjct: 299 QNGE-----SLEAVKLFSRMFSAG-IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG 352
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
+ F + LV
Sbjct: 353 FERHLFATTALV------------------------------------------------ 364
Query: 213 DGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
D + + G + +RK F+ + +R V W +ISGY QN +EA+ ++ M+ + PN
Sbjct: 365 DMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDP 424
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
T+ SVL A S L LELGK VH + K+ ++ +GSA+ MY+KCGS+E VF +
Sbjct: 425 TMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRT 484
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
N K+ ++W+A+I GL+ +G+ ++AL+ + +M G+ P DV ++ ++SACSH G +E G
Sbjct: 485 PN-KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Query: 393 RSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACK 452
FN M +G++P+V+HY CMVD + + I +W+ LL ACK
Sbjct: 544 WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACK 603
Query: 453 MHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGC 512
HG ++G LM L +S +YV LS I+ + G V V M+ V K+ GC
Sbjct: 604 NHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGC 663
Query: 513 SWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGY 553
SWIE+ H F+V D HP +E + ++ +S ++ G+
Sbjct: 664 SWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGF 704
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 190/408 (46%), Gaps = 60/408 (14%)
Query: 15 HPSSLFPQIARCKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARK 71
H S+L ++ + L + +H I+TG A ++ F + + L A
Sbjct: 13 HTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGK--LAKAHS 70
Query: 72 FFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKA 131
F + + SWN++I +++ + + + F +M ++ ++ PN +T + KA
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQ--NGGISSSYTVMQLFREMRAQDIL-PNAYTLAGIFKA 127
Query: 132 CAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNS 191
+ + G++ H VVK+ D +V ++LV MY G++ED
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL-------------- 173
Query: 192 TKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
K+F MP+R+ +W+ M+SGYA G
Sbjct: 174 ----------------------------------KVFAYMPERNTYTWSTMVSGYATRGR 199
Query: 252 FKEAMDVFHDM--QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG 309
+EA+ VF+ + + S + +VL +++ + LG+ +H KN + L
Sbjct: 200 VEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALS 259
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV 369
+A++ MY+KC S+ +A ++F+ +N+ITWSA++ G + +G + +A+ + +M AG+
Sbjct: 260 NALVTMYSKCESLNEACKMFDS-SGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318
Query: 370 TPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
P++ +G+L+ACS +EEG+ L + ++K +G E + +VD
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATTALVD 365
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 165/388 (42%), Gaps = 64/388 (16%)
Query: 29 IKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTII 88
+++ KQ+H+ +K G A ++ + + L ARK F + + W ++I
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC--LADARKGFDCLQERDVALWTSLI 395
Query: 89 RAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFV 148
+ + D++ EAL + +M + G++ PN T SVLKAC+ + ++ GK++HG
Sbjct: 396 SGYVQNSDNE-----EALILYRRMKTAGII-PNDPTMASVLKACSSLATLELGKQVHGHT 449
Query: 149 VKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLW 208
+K G + + S L MY+ CG +ED L+F +R VV W
Sbjct: 450 IKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF-----------------RRTPNKDVVSW 492
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
N M ISG + NG EA+++F +M +
Sbjct: 493 NAM-------------------------------ISGLSHNGQGDEALELFEEMLAEGME 521
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG--SAVIDMYAKCGSVEKAI 326
P+ +T V+++ A S G +E G W + ++I +D + + ++D+ ++ G +++A
Sbjct: 522 PDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAK 580
Query: 327 QVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
+ E W ++ HG+ + K+ G + Y+ L +
Sbjct: 581 EFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS-TYVQLSGIYTAL 639
Query: 387 GLIEEGRSLFNHMVKVVGIEPRVEHYGC 414
G + + ++ HM + G+ V GC
Sbjct: 640 GRMRDVERVWKHM-RANGVSKEV---GC 663
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 212/346 (61%), Gaps = 7/346 (2%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM-Q 263
V+ WN +++G+ +GD+ A ++F+ MP+R+V SWN +I GYAQNG E + F M
Sbjct: 121 VMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVD 180
Query: 264 MGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEK---NEIEIDDVLGSAVIDMYAKCG 320
G V PN T+ VL A ++LGA + GKWVH Y E N+++++ + +A+IDMY KCG
Sbjct: 181 EGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVN--VKNALIDMYGKCG 238
Query: 321 SVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLL 380
++E A++VF+ I+ +++ I+W+ +I GLA HG +AL+ + +M+ +G++P V ++G+L
Sbjct: 239 AIEIAMEVFKGIK-RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
Query: 381 SACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPD 440
AC H GL+E+G + FN M I P +EH GC+VD + MP++ D
Sbjct: 298 CACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKAD 357
Query: 441 DVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLK 500
VIW LLGA K++ V +GE L+KL P + ++V LSNI+ G + +++
Sbjct: 358 AVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVA 417
Query: 501 MKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISN 546
M++ +K+ G SWIE D + +F E HPR +E++ +L E+ +
Sbjct: 418 MRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILRELKS 463
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 59/295 (20%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
D++ + F M N FSWN +I+ +A+ E LG F +M EG V PN T
Sbjct: 136 DMEACERVFDDMPERNVFSWNGLIKGYAQNG-----RVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDN-DEFVASNLVRMYAMCGVMEDAYLLFSNY 183
VL ACAK+G GK +H + LG + D V + L+ MY CG +E A +F
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVF--- 247
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMI 243
K ++ ++ WN MI+G
Sbjct: 248 --------------KGIKRRDLISWNTMINGL---------------------------- 265
Query: 244 SGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALE--LGKWVHLYAEKNE 301
A +G EA+++FH+M+ +SP+ +T V VL A +G +E L + ++ + +
Sbjct: 266 ---AAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSI 322
Query: 302 I-EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAN 355
+ EI+ V+D+ ++ G + +A++ K+ K +A+ W+ ++G ++ + +
Sbjct: 323 MPEIEHC--GCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVD 375
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 218 LGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNY-ITLVS 276
+G I ++ K+F +M +++VV W MI+GY N A F D+SP I L +
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF------DLSPERDIVLWN 94
Query: 277 VLPAISRLGALELGKWVHLYAEKNEIEIDDVLG-SAVIDMYAKCGSVEKAIQVFEKIENK 335
+ + G +E+G + + +++ DV+ + V++ YA G +E +VF+ + +
Sbjct: 95 TMIS----GYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP-E 149
Query: 336 KNAITWSAIIGGLAMHGRANDALDYYRKMQQAG-VTPTDVVYIGLLSACSHAGLIEEGR 393
+N +W+ +I G A +GR ++ L +++M G V P D +LSAC+ G + G+
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 164/533 (30%), Positives = 263/533 (49%), Gaps = 55/533 (10%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
SS+ A ++ Q+HA+ IK L D ++ + D L ARK F
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC--LTDARKVFDIF 411
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
+ +N +I ++ + EAL F M L+ P+ TF S+L+A A +
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELH--EALNIFRDMRFR-LIRPSLLTFVSLLRASASLT 468
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVR 196
+ K+IHG + K GL+ D F S L+ +Y+ C ++D
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD--------------------- 507
Query: 197 NKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAM 256
SR +F++M + +V WN M +GY Q +EA+
Sbjct: 508 ---------------------------SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEAL 540
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
++F ++Q+ P+ T +++ A L +++LG+ H K +E + + +A++DMY
Sbjct: 541 NLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMY 600
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
AKCGS E A + F+ ++ + + W+++I A HG AL KM G+ P + +
Sbjct: 601 AKCGSPEDAHKAFDSAASR-DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
+G+LSACSHAGL+E+G F M++ GIEP EHY CMV + MP
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 437 IRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVE 496
+P ++W++LL C GNV++ E A + P DSGS+ LSNI+AS+G W +
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKK 778
Query: 497 VRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR 549
VR +MK V K+PG SWI I+ +H FL +D+SH +A +I +L+++ +IR
Sbjct: 779 VRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 160/354 (45%), Gaps = 60/354 (16%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
Q+ + +K+G D ++ F D YAR F + + +W T+I +
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNID--YARLVFDALPEKSTVTWTTMISGCVK 226
Query: 94 TDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGL 153
+L F Q+ + +V P+ + +VL AC+ + ++ GK+IH +++ GL
Sbjct: 227 MG-----RSYVSLQLFYQLMEDNVV-PDGYILSTVLSACSILPFLEGGKQIHAHILRYGL 280
Query: 154 DNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMID 213
+ D L NV+ID
Sbjct: 281 EMD------------------------------------------------ASLMNVLID 292
Query: 214 GFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYIT 273
+V+ G + A+ KLFN MP ++++SW ++SGY QN KEAM++F M + P+
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYA 352
Query: 274 LVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE 333
S+L + + L AL G VH Y K + D + +++IDMYAKC + A +VF+ I
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD-IF 411
Query: 334 NKKNAITWSAIIGG---LAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS 384
+ + ++A+I G L ++AL+ +R M+ + P+ + ++ LL A +
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 210/483 (43%), Gaps = 75/483 (15%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFL--SVSDRRDLKYARKFFTQMNNPNCFSWNTIIRA 90
KQIHAH ++ GL D A ++ L S + A K F M N N SW T++
Sbjct: 269 KQIHAHILRYGLEMD----ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324
Query: 91 FAETDDDDYKNPL--EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFV 148
+ + N L EA+ F M GL +P+ + S+L +CA + + G ++H +
Sbjct: 325 YKQ-------NALHKEAMELFTSMSKFGL-KPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 149 VKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLW 208
+K L ND +V
Sbjct: 377 IKANLGNDSYVT------------------------------------------------ 388
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF---FKEAMDVFHDMQMG 265
N +ID + + + +RK+F+ VV +N MI GY++ G EA+++F DM+
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR 448
Query: 266 DVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKA 325
+ P+ +T VS+L A + L +L L K +H K + +D GSA+ID+Y+ C ++ +
Sbjct: 449 LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS 508
Query: 326 IQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSH 385
VF++++ K+ + W+++ G +AL+ + ++Q + P + + +++A +
Sbjct: 509 RLVFDEMK-VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 386 AGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWK 445
++ G+ ++K G+E ++D + R D V W
Sbjct: 568 LASVQLGQEFHCQLLK-RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR-DVVCWN 625
Query: 446 ALLGACKMHGNVKMGERVARTLMKLFPHD-SGSYVALSNIFASRGNWVGVVEVRLKMKEM 504
+++ + HG G++ + L K+ +Y+ + ++ + G+VE LK E+
Sbjct: 626 SVISSYANHGE---GKKALQMLEKMMSEGIEPNYITFVGVLSACSH-AGLVEDGLKQFEL 681
Query: 505 DVR 507
+R
Sbjct: 682 MLR 684
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 166/372 (44%), Gaps = 64/372 (17%)
Query: 35 IHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAET 94
+H I GL D + ++ S + + YARK F +M N SW+T++ A
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAG--GMVYARKVFEKMPERNLVSWSTMVSAC--- 120
Query: 95 DDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKM-GRIQEGK----EIHGFVV 149
+ + E+L F + PN + S ++AC+ + GR G+ ++ F+V
Sbjct: 121 --NHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR---GRWMVFQLQSFLV 175
Query: 150 KLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWN 209
K G D D +V +
Sbjct: 176 KSGFDRDVYVGT------------------------------------------------ 187
Query: 210 VMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSP 269
++ID +++ G+I +R +F+ +P++S V+W MISG + G ++ +F+ + +V P
Sbjct: 188 LLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVP 247
Query: 270 NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF 329
+ L +VL A S L LE GK +H + + +E+D L + +ID Y KCG V A ++F
Sbjct: 248 DGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLI 389
+ N KN I+W+ ++ G + +A++ + M + G+ P +L++C+ +
Sbjct: 308 NGMPN-KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHAL 366
Query: 390 EEGRSLFNHMVK 401
G + + +K
Sbjct: 367 GFGTQVHAYTIK 378
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 19/279 (6%)
Query: 191 STKLVRNKRMQEGVVVLW---------NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNV 241
S L+ + + G +++W N++I+ + R G + +RK+F KMP+R++VSW+
Sbjct: 56 SDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWST 115
Query: 242 MISGYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGALELGKW----VHLY 296
M+S +G ++E++ VF + + SPN L S + A S L G+W + +
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSF 173
Query: 297 AEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAND 356
K+ + D +G+ +ID Y K G+++ A VF+ + +K+ +TW+ +I G GR+
Sbjct: 174 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMGRSYV 232
Query: 357 ALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
+L + ++ + V P + +LSACS +E G+ + H+++ G+E ++
Sbjct: 233 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLI 291
Query: 417 DXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHG 455
D MP + + W LL K +
Sbjct: 292 DSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSGYKQNA 329
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 271/529 (51%), Gaps = 54/529 (10%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGL----------------IGDPLAAAEILKFLSV 60
+++ A +++K KQIHA + G+ GD A+ +L+ +
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
Query: 61 SDRRDLK-----YA--------RKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALG 107
D L YA R F + +N WN++I + + +EAL
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN-----MKMEALV 305
Query: 108 FFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMY 167
F +M +E + T +V+ AC +G ++ GK++H K GL +D VAS L+ MY
Sbjct: 306 LFNEMRNE--TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
Query: 168 AMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKL 227
+ CG +A LFS V +D +L N MI + G I ++++
Sbjct: 364 SKCGSPMEACKLFSE-VESYD----------------TILLNSMIKVYFSCGRIDDAKRV 406
Query: 228 FNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGAL 287
F ++ +S++SWN M +G++QNG E ++ FH M D+ + ++L SV+ A + + +L
Sbjct: 407 FERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSL 466
Query: 288 ELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGG 347
ELG+ V A ++ D V+ S++ID+Y KCG VE +VF+ + K + + W+++I G
Sbjct: 467 ELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMV-KSDEVPWNSMISG 525
Query: 348 LAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEP 407
A +G+ +A+D ++KM AG+ PT + ++ +L+AC++ GL+EEGR LF M G P
Sbjct: 526 YATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVP 585
Query: 408 RVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTL 467
EH+ CMVD V MP D +W ++L C +G MG++ A +
Sbjct: 586 DKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKI 645
Query: 468 MKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIE 516
++L P +S +YV LS IFA+ G+W VR M+E +V K+PG SW +
Sbjct: 646 IELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 218/508 (42%), Gaps = 108/508 (21%)
Query: 33 KQIHAHFIKTGLIGD-PLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAF 91
+Q + +K G + + A +L+ S S + + AR F +M + N FSWNT+I +
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGK--MGIARNLFDEMPDRNYFSWNTMIEGY 103
Query: 92 AETDD--------------DDYKNPLEALGF------------FGQMCSEGLVEPNRF-- 123
+ + D Y + GF F M + +V N
Sbjct: 104 MNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLH 163
Query: 124 -------------------------TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEF 158
T +VLKACA++ ++ GK+IH ++ G++ D
Sbjct: 164 GYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSK 223
Query: 159 VASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRL 218
+ S+LV +YA CG + A + + D++S + +I G+
Sbjct: 224 MNSSLVNVYAKCGDLRMASYMLEQ-IREPDDHSL----------------SALISGYANC 266
Query: 219 GDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVL 278
G + SR LF++ R V+ WN MISGY N EA+ +F++M+ + + TL +V+
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVI 325
Query: 279 PAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS----------------- 321
A LG LE GK +H +A K + D V+ S ++DMY+KCGS
Sbjct: 326 NACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTI 385
Query: 322 --------------VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQA 367
++ A +VFE+IEN K+ I+W+++ G + +G + L+Y+ +M +
Sbjct: 386 LLNSMIKVYFSCGRIDDAKRVFERIEN-KSLISWNSMTNGFSQNGCTVETLEYFHQMHKL 444
Query: 368 GVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXX 427
+ +V ++SAC+ +E G +F +VG++ ++D
Sbjct: 445 DLPTDEVSLSSVISACASISSLELGEQVFAR-ATIVGLDSDQVVSSSLID-LYCKCGFVE 502
Query: 428 XXXXVLNMPIRPDDVIWKALLGACKMHG 455
V + ++ D+V W +++ +G
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNG 530
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 150/293 (51%), Gaps = 23/293 (7%)
Query: 122 RFTFPSVLKACAKMGRIQEGKEIHGFVVKLG-LDNDEFVASNLVRMYAMCGVMEDAYLLF 180
R + +L++C+ R ++ +G ++K G L + VA++L++MY+ G M A LF
Sbjct: 26 RRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLF 85
Query: 181 S-----NYVS---------HFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRK 226
NY S + T L M E WNV++ GF + G++ +R+
Sbjct: 86 DEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARR 145
Query: 227 LFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGA 286
LFN MP++ VV+ N ++ GY NG+ +EA+ +F ++ + S + ITL +VL A + L A
Sbjct: 146 LFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEA 202
Query: 287 LELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIG 346
L+ GK +H +E D + S+++++YAKCG + A + E+I + + SA+I
Sbjct: 203 LKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDH-SLSALIS 261
Query: 347 GLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
G A GR N++ + + V +++ ++S + E LFN M
Sbjct: 262 GYANCGRVNESRGLFDRKSNRCV----ILWNSMISGYIANNMKMEALVLFNEM 310
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 13 PTHPSSLFPQIARCKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYA 69
PT SL I+ C SI L +Q+ A GL D + ++ ++ +++
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGF--VEHG 504
Query: 70 RKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVL 129
R+ F M + WN++I +A EA+ F +M G + P + TF VL
Sbjct: 505 RRVFDTMVKSDEVPWNSMISGYATNG-----QGFEAIDLFKKMSVAG-IRPTQITFMVVL 558
Query: 130 KACAKMGRIQEGKEI-------HGFVVKLGLDNDEFVASNLVRMYAMCGVMEDA 176
AC G ++EG+++ HGFV D + F S +V + A G +E+A
Sbjct: 559 TACNYCGLVEEGRKLFESMKVDHGFVP----DKEHF--SCMVDLLARAGYVEEA 606
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 158/542 (29%), Positives = 273/542 (50%), Gaps = 60/542 (11%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDP-LAAAEILKFLSVSDRRDLKYARKFFTQ 75
SSL P +++ ++++ KQIH + ++ + D L +A I + R + A+ F+Q
Sbjct: 344 SSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC---RGVSMAQNIFSQ 400
Query: 76 MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKM 135
N+ + + +I + + Y + LE + ++ + PN T S+L +
Sbjct: 401 CNSVDVVVFTAMISGYLH--NGLYIDSLEMFRWLVKV----KISPNEITLVSILPVIGIL 454
Query: 136 GRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLV 195
++ G+E+HGF++K G DN
Sbjct: 455 LALKLGRELHGFIIKKGFDN---------------------------------------- 474
Query: 196 RNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEA 255
R G V ID + + G + + ++F ++ +R +VSWN MI+ AQ+ A
Sbjct: 475 ---RCNIGCAV-----IDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 256 MDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDM 315
+D+F M + + + +++ + L A + L + GK +H + K+ + D S +IDM
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 316 YAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM-QQAGVTPTDV 374
YAKCG+++ A+ VF+ ++ +KN ++W++II HG+ D+L + +M +++G+ P +
Sbjct: 587 YAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 645
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLN 434
++ ++S+C H G ++EG F M + GI+P+ EHY C+VD V +
Sbjct: 646 TFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 705
Query: 435 MPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGV 494
MP PD +W LLGAC++H NV++ E + LM L P +SG YV +SN A+ W V
Sbjct: 706 MPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESV 765
Query: 495 VEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYR 554
+VR MKE +V+K PG SWIEI+ H F+ D +HP + I S+L + +R GY
Sbjct: 766 TKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYI 825
Query: 555 PN 556
P
Sbjct: 826 PQ 827
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 220/506 (43%), Gaps = 76/506 (15%)
Query: 11 TRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFL----SVSDRRDL 66
T P S L + ++Q KQ+HA I + GD IL S SD +
Sbjct: 33 TIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 67 KYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPL--EALGFFGQMCSEGLVEPNRFT 124
Y P WN+II +F +N L +AL F+ +M G V P+ T
Sbjct: 93 FYRLDLRRSSIRP----WNSIISSFV-------RNGLLNQALAFYFKMLCFG-VSPDVST 140
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMY----------------- 167
FP ++KAC + + + V LG+D +EFVAS+L++ Y
Sbjct: 141 FPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVL 200
Query: 168 --------------AMCGVMEDAYLLFS---------NYVSHFDN----NSTKLVRNKRM 200
A CG ++ FS N V+ FD ++KL+ + +
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVT-FDCVLSVCASKLLIDLGV 259
Query: 201 Q-EGVVVLWNVMIDG---------FVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNG 250
Q G+VV+ V +G + + G + KLF M + V+WN MISGY Q+G
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 251 FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGS 310
+E++ F++M V P+ IT S+LP++S+ LE K +H Y ++ I +D L S
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 311 AVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
A+ID Y KC V A +F + N + + ++A+I G +G D+L+ +R + + ++
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQC-NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXX 430
P ++ + +L ++ GR L ++K G + R + GC V
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIK-KGFDNRC-NIGCAVIDMYAKCGRMNLAY 496
Query: 431 XVLNMPIRPDDVIWKALLGACKMHGN 456
+ + D V W +++ C N
Sbjct: 497 EIFERLSKRDIVSWNSMITRCAQSDN 522
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 221/498 (44%), Gaps = 68/498 (13%)
Query: 18 SLFPQIAR-CKSIKQLKQI---HAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFF 73
S FP + + C ++K K I G+ + A+ ++K + D+ K F
Sbjct: 139 STFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDV--PSKLF 196
Query: 74 TQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACA 133
++ +C WN ++ +A+ D + F M + + PN TF VL CA
Sbjct: 197 DRVLQKDCVIWNVMLNGYAKCGALD-----SVIKGFSVMRMDQ-ISPNAVTFDCVLSVCA 250
Query: 134 KMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF------------- 180
I G ++HG VV G+D + + ++L+ MY+ CG +DA LF
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 181 --SNYV----------------------------------SHFDN-NSTKLVRNKRMQEG 203
S YV S F+N K + M+
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 204 V---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFH 260
+ + L + +ID + + + ++ +F++ VV + MISGY NG + +++++F
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 261 DMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCG 320
+ +SPN ITLVS+LP I L AL+LG+ +H + K + +G AVIDMYAKCG
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG 490
Query: 321 SVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLL 380
+ A ++FE++ +K++ ++W+++I A + A+D +R+M +G+ V L
Sbjct: 491 RMNLAYEIFERL-SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 381 SACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPD 440
SAC++ G+++ M+K + V ++D M +
Sbjct: 550 SACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKN 607
Query: 441 DVIWKALLGACKMHGNVK 458
V W +++ AC HG +K
Sbjct: 608 IVSWNSIIAACGNHGKLK 625
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/630 (29%), Positives = 311/630 (49%), Gaps = 79/630 (12%)
Query: 33 KQIHAHFIKTGL-IGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAF 91
KQ+H +K GL +A A I + D A F + N +WN++I AF
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 92 AETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK------EIH 145
+ +A+G F +M S+G V +R T ++ + K + + ++H
Sbjct: 237 QCCNLGK-----KAIGVFMRMHSDG-VGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLH 290
Query: 146 GFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVV 205
VK GL VA+ L+++Y+
Sbjct: 291 SLTVKSGLVTQTEVATALIKVYSE------------------------------------ 314
Query: 206 VLWNVMIDGFVRLGDIGASRKLFNKMPQ-RSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
L D KLF +M R +V+WN +I+ +A + A+ +F ++
Sbjct: 315 -----------MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQ 362
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEK 324
+SP++ T SVL A + L +H K D VL +++I YAKCGS++
Sbjct: 363 EKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDL 422
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS 384
++VF+ ++++ + ++W++++ ++HG+ + L ++KM + P +I LLSACS
Sbjct: 423 CMRVFDDMDSR-DVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACS 478
Query: 385 HAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIW 444
HAG +EEG +F M + P++ HY C++D + MP+ PD V+W
Sbjct: 479 HAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVW 538
Query: 445 KALLGACKMHGNVKMGERVARTLMKLF-PHDSGSYVALSNIFASRGNWVGVVEVRLKMKE 503
ALLG+C+ HGN ++G+ A L +L P +S SY+ +SNI+ + G++ E L +KE
Sbjct: 539 IALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSF---NEANLSIKE 595
Query: 504 MD---VRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNI-TQ 559
M+ VRK+P SW EI +HEF P + + L+ + + ++ GY P + +
Sbjct: 596 METWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSA 655
Query: 560 VLLNMDEEKKESALHYHSERIAIAFGLISTRPQTP-----LRIVKNLRVCEDCHSSIKLI 614
DEE++E L +HSE++A+AF ++ R + ++I+KN R+C DCH+ +KL
Sbjct: 656 SQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLA 715
Query: 615 SEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
S++ ++I++RD RFHHF+ CSC DYW
Sbjct: 716 SKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 172/442 (38%), Gaps = 94/442 (21%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
++ YAR+ F M N SW +I + + ++ E F M S PN FT
Sbjct: 111 NILYARQVFDTMPERNVVSWTALITGYVQAGNEQ-----EGFCLFSSMLSHCF--PNEFT 163
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
SVL +C R + GK++HG +KLGL +VA+ ++ MY C AY
Sbjct: 164 LSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAY------- 212
Query: 185 SHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMIS 244
W V F + +++V+WN MI+
Sbjct: 213 ---------------------EAWTV-----------------FEAIKFKNLVTWNSMIA 234
Query: 245 GYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGAL---ELGKW---VHLYAE 298
+ K+A+ VF M V + TL+++ ++ + L E+ K +H
Sbjct: 235 AFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTV 294
Query: 299 KNEIEIDDVLGSAVIDMYAK-CGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDA 357
K+ + + +A+I +Y++ ++F ++ + ++ + W+ II A++ A
Sbjct: 295 KSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERA 353
Query: 358 LDYYRKMQQAGVTPTDVVYIGLLSACS-----------HAGLIEEG--------RSLFNH 398
+ + +++Q ++P + +L AC+ HA +I+ G SL +
Sbjct: 354 IHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHA 413
Query: 399 MVKVVGIE-----------PRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKAL 447
K ++ V + M+ M I PD + AL
Sbjct: 414 YAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIAL 473
Query: 448 LGACKMHGNVKMGERVARTLMK 469
L AC G V+ G R+ R++ +
Sbjct: 474 LSACSHAGRVEEGLRIFRSMFE 495
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
V+L N +I+ + + G+I +R++F+ MP+R+VVSW +I+GY Q G +E +F M +
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-L 154
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC---GS 321
PN TL SVL + E GK VH A K + + +AVI MY +C +
Sbjct: 155 SHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAA 210
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV 369
+A VFE I+ KN +TW+++I A+ + +M GV
Sbjct: 211 AYEAWTVFEAIK-FKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV 257
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 281/553 (50%), Gaps = 66/553 (11%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
+S+ R + + Q+HA K+G D AA ++ S S DL + + F +
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDL--SEQVFEDL 412
Query: 77 NNPNCFSW-NTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKM 135
++ + N +I +F+++ K P +A+ F +M EGL + F+ S+L +
Sbjct: 413 DDIQRQNIVNVMITSFSQS-----KKPGKAIRLFTRMLQEGL-RTDEFSVCSLLSV---L 463
Query: 136 GRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF-----------SNYV 184
+ GK++HG+ +K GL D V S+L +Y+ CG +E++Y LF ++ +
Sbjct: 464 DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMI 523
Query: 185 SHFD----------------------NNST-----------------KLVRNKRMQEGV- 204
S F+ + ST K + ++ G+
Sbjct: 524 SGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGID 583
Query: 205 --VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM 262
+ L + +++ + + G + +R++++++P+ VS + +ISGY+Q+G ++ +F DM
Sbjct: 584 KGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDM 643
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
M + + + S+L A + LG VH Y K + + +GS+++ MY+K GS+
Sbjct: 644 VMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSI 703
Query: 323 EKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
+ + F +I N + I W+A+I A HG+AN+AL Y M++ G P V ++G+LSA
Sbjct: 704 DDCCKAFSQI-NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSA 762
Query: 383 CSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV 442
CSH GL+EE N MVK GIEP HY CMVD + NM I+PD +
Sbjct: 763 CSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDAL 822
Query: 443 IWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMK 502
+W LL ACK+HG V++G+ A+ ++L P D+G+Y++LSNI A G W V E R MK
Sbjct: 823 VWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMK 882
Query: 503 EMDVRKDPGCSWI 515
V+K+PG S +
Sbjct: 883 GTGVQKEPGWSSV 895
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 216/502 (43%), Gaps = 69/502 (13%)
Query: 23 IARCKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNP 79
+A C S+++L K + A IK G D I+ + + A + F+++ NP
Sbjct: 258 LAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGH--MAEAMEVFSRIPNP 314
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
+ SW ++ + +++D AL F +M G VE N T SV+ AC + +
Sbjct: 315 SVVSWTVMLSGYTKSND-----AFSALEIFKEMRHSG-VEINNCTVTSVISACGRPSMVC 368
Query: 140 EGKEIHGFVVKLGLDNDEFVASNLVRMYAMCG-------VMED----------------- 175
E ++H +V K G D VA+ L+ MY+ G V ED
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSF 428
Query: 176 --------AYLLFS---------------NYVSHFDN-NSTKLVRNKRMQEGVVVLWNV- 210
A LF+ + +S D N K V ++ G+V+ V
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVG 488
Query: 211 --MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
+ + + G + S KLF +P + W MISG+ + G+ +EA+ +F +M S
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTS 548
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQV 328
P+ TL +VL S +L GK +H Y + I+ LGSA+++MY+KCGS++ A QV
Sbjct: 549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQV 608
Query: 329 FEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGL 388
++++ + + ++ S++I G + HG D +R M +G T +L A + +
Sbjct: 609 YDRLP-ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDE 667
Query: 389 IEEGRSLFNHMVKV-VGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKAL 447
G + ++ K+ + EP V G + + PD + W AL
Sbjct: 668 SSLGAQVHAYITKIGLCTEPSV---GSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTAL 724
Query: 448 LGACKMHGNVKMGERVARTLMK 469
+ + HG +V LMK
Sbjct: 725 IASYAQHGKANEALQV-YNLMK 745
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 125/520 (24%), Positives = 217/520 (41%), Gaps = 101/520 (19%)
Query: 35 IHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAET 94
+ H IK G + + ++ S + R + Y K F + N + WNTII
Sbjct: 172 VCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAY--KVFRDSLSANVYCWNTIIAGALRN 229
Query: 95 DDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLD 154
+N F +MC G +P+ +T+ SVL ACA + +++ GK + V+K G +
Sbjct: 230 -----QNYGAVFDLFHEMCV-GFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE 283
Query: 155 NDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDG 214
D FV + +V +YA CG M +A +FS R+ VV W VM+ G
Sbjct: 284 -DVFVCTAIVDLYAKCGHMAEAMEVFS-----------------RIPNPSVVSWTVMLSG 325
Query: 215 FVRLGDIGASRKLFNKMPQR----------SVVS----------------W--------- 239
+ + D ++ ++F +M SV+S W
Sbjct: 326 YTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLD 385
Query: 240 ----NVMISGYAQNGFFKEAMDVFHDM---QMGDVSPNYITLVS---------------- 276
+IS Y+++G + VF D+ Q ++ IT S
Sbjct: 386 SSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRML 445
Query: 277 ----------VLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAI 326
V +S L L LGK VH Y K+ + +D +GS++ +Y+KCGS+E++
Sbjct: 446 QEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESY 505
Query: 327 QVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
++F+ I K NA W+++I G +G +A+ + +M G +P + +L+ CS
Sbjct: 506 KLFQGIPFKDNA-CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSH 564
Query: 387 GLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKA 446
+ G+ + + ++ GI+ ++ +V+ +P D V +
Sbjct: 565 PSLPRGKEIHGYTLR-AGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSS 622
Query: 447 LLGACKMHGNVKMGERVARTL-MKLFPHDSGSYVALSNIF 485
L+ HG ++ G + R + M F DS A+S+I
Sbjct: 623 LISGYSQHGLIQDGFLLFRDMVMSGFTMDS---FAISSIL 659
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 1/197 (0%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
V L ++ + G + + KLF+ +PQ VVS N+MISGY Q+ F+E++ F M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEK 324
N I+ SV+ A S L A + V + K +V+ SA+ID+++K E
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS 384
A +VF N W+ II G + D + +M P Y +L+AC+
Sbjct: 204 AYKVFRD-SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 385 HAGLIEEGRSLFNHMVK 401
+ G+ + ++K
Sbjct: 263 SLEKLRFGKVVQARVIK 279
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 155/444 (34%), Positives = 237/444 (53%), Gaps = 26/444 (5%)
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
++ A + F Q+ + SW T+I + D EAL ++ +M G+ +P+
Sbjct: 509 IEQAEELFDQITEKDIVSWGTMIDGCLRKNQLD-----EALVYYTEMLRCGM-KPSEVMM 562
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVS 185
+L A A+ +G ++HG +VK G D +F+ + ++ YA V D L + +
Sbjct: 563 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYA---VSNDIKLALQQFEA 619
Query: 186 HFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISG 245
++ + N +I GFV+ G + +R++F++ + + SWN MISG
Sbjct: 620 SVKDH--------------IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISG 665
Query: 246 YAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI 304
YAQ+ + A+ +F +M V P+ IT+VSV AIS LG+LE GK H Y + I
Sbjct: 666 YAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPP 725
Query: 305 DDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAIT--WSAIIGGLAMHGRANDALDYYR 362
+D L +A+IDMYAKCGS+E A+ +F + +N ++ W+AII G A HG A ALD Y
Sbjct: 726 NDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYS 785
Query: 363 KMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXX 422
+Q + P + ++G+LSAC HAGL+E G++ F M GIEP ++HYGCMVD
Sbjct: 786 DLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKA 845
Query: 423 XXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALS 482
+ MP++ D +IW LL A + HGNV++ E A L + P G V LS
Sbjct: 846 GRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLS 905
Query: 483 NIFASRGNWVGVVEVRLKMKEMDV 506
N++A G W V VR +M+ DV
Sbjct: 906 NVYADAGRWEDVALVREEMRTRDV 929
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 181/368 (49%), Gaps = 56/368 (15%)
Query: 64 RDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRF 123
R L A K F M +C S+ T+I+ +A+ + EA+ F +M + G++ N
Sbjct: 375 RRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWS-----EAMELFREMRNLGIML-NEV 428
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
T +V+ AC+ +G I + + + +KL L+ FV++NL+ MY +C ++DA LF
Sbjct: 429 TLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLF--- 485
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMI 243
M E +V WNVM++G+ + G I + +LF+++ ++ +VSW MI
Sbjct: 486 --------------DEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI 531
Query: 244 SGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISR-LGA---LEL---------- 289
G + EA+ + +M + P+ + +V +L A +R +G+ L+L
Sbjct: 532 DGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 591
Query: 290 ------GKWVHLYAEKNEIE---------IDDVLGS--AVIDMYAKCGSVEKAIQVFEKI 332
+H YA N+I+ + D + S A+I + K G VE+A +VF++
Sbjct: 592 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 651
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALDYYRKM-QQAGVTPTDVVYIGLLSACSHAGLIEE 391
+ K+ +W+A+I G A AL +R+M + V P + + + SA S G +EE
Sbjct: 652 HD-KDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEE 710
Query: 392 GRSLFNHM 399
G+ +++
Sbjct: 711 GKRAHDYL 718
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 159/306 (51%), Gaps = 49/306 (16%)
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
S L +CA + G++IH V+K GLD++ ++ ++++ MYA C ++ DA +F ++ +
Sbjct: 300 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH-AK 358
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGY 246
D+ S +N+M+DG+VR + + KLF+ MP+RS VS+ +I GY
Sbjct: 359 LDSAS----------------FNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGY 402
Query: 247 AQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD 306
AQN + EAM++F +M+ + N +TL +V+ A S LG + + + A K ++E
Sbjct: 403 AQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRV 462
Query: 307 VLGSAVIDMYAKC-------------------------------GSVEKAIQVFEKIENK 335
+ + ++ MY C G +E+A ++F++I +
Sbjct: 463 FVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI-TE 521
Query: 336 KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSL 395
K+ ++W +I G + ++AL YY +M + G+ P++V+ + LLSA + + +G L
Sbjct: 522 KDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQL 581
Query: 396 FNHMVK 401
+VK
Sbjct: 582 HGTIVK 587
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/570 (30%), Positives = 269/570 (47%), Gaps = 94/570 (16%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
S L I+RC S++ KQI I L+ D L +++ FL S + +
Sbjct: 7 SVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIR 66
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
+ + FS+NT++ ++A D P + + S G P+ FTFP V KAC K
Sbjct: 67 SVLSSFSYNTLLSSYAVCD-----KPRVTIFAYKTFVSNGF-SPDMFTFPPVFKACGKFS 120
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVR 196
I+EGK+IHG V K+G +D +V ++LV Y +CG +A +F VR
Sbjct: 121 GIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMP----------VR 170
Query: 197 NKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKM------------------------- 231
+ VV W +I GF R G + F+KM
Sbjct: 171 D-------VVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLG 223
Query: 232 --------PQRSVVSW---NVMISGYAQNGFFKEAMDVFHDMQMGD-------------- 266
+ S++S N +I Y + +AM VF +++ D
Sbjct: 224 KGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHC 283
Query: 267 ------------------VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVL 308
+ P+ L SVL A + LGA++ G+WVH Y I+ D +
Sbjct: 284 ERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHI 343
Query: 309 GSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
G+A++DMYAKCG +E A+++F I + KN TW+A++GGLA+HG ++L Y+ +M + G
Sbjct: 344 GTAIVDMYAKCGYIETALEIFNGIRS-KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG 402
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHM-VKVVGIEPRVEHYGCMVDXXXXXXXXXX 427
P V ++ L+AC H GL++EGR F+ M + + P++EHYGCM+D
Sbjct: 403 FKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDE 462
Query: 428 XXXXVLNMPIRPDDVIWKALLGACKMHGNV-KMGERVARTLMKLFPHDSGSYVALSNIFA 486
V MP++PD I A+L ACK G + ++ + + + + + DSG YV LSNIFA
Sbjct: 463 ALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFA 522
Query: 487 SRGNWVGVVEVRLKMKEMDVRKDPGCSWIE 516
+ W V +R MK + K PG S+IE
Sbjct: 523 ANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 256/501 (51%), Gaps = 69/501 (13%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIGD--PLAAAEILKFLSVSDRRDLKYARKFFTQMNNPN 80
I++CKS++ LKQIHA I GL PL+ K L +S L YA Q+ NP+
Sbjct: 16 ISKCKSLQNLKQIHAQIITIGLSHHTYPLS-----KLLHLSSTVCLSYALSILRQIPNPS 70
Query: 81 CFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSE--GLVEPNRFTFPSVLKACAKMGRI 138
F +NT+I + + + A + Q+ S V PN FT+PS+ KA +
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHL--AFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQW 128
Query: 139 -QEGKEIHGFVVKL--GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLV 195
+ G+ +H V+K +++D FV + LV YA C
Sbjct: 129 HRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANC------------------------- 163
Query: 196 RNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFF--- 252
G + +R LF ++ + + +WN +++ YA +
Sbjct: 164 -----------------------GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSD 200
Query: 253 KEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAV 312
+E + +F MQ V PN ++LV+++ + + LG G W H+Y KN + ++ +G+++
Sbjct: 201 EEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSL 257
Query: 313 IDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPT 372
ID+Y+KCG + A +VF+++ ++++ ++A+I GLA+HG + ++ Y+ + G+ P
Sbjct: 258 IDLYSKCGCLSFARKVFDEM-SQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPD 316
Query: 373 DVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXV 432
++ +SACSH+GL++EG +FN M V GIEP+VEHYGC+VD +
Sbjct: 317 SATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECI 376
Query: 433 LNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWV 492
MP++P+ +W++ LG+ + HG+ + GE + L+ L +SG+YV LSNI+A W
Sbjct: 377 KKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWT 436
Query: 493 GVVEVRLKMKEMDVRKDPGCS 513
V + R MK+ V K PG S
Sbjct: 437 DVEKTRELMKDHRVNKSPGIS 457
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/556 (30%), Positives = 272/556 (48%), Gaps = 63/556 (11%)
Query: 12 RPTHPS--SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYA 69
R +HPS SL CKS L QIHA I+ GL D I S S L Y+
Sbjct: 4 RLSHPSLLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQ-NLISIFISSSSSSSSSLSYS 62
Query: 70 RKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPL---EALGFFGQMCSEGLVEPNRFTFP 126
F ++ +P + WN +I+ Y N E + +M GL P+ +TFP
Sbjct: 63 SSVFERVPSPGTYLWNHLIKG--------YSNKFLFFETVSILMRMMRTGLARPDEYTFP 114
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
V+K C+ G+++ G +HG V+++G D D V ++ V Y C + A +F
Sbjct: 115 LVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER 174
Query: 187 FDNNSTKLV----RNKRMQEGVVVL----------WNVMIDGFVRLGDIGASRKLFNKMP 232
+ T LV ++ ++E + WN ++DG V+ GD+ ++KLF++MP
Sbjct: 175 NAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMP 234
Query: 233 QRSVVS-------------------------------WNVMISGYAQNGFFKEAMDVFHD 261
+R ++S W+ +I GYAQNG EA VF +
Sbjct: 235 KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 294
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWV--HLYAEKNEIEIDDVLGSAVIDMYAKC 319
M +V P+ +V ++ A S++G EL + V +L+ N+ V+ A+IDM AKC
Sbjct: 295 MCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-PALIDMNAKC 353
Query: 320 GSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGL 379
G +++A ++FE++ +++ +++ +++ G+A+HG ++A+ + KM G+ P +V + +
Sbjct: 354 GHMDRAAKLFEEMP-QRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVI 412
Query: 380 LSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRP 439
L C + L+EEG F M K I +HY C+V+ + +MP
Sbjct: 413 LKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 472
Query: 440 DDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRL 499
W +LLG C +HGN ++ E VAR L +L P +GSYV LSNI+A+ W V +R
Sbjct: 473 HASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRD 532
Query: 500 KMKEMDVRKDPGCSWI 515
KM E + K G SWI
Sbjct: 533 KMNENGITKICGRSWI 548
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 167/596 (28%), Positives = 279/596 (46%), Gaps = 69/596 (11%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRD 65
EP T P + AR + + +HAH IK+ D + + D
Sbjct: 49 EPNNFTFPF----VAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVD 104
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
YA K F +M + +WN ++ F ++ D +A F +M + P+ T
Sbjct: 105 --YAAKVFERMPERDATTWNAMLSGFCQSGHTD-----KAFSLFREM-RLNEITPDSVTV 156
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL------ 179
+++++ + ++ + +H ++LG+D VA+ + Y CG ++ A L+
Sbjct: 157 MTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDR 216
Query: 180 --------------FSNYVSHFD---------------------------NNSTKLVRNK 198
+S + FD N L + +
Sbjct: 217 GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
Query: 199 RMQEGVVVLW--------NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNG 250
+ + L N I + + D ++R LF+ M R+ VSW VMISGYA+ G
Sbjct: 277 LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKG 336
Query: 251 FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVL-G 309
EA+ +FH M P+ +TL+S++ + G+LE GKW+ A+ + D+V+
Sbjct: 337 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 396
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV 369
+A+IDMY+KCGS+ +A +F+ +K +TW+ +I G A++G +AL + KM
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDY 455
Query: 370 TPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXX 429
P + ++ +L AC+H+G +E+G F+ M +V I P ++HY CMVD
Sbjct: 456 KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEAL 515
Query: 430 XXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRG 489
+ NM +PD IW ALL ACK+H NVK+ E+ A +L L P + YV ++NI+A+ G
Sbjct: 516 ELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAG 575
Query: 490 NWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEIS 545
W G +R MK+ +++K PG S I+++G H F V + H + I L +S
Sbjct: 576 MWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLS 631
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Query: 225 RKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRL 284
R+L+ SV +WN+ I E++ +F +M+ G PN T V A +RL
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 285 GALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAI 344
+ + VH + K+ D +G+A +DM+ KC SV+ A +VFE++ +++A TW+A+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP-ERDATTWNAM 124
Query: 345 IGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS 384
+ G G + A +R+M+ +TP V + L+ + S
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/582 (28%), Positives = 276/582 (47%), Gaps = 61/582 (10%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
A + F + N ++N ++ F + L+AL F M G VE F+ S
Sbjct: 370 AVEIFANVTEKNTITYNALMAGFCRNG-----HGLKALKLFTDMLQRG-VELTDFSLTSA 423
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD 188
+ AC + + ++IHGF +K G + + + L+ M C
Sbjct: 424 VDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRC------------------ 465
Query: 189 NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR--SVVSWNVMISGY 246
+RM + + ++F++ P S + +I GY
Sbjct: 466 ---------ERMAD---------------------AEEMFDQWPSNLDSSKATTSIIGGY 495
Query: 247 AQNGFFKEAMDVFH-DMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEID 305
A+NG +A+ +FH + + + ++L +L LG E+G +H YA K D
Sbjct: 496 ARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSD 555
Query: 306 DVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQ 365
LG+++I MYAKC + AI++F + + + I+W+++I + ++AL + +M
Sbjct: 556 ISLGNSLISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLISCYILQRNGDEALALWSRMN 614
Query: 366 QAGVTPTDVVYIGLLSAC--SHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXX 423
+ + P + ++SA + + + R LF M + IEP EHY V
Sbjct: 615 EKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWG 674
Query: 424 XXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSN 483
+ +MP++P+ + +ALL +C++H N + +RVA+ ++ P Y+ SN
Sbjct: 675 LLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSN 734
Query: 484 IFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEE 543
I+++ G W +R +M+E RK P SWI + IH F D SHP+ K+I LE
Sbjct: 735 IYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEI 794
Query: 544 ISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQ-TPLRIVKNLR 602
+ GY PN VL +DE K+S L +HS ++A+ +G++S+ + P+R++KN+
Sbjct: 795 LIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVM 854
Query: 603 VCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+C DCH K IS + KR+I++RD FHHF G CSC D W
Sbjct: 855 LCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 173/402 (43%), Gaps = 90/402 (22%)
Query: 24 ARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFS 83
A+ ++ K +HA F+K L A I +L + R+ A F +++P S
Sbjct: 91 AQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPRE---AILVFVSLSSPTVVS 147
Query: 84 WNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKE 143
+ +I F+ + + +EAL F +M GLV+PN +TF ++L AC ++ R G +
Sbjct: 148 YTALISGFSRLNLE-----IEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ 202
Query: 144 IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEG 203
IHG +VK G N FV+++L+ +Y D+ S+
Sbjct: 203 IHGLIVKSGFLNSVFVSNSLMSLYDK------------------DSGSS----------- 233
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM- 262
D ++ LF+++PQR V SWN ++S + G +A D+F++M
Sbjct: 234 --------CDDVLK---------LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMN 276
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEK----NEIEI-------------- 304
++ + TL ++L + + L G+ +H A + E+ +
Sbjct: 277 RVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDM 336
Query: 305 -------------DDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMH 351
D V + +I Y G V+ A+++F + +KN IT++A++ G +
Sbjct: 337 KKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV-TEKNTITYNALMAGFCRN 395
Query: 352 GRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGR 393
G AL + M Q GV TD + AC GL+ E +
Sbjct: 396 GHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSEKK 434
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 163/370 (44%), Gaps = 24/370 (6%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
QIH +K+G + + ++ K F ++ + SWNT++ + +
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 94 TDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGL 153
+A F +M + FT ++L +C + G+E+HG +++GL
Sbjct: 262 EGKSH-----KAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGL 316
Query: 154 DNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMID 213
+ V + L+ Y+ M+ L+ + M V + MI
Sbjct: 317 MQELSVNNALIGFYSKFWDMKKVESLY-----------------EMMMAQDAVTFTEMIT 359
Query: 214 GFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYIT 273
++ G + ++ ++F + +++ +++N +++G+ +NG +A+ +F DM V +
Sbjct: 360 AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS 419
Query: 274 LVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK-I 332
L S + A + ++ + +H + K + + +A++DM +C + A ++F++
Sbjct: 420 LTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Query: 333 ENKKNAITWSAIIGGLAMHGRANDALD-YYRKMQQAGVTPTDVVYIGLLSACSHAGLIEE 391
N ++ ++IIGG A +G + A+ ++R + + + +V +L+ C G E
Sbjct: 480 SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREM 539
Query: 392 GRSLFNHMVK 401
G + + +K
Sbjct: 540 GYQIHCYALK 549
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 116/238 (48%), Gaps = 7/238 (2%)
Query: 171 GVMEDAYLLFSNYVSHFDNNSTKLVRNK--RMQEGVVVLWNVMIDGFVRLGDIGASRKLF 228
V++ + L + D TK V +++E L N +I +++LG + +F
Sbjct: 78 SVIDGFFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVF 137
Query: 229 NKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGAL 287
+ +VVS+ +ISG+++ EA+ VF M + G V PN T V++L A R+
Sbjct: 138 VSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRF 197
Query: 288 ELGKWVHLYAEKNEIEIDDVLGSAVIDMYAK--CGSVEKAIQVFEKIENKKNAITWSAII 345
LG +H K+ + ++++ +Y K S + +++F++I +++ +W+ ++
Sbjct: 198 SLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIP-QRDVASWNTVV 256
Query: 346 GGLAMHGRANDALDYYRKMQQA-GVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV 402
L G+++ A D + +M + G LLS+C+ + ++ GR L +++
Sbjct: 257 SSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRI 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 39/276 (14%)
Query: 18 SLFPQIARCKSIKQLK---QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFT 74
SL + C + + K QIH IK G +P +L + +R + A + F
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCER--MADAEEMFD 476
Query: 75 Q--MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
Q N + + +II +A D +A+ F + E + + + +L C
Sbjct: 477 QWPSNLDSSKATTSIIGGYARNGLPD-----KAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNST 192
+G + G +IH + +K G +D + ++L+ MYA C +DA +F+
Sbjct: 532 GTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNT---------- 581
Query: 193 KLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS----VVSWNVMISG--Y 246
M+E V+ WN +I ++ + + L+++M ++ +++ ++IS Y
Sbjct: 582 -------MREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRY 634
Query: 247 AQNGFFKEAMDVFHDMQ-MGDVSP---NYITLVSVL 278
++ D+F M+ + D+ P +Y V VL
Sbjct: 635 TESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVL 670
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 158/503 (31%), Positives = 271/503 (53%), Gaps = 32/503 (6%)
Query: 64 RDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRF 123
+ L A F +M N SWNT+I +A++ D +AL F +M +V N
Sbjct: 123 KQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRID-----KALELFDEMPERNIVSWN-- 175
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS-- 181
S++KA + GRI E + + + D + +V A G +++A LF
Sbjct: 176 ---SMVKALVQRGRIDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 182 ---NYVSHFDNNSTKLVRNKRMQEGVVVL----------WNVMIDGFVRLGDIGASRKLF 228
N +S ++ T +N R+ E + WN MI GF+R ++ + LF
Sbjct: 229 PERNIIS-WNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLF 287
Query: 229 NKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGAL 287
++MP+++V+SW MI+GY +N +EA++VF M + G V PN T VS+L A S L L
Sbjct: 288 DRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 288 ELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK-IENKKNAITWSAIIG 346
G+ +H K+ + ++++ SA+++MY+K G + A ++F+ + +++ I+W+++I
Sbjct: 348 VEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIA 407
Query: 347 GLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIE 406
A HG +A++ Y +M++ G P+ V Y+ LL ACSHAGL+E+G F +V+ +
Sbjct: 408 VYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP 467
Query: 407 PRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVART 466
R EHY C+VD + R + A+L AC +H V + + V +
Sbjct: 468 LREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKK 527
Query: 467 LMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLV 526
+++ D+G+YV +SNI+A+ G E+R+KMKE ++K PGCSW+++ H F+V
Sbjct: 528 VLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVV 587
Query: 527 EDESHPRAKEIRSMLEEISNRIR 549
D+SHP+ + + S+L ++ N++R
Sbjct: 588 GDKSHPQFEALDSILSDLRNKMR 610
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 144/305 (47%), Gaps = 54/305 (17%)
Query: 115 EGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVME 174
+GL E + T+ V+ K+G ++E +E+ ++ + + +V Y +
Sbjct: 70 DGLPERDVVTWTHVITGYIKLGDMREARELFD---RVDSRKNVVTWTAMVSGYLRSKQLS 126
Query: 175 DAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR 234
A +LF + M E VV WN MIDG+ + G I + +LF++MP+R
Sbjct: 127 IAEMLF-----------------QEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 235 SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGK--- 291
++VSWN M+ Q G EAM++F M DV ++ +++ +++ G ++ +
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLF 225
Query: 292 ----------W---VHLYAEKNEIEIDDVL-----------GSAVIDMYAKCGSVEKAIQ 327
W + YA+ N I+ D L + +I + + + KA
Sbjct: 226 DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACG 285
Query: 328 VFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG-VTPTDVVYIGLLSACSH- 385
+F+++ +KN I+W+ +I G + +AL+ + KM + G V P Y+ +LSACS
Sbjct: 286 LFDRMP-EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDL 344
Query: 386 AGLIE 390
AGL+E
Sbjct: 345 AGLVE 349
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 107/189 (56%), Gaps = 12/189 (6%)
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPN 270
+I ++G I +RKLF+ +P+R VV+W +I+GY + G +EA ++F + D N
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKN 108
Query: 271 YITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFE 330
+T +++ R L + + L+ E E + V + +ID YA+ G ++KA+++F+
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAE--MLFQEMPERNV--VSWNTMIDGYAQSGRIDKALELFD 164
Query: 331 KIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIE 390
++ ++N ++W++++ L GR ++A++ + +M + V V + ++ + G ++
Sbjct: 165 EMP-ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVD 219
Query: 391 EGRSLFNHM 399
E R LF+ M
Sbjct: 220 EARRLFDCM 228
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 127/248 (51%), Gaps = 31/248 (12%)
Query: 134 KMGRIQEGKEIHGFVVKLGL-DNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNST 192
K+G+I E +++ GL + D ++++ Y G M +A LF S +
Sbjct: 58 KVGKIAEARKLFD-----GLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKN---- 108
Query: 193 KLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFF 252
VV W M+ G++R + + LF +MP+R+VVSWN MI GYAQ+G
Sbjct: 109 ------------VVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRI 156
Query: 253 KEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAV 312
+A+++F +M N ++ S++ A+ + G ++ ++L+ ++ V +A+
Sbjct: 157 DKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEA--MNLFERMPRRDV--VSWTAM 208
Query: 313 IDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPT 372
+D AK G V++A ++F+ + ++N I+W+A+I G A + R ++A ++ M +
Sbjct: 209 VDGLAKNGKVDEARRLFDCMP-ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASW 267
Query: 373 DVVYIGLL 380
+ + G +
Sbjct: 268 NTMITGFI 275
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 282/531 (53%), Gaps = 30/531 (5%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIK-TGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
S+ P A+ + K+IH++ ++ + L+ D ++ F + D A F+ M
Sbjct: 335 SILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYA--RFGDTSAAYWAFSLM 392
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
+ + SWN I+ AFA D + L + +E + + T S+LK C +
Sbjct: 393 STKDIISWNAILDAFA-----DSPKQFQFLNLLHHLLNEA-ITLDSVTILSLLKFCINVQ 446
Query: 137 RIQEGKEIHGFVVKLGLDNDE---FVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTK 193
I + KE+HG+ VK GL +DE + + L+ YA CG +E A+ +F
Sbjct: 447 GIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLG----------- 495
Query: 194 LVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFK 253
+ +R +V +N ++ G+V G ++ LF +M + +W++M+ YA++
Sbjct: 496 -LSERR----TLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPN 550
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVI 313
EA+ VF ++Q + PN +T++++LP ++L +L L + H Y + + D L ++
Sbjct: 551 EAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLL 609
Query: 314 DMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTD 373
D+YAKCGS++ A VF+ + +++ + ++A++ G A+HGR +AL Y M ++ + P
Sbjct: 610 DVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDH 668
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVL 433
V +L+AC HAGLI++G +++ + V G++P +E Y C VD V
Sbjct: 669 VFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVT 728
Query: 434 NMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVG 493
MP+ P+ IW LL AC + + +G VA L++ D+G++V +SN++A+ W G
Sbjct: 729 QMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEG 788
Query: 494 VVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEI 544
V+E+R MK+ +++K GCSW+E+DG + F+ D SHPR I ++ +
Sbjct: 789 VMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNAL 839
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 193/443 (43%), Gaps = 74/443 (16%)
Query: 23 IARCKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNP 79
+ C S+ L + +H K G I + +L + R D +K F QM++
Sbjct: 28 VKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD--DCQKMFRQMDSL 85
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
+ WN ++ + + E + FF M +P+ TF VL C ++G
Sbjct: 86 DPVVWNIVLTGLSVSCGR------ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSY 139
Query: 140 EGKEIHGFVVKLGLDNDEFVASNLVRMYAMCG---------------------------- 171
GK +H +++K GL+ D V + LV MYA G
Sbjct: 140 NGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGF 199
Query: 172 ----VMEDAYLLFS---------NYVS---------HFDNN---------STKLVRNKRM 200
+M DA+ F NY + D N + +V+ +
Sbjct: 200 SENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 201 QEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFH 260
Q V V N ++ ++R+G I + LF +M + +VSWNV+I+GYA N + +A +FH
Sbjct: 260 QTHVFVC-NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 261 DM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV-LGSAVIDMYAK 318
++ GDVSP+ +T++S+LP ++L L GK +H Y ++ ++D +G+A+I YA+
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 319 CGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIG 378
G A F + + K+ I+W+AI+ A + L+ + +T V +
Sbjct: 379 FGDTSAAYWAFS-LMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILS 437
Query: 379 LLSACSHAGLIEEGRSLFNHMVK 401
LL C + I + + + + VK
Sbjct: 438 LLKFCINVQGIGKVKEVHGYSVK 460
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 221/416 (53%), Gaps = 26/416 (6%)
Query: 26 CKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWN 85
C + QLKQIH IK L D L +++ S + +YA F Q+ +P+ F+WN
Sbjct: 30 CSNFSQLKQIHTKIIKHNLTNDQLLVRQLISV--SSSFGETQYASLVFNQLQSPSTFTWN 87
Query: 86 TIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIH 145
+IR+ + P EAL F M + ++FTFP V+KAC I+ G ++H
Sbjct: 88 LMIRSLSVN-----HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 146 GFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVV 205
G +K G ND F + L+ +Y CG + +F +M +
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF-----------------DKMPGRSI 185
Query: 206 VLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMG 265
V W M+ G V + ++ +FN+MP R+VVSW MI+ Y +N EA +F MQ+
Sbjct: 186 VSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD 245
Query: 266 DVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKA 325
DV PN T+V++L A ++LG+L +G+WVH YA KN +D LG+A+IDMY+KCGS++ A
Sbjct: 246 DVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDA 305
Query: 326 IQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYY-RKMQQAGVTPTDVVYIGLLSACS 384
+VF+ ++ K A TW+++I L +HG +AL + ++A V P + ++G+LSAC+
Sbjct: 306 RKVFDVMQGKSLA-TWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACA 364
Query: 385 HAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPD 440
+ G +++G F M++V GI P EH CM+ V +M PD
Sbjct: 365 NTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 169/568 (29%), Positives = 285/568 (50%), Gaps = 68/568 (11%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
Q+ + +KTGL D + + S S + AR+ F +M+ + SWN+++ ++
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSG--SFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 94 TDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGL 153
+ EA+ F M EG VE + +F SV+ C ++ ++IHG +K G
Sbjct: 253 EGTFGF----EAVVIFRDMMREG-VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY 307
Query: 154 DNDEFVASNLVRMYAMCGVME--------------------------DAYLLFSNYVSHF 187
++ V + L+ Y+ CGV+E DA +F N F
Sbjct: 308 ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNM--RF 365
Query: 188 DN---NSTKLVR-------NKRMQEGVVVLWNVMIDGFVRLGDIGAS------------- 224
D N V N++++EG+ + + GFV +G S
Sbjct: 366 DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALED 425
Query: 225 -RKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISR 283
+K F + R ++SWN MISG+AQNGF EA+ +F + PN T SVL AI+
Sbjct: 426 AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAF 484
Query: 284 LG--ALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITW 341
+++ G+ H + K + V+ SA++DMYAK G+++++ +VF ++ ++KN W
Sbjct: 485 AEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM-SQKNQFVW 543
Query: 342 SAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
++II + HG ++ + KM + V P V ++ +L+AC+ G++++G +FN M++
Sbjct: 544 TSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE 603
Query: 402 VVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGE 461
V +EP EHY CMVD + +P P + + +++LG+C++HGNVKMG
Sbjct: 604 VYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGA 663
Query: 462 RVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDG-- 519
+VA M++ P SGSYV + NI+A + W E+R M++ +V K+ G SWI++
Sbjct: 664 KVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTE 723
Query: 520 ---VIHEFLVEDESHPRAKEIRSMLEEI 544
+ F D+SHP++ EI M+E I
Sbjct: 724 GSLTMQGFSSGDKSHPKSDEIYRMVEII 751
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 166/383 (43%), Gaps = 67/383 (17%)
Query: 29 IKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTII 88
+K+ QIH +G + ++ + R D A F + +P+ SWNTI+
Sbjct: 92 LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFD--NALCIFENLVDPDVVSWNTIL 149
Query: 89 RAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFV 148
F DD+ AL F +M S G+V + FT+ + L C G ++ V
Sbjct: 150 SGF---DDNQI-----ALNFVVRMKSAGVV-FDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 149 VKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLW 208
VK GL++D V ++ + MY+ G A
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGA-------------------------------- 228
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFK-EAMDVFHDMQMGDV 267
R++F++M + ++SWN ++SG +Q G F EA+ +F DM V
Sbjct: 229 ----------------RRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV 272
Query: 268 SPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQ 327
++++ SV+ L+L + +H K E +G+ ++ Y+KCG +E
Sbjct: 273 ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 328 VFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAG 387
VF ++ +++N ++W+ +I +DA+ + M+ GV P +V ++GL++A
Sbjct: 333 VFHQM-SERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE 386
Query: 388 LIEEGRSLFNHMVKVVGI-EPRV 409
I+EG + +K + EP V
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSV 409
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 146/329 (44%), Gaps = 60/329 (18%)
Query: 27 KSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNT 86
+ IK+ +IH IKTG + +P + + + L+ A+K F + SWN
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEA--LEDAKKAFEDITFREIISWNA 443
Query: 87 IIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI--QEGKEI 144
+I FA+ EAL F +E + PN +TF SVL A A I ++G+
Sbjct: 444 MISGFAQNGFSH-----EALKMFLSAAAETM--PNEYTFGSVLNAIAFAEDISVKQGQRC 496
Query: 145 HGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGV 204
H ++KLGL++ V+S L+ MYA G
Sbjct: 497 HAHLLKLGLNSCPVVSSALLDMYAKRG--------------------------------- 523
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
+I S K+FN+M Q++ W +IS Y+ +G F+ M++FH M
Sbjct: 524 ---------------NIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK 568
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWV-HLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
+V+P+ +T +SVL A +R G ++ G + ++ E +E S ++DM + G ++
Sbjct: 569 ENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLK 628
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHG 352
+A ++ ++ +++G +HG
Sbjct: 629 EAEELMSEVPGGPGESMLQSMLGSCRLHG 657
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 177/665 (26%), Positives = 313/665 (47%), Gaps = 80/665 (12%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
K IH++ I G+ + + ++ F S + ++ A + + F W +++ F
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK--MEDAVRVLNSSGEQDVFLWTSVVSGFV 301
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
EA+G F +M S GL +PN FT+ ++L C+ + + GK+IH +K+G
Sbjct: 302 RN-----LRAKEAVGTFLEMRSLGL-QPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVG 355
Query: 153 LDNDEFVASNLVRMYAMC--------------------------------GVMEDAYLLF 180
++ V + LV MY C G ++D + L
Sbjct: 356 FEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLL 415
Query: 181 SNYV-----------SHFDNNSTKLVRNKRMQE-----------GVVVLWNVMIDGFVRL 218
V S +KL +R+ E G +V+ N ++D +
Sbjct: 416 MEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASS 475
Query: 219 GDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVL 278
+ + + M +R +++ +++ + + G + A+ V + M + + ++L +
Sbjct: 476 RKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFI 535
Query: 279 PAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNA 338
A + LGALE GK +H Y+ K+ + ++++DMY+KCGS+E A +VFE+I +
Sbjct: 536 SASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP-DV 594
Query: 339 ITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNH 398
++W+ ++ GLA +G + AL + +M+ P V ++ LLSACS+ L + G F
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQV 654
Query: 399 MVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVK 458
M K+ IEP+VEHY +V V M ++P+ +I+K LL AC+ GN+
Sbjct: 655 MKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLS 714
Query: 459 MGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEID 518
+GE +A + L P D Y+ L++++ G + R M E + K G S +E+
Sbjct: 715 LGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQ 774
Query: 519 GVIHEFLVEDESH-PRAKEIRSMLEEISNRIRSAG--YRPNITQVLLNMDEEKKESALHY 575
G +H F+ ED + + I + +E I I+ G YR N E+A +
Sbjct: 775 GKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGN-------------ENA-SF 820
Query: 576 HSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEK 635
HS + A+ +G I P+ P+ +VKN +C+DCH + +++ + +KI VRD + H F+
Sbjct: 821 HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKN 880
Query: 636 GVCSC 640
G CSC
Sbjct: 881 GECSC 885
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 186/425 (43%), Gaps = 59/425 (13%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
IH IK GL+ + +L +D + ARK F +M++ F+W +I AF +
Sbjct: 44 HIHCPVIKFGLLENLDLCNNLLSLYLKTD--GIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 94 TDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGL 153
+ + AL F +M + G PN FTF SV+++CA + I G +HG V+K G
Sbjct: 102 SQE-----FASALSLFEEMMASG-THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF 155
Query: 154 DNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMID 213
+ + V S+L +Y+ CG ++A LFS+
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSS------------------------------- 184
Query: 214 GFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYIT 273
+ +SW +MIS ++EA+ + +M V PN T
Sbjct: 185 -----------------LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT 227
Query: 274 LVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE 333
V +L A S LG LE GK +H I ++ VL ++++D Y++ +E A++V
Sbjct: 228 FVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS-S 285
Query: 334 NKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGR 393
+++ W++++ G + RA +A+ + +M+ G+ P + Y +LS CS ++ G+
Sbjct: 286 GEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGK 345
Query: 394 SLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKM 453
+ + +K VG E + +VD V + P+ V W L+
Sbjct: 346 QIHSQTIK-VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVD 404
Query: 454 HGNVK 458
HG V+
Sbjct: 405 HGFVQ 409
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 166/377 (44%), Gaps = 64/377 (16%)
Query: 14 THPSSL-FPQIAR-CKSIKQLK---QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKY 68
THP+ F + R C ++ + ++H IKTG G+ + + + S + K
Sbjct: 120 THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ--FKE 177
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
A + F+ + N + SW +I + + EAL F+ +M G V PN FTF +
Sbjct: 178 ACELFSSLQNADTISWTMMISSLVGA-----RKWREALQFYSEMVKAG-VPPNEFTFVKL 231
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD 188
L A + +G ++ GK IH ++ G+ + + ++LV Y+ MEDA +
Sbjct: 232 LGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVL-------- 282
Query: 189 NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
NS+ E V LW ++ GFVR
Sbjct: 283 -NSSG--------EQDVFLWTSVVSGFVR------------------------------- 302
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVL 308
N KEA+ F +M+ + PN T ++L S + +L+ GK +H K E +
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 309 GSAVIDMYAKCGSVE-KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQA 367
G+A++DMY KC + E +A +VF + + N ++W+ +I GL HG D +M +
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVS-PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR 421
Query: 368 GVTPTDVVYIGLLSACS 384
V P V G+L ACS
Sbjct: 422 EVEPNVVTLSGVLRACS 438
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 182/437 (41%), Gaps = 67/437 (15%)
Query: 23 IARCKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNP 79
++ C +++ L KQIH+ IK G ++ +++ A + F M +P
Sbjct: 332 LSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVE-ASRVFGAMVSP 390
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
N SW T+I D+ + G +M VEPN T VL+AC+K+ ++
Sbjct: 391 NVVSWTTLILGLV-----DHGFVQDCFGLLMEMVKRE-VEPNVVTLSGVLRACSKLRHVR 444
Query: 140 EGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY-----------LLFSNYVSHFD 188
EIH ++++ +D + V ++LV YA ++ A+ + +++ V+ F+
Sbjct: 445 RVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFN 504
Query: 189 N----------------------------------NSTKLVRNKRMQ--------EGVVV 206
N L K + G
Sbjct: 505 ELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAAS 564
Query: 207 LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD 266
+ N ++D + + G + ++K+F ++ VVSWN ++SG A NGF A+ F +M+M +
Sbjct: 565 VLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKE 624
Query: 267 VSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKA 325
P+ +T + +L A S +LG ++ + + IE ++ + + G +E+A
Sbjct: 625 TEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEA 684
Query: 326 IQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTD-VVYIGLLSACS 384
V E + K NA+ + ++ A R N +L + + P+D +YI L
Sbjct: 685 TGVVETMHLKPNAMIFKTLL--RACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYD 742
Query: 385 HAGLIEEGRSLFNHMVK 401
+G E + N M +
Sbjct: 743 ESGKPELAQKTRNLMTE 759
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/484 (31%), Positives = 241/484 (49%), Gaps = 22/484 (4%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
AR F +M N +W +I + + + + G F +M EG V+ N T +
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFE-----DGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS-----NY 183
KAC R +EG +IHG V ++ L+ D F+ ++L+ MY+ G M +A +F +
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS 341
Query: 184 VSHFDNNSTKLVRNKRMQEGV----------VVLWNVMIDGFVRLGDIGASRKLFNKMPQ 233
VS +++ T LV+ K++ E +V W MI GF G+I +LF MP+
Sbjct: 342 VS-WNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPE 400
Query: 234 RSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWV 293
+ ++W MIS + NG+++EA+ FH M +V PN T SVL A + L L G +
Sbjct: 401 KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI 460
Query: 294 HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGR 353
H K I D + ++++ MY KCG+ A ++F I ++ N ++++ +I G + +G
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI-SEPNIVSYNTMISGYSYNGF 519
Query: 354 ANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYG 413
AL + ++ +G P V ++ LLSAC H G ++ G F M IEP +HY
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYA 579
Query: 414 CMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPH 473
CMVD + MP +P +W +LL A K H V + E A+ L++L P
Sbjct: 580 CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPD 639
Query: 474 DSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPR 533
+ YV LS +++ G + K ++KDPG SWI + G +H FL DES
Sbjct: 640 SATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLN 699
Query: 534 AKEI 537
+EI
Sbjct: 700 LEEI 703
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 158/352 (44%), Gaps = 35/352 (9%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
+L+ A F QM+N + SW +I A+AE +A F +M N
Sbjct: 65 NLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMS-----KAWQVFDEMPVRVTTSYNAMI 119
Query: 125 FPSVLKACAKMGRIQE-------------GKEIHGFVVKLGLDNDEFVASNL---VRMYA 168
+ C +G+ E I GFV D EF+ + R
Sbjct: 120 TAMIKNKC-DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSV 178
Query: 169 MCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLF 228
V+ YL + N + ++ + ++E VV + M+ G+ ++G I +R LF
Sbjct: 179 ASNVLLSGYLRAGKW-----NEAVRVFQGMAVKE--VVSCSSMVHGYCKMGRIVDARSLF 231
Query: 229 NKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGAL 287
++M +R+V++W MI GY + GFF++ +F M Q GDV N TL + A
Sbjct: 232 DRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRY 291
Query: 288 ELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGG 347
G +H + +E D LG++++ MY+K G + +A VF ++N K++++W+++I G
Sbjct: 292 REGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN-KDSVSWNSLITG 350
Query: 348 LAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
L + ++A + + KM + V + ++ S G I + LF M
Sbjct: 351 LVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMM 398
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 172/595 (28%), Positives = 294/595 (49%), Gaps = 71/595 (11%)
Query: 15 HPSSLFPQ-IARCKSIKQLK----QIHAHFIKTGLIGDPLAAAEILKFLSVSDRR--DLK 67
H + L P+ I +SI +LK QIHA I TG + L + I + L S R ++
Sbjct: 11 HRTLLCPKRIKFLQSISKLKRHITQIHAFVISTG---NLLNGSSISRDLIASCGRIGEIS 67
Query: 68 YARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPS 127
YARK F ++ +N++I ++ KNP E L + QM +E ++P+ TF
Sbjct: 68 YARKVFDELPQRGVSVYNSMIVVYSRG-----KNPDEVLRLYDQMIAEK-IQPDSSTFTM 121
Query: 128 VLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL-------- 179
+KAC +++G+ + V G ND FV S+++ +Y CG M++A +L
Sbjct: 122 TIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRD 181
Query: 180 ---FSNYVSHF------------------------------------DNNSTKLVRNKR- 199
++ V+ F D TK+ R+
Sbjct: 182 VICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHG 241
Query: 200 --MQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKE 254
+ G+ VV+ ++D + ++G I + ++F++M ++ VSW +ISG+AQNG +
Sbjct: 242 YLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANK 301
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
A + +MQ P+ +TLV VL A S++G+L+ G+ VH Y K + +D V +A++D
Sbjct: 302 AFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMD 360
Query: 315 MYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
MY+KCG++ + ++FE + +K+ + W+ +I +HG + + + KM ++ + P
Sbjct: 361 MYSKCGALSSSREIFEHV-GRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHA 419
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLN 434
+ LLSA SH+GL+E+G+ F+ M+ I+P +HY C++D + +
Sbjct: 420 TFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINS 479
Query: 435 MPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGV 494
+ IW ALL C H N+ +G+ A +++L P G +SN FA+ W V
Sbjct: 480 EKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEV 539
Query: 495 VEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR 549
+VR M+ + K PG S IE++G + FL+ED SH + +L + IR
Sbjct: 540 AKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 274/556 (49%), Gaps = 70/556 (12%)
Query: 19 LFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNN 78
L + C+ ++ +IH + +KTGL D A +++L F SV D++YA F ++N
Sbjct: 31 LINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSV---LDIRYASSIFEHVSN 87
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
N F +NT+IR ++ +D+ P A F Q+ ++GL +RF+F + LK+C++ +
Sbjct: 88 TNLFMFNTMIRGYSISDE-----PERAFSVFNQLRAKGLT-LDRFSFITTLKSCSRELCV 141
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDA------------YLLFSNYVSH 186
G+ +HG ++ G + + L+ Y +CG + DA + FS ++
Sbjct: 142 SIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNG 201
Query: 187 FDNNSTK-----LVRNKRMQEGVVV----------------------------------- 206
+ S K L R R E VV
Sbjct: 202 YLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLD 261
Query: 207 --LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
L +I + + G I ++R++F+ ++ VV+WN MI YA+ G +E + + M+
Sbjct: 262 LHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKY 321
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEK 324
+ PN T V +L + + A +G+ V E+ I +D +LG+A++DMYAK G +EK
Sbjct: 322 EKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEK 381
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG--VTPTDVVYIGLLSA 382
A+++F ++++K + +W+A+I G HG A +A+ + KM++ V P ++ ++ +L+A
Sbjct: 382 AVEIFNRMKDK-DVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNA 440
Query: 383 CSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV 442
CSH GL+ EG F MV+ P+VEHYGC+VD + N+PI D
Sbjct: 441 CSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDST 500
Query: 443 IWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMK 502
W+ALL AC+++GN +GE V L ++ + L+ A GN E L +
Sbjct: 501 AWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN----PEKSLDNE 556
Query: 503 EMDVRKDPGCSWIEID 518
RK+ G S IEI+
Sbjct: 557 LNKGRKEAGYSAIEIE 572
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/577 (27%), Positives = 281/577 (48%), Gaps = 65/577 (11%)
Query: 26 CKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCF 82
C ++++ + IH K +G L L ++ + R ++ A + F ++ P+
Sbjct: 51 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIE-ALRMFDELEKPDIV 109
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
+W++++ F + +P +A+ FF +M V P+R T +++ AC K+ + G+
Sbjct: 110 TWSSMVSGFEKNG-----SPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 164
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF---------------SNYVSHF 187
+HGFV++ G ND + ++L+ YA ++A LF + YV +
Sbjct: 165 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 224
Query: 188 DNNSTKLVRNKRMQEGV--------------------------------------VVLWN 209
LV N M +G V +
Sbjct: 225 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 284
Query: 210 VMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM-GDVS 268
++D +++ + +F+++P++ VVSW +ISG+ NG +++ F M + +
Sbjct: 285 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 344
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQV 328
P+ I +V VL + S LG LE K H Y K + + +G++++++Y++CGS+ A +V
Sbjct: 345 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 404
Query: 329 FEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM-QQAGVTPTDVVYIGLLSACSHAG 387
F I K+ + W+++I G +HG+ AL+ + M + + V P +V ++ +LSACSHAG
Sbjct: 405 FNGIA-LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 463
Query: 388 LIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKAL 447
LI EG +F MV + P +EHY +VD MP P I L
Sbjct: 464 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTL 523
Query: 448 LGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVR 507
LGAC++H N +M E VA+ L +L + +G Y+ +SN++ +G W V ++R +K+ ++
Sbjct: 524 LGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIK 583
Query: 508 KDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEI 544
K S IEI +H F+ +DE HP + + +L+E+
Sbjct: 584 KGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 620
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 178/382 (46%), Gaps = 59/382 (15%)
Query: 76 MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKM 135
M + + WNT++++ + K E L F M + +P+ FT P LKAC ++
Sbjct: 1 MTKRSLYQWNTLLKSLSRE-----KQWEEVLYHFSHMFRDE-EKPDNFTLPVALKACGEL 54
Query: 136 GRIQEGKEIHGFVVK-LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKL 194
+ G+ IHGFV K + L +D +V S+L+ MY CG
Sbjct: 55 REVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCG----------------------- 91
Query: 195 VRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKE 254
RM E + ++F+++ + +V+W+ M+SG+ +NG +
Sbjct: 92 ----RMIEAL---------------------RMFDELEKPDIVTWSSMVSGFEKNGSPYQ 126
Query: 255 AMDVFHDMQMG-DVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVI 313
A++ F M M DV+P+ +TL++++ A ++L LG+ VH + + D L ++++
Sbjct: 127 AVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLL 186
Query: 314 DMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTD 373
+ YAK + ++A+ +F+ I +K+ I+WS +I +G A +AL + M G P
Sbjct: 187 NCYAKSRAFKEAVNLFKMIA-EKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNV 245
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVL 433
+ +L AC+ A +E+GR ++ G+E V+ +VD
Sbjct: 246 ATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTALVDMYMKCFSPEEAYAVFS 304
Query: 434 NMPIRPDDVIWKALLGACKMHG 455
+P R D V W AL+ ++G
Sbjct: 305 RIP-RKDVVSWVALISGFTLNG 325
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 144/361 (39%), Gaps = 61/361 (16%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRD 65
EP AT + A ++Q ++ H I+ GL + + ++ +
Sbjct: 242 EPNVAT----VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE 297
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
YA F+++ + SW +I F T + +E F M E P+
Sbjct: 298 EAYA--VFSRIPRKDVVSWVALISGF--TLNGMAHRSIEE---FSIMLLENNTRPDAILM 350
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVS 185
VL +C+++G +++ K H +V+K G D++ F+ ++LV +Y+ CG + +A
Sbjct: 351 VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA--------- 401
Query: 186 HFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISG 245
K+FN + + V W +I+G
Sbjct: 402 ---------------------------------------SKVFNGIALKDTVVWTSLITG 422
Query: 246 YAQNGFFKEAMDVF-HDMQMGDVSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIE 303
Y +G +A++ F H ++ +V PN +T +S+L A S G + G + L +
Sbjct: 423 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 482
Query: 304 IDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRK 363
+ + ++D+ + G ++ AI++ +++ ++G +H A +K
Sbjct: 483 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 542
Query: 364 M 364
+
Sbjct: 543 L 543
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/529 (30%), Positives = 253/529 (47%), Gaps = 67/529 (12%)
Query: 33 KQIHAHFIKTGL-----IGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTI 87
K IHA I +G +G+ L + SVS R F M++ N + +
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVS-------GRGVFDGMSHRNVITLTAV 227
Query: 88 IRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGF 147
I E + + + L F M GLV PN T+ S L AC+ RI EG++IH
Sbjct: 228 ISGLIENELHE-----DGLRLFSLM-RRGLVHPNSVTYLSALAACSGSQRIVEGQQIHAL 281
Query: 148 VVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVL 207
+ K G++++ + S L
Sbjct: 282 LWKYGIESELCIESAL-------------------------------------------- 297
Query: 208 WNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDV 267
+D + + G I + +F + VS V++ G AQNG +EA+ F M V
Sbjct: 298 ----MDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGV 353
Query: 268 SPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQ 327
+ + +VL +L LGK +H K + + + + +I+MY+KCG + +
Sbjct: 354 EIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQT 413
Query: 328 VFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAG 387
VF ++ K+N ++W+++I A HG AL Y +M V PTDV ++ LL ACSH G
Sbjct: 414 VFRRMP-KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVG 472
Query: 388 LIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKAL 447
LI++GR L N M +V GIEPR EHY C++D + ++P++PD IW+AL
Sbjct: 473 LIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQAL 532
Query: 448 LGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVR 507
LGAC HG+ ++GE A L + P S +++ ++NI++SRG W + +MK M V
Sbjct: 533 LGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVT 592
Query: 508 KDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPN 556
K+ G S IEI+ H F+VED+ HP+A+ I +L + + GYRP+
Sbjct: 593 KETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPD 641
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 200 MQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVF 259
+ +V+WN ++ + + G + + KLF++MP R V+S N++ G+ +N + +
Sbjct: 85 IHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLL 144
Query: 260 HDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC 319
M +G ++ TL VL + K +H A + + + +G+ +I Y KC
Sbjct: 145 KRM-LGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKC 203
Query: 320 GSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGL 379
G VF+ + + +N IT +A+I GL + D L + M++ V P V Y+
Sbjct: 204 GCSVSGRGVFDGMSH-RNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSA 262
Query: 380 LSACSHAGLIEEGRSLFNHMVKVVGIEPRV 409
L+ACS + I EG+ + + K GIE +
Sbjct: 263 LAACSGSQRIVEGQQIHALLWK-YGIESEL 291
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/564 (28%), Positives = 270/564 (47%), Gaps = 64/564 (11%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+ +HA+ +KT L+ + +L + D + + F++M N +W II
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID--KSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 93 ETDDDDYKNPLEALGFFGQMC-SEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
YK E L +F +M SE L + +TF LKACA + +++ GK IH V+
Sbjct: 186 HAGR--YK---EGLTYFSEMSRSEEL--SDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 152 GLDNDEFVASNLVRMYAMCGVMEDAYLLFSN----------------------------- 182
G VA++L MY CG M+D LF N
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETF 298
Query: 183 --------------YVSHFDNNST--KLVRNKRMQEGVVVLW--------NVMIDGFVRL 218
+ S F ++ +LV +++ V+ L N M+ +
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC 358
Query: 219 GDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVL 278
G++ ++ LF M R ++SW+ +I GY Q GF +E F M+ P L S+L
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLL 418
Query: 279 PAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNA 338
+ +E G+ VH A +E + + S++I+MY+KCGS+++A +F + + + +
Sbjct: 419 SVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD-RDDI 477
Query: 339 ITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNH 398
++ +A+I G A HG++ +A+D + K + G P V +I +L+AC+H+G ++ G FN
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNM 537
Query: 399 MVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVK 458
M + + P EHYGCMVD + M + DDV+W LL ACK G+++
Sbjct: 538 MQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIE 597
Query: 459 MGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEID 518
G R A +++L P + + V L+NI++S GN VR MK V K+PG S I+I
Sbjct: 598 RGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIK 657
Query: 519 GVIHEFLVEDESHPRAKEIRSMLE 542
+ F+ D HP++++I ++LE
Sbjct: 658 DCVSAFVSGDRFHPQSEDIYNILE 681
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 169/386 (43%), Gaps = 62/386 (16%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQM-CSEGLVEPNRF 123
+L+ AR+ F +M + + SW +II+ + ++ D EAL F M + V P+
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSD-----EALILFSAMRVVDHAVSPDTS 109
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS-- 181
VLKAC + I G+ +H + VK L + +V S+L+ MY G ++ + +FS
Sbjct: 110 VLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 182 ---NYVSHFDNNSTKLVRNKRMQEGVV--------------------------------- 205
N V+ + T LV R +EG+
Sbjct: 170 PFRNAVT-WTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYG 228
Query: 206 --VLWNVMIDGFV--------------RLGDIGASRKLFNKMPQRSVVSWNVMISGYAQN 249
+ +V++ GFV G++ LF M +R VVSW +I Y +
Sbjct: 229 KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRI 288
Query: 250 GFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG 309
G +A++ F M+ V PN T S+ A + L L G+ +H + +
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS 348
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV 369
++++ MY+ CG++ A +F+ + ++ I+WS IIGG G + Y+ M+Q+G
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMRC-RDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGT 407
Query: 370 TPTDVVYIGLLSACSHAGLIEEGRSL 395
PTD LLS + +IE GR +
Sbjct: 408 KPTDFALASLLSVSGNMAVIEGGRQV 433
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 106/194 (54%), Gaps = 3/194 (1%)
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD-- 266
N + + G++ A+R++F+KMP +VSW +I Y EA+ +F M++ D
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 267 VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAI 326
VSP+ L VL A + + G+ +H YA K + +GS+++DMY + G ++K+
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 327 QVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
+VF ++ + NA+TW+AII GL GR + L Y+ +M ++ + L AC+
Sbjct: 164 RVFSEMPFR-NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 387 GLIEEGRSLFNHMV 400
++ G+++ H++
Sbjct: 223 RQVKYGKAIHTHVI 236
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 262/503 (52%), Gaps = 41/503 (8%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSE-GLVEPNRF 123
D++ A + F +M N SW +I FA ++ Y+ EAL F +M + V PN
Sbjct: 246 DVREAYRLFCEMPERNIVSWTAMISGFAW--NELYR---EALMLFLEMKKDVDAVSPNGE 300
Query: 124 TFPSVLKACAKMG----RIQEGKEIHGFVVKLG---LDNDEFVASNLVRMYAMCGVMEDA 176
T S+ AC +G R+ G+++H V+ G +D+D +A +LV MYA G++ A
Sbjct: 301 TLISLAYACGGLGVEFRRL--GEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASA 358
Query: 177 YLLFSNYVSHFDNNSTKLVRNKRMQEGVV----------------VLWNVMIDGFVRLGD 220
L + FD S ++ N+ ++ G + V W MIDG++ GD
Sbjct: 359 QSLLNE---SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGD 415
Query: 221 IGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPA 280
+ + LF K+ + V+W VMISG QN F EA + DM + P T +L +
Sbjct: 416 VSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSS 475
Query: 281 ISRLGALELGKWVHLYAEKNEI--EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNA 338
L+ GK +H K + D +L ++++ MYAKCG++E A ++F K+ +K+
Sbjct: 476 AGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMV-QKDT 534
Query: 339 ITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNH 398
++W+++I GL+ HG A+ AL+ +++M +G P V ++G+LSACSH+GLI G LF
Sbjct: 535 VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKA 594
Query: 399 MVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVK 458
M + I+P ++HY M+D + +P PD ++ ALLG C ++ K
Sbjct: 595 MKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDK 654
Query: 459 ----MGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSW 514
+ ER A L++L P ++ +VAL N++A G E+R +M V+K PGCSW
Sbjct: 655 DAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSW 714
Query: 515 IEIDGVIHEFLVEDESHPRAKEI 537
+ ++G + FL D+S A ++
Sbjct: 715 VVVNGRANVFLSGDKSASEAAQM 737
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 62/285 (21%)
Query: 121 NRFTF-PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL 179
NR + S+L AK G + E + + ++ + + + ++ Y C M +A+ L
Sbjct: 75 NRVVYWTSLLSKYAKTGYLDEAR----VLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTL 130
Query: 180 F----SNYVSHFDNNSTKLVRNKRMQEGV----------VVLWNVMIDGFVRLGDIGASR 225
F N VS + T L + R ++ V VV WN ++ G +R GD+ ++
Sbjct: 131 FREMPKNVVS-WTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAK 189
Query: 226 KLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLG 285
++F+ MP R VVSWN MI GY +N +EA +F DM
Sbjct: 190 QVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDM----------------------- 226
Query: 286 ALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAII 345
+EKN V ++++ Y + G V +A ++F ++ ++N ++W+A+I
Sbjct: 227 -----------SEKNV-----VTWTSMVYGYCRYGDVREAYRLFCEMP-ERNIVSWTAMI 269
Query: 346 GGLAMHGRANDALDYYRKMQQ--AGVTPTDVVYIGLLSACSHAGL 388
G A + +AL + +M++ V+P I L AC G+
Sbjct: 270 SGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 130/280 (46%), Gaps = 37/280 (13%)
Query: 137 RIQEGKEIHGF-----VVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNS 191
R+ EG +H + + G N ++L+ YA G +++A +LF
Sbjct: 52 RLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLF----------- 100
Query: 192 TKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
+ M E +V N M+ G+V+ + + LF +MP ++VVSW VM++ +G
Sbjct: 101 ------EVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGR 153
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
++A+++F +M N ++ +++ + R G +E K V ++ V +A
Sbjct: 154 SEDAVELFDEMP----ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNA 205
Query: 312 VIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
+I Y + +E+A +F + ++KN +TW++++ G +G +A + +M + +
Sbjct: 206 MIKGYIENDGMEEAKLLFGDM-SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI-- 262
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVK-VVGIEPRVE 410
V + ++S + L E LF M K V + P E
Sbjct: 263 --VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGE 300
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/544 (28%), Positives = 272/544 (50%), Gaps = 32/544 (5%)
Query: 5 CEPTTATRP--THPSSLFPQIARCKSI---KQLKQIHAHFIKTGLIGDPLAAAEILKFLS 59
C + A RP S + ++ C +Q+H I+ G D ++ + +
Sbjct: 119 CYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYT 178
Query: 60 VSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDD-DDYKNPLEALGFFGQMCSEGLV 118
D +++ ARK F +M+ + SWN++I ++++ +D K +A+ CS+
Sbjct: 179 KCD--NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAM----LACSD--F 230
Query: 119 EPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYL 178
+PN T SV +AC + + G E+H +++ + D + + ++ YA CG ++ A
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARA 290
Query: 179 LFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVS 238
LF M E V + +I G++ G + + LF++M + +
Sbjct: 291 LF-----------------DEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLST 333
Query: 239 WNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAE 298
WN MISG QN +E ++ F +M PN +TL S+LP+++ L+ GK +H +A
Sbjct: 334 WNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAI 393
Query: 299 KNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDAL 358
+N + + + +++ID YAK G + A +VF+ +++ + I W+AII A+HG ++ A
Sbjct: 394 RNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDR-SLIAWTAIITAYAVHGDSDSAC 452
Query: 359 DYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDX 418
+ +MQ G P DV +LSA +H+G + + +F+ M+ IEP VEHY CMV
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 419 XXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSY 478
+ MPI P +W ALL + G++++ L ++ P ++G+Y
Sbjct: 513 LSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNY 572
Query: 479 VALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIR 538
++N++ G W VR KMK + ++K PG SWIE + + F+ +D S R+KE+
Sbjct: 573 TIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMY 632
Query: 539 SMLE 542
++E
Sbjct: 633 EIIE 636
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 57/367 (15%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
Q+HA + + D A++++ F + DR + A F ++ N FS+N ++ A+
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDR--FRQALHVFDEITVRNAFSYNALLIAY-- 98
Query: 94 TDDDDYKNPLEA-LGFFGQMC-SEGLVEPNRFTFPSVLKA---CAKMGRIQEGKEIHGFV 148
T + Y + L + G C S P+ + VLKA C +++HGFV
Sbjct: 99 TSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 149 VKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLW 208
++ G D+D FV + ++ Y C +E A +F M E VV W
Sbjct: 159 IRGGFDSDVFVGNGMITYYTKCDNIESARKVF-----------------DEMSERDVVSW 201
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
N MI G+ + G +K++ M + D
Sbjct: 202 NSMISGYSQSGSFEDCKKMYKAM------------------------------LACSDFK 231
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQV 328
PN +T++SV A + L G VH +N I++D L +AVI YAKCGS++ A +
Sbjct: 232 PNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARAL 291
Query: 329 FEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGL 388
F+++ ++K+++T+ AII G HG +A+ + +M+ G++ + + GL+ H +
Sbjct: 292 FDEM-SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEV 350
Query: 389 IEEGRSL 395
I R +
Sbjct: 351 INSFREM 357
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 207 LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVF-----HD 261
L + +I + R + +F+++ R+ S+N ++ Y + +A +F
Sbjct: 59 LASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSS 118
Query: 262 MQMGDVS-PNYITLVSVLPAISRLGALELG---KWVHLYAEKNEIEIDDVLGSAVIDMYA 317
D + P+ I++ VL A+S LG + VH + + + D +G+ +I Y
Sbjct: 119 CYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYT 178
Query: 318 KCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQ-AGVTPTDVVY 376
KC ++E A +VF+++ ++++ ++W+++I G + G D Y+ M + P V
Sbjct: 179 KCDNIESARKVFDEM-SERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTV 237
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVK 401
I + AC + + G + M++
Sbjct: 238 ISVFQACGQSSDLIFGLEVHKKMIE 262
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 157/599 (26%), Positives = 277/599 (46%), Gaps = 73/599 (12%)
Query: 17 SSLFPQIARCKSIKQL---KQIHAHFIKTGLIGD-PLAAAEILKFLSVSDRRDLKYARKF 72
++ + RC K +QIH ++ G + D P A ++ + + L
Sbjct: 61 ATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYA---KCGLMRRAVL 117
Query: 73 FTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
+ + F +N +I F +PL+A+ + +M + G++ P+++TFPS+LK
Sbjct: 118 VFGGSERDVFGYNALISGFVVN-----GSPLDAMETYREMRANGIL-PDKYTFPSLLKGS 171
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF------------ 180
M + + K++HG KLG D+D +V S LV Y+ +EDA +F
Sbjct: 172 DAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLW 230
Query: 181 ----SNYVSHFDNNSTKLVRNKRMQEGV-------------------------------- 204
+ Y F LV +K +EGV
Sbjct: 231 NALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVK 290
Query: 205 ------VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDV 258
+V+ N +ID + + + + +F M +R + +WN ++ + G + +
Sbjct: 291 TGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLAL 350
Query: 259 FHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLY----AEKNEIEIDDVLGSAVID 314
F M + P+ +TL +VLP RL +L G+ +H Y N ++ + ++++D
Sbjct: 351 FERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMD 410
Query: 315 MYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
MY KCG + A VF+ + K +A +W+ +I G + ALD + M +AGV P ++
Sbjct: 411 MYVKCGDLRDARMVFDSMRVKDSA-SWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEI 469
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLN 434
++GLL ACSH+G + EGR+ M V I P +HY C++D ++
Sbjct: 470 TFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAIS 529
Query: 435 MPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGV 494
PI + V+W+++L +C++HGN + + L +L P G YV +SN++ G + V
Sbjct: 530 KPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEV 589
Query: 495 VEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGY 553
++VR M++ +V+K PGCSWI + +H F +++HP K I L + + + Y
Sbjct: 590 LDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEY 648
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 55/285 (19%)
Query: 121 NRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG-LDNDEFVASNLVRMYAMCGVMEDAYLL 179
N T + L+ CA+ G++IHGF+V+ G LD+ ++LV MYA CG+M A L+
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSW 239
F G S +R V +
Sbjct: 119 F-----------------------------------------GGS--------ERDVFGY 129
Query: 240 NVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG--KWVHLYA 297
N +ISG+ NG +AM+ + +M+ + P+ T S+L A+EL K VH A
Sbjct: 130 NALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSD---AMELSDVKKVHGLA 186
Query: 298 EKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDA 357
K + D +GS ++ Y+K SVE A +VF+++ ++ +++ W+A++ G + R DA
Sbjct: 187 FKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDA 246
Query: 358 LDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV 402
L + KM++ GV + +LSA + +G I+ GRS+ VK
Sbjct: 247 LLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKT 291
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 263/549 (47%), Gaps = 64/549 (11%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
AR F +M + + +W +I +A ++ + A F +M +G PN FT SV
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYN-----ARAWECFHEMVKQG-TSPNEFTLSSV 117
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFV--------ASNLVRMYAMCGVMED----- 175
LK+C M + G +HG VVKLG++ +V A+ V M A C + D
Sbjct: 118 LKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKN 177
Query: 176 --AYLLFSNYVSHFDNNSTKLVRNKRM--------------------------------- 200
+ +H + L K+M
Sbjct: 178 DVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHA 237
Query: 201 -------QEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFK 253
Q + V+ N ++D + R G + ++ F++M + +++WN +IS ++
Sbjct: 238 SVIKRGFQSNLPVM-NSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-S 295
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVI 313
EA+ +F + PN T S++ A + + AL G+ +H + + L +A+I
Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALI 355
Query: 314 DMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTD 373
DMYAKCG++ + +VF +I +++N ++W++++ G HG +A++ + KM +G+ P
Sbjct: 356 DMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDR 415
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVL 433
+V++ +LSAC HAGL+E+G FN M GI P + Y C+VD V
Sbjct: 416 IVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVE 475
Query: 434 NMPIRPDDVIWKALLGACKMHGNVKMGERV-ARTLMKLFPHDSGSYVALSNIFASRGNWV 492
MP +PD+ W A+LGACK H + + R+ AR +M+L P G+YV LS I+A+ G WV
Sbjct: 476 RMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWV 535
Query: 493 GVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAG 552
VR M+ M +K+ G SWI ++ + F V D+ P A + S+L + R AG
Sbjct: 536 DFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAG 595
Query: 553 YRPNITQVL 561
Y P + ++
Sbjct: 596 YVPELDSLV 604
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 145/329 (44%), Gaps = 57/329 (17%)
Query: 24 ARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFS 83
A S+ KQIHA IK G + IL L A+ +F +M + + +
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGY--LSEAKHYFHEMEDKDLIT 281
Query: 84 WNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKE 143
WNT+I +D EAL F + S+G V PN +TF S++ ACA + + G++
Sbjct: 282 WNTLISELERSDSS------EALLMFQRFESQGFV-PNCYTFTSLVAACANIAALNCGQQ 334
Query: 144 IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEG 203
+HG + + G + + +A+ L+ MYA CG + D+ +F V RN
Sbjct: 335 LHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR---------RN------ 379
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQ 263
+V W M MI GY +G+ EA+++F M
Sbjct: 380 -LVSWTSM------------------------------MI-GYGSHGYGAEAVELFDKMV 407
Query: 264 MGDVSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
+ P+ I ++VL A G +E G K+ ++ + I D + + V+D+ + G +
Sbjct: 408 SSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKI 467
Query: 323 EKAIQVFEKIENKKNAITWSAIIGGLAMH 351
+A ++ E++ K + TW AI+G H
Sbjct: 468 GEAYELVERMPFKPDESTWGAILGACKAH 496
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Query: 206 VLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMG 265
+L +I + G + +R LF++MP R VV+W MI+GYA + + A + FH+M
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 266 DVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCG-SVEK 324
SPN TL SVL + + L G VH K +E + +A+++MYA C ++E
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM--QQAGVTP 371
A +F I+ KN +TW+ +I G G L Y++M + A VTP
Sbjct: 166 ACLIFRDIK-VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP 213
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 283/562 (50%), Gaps = 40/562 (7%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRD 65
EPT T T S+ A +++ KQ HA I G+ D + +L F
Sbjct: 271 EPTRVTVSTCLSA----SANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL-- 324
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
++YA F +M + +WN II + + + +E + Q+ ++ + T
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQ------QGLVEDAIYMCQLMRLEKLKYDCVTL 378
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV- 184
+++ A A+ ++ GKE+ + ++ ++D +AS ++ MYA CG + DA +F + V
Sbjct: 379 ATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE 438
Query: 185 ---------------SHFDNNSTKLVRNKRMQEGV---VVLWNVMIDGFVRLGDIGASRK 226
S + +L ++ EGV V+ WN++I +R G + ++
Sbjct: 439 KDLILWNTLLAAYAESGLSGEALRLFYGMQL-EGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 227 LFNKMPQRSVV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAIS 282
+F +M ++ SW M++G QNG +EA+ MQ + PN ++ L A +
Sbjct: 498 MFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Query: 283 RLGALELGKWVHLYAEKNEIEIDDV-LGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITW 341
L +L +G+ +H Y +N V + ++++DMYAKCG + KA +VF + ++
Sbjct: 558 HLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS- 616
Query: 342 SAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+A+I A++G +A+ YR ++ G+ P ++ +LSAC+HAG I + +F +V
Sbjct: 617 NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS 676
Query: 402 VVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGE 461
++P +EHYG MVD + MP +PD + ++L+ +C ++ +
Sbjct: 677 KRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVD 736
Query: 462 RVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGV- 520
++R L++ P +SG+YV +SN +A G+W VV++R MK ++K PGCSWI+I G
Sbjct: 737 YLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEE 796
Query: 521 -IHEFLVEDESHPRAKEIRSML 541
+H F+ D++H R EI+ ML
Sbjct: 797 GVHVFVANDKTHTRINEIQMML 818
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 194/429 (45%), Gaps = 79/429 (18%)
Query: 33 KQIHAHFIKTG--LIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRA 90
KQIHA +K G + +++ F + D L+ A F+++ N FSW II
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDA--LEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 91 FAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVK 150
+ AL F +M E + P+ F P+V KAC + + G+ +HG+VVK
Sbjct: 148 KCRIGLCE-----GALMGFVEML-ENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVK 201
Query: 151 LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNV 210
GL++ FVAS+L
Sbjct: 202 SGLEDCVFVASSLA---------------------------------------------- 215
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPN 270
D + + G + + K+F+++P R+ V+WN ++ GY QNG +EA+ +F DM+ V P
Sbjct: 216 --DMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273
Query: 271 YITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFE 330
+T+ + L A + +G +E GK H A N +E+D++LG+++++ Y K G +E A VF+
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD 333
Query: 331 KIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIE 390
++ +K+ +TW+ II G G DA+ + M+ + V L+SA + ++
Sbjct: 334 RM-FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK 392
Query: 391 EGRSLFNHMVK------VVGIEPRVEHY---GCMVDXXXXXXXXXXXXXXVLNMPIRPDD 441
G+ + + ++ +V ++ Y G +VD V + + D
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVD-----------AKKVFDSTVEKDL 441
Query: 442 VIWKALLGA 450
++W LL A
Sbjct: 442 ILWNTLLAA 450
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 169/556 (30%), Positives = 263/556 (47%), Gaps = 63/556 (11%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
+L +++ K++ +Q+HA I G + + + + S+R D +A F ++
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLD--FATSSFNRIP 66
Query: 78 --NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKM 135
N SWNTI+ ++++ Y + L + C +G+ + F +KAC +
Sbjct: 67 CWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHC-DGV---DSFNLVFAIKACVGL 122
Query: 136 GRIQEGKEIHGFVVKLGLDNDEFVASNLV---------------------RMYAMCGVME 174
G ++ G IHG +K GLD D++VA +LV R + GV+
Sbjct: 123 GLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182
Query: 175 DAYLLFSN-----------------------------YVSHFDNNSTKLVRNKRMQEGVV 205
YL +S + F K V ++ +
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242
Query: 206 ----VLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHD 261
L +ID +V+ + +RKLF R+VV W +ISG+A+ EA D+F
Sbjct: 243 DQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQ 302
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
M + PN TL ++L + S LG+L GK VH Y +N IE+D V ++ IDMYA+CG+
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
++ A VF+ + ++N I+WS++I ++G +ALD + KM+ V P V ++ LLS
Sbjct: 363 IQMARTVFDMMP-ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLS 421
Query: 382 ACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDD 441
ACSH+G ++EG F M + G+ P EHY CMVD + NMP++P
Sbjct: 422 ACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMA 481
Query: 442 VIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKM 501
W ALL AC++H V + +A L+ + P S YV LSNI+A G W V VR KM
Sbjct: 482 SAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKM 541
Query: 502 KEMDVRKDPGCSWIEI 517
RK G S E+
Sbjct: 542 GIKGYRKHVGQSATEV 557
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 158/615 (25%), Positives = 304/615 (49%), Gaps = 69/615 (11%)
Query: 13 PTHPSSLFPQIARCKSIKQLKQIHAHFIKTG--LIGDPLAAAEILKFLSVSDRRDLKYAR 70
P ++FP ++ +SIK+ + +K G + D + + + + D++ +R
Sbjct: 214 PVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYA--ELGDIESSR 271
Query: 71 KFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLK 130
+ F N WNT+I + + D +E++ F + + + T+
Sbjct: 272 RVFDSCVERNIEVWNTMIGVYVQND-----CLVESIELFLEAIGSKEIVSDEVTYLLAAS 326
Query: 131 ACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY----VSH 186
A + + +++ G++ HGFV K + + ++L+ MY+ CG + ++ +F + V
Sbjct: 327 AVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVS 386
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNV------------------------------------ 210
++ + V+N EG+++++ +
Sbjct: 387 WNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLI 446
Query: 211 ------------MIDGFVRLGDIGASRKLF--NKMPQRSVVSWNVMISGYAQNGFFKEAM 256
+ID + + G I S+KLF + +R +WN MISGY QNG ++
Sbjct: 447 RQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTF 506
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
VF M ++ PN +T+ S+LPA S++G+++LGK +H ++ + ++ + + SA++DMY
Sbjct: 507 LVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMY 566
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
+K G+++ A +F + + ++N++T++ +I G HG A+ + MQ++G+ P + +
Sbjct: 567 SKAGAIKYAEDMFSQTK-ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITF 625
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
+ +LSACS++GLI+EG +F M +V I+P EHY C+ D V +
Sbjct: 626 VAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLG 685
Query: 437 IRPDDV-IWKALLGACKMHGNVKMGERVARTLMKL--FPHDSGSYVALSNIFASRGNWVG 493
+ +W +LLG+CK+HG +++ E V+ L K + SG V LSN++A W
Sbjct: 686 EEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKS 745
Query: 494 VVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGY 553
V +VR M+E ++K+ G S IEI G ++ F+ D+ HP + EI +++ ++ +R +
Sbjct: 746 VDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSF 805
Query: 554 RPNITQVL--LNMDE 566
+ V L +DE
Sbjct: 806 LTTLPTVTPSLELDE 820
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 170/404 (42%), Gaps = 73/404 (18%)
Query: 7 PTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKF----LSVSD 62
P T SS A K++K K +H H I+ + ++ L+ D
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 63 RRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNR 122
+ RK F M N +WNT+I + +T + EA FG M V+P+
Sbjct: 161 CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRN-----AEACRQFGIMMRME-VKPSP 214
Query: 123 FTFPSVLKACAKMGRIQEGKEIHGFVVKLGLD--NDEFVASNLVRMYAMCGVMEDAYLLF 180
+F +V A + I++ +G ++KLG + D FV S+ + MYA G +E + +F
Sbjct: 215 VSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVF 274
Query: 181 SNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWN 240
+ V +R++ WN
Sbjct: 275 DSCV------------------------------------------------ERNIEVWN 286
Query: 241 VMISGYAQNGFFKEAMDVFHD-MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEK 299
MI Y QN E++++F + + ++ + +T + A+S L +ELG+ H + K
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK 346
Query: 300 NEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALD 359
N E+ V+ ++++ MY++CGSV K+ VF + +++ ++W+ +I +G ++ L
Sbjct: 347 NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISAFVQNGLDDEGLM 405
Query: 360 YYRKMQQAGVTPTDVVYIGLLSACS-----------HAGLIEEG 392
+MQ+ G + LLSA S HA LI +G
Sbjct: 406 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 145/339 (42%), Gaps = 52/339 (15%)
Query: 67 KYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEG-LVEPNRFTF 125
+ AR+ F + P WNTII F + P EAL F+ +M + +T+
Sbjct: 56 QLARQLFDAIPKPTTVLWNTIIIGFICNNL-----PHEALLFYSRMKKTAPFTNCDAYTY 110
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVS 185
S LKACA+ ++ GK +H +++ ++ V ++L+ MY C D +
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCF-------- 162
Query: 186 HFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISG 245
+ RK+F+ M +++VV+WN +IS
Sbjct: 163 ----------------------------------EYDVVRKVFDNMRRKNVVAWNTLISW 188
Query: 246 YAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEK--NEIE 303
Y + G EA F M +V P+ ++ V+V PA+S +++ + K +E
Sbjct: 189 YVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYV 248
Query: 304 IDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALD-YYR 362
D + S+ I MYA+ G +E + +VF+ ++N W+ +IG + ++++ +
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCV-ERNIEVWNTMIGVYVQNDCLVESIELFLE 307
Query: 363 KMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+ + +V Y+ SA S +E GR + K
Sbjct: 308 AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK 346
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 9/192 (4%)
Query: 219 GDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPN--YITLVS 276
G+ +R+LF+ +P+ + V WN +I G+ N EA+ + M+ N T S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 277 VLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQ------VFE 330
L A + L+ GK VH + + V+ +++++MY C + + VF+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 331 KIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIE 390
+ +KN + W+ +I GR +A + M + V P+ V ++ + A S + I+
Sbjct: 173 NMR-RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 391 EGRSLFNHMVKV 402
+ + M+K+
Sbjct: 232 KANVFYGLMLKL 243
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/573 (29%), Positives = 274/573 (47%), Gaps = 68/573 (11%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+QIH +K GL DP +L S + A F+ + + WN ++ A+A
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM--VGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
E D AL FG M + ++ P+ FT +V+ C+ +G GK +H + K
Sbjct: 350 END-----YGYSALDLFGFMRQKSVL-PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 153 LDNDEFVASNLVRMYAMC-------------------------------GVMEDAYLLF- 180
+ + + S L+ +Y+ C G ++A +F
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463
Query: 181 ------------SNYVSHFDNNSTKL--------VRNKRMQEGVVV---LWNVMIDGFVR 217
S+ ++ N L V ++ G+V+ + + +ID + +
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSK 523
Query: 218 LGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSV 277
G + K+F M ++V+WN MIS Y++N + ++D+F+ M + P+ +++ SV
Sbjct: 524 CGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSV 583
Query: 278 LPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKN 337
L AIS +L GK +H Y + I D L +A+IDMY KCG + A +F+K+++K +
Sbjct: 584 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK-S 642
Query: 338 AITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFN 397
ITW+ +I G HG AL + +M++AG +P DV ++ L+SAC+H+G +EEG+++F
Sbjct: 643 LITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFE 702
Query: 398 HMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNV 457
M + GIEP +EHY MVD + MPI D IW LL A + H NV
Sbjct: 703 FMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNV 762
Query: 458 KMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEI 517
++G A L+++ P +YV L N++ G ++ MKE + K PGCSWIE+
Sbjct: 763 ELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEV 822
Query: 518 DGVIHEFLVEDESHPRAKEIRSMLEEISNRIRS 550
+ F S P EI ++L NR++S
Sbjct: 823 SDRTNVFFSGGSSSPMKAEIFNVL----NRLKS 851
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 143/322 (44%), Gaps = 48/322 (14%)
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
S N+ IRA + + L+AL + + + FTFPS+LKAC+ + + GK
Sbjct: 26 SINSGIRALIQKGE-----YLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGK 80
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQE 202
IHG VV LG D F+A++LV MY CG ++ A +F + + Q
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW--------------SQSQS 126
Query: 203 GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM 262
GV R V WN MI GY + FKE + F M
Sbjct: 127 GV---------------------------SARDVTVWNSMIDGYFKFRRFKEGVGCFRRM 159
Query: 263 QMGDVSPNYITLVSVLPAISRLGAL--ELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCG 320
+ V P+ +L V+ + + G E GK +H + +N ++ D L +A+IDMY K G
Sbjct: 160 LVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFG 219
Query: 321 SVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLL 380
A +VF +IE+K N + W+ +I G G +LD Y + V + G L
Sbjct: 220 LSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGAL 279
Query: 381 SACSHAGLIEEGRSLFNHMVKV 402
ACS + GR + +VK+
Sbjct: 280 GACSQSENSGFGRQIHCDVVKM 301
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 160/354 (45%), Gaps = 38/354 (10%)
Query: 26 CKSIKQLK---QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCF 82
C ++ L+ Q+H IKTGL+ + + ++ S ++ A K FT M+ N
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM--ALKVFTSMSTENMV 543
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
+WN++I ++ + P ++ F M S+G+ P+ + SVL A + + +GK
Sbjct: 544 AWNSMISCYSRNN-----LPELSIDLFNLMLSQGIF-PDSVSITSVLVAISSTASLLKGK 597
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQE 202
+HG+ ++LG+ +D + + L+ MY CG FS Y + K+MQ
Sbjct: 598 SLHGYTLRLGIPSDTHLKNALIDMYVKCG--------FSKYAENI---------FKKMQH 640
Query: 203 GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAMDV 258
++ WN+MI G+ GD + LF++M + V++ +IS +GF +E ++
Sbjct: 641 KSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNI 700
Query: 259 FHDM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYA 317
F M Q + PN +++ + R G LE + + + IE D + ++
Sbjct: 701 FEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEA---YSFIKAMPIEADSSIWLCLLSASR 757
Query: 318 KCGSVEKAIQVFEKI--ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV 369
+VE I EK+ + T+ +I G N+A M++ G+
Sbjct: 758 THHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 156/535 (29%), Positives = 256/535 (47%), Gaps = 83/535 (15%)
Query: 64 RDLKYARKFFTQMNNPNCFSWNTIIRAFA---------ETDDDDYKNPLEALGFFGQMCS 114
R++ AR+ F +M + SWN +I +A E D + + +E + S
Sbjct: 193 RNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIIS 252
Query: 115 EGLVEPNRFT-----------FPSVL---------KACAKMGRIQEGKEIHGFVVKLGLD 154
G ++ + FP+ L KAC+ +G I+ GKEIHG + D
Sbjct: 253 GGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYD 312
Query: 155 NDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDG 214
DN VRN +I
Sbjct: 313 G-------------------------------IDN-----VRN------------TLITM 324
Query: 215 FVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITL 274
+ + D+ + +F + + S+ +WN +ISGYAQ +EA + +M + PN ITL
Sbjct: 325 YSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITL 384
Query: 275 VSVLPAISRLGALELGKWVHLYAEKNEIEID-DVLGSAVIDMYAKCGSVEKAIQVFEKIE 333
S+LP +R+ L+ GK H Y + + D +L ++++D+YAK G + A QV +
Sbjct: 385 ASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQV-SDLM 443
Query: 334 NKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGR 393
+K++ +T++++I G G AL +++M ++G+ P V + +LSACSH+ L+ EG
Sbjct: 444 SKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGE 503
Query: 394 SLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKM 453
LF M GI P ++H+ CMVD + NMP +P W LL AC +
Sbjct: 504 RLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHI 563
Query: 454 HGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCS 513
HGN ++G+ A L+++ P + G YV ++N++A+ G+W + EVR M+++ V+KDPGC+
Sbjct: 564 HGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCA 623
Query: 514 WIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR-SAGYRPNITQVLLNMDEE 567
WI+ D F V D S P A +L+ ++ ++ +AGY N Q + DEE
Sbjct: 624 WIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYAINKVQ---SSDEE 675
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 178/374 (47%), Gaps = 34/374 (9%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
Q+HAH I +G+ + +++ F S + + A+ + + WN +I ++A
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHN--EAQSIIENSDILHPLPWNVLIASYA- 120
Query: 94 TDDDDYKNPL--EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
KN L E + + +M S+G + P+ FT+PSVLKAC + + G+ +HG +
Sbjct: 121 ------KNELFEEVIAAYKRMVSKG-IRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVS 173
Query: 152 GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVM 211
+ +V + L+ MY M A LF RM E V WN +
Sbjct: 174 SYKSSLYVCNALISMYKRFRNMGIARRLF-----------------DRMFERDAVSWNAV 216
Query: 212 IDGFVRLGDIGASRKLFNKM----PQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDV 267
I+ + G + +LF+KM + SV++WN++ G Q G + A+ + M+
Sbjct: 217 INCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPT 276
Query: 268 SPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQ 327
S + + ++ L A S +GA+ LGK +H A + + D + + +I MY+KC + A+
Sbjct: 277 SLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALI 336
Query: 328 VFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAG 387
VF + E + + TW++II G A ++ +A R+M AG P + +L C+
Sbjct: 337 VFRQTE-ENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIA 395
Query: 388 LIEEGRSLFNHMVK 401
++ G+ ++++
Sbjct: 396 NLQHGKEFHCYILR 409
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 140/438 (31%), Positives = 228/438 (52%), Gaps = 57/438 (13%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P F WN I+R++ +++PL+A+ + M V P+R++ P V+KA ++
Sbjct: 80 PIAFLWNNIMRSYIR-----HESPLDAIQVYLGMV-RSTVLPDRYSLPIVIKAAVQIHDF 133
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
GKE+H V+LG DEF S + +Y G F+N
Sbjct: 134 TLGKELHSVAVRLGFVGDEFCESGFITLYCKAG--------------EFEN--------- 170
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDV 258
+RK+F++ P+R + SWN +I G G EA+++
Sbjct: 171 -------------------------ARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEM 205
Query: 259 FHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVH--LYAEKNEIEIDDVLGSAVIDMY 316
F DM+ + P+ T+VSV + LG L L +H + K E + D ++ +++IDMY
Sbjct: 206 FVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMY 265
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
KCG ++ A +FE++ ++N ++WS++I G A +G +AL+ +R+M++ GV P + +
Sbjct: 266 GKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
+G+LSAC H GL+EEG++ F M +EP + HYGC+VD V MP
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 437 IRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVE 496
++P+ ++W L+G C+ G+V+M E VA +++L P + G YV L+N++A RG W V
Sbjct: 385 MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVER 444
Query: 497 VRLKMKEMDVRKDPGCSW 514
VR MK V K P S+
Sbjct: 445 VRKLMKTKKVAKIPAYSY 462
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Query: 219 GDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVL 278
GDI SR + ++ P + WN ++ Y ++ +A+ V+ M V P+ +L V+
Sbjct: 68 GDIFRSR-ILDQYPIAFL--WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI 124
Query: 279 PAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNA 338
A ++ LGK +H A + D+ S I +Y K G E A +VF++ +K
Sbjct: 125 KAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLG 184
Query: 339 ITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAG 387
+W+AIIGGL GRAN+A++ + M+++G+ P D + + ++C G
Sbjct: 185 -SWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLG 232
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/533 (28%), Positives = 261/533 (48%), Gaps = 54/533 (10%)
Query: 43 GLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPN---------------CFSWNTI 87
G D L+A ++ + + R ++ + F MN F+WN +
Sbjct: 116 GKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIM 175
Query: 88 IRAFAETDDDDYKNPLEA-LGFFGQMCSEGLVEPNRFTFPSVLKAC-AKMGRIQEGKEIH 145
I A + LE+ L F +M E +P+ +TF S++ AC A + G+ +H
Sbjct: 176 ISGHA------HCGKLESCLSLFKEML-ESEFKPDCYTFSSLMNACSADSSNVVYGRMVH 228
Query: 146 GFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVV 205
++K G + ++++ Y G +DA R E +
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAM---------------------RELESIE 267
Query: 206 VL----WNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHD 261
VL WN +ID +++G+ + ++F+ P++++V+W MI+GY +NG ++A+ F +
Sbjct: 268 VLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVE 327
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
M V ++ +VL A S L L GK +H + +G+A++++YAKCG
Sbjct: 328 MMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGD 387
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
+++A + F I NK + ++W+ ++ +HG A+ AL Y M +G+ P +V +IGLL+
Sbjct: 388 IKEADRAFGDIANK-DLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLT 446
Query: 382 ACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLN----MPI 437
CSH+GL+EEG +F MVK I V+H CM+D +
Sbjct: 447 TCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTD 506
Query: 438 RPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEV 497
++ W+ LLGAC H + ++G V++ L P + S+V LSN++ S G W +V
Sbjct: 507 SSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDV 566
Query: 498 RLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRS 550
R +M E ++K PGCSWIE+ + F+V D SHPR +E+ L + + +R+
Sbjct: 567 RREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMRN 619
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 164/370 (44%), Gaps = 54/370 (14%)
Query: 56 KFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSE 115
K S++ + AR+ F M + +WNT++ +++ EA+ F Q+
Sbjct: 10 KIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQ-----EAIALFTQL-RF 63
Query: 116 GLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMED 175
+P+ ++F ++L CA +G ++ G++I V++ G V ++L+ MY C
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 176 AYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS 235
A +F + N V W ++ ++ A+ +F +MP+R
Sbjct: 124 ANKVFRDMCCDSRNE---------------VTWCSLLFAYMNAEQFEAALDVFVEMPKRV 168
Query: 236 VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGA-LELGKWVH 294
+WN+MISG+A G + + +F +M + P+ T S++ A S + + G+ VH
Sbjct: 169 AFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVH 228
Query: 295 LYAEKN---------------------------EIEIDDVLG----SAVIDMYAKCGSVE 323
KN E+E +VL +++ID K G E
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETE 288
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC 383
KA++VF + +KN +TW+ +I G +G AL ++ +M ++GV Y +L AC
Sbjct: 289 KALEVFH-LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHAC 347
Query: 384 SHAGLIEEGR 393
S L+ G+
Sbjct: 348 SGLALLGHGK 357
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQ 263
V+V I + G I ++R++F+ MP+ V+WN M++ Y++ G +EA+ +F ++
Sbjct: 3 VLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLR 62
Query: 264 MGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
D P+ + ++L + LG ++ G+ + ++ + +++IDMY KC
Sbjct: 63 FSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 324 KAIQVFEKI-ENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIG--LL 380
A +VF + + +N +TW +++ + ALD + +M P V + ++
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEM------PKRVAFAWNIMI 176
Query: 381 SACSHAGLIEEGRSLFNHMVK 401
S +H G +E SLF M++
Sbjct: 177 SGHAHCGKLESCLSLFKEMLE 197
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/512 (29%), Positives = 239/512 (46%), Gaps = 52/512 (10%)
Query: 35 IHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAET 94
IH + K G+ D + +L + LK A K F+ M + N ++N +I F +
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDM--YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQM 331
Query: 95 DDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLD 154
D+ + EA F M GL EP+ TF VLKAC+ ++ G++IH + K
Sbjct: 332 DEITDEASSEAFKLFMDMQRRGL-EPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 155 NDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDG 214
+DEF+ S L+ +
Sbjct: 391 SDEFIGSALIEL------------------------------------------------ 402
Query: 215 FVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITL 274
+ +G + F ++ + SW MI + QN + A D+F + + P T+
Sbjct: 403 YALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTV 462
Query: 275 VSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN 334
++ A + AL G+ + YA K+ I+ + ++ I MYAK G++ A QVF +++N
Sbjct: 463 SLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQN 522
Query: 335 KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRS 394
A T+SA+I LA HG AN+AL+ + M+ G+ P ++G+L AC H GL+ +G
Sbjct: 523 PDVA-TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK 581
Query: 395 LFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMH 454
F M I P +H+ C+VD +L+ + V W+ALL +C+++
Sbjct: 582 YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVY 641
Query: 455 GNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSW 514
+ +G+RVA LM+L P SGSYV L NI+ G EVR M++ V+K+P SW
Sbjct: 642 KDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSW 701
Query: 515 IEIDGVIHEFLVEDESHPRAKEIRSMLEEISN 546
I I H F V D SHP ++ I +MLE + N
Sbjct: 702 IVIGNQTHSFAVADLSHPSSQMIYTMLETMDN 733
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 174/407 (42%), Gaps = 78/407 (19%)
Query: 4 ICEP-TTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSD 62
+C+P TA LF A+ S+ K H H IK+ L +L
Sbjct: 37 LCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKC- 95
Query: 63 RRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQM------CSEG 116
R+L +AR+ F +M N S+N++I + + +GF+ Q E
Sbjct: 96 -RELGFARQLFDRMPERNIISFNSLISGYTQ------------MGFYEQAMELFLEAREA 142
Query: 117 LVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDA 176
++ ++FT+ L C + + G+ +HG VV GL F
Sbjct: 143 NLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF------------------ 184
Query: 177 YLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV 236
L NV+ID + + G + + LF++ +R
Sbjct: 185 ------------------------------LINVLIDMYSKCGKLDQAMSLFDRCDERDQ 214
Query: 237 VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAIS---RLGALELGKWV 293
VSWN +ISGY + G +E +++ M ++ L SVL A G +E G +
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 294 HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGR 353
H Y K +E D V+ +A++DMYAK GS+++AI++F + + KN +T++A+I G
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPS-KNVVTYNAMISGFLQMDE 333
Query: 354 AND-----ALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSL 395
D A + MQ+ G+ P+ + +L ACS A +E GR +
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 115/195 (58%), Gaps = 5/195 (2%)
Query: 215 FVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITL 274
+ + ++G +R+LF++MP+R+++S+N +ISGY Q GF+++AM++F + + ++ + T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 275 VSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN 334
L L+LG+ +H N + L + +IDMY+KCG +++A+ +F++ +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD- 210
Query: 335 KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS---HAGLIEE 391
+++ ++W+++I G G A + L+ KM + G+ T +L AC + G IE+
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 392 GRSLFNHMVKVVGIE 406
G ++ + K +G+E
Sbjct: 271 GMAIHCYTAK-LGME 284
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 258/535 (48%), Gaps = 62/535 (11%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
DL + + F ++ N SW +I ++ + + +AL F +M G +EPN T
Sbjct: 252 DLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSE-----KALRSFSEMIKSG-IEPNLVT 305
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLD------------------------------ 154
SVL +C +G I+EGK +HGF V+ LD
Sbjct: 306 LYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVV 365
Query: 155 -NDEFVASN-LVRMYAMCGVMEDAYLLFSNYVSH------FDNNST-------KLVRNKR 199
+ VA N L+ +YA G++ A LF V+ F S+ LV +
Sbjct: 366 SDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGK 425
Query: 200 MQEGVVV--------LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
G V+ + N +ID + + G + ++ +FN++ RSVV+WN M+ G++QNG
Sbjct: 426 QIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
EA+ +F M + N +T ++V+ A S +G+LE GKWVH + ++ D +A
Sbjct: 486 SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTA 544
Query: 312 VIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
+IDMYAKCG + A VF + ++ S++I MHGR A+ + +M ++G P
Sbjct: 545 LIDMYAKCGDLNAAETVFRAMSSRSIVSW-SSMINAYGMHGRIGSAISTFNQMVESGTKP 603
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXX 431
+VV++ +LSAC H+G +EEG+ FN M K G+ P EH+ C +D
Sbjct: 604 NEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRT 662
Query: 432 VLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNW 491
+ MP D +W +L+ C++H + + + + L + D+G Y LSNI+A G W
Sbjct: 663 IKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEW 722
Query: 492 VGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISN 546
+R MK +++K PG S IEID + F +E+ + EI L + N
Sbjct: 723 EEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQN 777
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 205/439 (46%), Gaps = 67/439 (15%)
Query: 21 PQIARCKSIKQLKQIHAHFIKTG-LIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNP 79
P C S++ + Q+HAH + TG L DPL ++++ + D +R F P
Sbjct: 6 PLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPD--SSRLVFEAFPYP 63
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACA-KMGRI 138
+ F + +I+ D A+ + ++ SE + ++F FPSVL+ACA +
Sbjct: 64 DSFMYGVLIKCNVWCHLLD-----AAIDLYHRLVSE-TTQISKFVFPSVLRACAGSREHL 117
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF-----------SNYVSHF 187
G ++HG ++K G+D+D + ++L+ MY G + DA +F S VS
Sbjct: 118 SVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSC 177
Query: 188 DNNSTKLVRNKRMQEGVV------------------------------------------ 205
N ++V+ RM + +V
Sbjct: 178 LENG-EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 206 -VLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
L N ++ + + GD+ +S ++F K+ +++ VSW MIS Y + F ++A+ F +M
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK 296
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEID-DVLGSAVIDMYAKCGSVE 323
+ PN +TL SVL + +G + GK VH +A + E++ + + L A++++YA+CG +
Sbjct: 297 SGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLS 356
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC 383
V ++ + +N + W+++I A G AL +R+M + P +SAC
Sbjct: 357 DCETVL-RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISAC 415
Query: 384 SHAGLIEEGRSLFNHMVKV 402
+AGL+ G+ + H+++
Sbjct: 416 ENAGLVPLGKQIHGHVIRT 434
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 250/512 (48%), Gaps = 81/512 (15%)
Query: 27 KSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLS-VSDRRDLKYARKF-FTQMNNPNCFSW 84
K++ Q KQIHA + G + L I + S S K A F + +P+ F +
Sbjct: 19 KTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFLF 78
Query: 85 NTIIRAFAETDDDDYKNPLEALGFFGQMCSEG-LVEPNRFTFPSVL---KACAKMGRIQE 140
NT+++ P +++ F S+ L+ N TF VL A ++
Sbjct: 79 NTLLKC---------SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRV 129
Query: 141 GKEIHGFVVKLG-LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKR 199
G+ +HG V KLG L E + + L+ YA
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYA------------------------------- 158
Query: 200 MQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ-----NGFFKE 254
+ GD+ +RK+F++MP+R+ V+WN MI GY N ++
Sbjct: 159 -----------------KNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARK 201
Query: 255 AMDVFHDMQM--GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEI--EIDDVLGS 310
AM +F V P T+V VL AIS+ G LE+G VH Y EK E+D +G+
Sbjct: 202 AMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGT 261
Query: 311 AVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
A++DMY+KCG + A VFE + KN TW+++ GLA++GR N+ + +M ++G+
Sbjct: 262 ALVDMYSKCGCLNNAFSVFE-LMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIK 320
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXX 430
P ++ + LLSA H GL+EEG LF M G+ P +EHYGC+VD
Sbjct: 321 PNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQ 380
Query: 431 XVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHD---SGS----YVALSN 483
+L MPI+PD ++ ++L AC ++G MGE + + L+++ D SGS YVALSN
Sbjct: 381 FILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSN 440
Query: 484 IFASRGNWVGVVEVRLKMKEMDVRKDPGCSWI 515
+ A +G WV V ++R +MKE ++ PG S++
Sbjct: 441 VLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/503 (29%), Positives = 245/503 (48%), Gaps = 59/503 (11%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
S+ P K ++ + +H ++ +GD + L + + R + AR F +M
Sbjct: 223 SMLPVCGHLKDLEMGRNVHK-LVEEKRLGDKIEVKNALVNMYLKCGR-MDEARFVFDRME 280
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
+ +W +I + T+D D +N LE M EG V PN T S++ C +
Sbjct: 281 RRDVITWTCMINGY--TEDGDVENALELCRL---MQFEG-VRPNAVTIASLVSVCGDALK 334
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
+ +GK +HG+ V+ + +D + ++L+ MYA C ++ + +FS
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFS---------------- 378
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
GAS+ ++ P W+ +I+G QN +A+
Sbjct: 379 ------------------------GASK--YHTGP------WSAIIAGCVQNELVSDALG 406
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYA 317
+F M+ DV PN TL S+LPA + L L +H Y K + ++ +Y+
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYS 466
Query: 318 KCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
KCG++E A ++F I+ K K+ + W A+I G MHG ++AL + +M ++GVTP ++
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEI 526
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLN 434
+ L+ACSH+GL+EEG +LF M++ R HY C+VD +
Sbjct: 527 TFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITT 586
Query: 435 MPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGV 494
+P P +W ALL AC H NV++GE A L +L P ++G+YV L+NI+A+ G W +
Sbjct: 587 IPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDM 646
Query: 495 VEVRLKMKEMDVRKDPGCSWIEI 517
+VR M+ + +RK PG S IEI
Sbjct: 647 EKVRSMMENVGLRKKPGHSTIEI 669
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 184/387 (47%), Gaps = 62/387 (16%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRR--DLKYARKFFTQ 75
SL A +SI + K +H H I G + + IL LSV+ + YARK F +
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRV-----SGHILSTLSVTYALCGHITYARKLFEE 74
Query: 76 MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGL-VEPNRFTFPSVLKACAK 134
M + S+N +IR + + Y +A+ F +M SEG+ P+ +T+P V KA +
Sbjct: 75 MPQSSLLSYNIVIRMYVR--EGLYH---DAISVFIRMVSEGVKCVPDGYTYPFVAKAAGE 129
Query: 135 MGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKL 194
+ ++ G +HG +++ D++V + L+ M
Sbjct: 130 LKSMKLGLVVHGRILRSWFGRDKYVQNALLAM---------------------------- 161
Query: 195 VRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKE 254
++ G + +R +F+ M R V+SWN MISGY +NG+ +
Sbjct: 162 --------------------YMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMND 201
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
A+ +F M V ++ T+VS+LP L LE+G+ VH E+ + + +A+++
Sbjct: 202 ALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVN 261
Query: 315 MYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
MY KCG +++A VF+++E +++ ITW+ +I G G +AL+ R MQ GV P V
Sbjct: 262 MYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAV 320
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVK 401
L+S C A + +G+ L V+
Sbjct: 321 TIASLVSVCGDALKVNDGKCLHGWAVR 347
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 46/262 (17%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRD 65
EP AT +SL P A ++Q IH + KTG + AA ++ S
Sbjct: 417 EPNIAT----LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG--T 470
Query: 66 LKYARKFFTQMN----NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPN 121
L+ A K F + + + W +I + D AL F +M G V PN
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH-----NALQVFMEMVRSG-VTPN 524
Query: 122 RFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASN----LVRMYAMCGVMEDAY 177
TF S L AC+ G ++EG + F+++ SN +V + G +++AY
Sbjct: 525 EITFTSALNACSHSGLVEEGLTLFRFMLE---HYKTLARSNHYTCIVDLLGRAGRLDEAY 581
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGF-----VRLGDIGASRKLFNKMP 232
L + F+ ST +W ++ V+LG++ A+ KLF P
Sbjct: 582 NLITTI--PFEPTST--------------VWGALLAACVTHENVQLGEMAAN-KLFELEP 624
Query: 233 QRSVVSWNVMISGYAQNGFFKE 254
+ + ++ ++ + YA G +K+
Sbjct: 625 ENT-GNYVLLANIYAALGRWKD 645
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 233/435 (53%), Gaps = 56/435 (12%)
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLD-NDEFVASNLVRMYAMCGVMEDA 176
+ P+ TF ++ AC K GK+IH +VVK G+ +D V + ++R+Y +ED
Sbjct: 9 IAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIY-----VEDK 63
Query: 177 YLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV 236
LL +RK+F+++PQ V
Sbjct: 64 LLL-------------------------------------------DARKVFDEIPQPDV 80
Query: 237 VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLY 296
V W+V+++GY + G E ++VF +M + + P+ ++ + L A +++GAL GKW+H +
Sbjct: 81 VKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEF 140
Query: 297 AEKNE-IEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAN 355
+K IE D +G+A++DMYAKCG +E A++VF+K+ ++N +W+A+IGG A +G A
Sbjct: 141 VKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-TRRNVFSWAALIGGYAAYGYAK 199
Query: 356 DALDYYRKMQ-QAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGC 414
A+ +++ + G+ P VV +G+L+AC+H G +EEGRS+ +M I P+ EHY C
Sbjct: 200 KAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSC 259
Query: 415 MVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKL---- 470
+VD + MP++P +W ALL C+ H NV++GE + L+ L
Sbjct: 260 IVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGN 319
Query: 471 FPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDES 530
+ + V LSNI+ S +VR +++ VRK PG S +E+DG + +F+ D S
Sbjct: 320 VEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVS 379
Query: 531 HPRAKEIRSMLEEIS 545
HP +I +++ +S
Sbjct: 380 HPNLLQIHTVIHLLS 394
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 145/323 (44%), Gaps = 60/323 (18%)
Query: 33 KQIHAHFIKTGL-IGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAF 91
KQIH +K G+ + D +L+ + V D+ L ARK F ++ P+ W+ ++ +
Sbjct: 33 KQIHCWVVKNGVFLSDSHVQTGVLR-IYVEDKLLLD-ARKVFDEIPQPDVVKWDVLMNGY 90
Query: 92 AETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
E L F +M +GL EP+ F+ + L ACA++G + +GK IH FV K
Sbjct: 91 VRCGLGS-----EGLEVFREMLVKGL-EPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 144
Query: 152 G-LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNV 210
+++D FV + LV MYA CG +E A +F
Sbjct: 145 SWIESDVFVGTALVDMYAKCGCIETAVEVF------------------------------ 174
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD-VSP 269
K+ +R+V SW +I GYA G+ K+AM ++ D + P
Sbjct: 175 ------------------KKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKP 216
Query: 270 NYITLVSVLPAISRLGALELGKWVHLYAE-KNEIEIDDVLGSAVIDMYAKCGSVEKAIQV 328
+ + L+ VL A + G LE G+ + E + EI S ++D+ + G ++ A+ +
Sbjct: 217 DSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNL 276
Query: 329 FEKIENKKNAITWSAIIGGLAMH 351
EK+ K A W A++ G H
Sbjct: 277 IEKMPMKPLASVWGALLNGCRTH 299
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 10/246 (4%)
Query: 266 DVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV-LGSAVIDMYAKCGSVEK 324
D++P+Y+T ++ A + +GK +H + KN + + D + + V+ +Y + +
Sbjct: 8 DIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLD 67
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS 384
A +VF++I + + + W ++ G G ++ L+ +R+M G+ P + L+AC+
Sbjct: 68 ARKVFDEIP-QPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 126
Query: 385 HAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIW 444
G + +G+ + + K IE V +VD V R + W
Sbjct: 127 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVD-MYAKCGCIETAVEVFKKLTRRNVFSW 185
Query: 445 KALLGACKMHGNVKMGERVARTLMKLFPHDSG---SYVALSNIFASRGNWVGVVEVRLKM 501
AL+G +G K A T ++ + G V L + A+ + + E R +
Sbjct: 186 AALIGGYAAYGYAKK----AMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSML 241
Query: 502 KEMDVR 507
+ M+ R
Sbjct: 242 ENMEAR 247
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 151/507 (29%), Positives = 256/507 (50%), Gaps = 19/507 (3%)
Query: 15 HPSSLFPQIARCKSIKQLKQ---IHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARK 71
+P +L C ++ LK+ +H +K GL + + F S S Y
Sbjct: 229 NPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS- 287
Query: 72 FFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKA 131
F ++ + + FSW +II + A + D + E+ F +M ++G+ P+ ++
Sbjct: 288 -FRELGDEDMFSWTSIIASLARSGDME-----ESFDMFWEMQNKGM-HPDGVVISCLINE 340
Query: 132 CAKMGRIQEGKEIHGFVVKLGLD-NDEF----VASNLVRMYAMCGVMEDAYLLFSNYVSH 186
KM + +GK HG V L +F VA L + G E + Y +
Sbjct: 341 LGKMMLVPQGKAFHGTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGAV 400
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGY 246
S K + + + N +ID + ++GD+ + ++F + +V++WN MI+ Y
Sbjct: 401 LLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASY 459
Query: 247 AQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD 306
++A+ +F M + P+ ITLV++L A G+LE G+ +H Y + E E++
Sbjct: 460 VHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNL 519
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQ 366
L +A+IDMYAKCG +EK+ ++F+ N+K+A+ W+ +I G MHG A+ + +M++
Sbjct: 520 SLSAALIDMYAKCGHLEKSRELFDA-GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEE 578
Query: 367 AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXX 426
+ V PT ++ LLSAC+HAGL+E+G+ LF M + ++P ++HY C+VD
Sbjct: 579 SDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQY-DVKPNLKHYSCLVDLLSRSGNLE 637
Query: 427 XXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFA 486
V++MP PD VIW LL +C HG +MG R+A + P + G Y+ L+N+++
Sbjct: 638 EAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYS 697
Query: 487 SRGNWVGVVEVRLKMKEMDVRKDPGCS 513
+ G W R M+E V K G S
Sbjct: 698 AAGKWEEAERAREMMRESGVGKRAGHS 724
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 169/372 (45%), Gaps = 61/372 (16%)
Query: 28 SIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTI 87
S++ L++ +A I GL + A++++ + + +L + + F + + F WN+I
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNL--SSRVFHLVTRRDIFLWNSI 96
Query: 88 IRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGF 147
I+A + DY +L FF M G P+ FT P V+ ACA++ G +HG
Sbjct: 97 IKA--HFSNGDYA---RSLCFFFSMLLSG-QSPDHFTAPMVVSACAELLWFHVGTFVHGL 150
Query: 148 VVKLG-LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVV 206
V+K G D + V ++ V Y+ CG ++DA L+
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGFLQDACLV--------------------------- 183
Query: 207 LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMG- 265
F++MP R VV+W +ISG+ QNG + + M
Sbjct: 184 ---------------------FDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAG 222
Query: 266 -DVS-PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
DV PN TL A S LGAL+ G+ +H +A KN + + S++ Y+K G+
Sbjct: 223 SDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPS 282
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC 383
+A F ++ + ++ +W++II LA G ++ D + +MQ G+ P VV L++
Sbjct: 283 EAYLSFRELGD-EDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINEL 341
Query: 384 SHAGLIEEGRSL 395
L+ +G++
Sbjct: 342 GKMMLVPQGKAF 353
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 5/195 (2%)
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPN 270
+I + G S ++F+ + +R + WN +I + NG + ++ F M + SP+
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPD 124
Query: 271 YITLVSVLPAISRLGALELGKWVH-LYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF 329
+ T V+ A + L +G +VH L + + + +G++ + Y+KCG ++ A VF
Sbjct: 125 HFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVF 184
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV---TPTDVVYIGLLSACSHA 386
+++ + ++ + W+AII G +G + L Y KM AG P ACS+
Sbjct: 185 DEMPD-RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNL 243
Query: 387 GLIEEGRSLFNHMVK 401
G ++EGR L VK
Sbjct: 244 GALKEGRCLHGFAVK 258
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 153/503 (30%), Positives = 242/503 (48%), Gaps = 65/503 (12%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
A F +M PN SWN +I F + K AL F +M EGLV + F P
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVD------KGSPRALEFLVRMQREGLV-LDGFALPCG 244
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDA------------ 176
LKAC+ G + GK++H VVK GL++ F S L+ MY+ CG + A
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 177 -----------------------YLLFSNYVSH--FDN-----------NSTKLVRNKRM 200
+LL Y S FD+ N L ++
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV 364
Query: 201 QEGVVV--------LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFF 252
VVV + ++++D +G+I + KLF+++P + +++++ +I G ++GF
Sbjct: 365 HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFN 424
Query: 253 KEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAV 312
A +F ++ + + + ++L S L +L GK +H K E + V +A+
Sbjct: 425 SLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATAL 484
Query: 313 IDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPT 372
+DMY KCG ++ + +F+ + +++ ++W+ II G +GR +A Y+ KM G+ P
Sbjct: 485 VDMYVKCGEIDNGVVLFDGML-ERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPN 543
Query: 373 DVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXV 432
V ++GLLSAC H+GL+EE RS M G+EP +EHY C+VD +
Sbjct: 544 KVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELI 603
Query: 433 LNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWV 492
MP+ PD IW +LL AC H N + +A L+K FP D Y +LSN +A+ G W
Sbjct: 604 NKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWD 663
Query: 493 GVVEVRLKMKEMDVRKDPGCSWI 515
+ +VR K++ K+ G SWI
Sbjct: 664 QLSKVREAAKKLGA-KESGMSWI 685
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 166/362 (45%), Gaps = 27/362 (7%)
Query: 24 ARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFS 83
+ ++ K+ + I AH IK G+ + A ++ D R L A K F +M+ N +
Sbjct: 16 GKVQAFKRGESIQAHVIKQGISQNVFIANNVISM--YVDFRLLSDAHKVFDEMSERNIVT 73
Query: 84 WNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKE 143
W T++ + T D P +A+ + +M N F + +VLKAC +G IQ G
Sbjct: 74 WTTMVSGY--TSDG---KPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGIL 128
Query: 144 IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEG 203
++ + K L D + +++V MY G + +A N+S K +
Sbjct: 129 VYERIGKENLRGDVVLMNSVVDMYVKNGRLIEA------------NSSFKEILRPSSTS- 175
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQ 263
WN +I G+ + G + + LF++MPQ +VVSWN +ISG+ G A++ MQ
Sbjct: 176 ----WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQ 230
Query: 264 MGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
+ + L L A S G L +GK +H K+ +E SA+IDMY+ CGS+
Sbjct: 231 REGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLI 290
Query: 324 KAIQVF--EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
A VF EK+ + W++++ G ++ AL ++ Q+ + G L
Sbjct: 291 YAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALK 350
Query: 382 AC 383
C
Sbjct: 351 IC 352
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 152/362 (41%), Gaps = 64/362 (17%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
Q+H+ + +G D + + ++ + + +++ A K F ++ N + +++ +IR
Sbjct: 363 QVHSLVVVSGYELDYIVGSILVDLHA--NVGNIQDAHKLFHRLPNKDIIAFSGLIRGCV- 419
Query: 94 TDDDDYKNPLEALGF--FGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
K+ +L F F ++ GL + ++F ++LK C+ + + GK+IHG +K
Sbjct: 420 ------KSGFNSLAFYLFRELIKLGL-DADQFIVSNILKVCSSLASLGWGKQIHGLCIKK 472
Query: 152 GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVM 211
G +++ A+ LV MY CG +++ +LF M E VV W +
Sbjct: 473 GYESEPVTATALVDMYVKCGEIDNGVVLFDG-----------------MLERDVVSWTGI 515
Query: 212 IDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNY 271
I GF QNG +EA FH M + PN
Sbjct: 516 IVGF-------------------------------GQNGRVEEAFRYFHKMINIGIEPNK 544
Query: 272 ITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGS--AVIDMYAKCGSVEKAIQVF 329
+T + +L A G LE + L K+E ++ L V+D+ + G ++A ++
Sbjct: 545 VTFLGLLSACRHSGLLEEARST-LETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELI 603
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLI 389
K+ + + W++++ H A K+ + G VY L +A + G+
Sbjct: 604 NKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLK-GFPDDPSVYTSLSNAYATLGMW 662
Query: 390 EE 391
++
Sbjct: 663 DQ 664
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 169/588 (28%), Positives = 279/588 (47%), Gaps = 77/588 (13%)
Query: 14 THPSSLFPQIAR-CKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYA 69
T + P I R C+ + + + H I+ GL + E+L + R Y
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY- 213
Query: 70 RKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVL 129
F +M N SWN +I+ F++ D + A+ F M E +P+ T+ SVL
Sbjct: 214 -NLFVEMPVRNRMSWNVMIKGFSQEYDCE-----SAVKIFEWMQREEF-KPDEVTWTSVL 266
Query: 130 KA-----------------------------------CAKMGRIQEGKEIHGFVVKLGLD 154
CA++ + +++HG+V+K G +
Sbjct: 267 SCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFE 326
Query: 155 NDEFVASN--LVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
E++ S L+ +Y G ++DA LF + +RNK ++ WN +I
Sbjct: 327 --EYLPSRNALIHVYGKQGKVKDAEHLF------------RQIRNKGIES-----WNSLI 367
Query: 213 DGFVRLGDIGASRKLFNKMPQ--------RSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
FV G + + LF+++ + +VV+W +I G G ++++ F MQ
Sbjct: 368 TSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQF 427
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEK 324
V N +T+ +L + L AL LG+ +H + + + + ++ +A+++MYAKCG + +
Sbjct: 428 SKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSE 487
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS 384
VFE I +K + I+W++II G MHG A AL + +M +G P + + +LSACS
Sbjct: 488 GSLVFEAIRDK-DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACS 546
Query: 385 HAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIW 444
HAGL+E+GR +F M K G+EP+ EHY C+VD V NMP+ P +
Sbjct: 547 HAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVL 606
Query: 445 KALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEM 504
ALL +C+MH NV + E +A L L P +GSY+ LSNI+++ G W VR K+
Sbjct: 607 GALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKK 666
Query: 505 DVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAG 552
D++K G SWIE+ ++F + I +LE++ + + G
Sbjct: 667 DLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG 714
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 184/424 (43%), Gaps = 67/424 (15%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLI--GDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPN 80
+ C + +Q +Q+HA + + I LAA I + + D + + + + +
Sbjct: 63 LGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSD 122
Query: 81 CFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQE 140
WN+I++A Y+N LE + M GL + + P +L+AC +GR
Sbjct: 123 LRLWNSILKA--NVSHGLYENALE---LYRGMRQRGLT-GDGYILPLILRACRYLGRFGL 176
Query: 141 GKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRM 200
+ H V+++GL + V + L+ +Y G M DAY LF VRN RM
Sbjct: 177 CRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMP----------VRN-RM 225
Query: 201 QEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAM 256
WNVMI GF + D ++ K+F M + V+W ++S ++Q G F++ +
Sbjct: 226 S------WNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVL 279
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
FH M+M + + L + L AL + + VH Y K E +A+I +Y
Sbjct: 280 KYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVY 339
Query: 317 AKCGSVEKAIQVFEKIEN--------------------------------------KKNA 338
K G V+ A +F +I N K N
Sbjct: 340 GKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANV 399
Query: 339 ITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNH 398
+TW+++I G + GR +D+L+Y+R+MQ + V V +LS C+ + GR + H
Sbjct: 400 VTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGH 459
Query: 399 MVKV 402
+++
Sbjct: 460 VIRT 463
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 219/396 (55%), Gaps = 22/396 (5%)
Query: 121 NRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF 180
N ++ S++KA K+G + + + D D + ++ Y MEDA+ LF
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSAR----LLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALF 335
Query: 181 SNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWN 240
S + + D +S WN+M+ G+ +G++ +R F K P++ VSWN
Sbjct: 336 SE-MPNRDAHS----------------WNMMVSGYASVGNVELARHYFEKTPEKHTVSWN 378
Query: 241 VMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKN 300
+I+ Y +N +KEA+D+F M + P+ TL S+L A + L L LG +H K
Sbjct: 379 SIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT 438
Query: 301 EIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDY 360
I D + +A+I MY++CG + ++ ++F++++ K+ ITW+A+IGG A HG A++AL+
Sbjct: 439 VIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNL 497
Query: 361 YRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXX 420
+ M+ G+ P+ + ++ +L+AC+HAGL++E ++ F M+ V IEP++EHY +V+
Sbjct: 498 FGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTS 557
Query: 421 XXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVA 480
+ +MP PD +W ALL AC+++ NV + A + +L P S YV
Sbjct: 558 GQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVL 617
Query: 481 LSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIE 516
L N++A G W +VR+ M+ ++K+ G SW++
Sbjct: 618 LYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 178/430 (41%), Gaps = 59/430 (13%)
Query: 63 RRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNR 122
RR++ ARK F M + +WNT+I + + EA F +M S +
Sbjct: 84 RREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLE--EARKLFDEMPSR-----DS 136
Query: 123 FTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSN 182
F++ +++ AK RI E + + + + S ++ + G ++ A +LF
Sbjct: 137 FSWNTMISGYAKNRRIGEAL----LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 183 Y----VSHFDNNSTKLVRNKRMQEGVVVL----------------WNVMIDGFVRLGDIG 222
S L++N+R+ E VL +N +I G+ + G +
Sbjct: 193 MPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVE 252
Query: 223 ASRKLFNKMPQ---------------RSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDV 267
A+R LF+++P ++VVSWN MI Y + G A +F M+ D
Sbjct: 253 AARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRD- 311
Query: 268 SPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG-SAVIDMYAKCGSVEKAI 326
+ ++ T++ +SR+ +A +E+ D + ++ YA G+VE A
Sbjct: 312 TISWNTMIDGYVHVSRME--------DAFALFSEMPNRDAHSWNMMVSGYASVGNVELAR 363
Query: 327 QVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
FEK +K+ ++W++II + +A+D + +M G P LLSA +
Sbjct: 364 HYFEKTP-EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST-- 420
Query: 387 GLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKA 446
GL+ + H + V + P V + ++ M ++ + + W A
Sbjct: 421 GLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNA 480
Query: 447 LLGACKMHGN 456
++G HGN
Sbjct: 481 MIGGYAFHGN 490
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 146/350 (41%), Gaps = 62/350 (17%)
Query: 208 WNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDV 267
WN MI G+ + IG + LF KMP+R+ VSW+ MI+G+ QNG A+ +F M + D
Sbjct: 139 WNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDS 198
Query: 268 SPNYITLVSVLPAISRL--GALELGKWVHL-----------------YAEKNEIE----- 303
SP LV+ L RL A LG++ L Y ++ ++E
Sbjct: 199 SP-LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCL 257
Query: 304 ---IDDVLG------------------SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWS 342
I D+ G +++I Y K G V A +F+++++ ++ I+W+
Sbjct: 258 FDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD-RDTISWN 316
Query: 343 AIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV 402
+I G R DA + +M ++ ++S + G +E R F
Sbjct: 317 TMIDGYVHVSRMEDAFALFSEMPNRDAHSWNM----MVSGYASVGNVELARHYFEKTP-- 370
Query: 403 VGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPI---RPDDVIWKALLGACKMHGNVKM 459
E + ++ + M I +PD +LL A N+++
Sbjct: 371 ---EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRL 427
Query: 460 GERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKD 509
G ++ + ++K D + AL +++ G ++E R EM ++++
Sbjct: 428 GMQMHQIVVKTVIPDVPVHNALITMYSRCGE---IMESRRIFDEMKLKRE 474
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
N ++ +R G I +R +F K+ R+ V+WN MISGY + +A +F M DV
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQV 328
+ T++S + + LE + L+ E D + +I YAK + +A+ +
Sbjct: 104 -TWNTMISGYVSCGGIRFLEEAR--KLFDEMP--SRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 329 FEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS------- 381
FEK+ ++NA++WSA+I G +G + A+ +RKM +P + GL+
Sbjct: 159 FEKMP-ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEA 217
Query: 382 --ACSHAGLIEEGRS----LFNHMVKVVGIEPRVEHYGCMVD 417
G + GR +N ++ G +VE C+ D
Sbjct: 218 AWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFD 259
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 257/549 (46%), Gaps = 69/549 (12%)
Query: 26 CKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCF 82
C ++ L K+IH +K D + +L + ++K A K F + N
Sbjct: 152 CTELQDLDNGKKIHCQLVKVPSF-DNVVLTGLLDMYAKCG--EIKSAHKVFNDITLRNVV 208
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
W ++I + + D + E L F +M E V N +T+ +++ AC K+ + +GK
Sbjct: 209 CWTSMIAGYVKNDLCE-----EGLVLFNRM-RENNVLGNEYTYGTLIMACTKLSALHQGK 262
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD-------------N 189
HG +VK G++ + ++L+ MY CG + +A +F+ + SH D N
Sbjct: 263 WFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH-SHVDLVMWTAMIVGYTHN 321
Query: 190 NSTK-----------------------------LVRNKRMQEGV------VVLW-----N 209
S L+ N + V V +W N
Sbjct: 322 GSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVAN 381
Query: 210 VMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSP 269
++ + + ++ +F ++ +V+WN +ISG++QNG EA+ +FH M V+P
Sbjct: 382 ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP 441
Query: 270 NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVL--GSAVIDMYAKCGSVEKAIQ 327
N +T+ S+ A + LG+L +G +H Y+ K + G+A++D YAKCG + A
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 328 VFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAG 387
+F+ IE +KN ITWSA+IGG G +L+ + +M + P + + +LSAC H G
Sbjct: 502 IFDTIE-EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTG 560
Query: 388 LIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKAL 447
++ EG+ F+ M K P +HY CMVD + MPI+PD + A
Sbjct: 561 MVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAF 620
Query: 448 LGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVR 507
L C MH +GE V + ++ L P D+ YV +SN++AS G W EVR MK+ +
Sbjct: 621 LHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLS 680
Query: 508 KDPGCSWIE 516
K G S +E
Sbjct: 681 KIAGHSTME 689
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 175/386 (45%), Gaps = 58/386 (15%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
S F +++C +I L+Q H GL+GD A +++ K AR F Q+
Sbjct: 45 SPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYT--KDARLVFDQI 102
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
P+ + W ++R + K +E + + + G + F LKAC ++
Sbjct: 103 PEPDFYLWKVMLRCYCLN-----KESVEVVKLYDLLMKHGF-RYDDIVFSKALKACTELQ 156
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVR 196
+ GK+IH +VK V FDN
Sbjct: 157 DLDNGKKIHCQLVK---------------------------------VPSFDN------- 176
Query: 197 NKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAM 256
V+ ++D + + G+I ++ K+FN + R+VV W MI+GY +N +E +
Sbjct: 177 ---------VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGL 227
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
+F+ M+ +V N T +++ A ++L AL GKW H K+ IE+ L ++++DMY
Sbjct: 228 VLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMY 287
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
KCG + A +VF + + + + W+A+I G +G N+AL ++KM+ + P V
Sbjct: 288 VKCGDISNARRVFNE-HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKV 402
+LS C +E GRS+ +KV
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKV 372
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 150/366 (40%), Gaps = 67/366 (18%)
Query: 23 IARCKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNP 79
++ C I+ L + +H IK G+ +A A + + RD KY F +
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYV---FEMESEK 406
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
+ +WN+II F++ EAL F +M SE V PN T S+ ACA +G +
Sbjct: 407 DIVAWNSIISGFSQNGSIH-----EALFLFHRMNSES-VTPNGVTVASLFSACASLGSLA 460
Query: 140 EGKEIHGFVVKLGL--DNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
G +H + VKLG + V + L+ YA CG + A L+F
Sbjct: 461 VGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT--------------- 505
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
++E + W+ MI G+ + GD S +LF +M ++
Sbjct: 506 --IEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK----------------------- 540
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGALELGK--WVHLYAEKNEIEIDDVLGSAVIDM 315
PN T S+L A G + GK + +Y + N + ++DM
Sbjct: 541 --------QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHY-TCMVDM 591
Query: 316 YAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVV 375
A+ G +E+A+ + EK+ + + + A + G MH R + +KM + P D
Sbjct: 592 LARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD--LHPDDAS 649
Query: 376 YIGLLS 381
Y L+S
Sbjct: 650 YYVLVS 655
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/521 (28%), Positives = 254/521 (48%), Gaps = 59/521 (11%)
Query: 32 LKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN-NPNCFSWNTIIRA 90
LKQ+HA +K GL + ++ S +D + A++ F + + + SWN++I
Sbjct: 167 LKQVHAKVLKLGLQHEITICNAMIS--SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAG 224
Query: 91 FAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVK 150
F++ + + A F QM VE + +T+ +L AC+ GK +HG V+K
Sbjct: 225 FSKHELKE-----SAFELFIQM-QRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK 278
Query: 151 LGLDNDEFVASNLVRMYAM--CGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLW 208
GL+ + L+ MY G MEDA LF + ++ ++ W
Sbjct: 279 KGLEQVTSATNALISMYIQFPTGTMEDALSLF-----------------ESLKSKDLISW 321
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
N +I GF AQ G ++A+ F ++ ++
Sbjct: 322 NSIITGF-------------------------------AQKGLSEDAVKFFSYLRSSEIK 350
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQV 328
+ ++L + S L L+LG+ +H A K+ ++ + S++I MY+KCG +E A +
Sbjct: 351 VDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKC 410
Query: 329 FEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGL 388
F++I +K + + W+A+I G A HG +LD + +M V V + +L+ACSH GL
Sbjct: 411 FQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGL 470
Query: 389 IEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALL 448
I+EG L N M V I+PR+EHY VD + +MP+ PD ++ K L
Sbjct: 471 IQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFL 530
Query: 449 GACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRK 508
G C+ G ++M +VA L+++ P D +YV+LS++++ W V+ MKE V+K
Sbjct: 531 GVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKK 590
Query: 509 DPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR 549
PG SWIEI + F ED S+P ++I M+++++ ++
Sbjct: 591 VPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 631
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 174/381 (45%), Gaps = 64/381 (16%)
Query: 72 FFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKA 131
F +M + SWNT+I + + +A F M G + + ++F +LK
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLE-----DAWCLFTCMKRSG-SDVDGYSFSRLLKG 55
Query: 132 CAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY-------------- 177
A + R G+++HG V+K G + + +V S+LV MYA C +EDA+
Sbjct: 56 IASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSW 115
Query: 178 ------------------LL---------------FSNYVSHFDN----NSTKLVRNKRM 200
LL F+ ++ D+ N K V K +
Sbjct: 116 NALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVL 175
Query: 201 QEGV---VVLWNVMIDGFVRLGDIGASRKLFNKM-PQRSVVSWNVMISGYAQNGFFKEAM 256
+ G+ + + N MI + G + ++++F+ + + ++SWN MI+G++++ + A
Sbjct: 176 KLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAF 235
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
++F MQ V + T +L A S GK +H K +E +A+I MY
Sbjct: 236 ELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMY 295
Query: 317 AK--CGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
+ G++E A+ +FE +++ K+ I+W++II G A G + DA+ ++ ++ + + D
Sbjct: 296 IQFPTGTMEDALSLFESLKS-KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDY 354
Query: 375 VYIGLLSACSHAGLIEEGRSL 395
+ LL +CS ++ G+ +
Sbjct: 355 AFSALLRSCSDLATLQLGQQI 375
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/497 (29%), Positives = 251/497 (50%), Gaps = 35/497 (7%)
Query: 30 KQLKQIHAHFIKTGLIGDPLAAAEILKF-LSVSDRRDLKYARKFFTQMNNPNCFSWNTII 88
K K+IHA IKTG D + ++L L L YAR+ F ++ P ++N +I
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGC---LSYARQVFDELPKPTLSAYNYMI 107
Query: 89 RAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI-----QEGKE 143
+ + ++ L Q S + + +T VLKA G +
Sbjct: 108 SGYLK------HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRL 161
Query: 144 IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEG 203
+H ++K ++ D+ + + LV Y G +E A +F + M++
Sbjct: 162 VHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF-----------------ETMKDE 204
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNG-FFKEAMDVFHDM 262
VV MI G++ G + + ++FN + +V +N M+ G++++G K ++D++ M
Sbjct: 205 NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISM 264
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
Q PN T SV+ A S L + E+G+ VH K+ + +GS+++DMYAKCG +
Sbjct: 265 QRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGI 324
Query: 323 EKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
A +VF++++ +KN +W+++I G +G +AL+ + +M++ + P V ++G LSA
Sbjct: 325 NDARRVFDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSA 383
Query: 383 CSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV 442
CSH+GL+++G +F M + ++P++EHY C+VD MP RPD
Sbjct: 384 CSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSD 443
Query: 443 IWKALLGACKMHGNVKMGERVARTLMKLFPHD-SGSYVALSNIFASRGNWVGVVEVRLKM 501
IW ALL +C +HGNV++ A L KL G+Y+ALSN++AS W V ++R M
Sbjct: 444 IWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVM 503
Query: 502 KEMDVRKDPGCSWIEID 518
K + K G SW D
Sbjct: 504 KRRRISKTIGRSWTSED 520
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/435 (33%), Positives = 226/435 (51%), Gaps = 29/435 (6%)
Query: 84 WNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKE 143
+NT+IR++ T + YK +L F M + V+PN TFPS++KA + G
Sbjct: 54 YNTLIRSYLTTGE--YKT---SLALFTHMLASH-VQPNNLTFPSLIKAACSSFSVSYGVA 107
Query: 144 IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEG 203
+HG +K G D FV ++ VR Y G +E + +F + ++
Sbjct: 108 LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNP----------------- 150
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQ 263
VV N ++D R G++ + + F +MP VVSW +I+G+++ G +A+ VF +M
Sbjct: 151 CVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMI 210
Query: 264 MGD---VSPNYITLVSVLPAISRL--GALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAK 318
+ ++PN T VSVL + + G + LGK +H Y EI + LG+A++DMY K
Sbjct: 211 QNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGK 270
Query: 319 CGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIG 378
G +E A+ +F++I +KK W+AII LA +GR AL+ + M+ + V P + +
Sbjct: 271 AGDLEMALTIFDQIRDKK-VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLA 329
Query: 379 LLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIR 438
+L+AC+ + L++ G LF+ + I P EHYGC+VD + ++P
Sbjct: 330 ILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFE 389
Query: 439 PDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVR 498
PD + ALLGACK+H N ++G V + L+ L P G YVALS A NW ++R
Sbjct: 390 PDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMR 449
Query: 499 LKMKEMDVRKDPGCS 513
M E +RK P S
Sbjct: 450 KAMIEAGIRKIPAYS 464
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 162/394 (41%), Gaps = 90/394 (22%)
Query: 15 HPSSL-FPQI--ARCKS--IKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYA 69
P++L FP + A C S + +H +K G + DP ++F + DL+ +
Sbjct: 83 QPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYG--EVGDLESS 140
Query: 70 RKFFTQMNNPNCFSWNTIIRAFAETDDDDY------KNPL-------------------- 103
RK F + NP + N+++ A + DY + P+
Sbjct: 141 RKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHA 200
Query: 104 EALGFFGQMCS--EGLVEPNRFTFPSVLKACAKM--GRIQEGKEIHGFVVKLGLDNDEFV 159
+AL FG+M ++ PN TF SVL +CA G I+ GK+IHG+V+ + +
Sbjct: 201 KALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTL 260
Query: 160 ASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLG 219
+ L+ MY G +E A +F +R+K+
Sbjct: 261 GTALLDMYGKAGDLEMALTIFDQ------------IRDKK-------------------- 288
Query: 220 DIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
V +WN +IS A NG K+A+++F M+ V PN ITL+++L
Sbjct: 289 ----------------VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILT 332
Query: 280 AISRLGALELG--KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKN 337
A +R ++LG + + +E I + G V+D+ + G + A + + + +
Sbjct: 333 ACARSKLVDLGIQLFSSICSEYKIIPTSEHYG-CVVDLIGRAGLLVDAANFIQSLPFEPD 391
Query: 338 AITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
A A++G +H N L Q G+ P
Sbjct: 392 ASVLGALLGACKIH--ENTELGNTVGKQLIGLQP 423
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 246/506 (48%), Gaps = 31/506 (6%)
Query: 20 FPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNP 79
F + SI L Q+HA I +G D A +LK S S D Y + +
Sbjct: 26 FKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLK--SSSRFGDSSYTVSIYRSIGKL 83
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
C N + +A+ + +P +ALGF+ + G V P+ +TF S++ K +
Sbjct: 84 YCA--NPVFKAYLVSS-----SPKQALGFYFDILRFGFV-PDSYTFVSLISCIEKTCCVD 135
Query: 140 EGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKR 199
GK HG +K G D V ++L+ MY CG ++ A LF
Sbjct: 136 SGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFV-----------------E 178
Query: 200 MQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVF 259
+ + +V WN +I G VR GD+ A+ KLF++MP ++++SWN+MIS Y ++ +F
Sbjct: 179 IPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLF 238
Query: 260 HDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC 319
+M N TLV +L A R L+ G+ VH + + V+ +A+IDMY KC
Sbjct: 239 REMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKC 298
Query: 320 GSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGL 379
V A ++F+ + + +N +TW+ +I +HGR L+ + M + P +V ++G+
Sbjct: 299 KEVGLARRIFDSL-SIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGV 357
Query: 380 LSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP--- 436
L C+ AGL+ +G+S ++ MV I+P H CM + + N+P
Sbjct: 358 LCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDED 417
Query: 437 IRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVE 496
+ P+ W LL + + GN +GE +A++L++ P + Y L NI++ G W V
Sbjct: 418 VTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNR 477
Query: 497 VRLKMKEMDVRKDPGCSWIEIDGVIH 522
VR +KE + + PGC +++ ++H
Sbjct: 478 VREMVKERKIGRIPGCGLVDLKEIVH 503
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 216/356 (60%), Gaps = 17/356 (4%)
Query: 203 GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR-SVVSWNVMISGYAQNGFFKEAMDVFHD 261
V+ + ++ + +GD+ +R++F++ P++ ++V W MIS Y +N EA+++F
Sbjct: 98 AVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKR 157
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYA--EKNEIEIDDVLGSAVIDMYAKC 319
M+ + + + + L A + LGA+++G+ ++ + K + +D L +++++MY K
Sbjct: 158 MEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKS 217
Query: 320 GSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM------QQAGVTPTD 373
G EKA ++F++ +K+ T++++I G A++G+A ++L+ ++KM Q +TP D
Sbjct: 218 GETEKARKLFDE-SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPND 276
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVL 433
V +IG+L ACSH+GL+EEG+ F M+ ++PR H+GCMVD +
Sbjct: 277 VTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFIN 336
Query: 434 NMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVG 493
MPI+P+ VIW+ LLGAC +HGNV++GE V R + +L G YVALSNI+AS+G W
Sbjct: 337 QMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDE 396
Query: 494 VVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR 549
++R ++++ R+ PG SWIE+ +I+EF+ S P + + M+ EIS +R
Sbjct: 397 KSKMRDRVRK---RRMPGKSWIELGSIINEFV----SGPDNNDEQLMMGEISEVLR 445
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 140/331 (42%), Gaps = 68/331 (20%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM-NNPNCFSWNTIIRAF 91
+QIHA K G ++ F S D+ YAR+ F + N W +I A+
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSVG--DVDYARQVFDETPEKQNIVLWTAMISAY 142
Query: 92 AETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
E + N +EA+ F +M +E +E + L ACA +G +Q G+EI+ +K
Sbjct: 143 TENE-----NSVEAIELFKRMEAEK-IELDGVIVTVALSACADLGAVQMGEEIYSRSIKR 196
Query: 152 G--LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWN 209
L D + ++L+ MY G E A LF ++ M++ V +
Sbjct: 197 KRRLAMDLTLRNSLLNMYVKSGETEKARKLF----------------DESMRKDVTT-YT 239
Query: 210 VMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD--- 266
MI G YA NG +E++++F M+ D
Sbjct: 240 SMIFG-------------------------------YALNGQAQESLELFKKMKTIDQSQ 268
Query: 267 ---VSPNYITLVSVLPAISRLGALELGK--WVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
++PN +T + VL A S G +E GK + + + N ++ + ++D++ + G
Sbjct: 269 DTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYN-LKPREAHFGCMVDLFCRSGH 327
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHG 352
++ A + ++ K N + W ++G ++HG
Sbjct: 328 LKDAHEFINQMPIKPNTVIWRTLLGACSLHG 358
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/547 (29%), Positives = 263/547 (48%), Gaps = 73/547 (13%)
Query: 13 PTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKF 72
T +L P +C + Q + +H K+GL D ++ F S +L A
Sbjct: 41 ATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYS--KCAELGSAEVL 98
Query: 73 FTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
F +M + + SWNT+I A++++ + EA+ F M E VE + T ++L A
Sbjct: 99 FREMKDKSTVSWNTMIGAYSQSGLQE-----EAITVFKNM-FEKNVEISPVTIINLLSAH 152
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMC---------------------- 170
+ +H VVK G+ ND V ++LV Y+ C
Sbjct: 153 VSH------EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLT 206
Query: 171 ---------GVMEDAYLLFSNY---------------------VSHFDNNST---KLVRN 197
G M+ A + FS SH D + +++
Sbjct: 207 SIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS 266
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
+ +VV N +I + + D+ LF ++ + ++SWN +ISG Q+G A +
Sbjct: 267 GLCTKTLVV--NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFE 324
Query: 258 VFHDMQM-GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
VFH M + G + P+ IT+ S+L S+L L LGK +H Y +N E ++ + +A+IDMY
Sbjct: 325 VFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMY 384
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
AKCG+ +A VF+ I+ A TW+++I G ++ G + AL Y +M++ G+ P ++ +
Sbjct: 385 AKCGNEVQAESVFKSIKAPCTA-TWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITF 443
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
+G+LSAC+H G ++EG+ F M+K GI P ++HY MV + M
Sbjct: 444 LGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMD 503
Query: 437 IRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVE 496
I+PD +W ALL AC +H +++GE VAR + L + G YV +SN++A+ W VV
Sbjct: 504 IKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVR 563
Query: 497 VRLKMKE 503
VR MK+
Sbjct: 564 VRNMMKD 570
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 231 MPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG 290
MP+R V WN +I GY++NG+ +A +F M SP+ TLV++LP + G + G
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 291 KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAM 350
+ VH A K+ +E+D + +A+I Y+KC + A +F ++++ K+ ++W+ +IG +
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD-KSTVSWNTMIGAYSQ 119
Query: 351 HGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
G +A+ ++ M + V + V I LLSA
Sbjct: 120 SGLQEEAITVFKNMFEKNVEISPVTIINLLSA 151
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 173/419 (41%), Gaps = 46/419 (10%)
Query: 84 WNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKE 143
WN +I ++ + +A F M +G P+ T ++L C + G + +G+
Sbjct: 9 WNALICGYSRNGYE-----CDAWKLFIVMLQQGF-SPSATTLVNLLPFCGQCGFVSQGRS 62
Query: 144 IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEG 203
+HG K GL+ D V + L+ Y+ C + A +LF + M++
Sbjct: 63 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLF-----------------REMKDK 105
Query: 204 VVVLWNVMIDGFVRLG----DIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVF 259
V WN MI + + G I + +F K + S V+ ++S + + +
Sbjct: 106 STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH-------EPL 158
Query: 260 HDMQMGDVSPNYITLV-SVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG-SAVIDMYA 317
H + + N I++V S++ A SR G L + LYA + D ++G ++++ YA
Sbjct: 159 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE--RLYASAKQ---DSIVGLTSIVSCYA 213
Query: 318 KCGSVEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
+ G ++ A+ F K K +A+ I+ G + + + ++G+ +
Sbjct: 214 EKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTL 273
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLN 434
V GL++ S +E LF + + I GC V +L
Sbjct: 274 VVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGC-VQSGRASTAFEVFHQMMLT 332
Query: 435 MPIRPDDVIWKALLGACKMHGNVKMGERV-ARTLMKLFPHDSGSYVALSNIFASRGNWV 492
+ PD + +LL C + +G+ + TL F +++ AL +++A GN V
Sbjct: 333 GGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEV 391
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 225/451 (49%), Gaps = 55/451 (12%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
D++ R+ F+ + P+ +WN ++ ++ +Y++ EA+ F QM + L +P++ T
Sbjct: 331 DVETGRRIFSSIPQPSVSAWNAMLSGYS-----NYEHYEEAISNFRQMQFQNL-KPDKTT 384
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
+L +CA++ ++ GK+IHG V++ + + + S L+ +Y+ C ME + +F + +
Sbjct: 385 LSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCI 444
Query: 185 SHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMIS 244
+ D + WN MIS
Sbjct: 445 NELD-----------------------------------------------IACWNSMIS 457
Query: 245 GYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIE 303
G+ N +A+ +F M Q + PN + +VL + SRL +L G+ H K+
Sbjct: 458 GFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYV 517
Query: 304 IDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRK 363
D + +A+ DMY KCG ++ A Q F+ + +KN + W+ +I G +GR ++A+ YRK
Sbjct: 518 SDSFVETALTDMYCKCGEIDSARQFFDAVL-RKNTVIWNEMIHGYGHNGRGDEAVGLYRK 576
Query: 364 MQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXX 423
M +G P + ++ +L+ACSH+GL+E G + + M ++ GIEP ++HY C+VD
Sbjct: 577 MISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAG 636
Query: 424 XXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSN 483
P + V+W+ LL +C++HG+V + RVA LM+L P S +YV LSN
Sbjct: 637 RLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSN 696
Query: 484 IFASRGNWVGVVEVRLKMKEMDVRKDPGCSW 514
++S W ++ M + V K PG SW
Sbjct: 697 TYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 727
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 181/413 (43%), Gaps = 69/413 (16%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAE 93
+ H +KTGL + +L + + Y + F ++ PN S+ +I A
Sbjct: 125 RCHGVAVKTGLDKNIFVGNALLSMYAKCGFI-VDYGVRVFESLSQPNEVSYTAVIGGLAR 183
Query: 94 TDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVL------KACAKMGRI---QEGKEI 144
+ LEA+ F MC +G V+ + ++L + C + I + GK+I
Sbjct: 184 EN-----KVLEAVQMFRLMCEKG-VQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQI 237
Query: 145 HGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGV 204
H ++LG D + ++L+ +YA M A L+F+ M E
Sbjct: 238 HCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA-----------------EMPEVN 280
Query: 205 VVLWNVMIDGF-----------------------------------VRLGDIGASRKLFN 229
VV WN+MI GF R GD+ R++F+
Sbjct: 281 VVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFS 340
Query: 230 KMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALEL 289
+PQ SV +WN M+SGY+ ++EA+ F MQ ++ P+ TL +L + +RL LE
Sbjct: 341 SIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEG 400
Query: 290 GKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLA 349
GK +H + EI + + S +I +Y++C +E + +F+ N+ + W+++I G
Sbjct: 401 GKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFR 460
Query: 350 MHGRANDALDYYRKMQQAGV-TPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+ AL +R+M Q V P + + +LS+CS + GR +VK
Sbjct: 461 HNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVK 513
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 175/425 (41%), Gaps = 92/425 (21%)
Query: 65 DLKYARKFFTQMNNPNCFSWNT----------------IIRAFAETDDDDYKNPLEAL-- 106
D YARK F +M+ + +SWN + E D + N + L
Sbjct: 22 DGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVR 81
Query: 107 -GF-------FGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEF 158
GF + +M +G + P+RFT SVL AC+K+ G HG VK GLD + F
Sbjct: 82 KGFEEKALVVYKRMVCDGFL-PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIF 140
Query: 159 VASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRL 218
V + L+ MYA CG + D GV
Sbjct: 141 VGNALLSMYAKCGFIVDY--------------------------GV-------------- 160
Query: 219 GDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVL 278
++F + Q + VS+ +I G A+ EA+ +F M V + + L ++L
Sbjct: 161 -------RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 213
Query: 279 P---------AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF 329
++S + ELGK +H A + D L ++++++YAK + A +F
Sbjct: 214 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 273
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLI 389
++ + N ++W+ +I G R++ ++++ +M+ +G P +V I +L AC +G +
Sbjct: 274 AEMP-EVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDV 332
Query: 390 EEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP---IRPDDVIWKA 446
E GR +F+ + +P V + M+ M ++PD
Sbjct: 333 ETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSV 387
Query: 447 LLGAC 451
+L +C
Sbjct: 388 ILSSC 392
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 125/232 (53%), Gaps = 19/232 (8%)
Query: 151 LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNV 210
+G+ +D ++ + L+ +Y CG + A +F D S + V + WN
Sbjct: 1 MGMKSDTYLCNRLLDLYIECGDGDYARKVF-------DEMSVRDVYS----------WNA 43
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPN 270
+ ++GD+G + ++F+ MP+R VVSWN MIS + GF ++A+ V+ M P+
Sbjct: 44 FLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPS 103
Query: 271 YITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS-VEKAIQVF 329
TL SVL A S++ G H A K ++ + +G+A++ MYAKCG V+ ++VF
Sbjct: 104 RFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVF 163
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
E + ++ N ++++A+IGGLA + +A+ +R M + GV V +LS
Sbjct: 164 ESL-SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 214
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 142/342 (41%), Gaps = 59/342 (17%)
Query: 14 THPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFF 73
T S + AR + ++ KQIH I+T + + + ++ S ++ ++ F
Sbjct: 383 TTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC-IFD 441
Query: 74 TQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACA 133
+N + WN++I F D +AL F +M ++ PN +F +VL +C+
Sbjct: 442 DCINELDIACWNSMISGFRHNMLDT-----KALILFRRMHQTAVLCPNETSFATVLSSCS 496
Query: 134 KMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTK 193
++ + G++ HG VVK G +D FV + L MY CG ++ A F
Sbjct: 497 RLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF----------DAV 546
Query: 194 LVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFK 253
L +N V+WN MI GY NG
Sbjct: 547 LRKN-------TVIWNEMIH-------------------------------GYGHNGRGD 568
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEK---NEIEIDDVLGS 310
EA+ ++ M P+ IT VSVL A S G +E G + ++ E E+D +
Sbjct: 569 EAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYI-- 626
Query: 311 AVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHG 352
++D + G +E A ++ E K +++ W ++ +HG
Sbjct: 627 CIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHG 668
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 170/599 (28%), Positives = 283/599 (47%), Gaps = 81/599 (13%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIK-QLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRR 64
EP T+T L I C+S+ ++IH + I++G G IL + SD
Sbjct: 124 EPNTST-------LVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL 176
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
ARK F +M+ + SW+ +IR++ ++ K P+ L F +M E EP+ T
Sbjct: 177 S---ARKLFDEMSERDVISWSVVIRSYVQS-----KEPVVGLKLFKEMVHEAKTEPDCVT 228
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLD-NDEFVASNLVRMYAMCGVMEDAYLLFS-- 181
SVLKAC M I G+ +HGF ++ G D D FV ++L+ MY+ ++ A+ +F
Sbjct: 229 VTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDET 288
Query: 182 ---NYVSHFDNNSTKLVRNKRMQE------------------------------------ 202
N VS +++ V N+R E
Sbjct: 289 TCRNIVS-WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPC 347
Query: 203 ----GVV---------VLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQN 249
GV+ V + +ID + + + + + M + VVS + MISG A
Sbjct: 348 KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA 407
Query: 250 GFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV-L 308
G EA+ +F M+ +PN IT++S+L A S L KW H A + + I+D+ +
Sbjct: 408 GRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 464
Query: 309 GSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
G++++D YAKCG++E A + F++I +KN I+W+ II A++G + AL + +M+Q G
Sbjct: 465 GTSIVDAYAKCGAIEMARRTFDQI-TEKNIISWTVIISAYAINGLPDKALALFDEMKQKG 523
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXX 428
TP V Y+ LSAC+H GL+++G +F MV+ +P ++HY C+VD
Sbjct: 524 YTPNAVTYLAALSACNHGGLVKKGLMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEIDTA 582
Query: 429 XXXVLNMP--IRPDDVIWKALLGACK-MHGNVKMGERVARTLMKLFPHDSGSYVALSNIF 485
+ N+P ++ W A+L C+ + + V +++L P S Y+ S+ F
Sbjct: 583 VELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTF 642
Query: 486 ASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEI 544
A+ +W V +R +KE VR G S + + FL D+ E+ +++ +
Sbjct: 643 AAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSL 701
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 152/321 (47%), Gaps = 60/321 (18%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
DL + F MN+ + SWN I+ DY E L +F ++ G EPN T
Sbjct: 76 DLCSGLREFDCMNSRDSVSWNVIVFGLL-----DYGFEEEGLWWFSKLRVWGF-EPNTST 129
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
V+ AC + +G++IHG+V++ G V ++++ MYA
Sbjct: 130 LVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYA---------------- 171
Query: 185 SHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMIS 244
D++S ++RKLF++M +R V+SW+V+I
Sbjct: 172 ---DSDSL------------------------------SARKLFDEMSERDVISWSVVIR 198
Query: 245 GYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIE 303
Y Q+ + +F +M P+ +T+ SVL A + + +++G+ VH ++ + +
Sbjct: 199 SYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFD 258
Query: 304 IDDV-LGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYR 362
+ DV + +++IDMY+K V+ A +VF++ +N ++W++I+ G + R ++AL+ +
Sbjct: 259 LADVFVCNSLIDMYSKGFDVDSAFRVFDET-TCRNIVSWNSILAGFVHNQRYDEALEMFH 317
Query: 363 KMQQAGVTPTDVVYIGLLSAC 383
M Q V +V + LL C
Sbjct: 318 LMVQEAVEVDEVTVVSLLRVC 338
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 97/194 (50%), Gaps = 5/194 (2%)
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
N + D +++ GD+ + + F+ M R VSWNV++ G GF +E + F +++
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQV 328
PN TLV V+ A L G+ +H Y ++ + ++++ MYA S+ A ++
Sbjct: 125 PNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKL 181
Query: 329 FEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM-QQAGVTPTDVVYIGLLSACSHAG 387
F+++ ++++ I+WS +I L +++M +A P V +L AC+
Sbjct: 182 FDEM-SERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 388 LIEEGRSLFNHMVK 401
I+ GRS+ ++
Sbjct: 241 DIDVGRSVHGFSIR 254
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 214/420 (50%), Gaps = 51/420 (12%)
Query: 123 FTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSN 182
+ S +++C + G H +K G +D ++ S+LV +Y G +E+AY
Sbjct: 121 YGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAY----- 175
Query: 183 YVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVM 242
K+F +MP+R+VVSW M
Sbjct: 176 -------------------------------------------KVFEEMPERNVVSWTAM 192
Query: 243 ISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEI 302
ISG+AQ + ++ M+ PN T ++L A + GAL G+ VH +
Sbjct: 193 ISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGL 252
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYR 362
+ + +++I MY KCG ++ A ++F++ NK + ++W+++I G A HG A A++ +
Sbjct: 253 KSYLHISNSLISMYCKCGDLKDAFRIFDQFSNK-DVVSWNSMIAGYAQHGLAMQAIELFE 311
Query: 363 KMQ-QAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXX 421
M ++G P + Y+G+LS+C HAGL++EGR FN M + G++P + HY C+VD
Sbjct: 312 LMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEH-GLKPELNHYSCLVDLLGR 370
Query: 422 XXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVAL 481
+ NMP++P+ VIW +LL +C++HG+V G R A + L P + ++V L
Sbjct: 371 FGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQL 430
Query: 482 SNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSML 541
+N++AS G W VR MK+ ++ +PGCSWIEI+ + F ED S+ R EI +L
Sbjct: 431 ANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVL 490
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 143/321 (44%), Gaps = 61/321 (19%)
Query: 35 IHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAET 94
H +K G I D + ++ D +++ A K F +M N SW +I FA+
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVL--YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQE 199
Query: 95 DDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLD 154
D L + +M + +PN +TF ++L AC G + +G+ +H + +GL
Sbjct: 200 WRVDI-----CLKLYSKM-RKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLK 253
Query: 155 NDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDG 214
+ ++++L+ MY CG ++DA+ +F F N VV WN M
Sbjct: 254 SYLHISNSLISMYCKCGDLKDAFRIF----DQFSNKD-------------VVSWNSM--- 293
Query: 215 FVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQ-MGDVSPNYIT 273
I+GYAQ+G +A+++F M P+ IT
Sbjct: 294 ----------------------------IAGYAQHGLAMQAIELFELMMPKSGTKPDAIT 325
Query: 274 LVSVLPAISRLGALELG-KWVHLYAEKN-EIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK 331
+ VL + G ++ G K+ +L AE + E++ S ++D+ + G +++A+++ E
Sbjct: 326 YLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHY--SCLVDLLGRFGLLQEALELIEN 383
Query: 332 IENKKNAITWSAIIGGLAMHG 352
+ K N++ W +++ +HG
Sbjct: 384 MPMKPNSVIWGSLLFSCRVHG 404
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 161/591 (27%), Positives = 278/591 (47%), Gaps = 65/591 (10%)
Query: 16 PSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQ 75
P +L ++ I QL+ +H + G D +L D + A+ F Q
Sbjct: 147 PVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDH--VGDAKDLFDQ 204
Query: 76 MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKM 135
M + SWNT+I +A N E L +M +GL P++ TF + L M
Sbjct: 205 MEQRDMVSWNTMISGYASVG-----NMSEILKLLYRMRGDGL-RPDQQTFGASLSVSGTM 258
Query: 136 GRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCG---------------------VM- 173
++ G+ +H +VK G D D + + L+ MY CG VM
Sbjct: 259 CDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMI 318
Query: 174 ---------EDAYLLFSNYVSHFDNNSTKL-------------------VRNKRMQEGVV 205
E A ++FS + + S++ V ++ G
Sbjct: 319 SGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYT 378
Query: 206 V---LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM 262
+ N +I + + G + S +F +M +R +VSWN +ISGYAQN +A+ +F +M
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Query: 263 QMGDVSP-NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
+ V + T+VS+L A S GAL +GK +H ++ I ++ +A++DMY+KCG
Sbjct: 439 KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGY 498
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
+E A + F+ I + K+ ++W +I G HG+ + AL+ Y + +G+ P V+++ +LS
Sbjct: 499 LEAAQRCFDSI-SWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLS 557
Query: 382 ACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDD 441
+CSH G++++G +F+ MV+ G+EP EH C+VD RP
Sbjct: 558 SCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSI 617
Query: 442 VIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKM 501
+ +L AC+ +G ++ + + +++L P D+G YV L + FA+ W V E +M
Sbjct: 618 DVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQM 677
Query: 502 KEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAG 552
+ + ++K PG S IE++G F + SH + + S+L+ +S + G
Sbjct: 678 RSLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQFG 726
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 53/299 (17%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
+ L F M + L+ P+ FTFPS+LKACA + R+ G IH V+ G +D +++S+L
Sbjct: 29 QVLSTFSSMLANKLL-PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGA 223
V + + + G +
Sbjct: 88 VNL------------------------------------------------YAKFGLLAH 99
Query: 224 SRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISR 283
+RK+F +M +R VV W MI Y++ G EA + ++M+ + P +TL+ +L +
Sbjct: 100 ARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLE 159
Query: 284 LGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSA 343
+ L+ +H +A + D + ++++++Y KC V A +F+++E +++ ++W+
Sbjct: 160 ITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME-QRDMVSWNT 215
Query: 344 IIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV 402
+I G A G ++ L +M+ G+ P + LS +E GR L +VK
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKT 274
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 165/392 (42%), Gaps = 76/392 (19%)
Query: 20 FPQIAR-CKSIKQLK---QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQ 75
FP + + C S+++L IH + G D ++ ++ + L +ARK F +
Sbjct: 49 FPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGL--LAHARKVFEE 106
Query: 76 MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF-----PSVLK 130
M + W +I ++ G G+ CS LV RF ++L+
Sbjct: 107 MRERDVVHWTAMIGCYSRA------------GIVGEACS--LVNEMRFQGIKPGPVTLLE 152
Query: 131 ACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNN 190
+ + I + + +H F V G D D V ++++ +Y C + DA LF
Sbjct: 153 MLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLF---------- 202
Query: 191 STKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNG 250
+M++ +V WN MI G+ +G++ KL +M
Sbjct: 203 -------DQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR------------------ 237
Query: 251 FFKEAMDVFHDMQMGD-VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG 309
GD + P+ T + L + LE+G+ +H K ++D L
Sbjct: 238 --------------GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK 283
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV 369
+A+I MY KCG E + +V E I N K+ + W+ +I GL GRA AL + +M Q+G
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPN-KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGS 342
Query: 370 TPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+ ++++C+ G + G S+ ++++
Sbjct: 343 DLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 239 WNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAE 298
+N I+ + +G K+ + F M + P+ T S+L A + L L G +H
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 299 KNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDAL 358
N D + S+++++YAK G + A +VFE++ +++ + W+A+IG + G +A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR-ERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 359 DYYRKMQQAGVTPTDVVYIGLLSA 382
+M+ G+ P V + +LS
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSG 156
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 269/507 (53%), Gaps = 33/507 (6%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+ +HAH + +G+ AA+++ F + + ARK F +M + +I A A
Sbjct: 36 RVLHAHLVTSGIARLTRIAAKLVTFYVECGK--VLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+ Y+ E+L FF +M +GL + + F PS+LKA + + GK IH V+K
Sbjct: 94 R--NGYYQ---ESLDFFREMYKDGL-KLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFS 147
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNY-----------VSHFDNNST-----KLVR 196
++D F+ S+L+ MY+ G + +A +FS+ +S + NNS LV+
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVK 207
Query: 197 NKRMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMP----QRSVVSWNVMISGYAQN 249
+ ++ G+ V+ WN +I GF + + ++ M + VVSW +ISG N
Sbjct: 208 DMKLL-GIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHN 266
Query: 250 GFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG 309
++A D F M + PN T++++LPA + L ++ GK +H Y+ +E +
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVR 326
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV 369
SA++DMY KCG + +A+ +F K KK +T++++I A HG A+ A++ + +M+ G
Sbjct: 327 SALLDMYGKCGFISEAMILFRKTP-KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE 385
Query: 370 TPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXX 429
+ + +L+ACSHAGL + G++LF M I PR+EHY CMVD
Sbjct: 386 KLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAY 445
Query: 430 XXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRG 489
+ M + PD +W ALL AC+ HGN+++ A+ L +L P +SG+ + L++++A+ G
Sbjct: 446 EMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAG 505
Query: 490 NWVGVVEVRLKMKEMDVRKDPGCSWIE 516
+W VV ++ +K+ R+ G SW+E
Sbjct: 506 SWESVVRMKKMIKKKRFRRFLGSSWVE 532
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 182/321 (56%), Gaps = 1/321 (0%)
Query: 236 VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL 295
++ WN MISGY Q G +E + +++DM+ + P+ T SV A S L LE GK H
Sbjct: 158 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 217
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAN 355
K I+ + ++ SA++DMY KC S +VF+++ + N ITW+++I G HG+ +
Sbjct: 218 VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYHGKVS 276
Query: 356 DALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCM 415
+ L + KM++ G P V ++ +L+AC+H GL+++G F M + GIEP +HY M
Sbjct: 277 EVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAM 336
Query: 416 VDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDS 475
VD V+ P + +W +LLGAC++HGNVK+ E A ++L P +
Sbjct: 337 VDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNG 396
Query: 476 GSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAK 535
G+YV +N +AS G +VR KM+ V+KDPG S IE+ G +H F+ +D SH ++
Sbjct: 397 GNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSE 456
Query: 536 EIRSMLEEISNRIRSAGYRPN 556
+I + E+++ Y P+
Sbjct: 457 KIYKKVHEMTSFFMDIDYYPD 477
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 138/342 (40%), Gaps = 78/342 (22%)
Query: 16 PSSLFPQIARCKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKF 72
P + + CK K+ K+IHA G + ++L ++SD
Sbjct: 108 PETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSD---------- 157
Query: 73 FTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
WN +I + + + E L + M +V P+++TF SV +AC
Sbjct: 158 --------LIPWNAMISGYVQKGLEQ-----EGLFIYYDMRQNRIV-PDQYTFASVFRAC 203
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNST 192
+ + R++ GK H ++K + ++
Sbjct: 204 SALDRLEHGKRAHAVMIKRCIKSN------------------------------------ 227
Query: 193 KLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFF 252
+++ + ++D + + ++F+++ R+V++W +ISGY +G
Sbjct: 228 ------------IIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 275
Query: 253 KEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNE--IEIDDVLGS 310
E + F M+ PN +T + VL A + G ++ G W H Y+ K + IE + +
Sbjct: 276 SEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYA 334
Query: 311 AVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHG 352
A++D + G +++A + K K++ W +++G +HG
Sbjct: 335 AMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 376
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 153/559 (27%), Positives = 267/559 (47%), Gaps = 67/559 (11%)
Query: 13 PTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKF 72
P +SL + S Q HAH +K+GL D +L L ++ R+
Sbjct: 61 PKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLS-LYFKLGPGMRETRRV 119
Query: 73 FTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
F + SW +++ + K ++AL F +M S GL + N FT S +KAC
Sbjct: 120 FDGRFVKDAISWTSMMSGYVTG-----KEHVKALEVFVEMVSFGL-DANEFTLSSAVKAC 173
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF-----------S 181
+++G ++ G+ HG V+ G + + F++S L +Y + DA +F +
Sbjct: 174 SELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWT 233
Query: 182 NYVSHFDNN----------------------------------------STKLVRNKRMQ 201
+S F N K + K +
Sbjct: 234 AVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLIT 293
Query: 202 EGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDV 258
G+ VV+ + ++D + + G + +R++FN M +++ VSW+ ++ GY QNG ++A+++
Sbjct: 294 NGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEI 353
Query: 259 FHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAK 318
F +M+ D+ +VL A + L A+ LGK +H + + ++ SA+ID+Y K
Sbjct: 354 FREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGK 409
Query: 319 CGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIG 378
G ++ A +V+ K+ + +N ITW+A++ LA +GR +A+ ++ M + G+ P + +I
Sbjct: 410 SGCIDSASRVYSKM-SIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIA 468
Query: 379 LLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIR 438
+L+AC H G+++EGR+ F M K GI+P EHY CM+D + R
Sbjct: 469 ILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECR 528
Query: 439 PDDVIWKALLGACKMHGNV-KMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEV 497
D +W LLG C + + ++ ER+A+ +M+L P SYV LSN++ + G + +
Sbjct: 529 NDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNI 588
Query: 498 RLKMKEMDVRKDPGCSWIE 516
R M V K G SWI+
Sbjct: 589 RKLMVRRGVAKTVGQSWID 607
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 153/544 (28%), Positives = 261/544 (47%), Gaps = 67/544 (12%)
Query: 30 KQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIR 89
KQL IH + I G + L ++L L + + D+K+ARK F +++ + SW +I
Sbjct: 29 KQLLLIHGNSITNGFCSN-LQLKDMLIDLYLK-QGDVKHARKLFDRISKRDVVSWTAMIS 86
Query: 90 AFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVV 149
F+ +P +AL F +M E V+ N+FT+ SVLK+C +G ++EG +IHG V
Sbjct: 87 RFSRCG----YHP-DALLLFKEMHRED-VKANQFTYGSVLKSCKDLGCLKEGMQIHGSVE 140
Query: 150 KLGLDNDEFVASNLVRMYAMCGVME---------------------DAYLLFSNYVSHFD 188
K + V S L+ +YA CG ME D Y + + F
Sbjct: 141 KGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFS 200
Query: 189 NNSTKLVRNKR---------MQEGVVV-----------------------LWNVMIDGFV 216
L K+ ++ +VV L +++ +V
Sbjct: 201 LFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYV 260
Query: 217 RLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ-NGFFKEAMDVFHDMQMGDVSPNYITLV 275
+ G + + KL +R ++S +I+G++Q N +A D+F DM + + +
Sbjct: 261 KCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVS 320
Query: 276 SVLPAISRLGALELGKWVHLYAEKN-EIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN 334
S+L + + ++ +G+ +H +A K+ +I D LG+++IDMYAK G +E A+ FE+++
Sbjct: 321 SMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK- 379
Query: 335 KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRS 394
+K+ +W+++I G HG A+D Y +M+ + P DV ++ LLSACSH G E G
Sbjct: 380 EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWK 439
Query: 395 LFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP--IRPDDVIWKALLGACK 452
+++ M+ GIE R EH C++D + + + W A L AC+
Sbjct: 440 IYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACR 499
Query: 453 MHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEM-DVRKDPG 511
HGNV++ + A L+ + P +Y+ L++++A+ G W + R MKE K PG
Sbjct: 500 RHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPG 559
Query: 512 CSWI 515
S +
Sbjct: 560 YSLV 563
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 186/444 (41%), Gaps = 76/444 (17%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIKQLK---QIHAHFIKTGLIGDPLAAAEILKFLSVSD 62
E A + T+ S L CK + LK QIH K G+ + + +L +
Sbjct: 107 EDVKANQFTYGSVL----KSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCG 162
Query: 63 RRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNR 122
+ ++ AR F M + SWN +I + D + F M +EG +P+
Sbjct: 163 K--MEEARLQFDSMKERDLVSWNAMIDGYTANACAD-----TSFSLFQLMLTEG-KKPDC 214
Query: 123 FTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF-- 180
FTF S+L+A + ++ E+HG +KLG + +LV Y CG + +A+ L
Sbjct: 215 FTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEG 274
Query: 181 ---------SNYVSHFD--NNSTK--------LVRNKRMQEGVVV--------------- 206
+ ++ F NN T ++R K + VVV
Sbjct: 275 TKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTI 334
Query: 207 -------------------LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYA 247
L N +ID + + G+I + F +M ++ V SW +I+GY
Sbjct: 335 GRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYG 394
Query: 248 QNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG-KWVHLYAEKNEIEIDD 306
++G F++A+D+++ M+ + PN +T +S+L A S G ELG K K+ IE +
Sbjct: 395 RHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEARE 454
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKIEN--KKNAITWSAIIGGLAMHGRANDALDYYRKM 364
S +IDM A+ G +E+A + E ++ TW A + HG N L
Sbjct: 455 EHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHG--NVQLSKVAAT 512
Query: 365 QQAGVTPTDVV-YIGLLSACSHAG 387
Q + P V YI L S + G
Sbjct: 513 QLLSMEPRKPVNYINLASVYAANG 536
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 234/456 (51%), Gaps = 48/456 (10%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
ARK F +M N +WN +I + D + A G F ++ V N T+ +
Sbjct: 19 ARKVFDEMPERNVATWNAMIGGYMSNGD-----AVLASGLFEEIS----VCRNTVTWIEM 69
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGV------MEDAYLLFSN 182
+K K I++ +E+ + F N+ M GV MEDA F +
Sbjct: 70 IKGYGKRIEIEKAREL--------FERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFED 121
Query: 183 YVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVM 242
+ E +W++M+ G+ R+GD+ +R +F ++ R +V WN +
Sbjct: 122 -----------------IPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTL 164
Query: 243 ISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEI 302
I+GYAQNG+ +A+D F +MQ P+ +T+ S+L A ++ G L++G+ VH I
Sbjct: 165 IAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGI 224
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYR 362
E++ + +A+IDMYAKCG +E A VFE I + A +++I LA+HG+ +AL+ +
Sbjct: 225 ELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACC-NSMISCLAIHGKGKEALEMFS 283
Query: 363 KMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXX 422
M+ + P ++ +I +L+AC H G + EG +F+ M K ++P V+H+GC++
Sbjct: 284 TMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRS 342
Query: 423 XXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSY---- 478
V M ++P+D + ALLGACK+H + +M E+V + +++ + SY
Sbjct: 343 GKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSENH 401
Query: 479 -VALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCS 513
++SN++A W +R++M++ + K PG S
Sbjct: 402 LASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 437
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 138/338 (40%), Gaps = 85/338 (25%)
Query: 62 DRRDLKYARKFFTQMNNPNCFS-------------------------------WNTIIRA 90
+ R ++ ARKFF + N F WNT+I
Sbjct: 108 NNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAG 167
Query: 91 FAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVK 150
+A+ D +A+ F M EG EP+ T S+L ACA+ GR+ G+E+H +
Sbjct: 168 YAQNGYSD-----DAIDAFFNMQGEGY-EPDAVTVSSILSACAQSGRLDVGREVHSLINH 221
Query: 151 LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNV 210
G++ ++FV++ L+ MYA CG +E+A
Sbjct: 222 RGIELNQFVSNALIDMYAKCGDLENA---------------------------------- 247
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPN 270
+F + RSV N MIS A +G KEA+++F M+ D+ P+
Sbjct: 248 --------------TSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPD 293
Query: 271 YITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFE 330
IT ++VL A G L G + + +++ + +I + + G +++A ++ +
Sbjct: 294 EITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVK 353
Query: 331 KIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
++ K N A++G +H A + ++ AG
Sbjct: 354 EMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAG 391
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 32/246 (13%)
Query: 159 VASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRL 218
V S+L+ MY CG + A +F M E V WN MI G++
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFD-----------------EMPERNVATWNAMIGGYMSN 44
Query: 219 GDIGASRKLFNKMPQ-RSVVSWNVMISGYAQNGFFKEAMDVFHDM--QMGDVSPNYITLV 275
GD + LF ++ R+ V+W MI GY + ++A ++F M ++ +V + ++
Sbjct: 45 GDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKA-WSVML 103
Query: 276 SVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK 335
V ++ + K+ EKN + S ++ Y + G V +A +F ++
Sbjct: 104 GVY--VNNRKMEDARKFFEDIPEKNAF-----VWSLMMSGYFRIGDVHEARAIFYRV-FA 155
Query: 336 KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGR-- 393
++ + W+ +I G A +G ++DA+D + MQ G P V +LSAC+ +G ++ GR
Sbjct: 156 RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 215
Query: 394 -SLFNH 398
SL NH
Sbjct: 216 HSLINH 221
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQ 366
++GS++I MY KCG V A +VF+++ ++N TW+A+IGG +G DA+ ++
Sbjct: 1 MVGSSLISMYGKCGCVVSARKVFDEMP-ERNVATWNAMIGGYMSNG---DAVLASGLFEE 56
Query: 367 AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
V V +I ++ IE+ R LF M
Sbjct: 57 ISVCRNTVTWIEMIKGYGKRIEIEKARELFERM 89
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 187/354 (52%), Gaps = 21/354 (5%)
Query: 166 MYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASR 225
MY + G M DA+ +F M E V WNVMI G LGD +
Sbjct: 1 MYLVGGNMIDAHKVFD-----------------EMPERNPVTWNVMITGLTNLGDFEKAL 43
Query: 226 KLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD-VSPNYITLVSVLPAISRL 284
KMP R+VVSW +I GYA+ KEA+ +F M D + PN IT++++LPA+ L
Sbjct: 44 CFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNL 103
Query: 285 GALELGKWVHLYAEKNE-IEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN-KKNAITWS 342
G L++ VH Y K + D + +++ID YAKCG ++ A + F +I N +KN ++W+
Sbjct: 104 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 163
Query: 343 AIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG-RSLFNHMVK 401
+I A+HG +A+ ++ M++ G+ P V I +L+ACSH GL EE FN MV
Sbjct: 164 TMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVN 223
Query: 402 VVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGE 461
I P V+HYGC+VD L +PI V+W+ LLGAC ++ + ++ E
Sbjct: 224 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAE 283
Query: 462 RVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWI 515
RV R LM+L G YV +SNIF G ++ R +M V K PG S +
Sbjct: 284 RVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 337
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 137/307 (44%), Gaps = 58/307 (18%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
D + A F +M N SW TII +A D P EA+ F +M + ++PN T
Sbjct: 38 DFEKALCFLEKMPNRTVVSWTTIIDGYARVD-----KPKEAILLFSRMVACDAIKPNEIT 92
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLG-LDNDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
++L A +G ++ +H +V K G + D V ++L+ YA CG ++ A+
Sbjct: 93 ILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAF------ 146
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP--QRSVVSWNV 241
K F ++P ++++VSW
Sbjct: 147 ------------------------------------------KFFIEIPNGRKNLVSWTT 164
Query: 242 MISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISR--LGALELGKWVHLYAEK 299
MIS +A +G KEA+ +F DM+ + PN +T++SVL A S L E ++ + +
Sbjct: 165 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 224
Query: 300 NEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALD 359
+I D ++DM + G +E+A ++ +I ++ A+ W ++G +++ A A
Sbjct: 225 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 284
Query: 360 YYRKMQQ 366
RK+ +
Sbjct: 285 VTRKLME 291
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 145/568 (25%), Positives = 263/568 (46%), Gaps = 76/568 (13%)
Query: 11 TRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYAR 70
T+ T+P L A ++I K IH+H + D ++ F + +L+ A
Sbjct: 102 TKYTYPFVL-KACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG--ELEMAI 158
Query: 71 KFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLK 130
K F +M + +WN +I F+ + + +G F M + PN T +
Sbjct: 159 KVFDEMPKRDMVAWNAMISGFSL-----HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 131 ACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNN 190
A + G ++EGK +HG+ ++G ND V + ++ +YA + ++++ V D
Sbjct: 214 ALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA-----KSKCIIYARRVFDLDFK 268
Query: 191 STKL---------VRNKRMQEGVVVLWNVMID----------------GFVRLGDIGASR 225
++ V N+ ++E V + ++++ G R GD+ R
Sbjct: 269 KNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGR 328
Query: 226 -----------------------------------KLFNKMPQRSVVSWNVMISGYAQNG 250
+ F+++ + V+S+N +I+G N
Sbjct: 329 CVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNC 388
Query: 251 FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGS 310
+E+ +FH+M+ + P+ TL+ VL A S L AL G H Y + ++ + +
Sbjct: 389 RPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN 448
Query: 311 AVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
A++DMY KCG ++ A +VF+ + +K++ ++W+ ++ G +HG +AL + MQ+ GV
Sbjct: 449 ALMDMYTKCGKLDVAKRVFDTM-HKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVN 507
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV-VGIEPRVEHYGCMVDXXXXXXXXXXXX 429
P +V + +LSACSH+GL++EG+ LFN M + + PR++HY CM D
Sbjct: 508 PDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAY 567
Query: 430 XXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRG 489
V MP PD + LL AC + N ++G V++ + L + S V LSN +++
Sbjct: 568 DFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAE 626
Query: 490 NWVGVVEVRLKMKEMDVRKDPGCSWIEI 517
W +R+ K+ + K PG SW+++
Sbjct: 627 RWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 187/394 (47%), Gaps = 71/394 (18%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLS--VSDRRDLKYARKFFTQ 75
SL R +++ + IH H +K L L+++ +L L+ + +++ AR F +
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSL---TLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 76 MNNP--NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACA 133
+ +P N +W+ +IRA+A D + +AL + +M + G V P ++T+P VLKACA
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAE-----KALDLYYKMLNSG-VRPTKYTYPFVLKACA 114
Query: 134 KMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTK 193
+ I +GK IH V D +V + LV YA CG +E A +F
Sbjct: 115 GLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFD------------ 162
Query: 194 LVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFK 253
M + +V WN MISG++ +
Sbjct: 163 -----EMPKRDMVAWN-------------------------------AMISGFSLHCCLT 186
Query: 254 EAMDVFHDMQMGD-VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAV 312
+ + +F DM+ D +SPN T+V + PA+ R GAL GK VH Y + D V+ + +
Sbjct: 187 DVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGI 246
Query: 313 IDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM----QQAG 368
+D+YAK + A +VF+ ++ KKN +TWSA+IGG + +A + + +M A
Sbjct: 247 LDVYAKSKCIIYARRVFD-LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAM 305
Query: 369 VTPTDVVYIGL-LSACSHAGLIEEGRSLFNHMVK 401
VTP V IGL L C+ G + GR + + VK
Sbjct: 306 VTP---VAIGLILMGCARFGDLSGGRCVHCYAVK 336
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 151/339 (44%), Gaps = 73/339 (21%)
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLD-NDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
F S+L+ C + + G+ IH ++K L + V NL R+YA C +E A
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELA------- 54
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV--VSWNV 241
R +F+++P + ++W++
Sbjct: 55 -----------------------------------------RHVFDEIPHPRINPIAWDL 73
Query: 242 MISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNE 301
MI YA N F ++A+D+++ M V P T VL A + L A++ GK +H + ++
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 302 IEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYY 361
D + +A++D YAKCG +E AI+VF+++ K++ + W+A+I G ++H D + +
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMISGFSLHCCLTDVIGLF 192
Query: 362 RKMQQA-GVTPTDVVYIGLLSACSHAGLIEEGRSLF---------NHMVKVVGIEPRVEH 411
M++ G++P +G+ A AG + EG+++ N +V GI
Sbjct: 193 LDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK 252
Query: 412 YGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGA 450
C++ V ++ + ++V W A++G
Sbjct: 253 SKCII-----------YARRVFDLDFKKNEVTWSAMIGG 280
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 218/405 (53%), Gaps = 25/405 (6%)
Query: 151 LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNV 210
+GL ++ FV S ++ Y + DA F + ++ VV
Sbjct: 1 MGLASNVFVGSAVLNCYVKLSTLTDARRCFDD-----------------TRDPNVVSITN 43
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM-QMGDVSP 269
+I G+++ + + LF MP+RSVV+WN +I G++Q G +EA++ F DM + G V P
Sbjct: 44 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 103
Query: 270 NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV-LGSAVIDMYAKCGSVEKAIQV 328
N T + AIS + + GK +H A K + +V + +++I Y+KCG++E ++
Sbjct: 104 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 163
Query: 329 FEKIEN-KKNAITWSAIIGGLAMHGRANDALDYYRKM-QQAGVTPTDVVYIGLLSACSHA 386
F K+E ++N ++W+++I G A +GR +A+ + KM + + P +V +G+L AC+HA
Sbjct: 164 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 223
Query: 387 GLIEEGRSLFNHMVKVVGIEP---RVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVI 443
GLI+EG FN V +P +EHY CMVD + +MP+ P
Sbjct: 224 GLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGF 282
Query: 444 WKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKE 503
WKALLG C++H N ++ + A +++L P D SYV LSN +++ NW V +R KMKE
Sbjct: 283 WKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKE 342
Query: 504 MDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRI 548
+++ GCSWIE+ I F+ D+++ E+ ML +S +
Sbjct: 343 TGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHL 387
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 155/351 (44%), Gaps = 62/351 (17%)
Query: 63 RRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNR 122
+ + + A F M + +WN +I F++T ++ EA+ F M EG+V PN
Sbjct: 51 KHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNE-----EAVNTFVDMLREGVVIPNE 105
Query: 123 FTFPSVLKACAKMGRIQEGKEIHGFVVK-LGLDNDEFVASNLVRMYAMCGVMEDAYLLFS 181
TFP + A + + GK IH +K LG + FV ++L+ Y+ CG MED+ L F+
Sbjct: 106 STFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFN 165
Query: 182 NYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNV 241
KL +R +V WN MI W
Sbjct: 166 -----------KLEEEQRN----IVSWNSMI--------------------------W-- 182
Query: 242 MISGYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGALELG-----KWVHL 295
GYA NG +EA+ +F M + ++ PN +T++ VL A + G ++ G K V+
Sbjct: 183 ---GYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVND 239
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAN 355
Y + N +E++ + ++DM ++ G ++A ++ + + W A++GG +H +N
Sbjct: 240 YDDPNLLELEHY--ACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIH--SN 295
Query: 356 DALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIE 406
L + + P DV +LS A + SL +K G++
Sbjct: 296 KRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLK 346
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 207/419 (49%), Gaps = 26/419 (6%)
Query: 101 NPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVA 160
N +AL F QM S + + F LK+CA R G +H VK ++ FV
Sbjct: 27 NHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVG 86
Query: 161 SNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGD 220
L+ MY C + A LF RN V+WN MI + G
Sbjct: 87 CALLDMYGKCLSVSHARKLFDEIPQ----------RN-------AVVWNAMISHYTHCGK 129
Query: 221 IGASRKLFNKM---PQRSVVSWNVMISGY--AQNGFFKEAMDVFHDMQMGDVSPNYITLV 275
+ + +L+ M P S S+N +I G ++G ++ A++ + M PN ITL+
Sbjct: 130 VKEAVELYEAMDVMPNES--SFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLL 186
Query: 276 SVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK 335
+++ A S +GA L K +H YA +N IE L S +++ Y +CGS+ VF+ +E++
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 336 KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSL 395
+ + WS++I A+HG A AL +++M+ A VTP D+ ++ +L ACSHAGL +E
Sbjct: 247 -DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVY 305
Query: 396 FNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHG 455
F M G+ +HY C+VD + MP +P W ALLGAC+ +G
Sbjct: 306 FKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 456 NVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSW 514
+++ E AR L+ + P + +YV L I+ S G +RLKMKE V+ PG SW
Sbjct: 366 EIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 142/353 (40%), Gaps = 90/353 (25%)
Query: 34 QIHAHFIKTGLIGDPLAAAEIL----KFLSVSDRRDL----------------------- 66
+HAH +K+ + +P +L K LSVS R L
Sbjct: 69 SVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCG 128
Query: 67 --KYARKFFTQMN-NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRF 123
K A + + M+ PN S+N II+ T+D Y+ A+ F+ +M E +PN
Sbjct: 129 KVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYR----AIEFYRKMI-EFRFKPNLI 183
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
T +++ AC+ +G + KEIH + + ++ + S LV Y CG + L+F +
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDS- 242
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMI 243
M++ VV W+ +I + GD
Sbjct: 243 ----------------MEDRDVVAWSSLISAYALHGDA---------------------- 264
Query: 244 SGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNE-- 301
+ A+ F +M++ V+P+ I ++VL A S G L +Y ++ +
Sbjct: 265 ---------ESALKTFQEMELAKVTPDDIAFLNVLKACSHAG---LADEALVYFKRMQGD 312
Query: 302 --IEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHG 352
+ S ++D+ ++ G E+A +V + + K A TW A++G +G
Sbjct: 313 YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 218/443 (49%), Gaps = 55/443 (12%)
Query: 73 FTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
F M N FSWN II F+ + +++ F +M E V P+ FT P +L+AC
Sbjct: 71 FWHMPYRNIFSWNIIIGEFSRSGFAS-----KSIDLFLRMWRESCVRPDDFTLPLILRAC 125
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNST 192
+ + G IH +KLG + FV+S LV MY
Sbjct: 126 SASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY------------------------- 160
Query: 193 KLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFF 252
V +G + +RKLF+ MP R V + M GY Q G
Sbjct: 161 -----------------------VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEA 197
Query: 253 KEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAV 312
+ +F +M + + + +VS+L A +LGAL+ GK VH + + + LG+A+
Sbjct: 198 MLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAI 257
Query: 313 IDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPT 372
DMY KC ++ A VF + ++++ I+WS++I G + G + + +M + G+ P
Sbjct: 258 TDMYVKCSILDYAHTVFVNM-SRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPN 316
Query: 373 DVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXV 432
V ++G+LSAC+H GL+E+ L+ +++ I P ++HY + D +
Sbjct: 317 AVTFLGVLSACAHGGLVEKSW-LYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFL 375
Query: 433 LNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWV 492
+MP++PD+ + A+L CK++GNV++GERVAR L++L P + YV L+ ++++ G +
Sbjct: 376 EDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFD 435
Query: 493 GVVEVRLKMKEMDVRKDPGCSWI 515
+R MKE + K PGCS I
Sbjct: 436 EAESLRQWMKEKQISKVPGCSSI 458
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 159/560 (28%), Positives = 257/560 (45%), Gaps = 87/560 (15%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIG-DPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNC 81
+ RC ++Q KQ+HA + +P+ + L F R + Y ++ N +
Sbjct: 279 LQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDS 338
Query: 82 FSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKM------ 135
FSW ++R ++ ++ E + + M + G + P+ SVL+AC KM
Sbjct: 339 FSWGCLVRFLSQ-----HRKFKETVDVYIDMHNSG-IPPSSHAVTSVLRACGKMENMVDG 392
Query: 136 -----------------------------GRIQEGKE----------------IHGFVVK 150
G I+ K+ +HG++
Sbjct: 393 KPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLES 452
Query: 151 LGLDN----------DEFVASNLV-RMYAMCGVMEDAYLLFSNYV------------SHF 187
LD + V+ NL+ YA G M +A LFS +
Sbjct: 453 GELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV 512
Query: 188 DNNSTKLVRN--KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISG 245
+ KL R M + V W MI G+ +LGD+ ++ +LF M ++ + ++ MI+
Sbjct: 513 NCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC 572
Query: 246 YAQNGFFKEAMDVFHDM--QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIE 303
Y QNG K+A+ +F M + + P+ ITL SV+ A S+LG G WV Y ++ I+
Sbjct: 573 YTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIK 632
Query: 304 IDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRK 363
IDD+L +++ID+Y K G KA ++F + NKK+ +++SA+I G ++G A +A +
Sbjct: 633 IDDLLSTSLIDLYMKGGDFAKAFKMFSNL-NKKDTVSYSAMIMGCGINGMATEANSLFTA 691
Query: 364 MQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXX 423
M + + P V + GLLSA SH+GL++EG FN M K +EP +HYG MVD
Sbjct: 692 MIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAG 750
Query: 424 XXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSN 483
+ +MP++P+ +W ALL A +H NV+ GE +KL +G L+
Sbjct: 751 RLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAM 810
Query: 484 IFASRGNWVGVVEVRLKMKE 503
I++S G W VR +KE
Sbjct: 811 IYSSVGRWDDARTVRDSIKE 830
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/520 (28%), Positives = 242/520 (46%), Gaps = 64/520 (12%)
Query: 33 KQIHAHFIKTGLIGD-PLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAF 91
K IHA I + + D PL A + + S D R+ Y F +++NPN SWN+II
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYV---FGRIHNPNLVSWNSIISGC 376
Query: 92 AETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
+E + +A+ + ++ P+ +TF + + A A+ R GK +HG V KL
Sbjct: 377 SENGFGE-----QAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKL 431
Query: 152 GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVM 211
G + FV + L+ MY F N +
Sbjct: 432 GYERSVFVGTTLLSMY-------------------FKNREAE------------------ 454
Query: 212 IDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNY 271
+++K+F+ M +R VV W MI G+++ G + A+ F +M +
Sbjct: 455 -----------SAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDG 503
Query: 272 ITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK 331
+L SV+ A S + L G+ H A + + + A++DMY K G E A +F
Sbjct: 504 FSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSL 563
Query: 332 IENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEE 391
N + W++++G + HG AL ++ ++ + G P V Y+ LL+ACSH G +
Sbjct: 564 ASNP-DLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQ 622
Query: 392 GRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV-IWKALLGA 450
G+ L+N M K GI+ +HY CMV+ + P + +W+ LL A
Sbjct: 623 GKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSA 681
Query: 451 CKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDP 510
C N+++G A ++KL P D+ +++ LSN++A G W V E+R K++ + KDP
Sbjct: 682 CVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDP 741
Query: 511 GCSWIEI-DGVIHEFLVEDESHPRAKEIRSMLEEISNRIR 549
G SWIE+ + F D+S+P E+ S ++ NR++
Sbjct: 742 GLSWIEVNNNNTQVFSSGDQSNP---EVVSQAQDELNRLK 778
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 173/392 (44%), Gaps = 61/392 (15%)
Query: 17 SSLFPQIARCKSI---KQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDR-RDLKYARKF 72
SS+ +C SI K+ +QIHA + G + +S+ R L+ ARK
Sbjct: 95 SSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKV 154
Query: 73 FTQMNNPNCFSWNTIIRAFAETDD-DDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKA 131
F +M + N S+N + A++ D Y PL M E V+PN TF S+++
Sbjct: 155 FDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTT-----HMAFE-YVKPNSSTFTSLVQV 208
Query: 132 CAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNS 191
CA + + G ++ ++KLG ++ V ++++ MY+ C
Sbjct: 209 CAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSC--------------------- 247
Query: 192 TKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
GD+ ++R++F+ + R V+WN MI G +N
Sbjct: 248 ---------------------------GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDK 280
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
++ + F +M M V P T VL S+LG+ LGK +H ++ D L +A
Sbjct: 281 IEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNA 340
Query: 312 VIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT- 370
++DMY CG + +A VF +I N N ++W++II G + +G A+ YR++ +
Sbjct: 341 LLDMYCSCGDMREAFYVFGRIHN-PNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV 402
P + + +SA + G+ L + K+
Sbjct: 400 PDEYTFSAAISATAEPERFVHGKLLHGQVTKL 431
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVS---------WNVMISGYAQNGFFKEAMDVF 259
N +I +VR + +RK+F+KMPQR++V+ + M S + +
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 260 HDMQMGDVSPNYITLVSVLPAISRLGALELGKWVH---LYAEKNEIEIDDVLGSAVIDMY 316
M + +++ + + L +I+ L+ + +H L A + +I MY
Sbjct: 86 FFMPLNEIASSVVELTRKCVSIT---VLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGR-ANDALDYYRKMQQAGVTPTDVV 375
+CGS+E+A +VF+K+ + +N ++++A+ + + A+ A M V P
Sbjct: 143 VRCGSLEQARKVFDKMPH-RNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 376 YIGLLSACSHAGLIEEGRSLFNHMVKV 402
+ L+ C+ + G SL + ++K+
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKL 228
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 250/504 (49%), Gaps = 30/504 (5%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+Q+H + K G + + + +++F SD L+ A K F +M +P+ SWN+++ +
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSD--SLEDAHKVFDEMPDPDVISWNSLVSGYV 132
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
++ E + F ++ V PN F+F + L ACA++ G IH +VKLG
Sbjct: 133 QSGRFQ-----EGICLFLEL-HRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLG 186
Query: 153 LDNDEFVASN-LVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLV-----RNKRMQEGV-- 204
L+ V N L+ MY CG M+DA L+F ++ D S + RN +++ G+
Sbjct: 187 LEKGNVVVGNCLIDMYGKCGFMDDAVLVF-QHMEEKDTVSWNAIVASCSRNGKLELGLWF 245
Query: 205 --------VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAM 256
V +N +ID FV+ GD + ++ + MP + SWN +++GY + EA
Sbjct: 246 FHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEAT 305
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
+ F M V + +L VL A++ L + G +H A K ++ V+ SA+IDMY
Sbjct: 306 EFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMY 365
Query: 317 AKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG-VTPTDVV 375
+KCG ++ A +F + +KN I W+ +I G A +G + +A+ + +++Q + P
Sbjct: 366 SKCGMLKHAELMFWTMP-RKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFT 424
Query: 376 YIGLLSACSHAGL-IEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLN 434
++ LL+ CSH + +E F M+ I+P VEH ++ +
Sbjct: 425 FLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQE 484
Query: 435 MPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGS--YVALSNIFASRGNWV 492
D V W+ALLGAC ++K + VA +++L D Y+ +SN++A W
Sbjct: 485 FGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWR 544
Query: 493 GVVEVRLKMKEMDVRKDPGCSWIE 516
V ++R M+E V K+ G SWI+
Sbjct: 545 EVGQIRKIMRESGVLKEVGSSWID 568
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%), Gaps = 61/306 (19%)
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
SW+TI+ A A + L ++ ++G +P+ +L+ G + +
Sbjct: 23 SWSTIVPALARF------GSIGVLRAAVELINDG-EKPDASPLVHLLRVSGNYGYVSLCR 75
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQE 202
++HG+V K G ++ ++++L+R Y +EDA+ +F M +
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFD-----------------EMPD 118
Query: 203 GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM 262
V+ WN + +SGY Q+G F+E + +F ++
Sbjct: 119 PDVISWNSL-------------------------------VSGYVQSGRFQEGICLFLEL 147
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD-VLGSAVIDMYAKCGS 321
DV PN + + L A +RL LG +H K +E + V+G+ +IDMY KCG
Sbjct: 148 HRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGF 207
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
++ A+ VF+ +E +K+ ++W+AI+ + +G+ L ++ +M P V Y L+
Sbjct: 208 MDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTYNELID 262
Query: 382 ACSHAG 387
A +G
Sbjct: 263 AFVKSG 268
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 209/420 (49%), Gaps = 32/420 (7%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+QIH IK G + ++ F + +L+ +R F + + N WN ++ +A
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCG--NLEDSRLCFDYIRDKNIVCWNALLSGYA 393
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
D P+ L F QM G P +TF + LK+C + E +++H +V++G
Sbjct: 394 NKD-----GPI-CLSLFLQMLQMGF-RPTEYTFSTALKSCC----VTELQQLHSVIVRMG 442
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
+++++V S+L+R YA +M DA LL + + T VV N++
Sbjct: 443 YEDNDYVLSSLMRSYAKNQLMNDALLLLD-----WASGPTS-----------VVPLNIVA 486
Query: 213 DGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
+ R G S KL + + Q VSWN+ I+ +++ + +E +++F M ++ P+
Sbjct: 487 GIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKY 546
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEI-DDVLGSAVIDMYAKCGSVEKAIQVFEK 331
T VS+L S+L L LG +H K + D + + +IDMY KCGS+ ++VFE+
Sbjct: 547 TFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEE 606
Query: 332 IENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEE 391
+KN ITW+A+I L +HG +AL+ +++ G P V +I +L+AC H G+++E
Sbjct: 607 TR-EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKE 665
Query: 392 GRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGAC 451
G LF M K G+EP ++HY C VD + MP D +W+ L C
Sbjct: 666 GMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 166/373 (44%), Gaps = 64/373 (17%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
++ A K F QM N S+NTII+ +++ D D +A G F +M G + PN+ T
Sbjct: 64 EVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVD-----KAWGVFSEMRYFGYL-PNQST 117
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGL-DNDEFVASNLVRMYAMC------------- 170
+L +CA + ++ G ++HG +K GL D FV + L+ +Y
Sbjct: 118 VSGLL-SCASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM 175
Query: 171 ------------------GVMEDAYLLFSNYV--------SHF-----------DNNSTK 193
G +++ F V S F D + +K
Sbjct: 176 PFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISK 235
Query: 194 LVRNKRMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNG 250
+ ++G+ + + N +I + + G+ + ++F +VSWN +I A++
Sbjct: 236 QLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSE 295
Query: 251 FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGS 310
+A+ +F M SPN T VSVL S + L G+ +H KN E VLG+
Sbjct: 296 NPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGN 355
Query: 311 AVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
A+ID YAKCG++E + F+ I + KN + W+A++ G A + L + +M Q G
Sbjct: 356 ALIDFYAKCGNLEDSRLCFDYIRD-KNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFR 413
Query: 371 PTDVVYIGLLSAC 383
PT+ + L +C
Sbjct: 414 PTEYTFSTALKSC 426
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 166/377 (44%), Gaps = 44/377 (11%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
KQ+H K GL + ++ + + A + F + + SWN II A A
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLIS--AYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+++ NPL+AL F M G PN+ T+ SVL + + + G++IHG ++K G
Sbjct: 293 KSE-----NPLKALKLFVSMPEHGF-SPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
+ + + L+ YA CG +ED+ L F +R+K +V WN ++
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFD------------YIRDKN-----IVCWNALL 389
Query: 213 DGFV-RLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHD--MQMGDVSP 269
G+ + G I S LF +M Q S ++ E + H ++MG
Sbjct: 390 SGYANKDGPICLS--LFLQMLQMGFRPTEYTFSTALKSCCVTE-LQQLHSVIVRMGYEDN 446
Query: 270 NYITLVSVLPAISR----LGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKA 325
+Y+ L S++ + ++ AL L W + + ++ V G +Y++ G ++
Sbjct: 447 DYV-LSSLMRSYAKNQLMNDALLLLDWAS--GPTSVVPLNIVAG-----IYSRRGQYHES 498
Query: 326 IQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSH 385
+++ +E + + ++W+ I + + ++ ++ M Q+ + P ++ +LS CS
Sbjct: 499 VKLISTLE-QPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSK 557
Query: 386 AGLIEEGRSLFNHMVKV 402
+ G S+ + K
Sbjct: 558 LCDLTLGSSIHGLITKT 574
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 99/181 (54%), Gaps = 4/181 (2%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
V + N +I + +LG++ + K+F++MP+R+ VS+N +I GY++ G +A VF +M+
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV-LGSAVIDMYAKCGSVE 323
PN T+ +L S + G +H + K + + D +G+ ++ +Y + +E
Sbjct: 109 FGYLPNQSTVSGLLSCASL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC 383
A QVFE + K+ TW+ ++ L G + + ++R++ + G + T+ ++G+L
Sbjct: 167 MAEQVFEDMP-FKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGV 225
Query: 384 S 384
S
Sbjct: 226 S 226
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 244/496 (49%), Gaps = 66/496 (13%)
Query: 9 TATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKY 68
+ T P +SL ++I ++H H I L+ + L + L L S +
Sbjct: 88 SLTEPEIFASLLETCYSLRAIDHGVRVH-HLIPPYLLRNNLGISSKLVRLYASCGY-AEV 145
Query: 69 ARKFFTQMN--NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFP 126
A + F +M+ + + F+WN++I +AE + +A+ + QM +G V+P+RFTFP
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYE-----DAMALYFQMAEDG-VKPDRFTFP 199
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
VLKAC +G +Q G+ IH +VK G D +V
Sbjct: 200 RVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYV--------------------------- 232
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGY 246
N ++ + + GDI +R +F+ +P + VSWN M++GY
Sbjct: 233 ---------------------LNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGY 271
Query: 247 AQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD 306
+G EA+D+F M + P+ + + SVL +R+ + + G+ +H + + +E +
Sbjct: 272 LHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWEL 328
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQ 366
+ +A+I +Y+K G + +A +F+++ +++ ++W+AII + H + ++ L Y+ +M +
Sbjct: 329 SVANALIVLYSKRGQLGQACFIFDQML-ERDTVSWNAII---SAHSKNSNGLKYFEQMHR 384
Query: 367 AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXX 426
A P + ++ +LS C++ G++E+G LF+ M K GI+P++EHY CMV+
Sbjct: 385 ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 427 XXXXXVLN-MPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIF 485
++ M + +W ALL AC +HGN +GE A+ L +L P + ++ L I+
Sbjct: 445 EAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIY 504
Query: 486 ASRGNWVGVVEVRLKM 501
+ V VR M
Sbjct: 505 SKAKRAEDVERVRQMM 520
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 213/462 (46%), Gaps = 58/462 (12%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
D A F QM N SW +I +N + F M E L PNR T
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVAN-----QNYEMGVDLFRAMQRENL-RPNRVT 253
Query: 125 FPSVLKACAKMGRIQE-GKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
SVL AC ++ KEIHGF + G DE + + + MY
Sbjct: 254 LLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC--------------- 298
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMI 243
R G++ SR LF R VV W+ MI
Sbjct: 299 ---------------------------------RCGNVSLSRVLFETSKVRDVVMWSSMI 325
Query: 244 SGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIE 303
SGYA+ G E M++ + M+ + N +TL++++ A + L VH K
Sbjct: 326 SGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFM 385
Query: 304 IDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRK 363
+LG+A+IDMYAKCGS+ A +VF ++ +K+ ++WS++I +HG ++AL+ ++
Sbjct: 386 SHILLGNALIDMYAKCGSLSAAREVFYEL-TEKDLVSWSSMINAYGLHGHGSEALEIFKG 444
Query: 364 MQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXX 423
M + G D+ ++ +LSAC+HAGL+EE +++F K + +EHY C ++
Sbjct: 445 MIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFG 503
Query: 424 XXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKM-GERVARTLMKLFPHDSGSYVALS 482
+NMP++P IW +LL AC+ HG + + G+ +A LMK P + +YV LS
Sbjct: 504 KIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLS 563
Query: 483 NIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEF 524
I GN+ EVR M+ + K G S IE + I ++
Sbjct: 564 KIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 187/409 (45%), Gaps = 64/409 (15%)
Query: 121 NRFT--FPSVLKACA-KMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMY---------- 167
N FT PSV+KACA + G ++H +K G D D V+++L+ MY
Sbjct: 43 NGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVR 102
Query: 168 ------------AMCGVM----EDAYLL----------FSNYVSHFD------------N 189
+ C ++ +D L F ++ +
Sbjct: 103 KVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMG 162
Query: 190 NSTKLVR--------NKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNV 241
+S+K+ R ++RMQE V+ L ++D +++ D A+ +F++M ++ VSW
Sbjct: 163 SSSKVARMFHALVLVDERMQESVL-LSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTA 221
Query: 242 MISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLG-ALELGKWVHLYAEKN 300
MISG N ++ +D+F MQ ++ PN +TL+SVLPA L L K +H ++ ++
Sbjct: 222 MISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRH 281
Query: 301 EIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDY 360
D+ L +A + MY +CG+V + +FE ++ + WS++I G A G ++ ++
Sbjct: 282 GCHADERLTAAFMTMYCRCGNVSLSRVLFET-SKVRDVVMWSSMISGYAETGDCSEVMNL 340
Query: 361 YRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXX 420
+M++ G+ V + ++SAC+++ L+ ++ + ++K G + ++D
Sbjct: 341 LNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILK-CGFMSHILLGNALIDMYA 399
Query: 421 XXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMK 469
+ D V W +++ A +HG+ + + ++K
Sbjct: 400 KCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHGHGSEALEIFKGMIK 447
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 136/328 (41%), Gaps = 60/328 (18%)
Query: 32 LKQIHAHFIKTGLIGDP-LAAAEILKFLSVSDR-RDLKYARKFFTQMNNPNCFSWNTIIR 89
+K+IH + G D L AA F+++ R ++ +R F + W+++I
Sbjct: 271 VKEIHGFSFRHGCHADERLTAA----FMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMIS 326
Query: 90 AFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVV 149
+AET D E + QM EG +E N T +++ AC + +H ++
Sbjct: 327 GYAETGDCS-----EVMNLLNQMRKEG-IEANSVTLLAIVSACTNSTLLSFASTVHSQIL 380
Query: 150 KLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWN 209
K G + + + L+ MYA CG
Sbjct: 381 KCGFMSHILLGNALIDMYAKCG-------------------------------------- 402
Query: 210 VMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSP 269
+ A+R++F ++ ++ +VSW+ MI+ Y +G EA+++F M G
Sbjct: 403 ----------SLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV 452
Query: 270 NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF 329
+ + +++L A + G +E + + A K + + + I++ + G ++ A +V
Sbjct: 453 DDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVT 512
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDA 357
+ K +A WS+++ HGR + A
Sbjct: 513 INMPMKPSARIWSSLLSACETHGRLDVA 540
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 243 ISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALE-----LGKWVHLYA 297
+ G + F+ EA+ ++ +++ + N T ++LP++ + A + LG +H
Sbjct: 17 LKGLVSDQFYDEALRLY-KLKIHSLGTNGFT--AILPSVIKACAFQQEPFLLGAQLHCLC 73
Query: 298 EKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDA 357
K + D V+ +++I MYAK +VF+++ + ++ +++ +II G +A
Sbjct: 74 LKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLH-RDTVSYCSIINSCCQDGLLYEA 132
Query: 358 LDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV-VGIEPRVEHYGCMV 416
+ ++M G P + LL+ C+ G + +F+ +V V ++ V +V
Sbjct: 133 MKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALV 192
Query: 417 DXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMK 469
D M ++ ++V W A++ C + N +MG + R + +
Sbjct: 193 DMYLKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVANQNYEMGVDLFRAMQR 244
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 239/513 (46%), Gaps = 70/513 (13%)
Query: 12 RPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARK 71
RPT + + C Q+H IKTG L + + S D A K
Sbjct: 288 RPTDLT-FVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYS--SFEDFGAAHK 344
Query: 72 FFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKA 131
F + + +WNT+I ++ + K A+ + +M G V+P+ FTF S+L
Sbjct: 345 VFESLEEKDLVTWNTMISSYNQA-----KLGKSAMSVYKRMHIIG-VKPDEFTFGSLL-- 396
Query: 132 CAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNS 191
L LD E V + +++ + + +E
Sbjct: 397 ----------------ATSLDLDVLEMVQACIIK-FGLSSKIE----------------- 422
Query: 192 TKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
+ N +I + + G I + LF + +++++SWN +ISG+ NGF
Sbjct: 423 ---------------ISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGF 467
Query: 252 FKEAMDVFHDMQMGDVS--PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG 309
E ++ F + +V P+ TL ++L +L LG H Y ++ + ++G
Sbjct: 468 PFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIG 527
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG- 368
+A+I+MY++CG+++ +++VF ++ ++K+ ++W+++I + HG +A++ Y+ MQ G
Sbjct: 528 NALINMYSQCGTIQNSLEVFNQM-SEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGK 586
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXX 428
V P + +LSACSHAGL+EEG +FN MV+ G+ V+H+ C+VD
Sbjct: 587 VIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEA 646
Query: 429 XXXVL----NMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNI 484
V + R D +W AL AC HG++K+G+ VA+ LM+ D YV LSNI
Sbjct: 647 ESLVKISEKTIGSRVD--VWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNI 704
Query: 485 FASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEI 517
+A G W E R + + K GCSW+ +
Sbjct: 705 YAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 126/553 (22%), Positives = 224/553 (40%), Gaps = 102/553 (18%)
Query: 34 QIHAHFIKTGLIGDPLAAAEILKFLSVSDRR-DLKYARKFFTQMNNPNCFSWNTIIRAFA 92
Q+H + I++GL+ + +L S+ +R +L +K F +++ P+ +SW T++ A
Sbjct: 78 QVHCYAIRSGLLCHSHVSNTLL---SLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASF 134
Query: 93 ETDDDDYKNPL---------------------------EALGFFGQMCSEGLVEPNRFTF 125
+ D +Y + ++ F +M G V ++F F
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLG-VRHDKFGF 193
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS---- 181
++L C G + GK++H V+K G V + L+ MY C V+ DA L+F
Sbjct: 194 ATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDV 252
Query: 182 ------------NYVSHFDNNSTKLVRNKRMQ---------------------------- 201
+ ++ F + + LV K ++
Sbjct: 253 AVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHG 312
Query: 202 -------EGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKE 254
E ++ N + + D GA+ K+F + ++ +V+WN MIS Y Q K
Sbjct: 313 LAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKS 372
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL-YAEKNEIEIDDVLGSAVI 313
AM V+ M + V P+ T S+L L LE+ + + + ++IEI + A+I
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISN----ALI 428
Query: 314 DMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV--TP 371
Y+K G +EKA +FE+ +KN I+W+AII G +G + L+ + + ++ V P
Sbjct: 429 SAYSKNGQIEKADLLFER-SLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILP 487
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXX 431
LLS C + G ++++ + + G +
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETL--IGNALINMYSQCGTIQNSLE 545
Query: 432 VLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFA---SR 488
V N D V W +L+ A HG GE T + D G + + F+ S
Sbjct: 546 VFNQMSEKDVVSWNSLISAYSRHGE---GENAVNTYKTM--QDEGKVIPDAATFSAVLSA 600
Query: 489 GNWVGVVEVRLKM 501
+ G+VE L++
Sbjct: 601 CSHAGLVEEGLEI 613
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 150/310 (48%), Gaps = 29/310 (9%)
Query: 105 ALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLV 164
AL F + + P++++ + + G ++H + ++ GL V++ L+
Sbjct: 40 ALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLL 99
Query: 165 RMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGAS 224
+Y G + ++ FD + E V W ++ +LGDI +
Sbjct: 100 SLYERLGNL-------ASLKKKFD----------EIDEPDVYSWTTLLSASFKLGDIEYA 142
Query: 225 RKLFNKMPQRSVVS-WNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISR 283
++F+KMP+R V+ WN MI+G ++G+ + ++++F +M V + ++L ++
Sbjct: 143 FEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCD 201
Query: 284 LGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK-KNAITWS 342
G+L+ GK VH K I + +A+I MY C V A VFE+ + ++ +T++
Sbjct: 202 YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFN 261
Query: 343 AIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKV 402
+I GLA R +++L +RKM +A + PTD+ ++ ++ +CS A + H V
Sbjct: 262 VVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM--------GHQVHG 312
Query: 403 VGIEPRVEHY 412
+ I+ E Y
Sbjct: 313 LAIKTGYEKY 322
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 253/536 (47%), Gaps = 63/536 (11%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+++H+ K+ L DP A ++ +F +++D DL ARK F + F WN+IIRA+A
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALND--DLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+ L F Q+ P+ FT+ + + ++ + + IHG + G
Sbjct: 83 KAHQFT-----TVLSLFSQILRSD-TRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSG 136
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSN------------------------------ 182
L D+ S +V+ Y+ G++ +A LF +
Sbjct: 137 LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFN 196
Query: 183 ---YVSHFDNNSTKLVRNKRMQEGVVVL--WNV------------------MIDGFVRLG 219
+ H N T + + + ++L W+V +++ + R
Sbjct: 197 LMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCM 256
Query: 220 DIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
I ++ +FN + + +V+ + +I+GY++ G KEA+ +F +++M P+ + + VL
Sbjct: 257 CIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLG 316
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAI 339
+ + L GK VH Y + +E+D + SA+IDMY+KCG ++ A+ +F I +KN +
Sbjct: 317 SCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIV 375
Query: 340 TWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
+++++I GL +HG A+ A + + ++ + G+ P ++ + LL C H+GL+ +G+ +F M
Sbjct: 376 SFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERM 435
Query: 400 VKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKM 459
GIEP+ EHY MV V+++ D I ALL C++H N +
Sbjct: 436 KSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHL 495
Query: 460 GERVARTLMKLFPHDSGSY-VALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSW 514
E VA + K Y V LSN++A G W V +R + E K PG SW
Sbjct: 496 AEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 234/496 (47%), Gaps = 29/496 (5%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCF 82
+ C I+ Q+H +K+G + ++ S L A + F ++ + +
Sbjct: 139 LGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVL--AARMFEKVPHKSVV 196
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
++N I E + N + ++ F M EPN TF + + ACA + +Q G+
Sbjct: 197 TYNAFISGLME---NGVMNLVPSV--FNLMRKFSSEEPNDVTFVNAITACASLLNLQYGR 251
Query: 143 EIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQE 202
++HG V+K + V + L+ MY+ C + AY++F+ K RN
Sbjct: 252 QLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTEL---------KDTRN----- 297
Query: 203 GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAMDV 258
++ WN +I G + G + +LF K+ + +WN +ISG++Q G EA
Sbjct: 298 --LISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKF 355
Query: 259 FHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAK 318
F M + P+ L S+L A S + L+ GK +H + K E D + +++IDMY K
Sbjct: 356 FERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMK 415
Query: 319 CGSVEKAIQVFEKIENK-KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYI 377
CG A ++F++ E K K+ + W+ +I G HG A++ + +++ V P+ +
Sbjct: 416 CGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFT 475
Query: 378 GLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPI 437
+LSACSH G +E+G +F M + G +P EH GCM+D + M
Sbjct: 476 AVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSE 535
Query: 438 RPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEV 497
V +LLG+C+ H + +GE A L +L P + +V LS+I+A+ W V +
Sbjct: 536 PSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESI 594
Query: 498 RLKMKEMDVRKDPGCS 513
R + + + K PG S
Sbjct: 595 RQVIDQKQLVKLPGLS 610
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 138/283 (48%), Gaps = 53/283 (18%)
Query: 120 PNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL 179
PN+FTFP +LK+CAK+G + +G+ +H VVK G D F A+ LV MY + DA
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDAL-- 86
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSW 239
K+ ++MP+R + S
Sbjct: 87 ----------------------------------------------KVLDEMPERGIASV 100
Query: 240 NVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEK 299
N +SG +NGF ++A +F D ++ N +T+ SVL G +E G +H A K
Sbjct: 101 NAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMK 157
Query: 300 NEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALD 359
+ E++ +G++++ MY++CG A ++FEK+ + K+ +T++A I GL +G N
Sbjct: 158 SGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPH-KSVVTYNAFISGLMENGVMNLVPS 216
Query: 360 YYRKMQQ-AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+ M++ + P DV ++ ++AC+ ++ GR L ++K
Sbjct: 217 VFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 222/452 (49%), Gaps = 20/452 (4%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
AR+ F +M+ + SWN II + + EA +M G VE + T+ ++
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLG-----EAFKLLDRMYLSG-VEASIVTWNTI 291
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD 188
C ++ G I +G+ N ++ + + L + V H
Sbjct: 292 AGGC-----LEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK-VFH-- 343
Query: 189 NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
++R+ + + N +I + R D+ + +F ++ S+ +WN +ISG+A
Sbjct: 344 ---CLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD-V 307
N +E + +M + PN+ITL S+LP +R+G L+ GK H Y + + D +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 308 LGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQA 367
L ++++DMYAK G + A +VF+ + K++ +T++++I G G+ AL +++ M ++
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 368 GVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXX 427
G+ P V + +LSACSH+ L+ EG LF M V GI R+EHY CMVD
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 428 XXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVA-RTLMKLFPHDSGSYVALSNIFA 486
+P P + LL AC +HGN +GE A + L++ P G Y+ L++++A
Sbjct: 580 ARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYA 639
Query: 487 SRGNWVGVVEVRLKMKEMDVRKDPGCSWIEID 518
G+W +V V+ + ++ V+K + +E D
Sbjct: 640 VTGSWSKLVTVKTLLSDLGVQKAHEFALMETD 671
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 181/376 (48%), Gaps = 34/376 (9%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+Q+HAH I +GL D + +++ F S + D +++ +P WN +I ++
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP--LPWNVLIGSYI 160
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
K E++ + +M S+G + + FT+PSV+KACA + G+ +HG +
Sbjct: 161 RN-----KRFQESVSVYKRMMSKG-IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
+ +V + L+ MY G ++ A LF RM E V WN +I
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLF-----------------DRMSERDAVSWNAII 257
Query: 213 DGFVRLGDIGASRKLFNKM----PQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
+ + +G + KL ++M + S+V+WN + G + G + A++ M+ +V
Sbjct: 258 NCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVR 317
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKN---EIEIDDVLGSAVIDMYAKCGSVEKA 325
+ +++ L A S +GAL+ GK H ++ +ID+V S +I MY++C + A
Sbjct: 318 IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS-LITMYSRCSDLRHA 376
Query: 326 IQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSH 385
VF+++E + TW++II G A + R+ + ++M +G P + +L +
Sbjct: 377 FIVFQQVE-ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 386 AGLIEEGRSLFNHMVK 401
G ++ G+ ++++
Sbjct: 436 VGNLQHGKEFHCYILR 451
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 222/452 (49%), Gaps = 20/452 (4%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
AR+ F +M+ + SWN II + + EA +M G VE + T+ ++
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLG-----EAFKLLDRMYLSG-VEASIVTWNTI 291
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD 188
C ++ G I +G+ N ++ + + L + V H
Sbjct: 292 AGGC-----LEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK-VFH-- 343
Query: 189 NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
++R+ + + N +I + R D+ + +F ++ S+ +WN +ISG+A
Sbjct: 344 ---CLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD-V 307
N +E + +M + PN+ITL S+LP +R+G L+ GK H Y + + D +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 308 LGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQA 367
L ++++DMYAK G + A +VF+ + K++ +T++++I G G+ AL +++ M ++
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 368 GVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXX 427
G+ P V + +LSACSH+ L+ EG LF M V GI R+EHY CMVD
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 428 XXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVA-RTLMKLFPHDSGSYVALSNIFA 486
+P P + LL AC +HGN +GE A + L++ P G Y+ L++++A
Sbjct: 580 ARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYA 639
Query: 487 SRGNWVGVVEVRLKMKEMDVRKDPGCSWIEID 518
G+W +V V+ + ++ V+K + +E D
Sbjct: 640 VTGSWSKLVTVKTLLSDLGVQKAHEFALMETD 671
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 181/376 (48%), Gaps = 34/376 (9%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+Q+HAH I +GL D + +++ F S + D +++ +P WN +I ++
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP--LPWNVLIGSYI 160
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
K E++ + +M S+G + + FT+PSV+KACA + G+ +HG +
Sbjct: 161 RN-----KRFQESVSVYKRMMSKG-IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
+ +V + L+ MY G ++ A LF RM E V WN +I
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLF-----------------DRMSERDAVSWNAII 257
Query: 213 DGFVRLGDIGASRKLFNKM----PQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
+ + +G + KL ++M + S+V+WN + G + G + A++ M+ +V
Sbjct: 258 NCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVR 317
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKN---EIEIDDVLGSAVIDMYAKCGSVEKA 325
+ +++ L A S +GAL+ GK H ++ +ID+V S +I MY++C + A
Sbjct: 318 IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS-LITMYSRCSDLRHA 376
Query: 326 IQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSH 385
VF+++E + TW++II G A + R+ + ++M +G P + +L +
Sbjct: 377 FIVFQQVE-ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 386 AGLIEEGRSLFNHMVK 401
G ++ G+ ++++
Sbjct: 436 VGNLQHGKEFHCYILR 451
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 252/545 (46%), Gaps = 59/545 (10%)
Query: 24 ARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFS 83
A + +KQ H +K G+ ++L+ + + R+ A K F +M N +
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQ--AYTKIREFDDADKLFDEMPLRNIVT 104
Query: 84 WNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKE 143
WN +I + D D + ++ V + +F +++ C ++ G +
Sbjct: 105 WNILIHGVIQRDGDTNHRAHLGFCYLSRILFTD-VSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 144 IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF---------------SNYVSH-- 186
+H +VK GL++ F +++LV Y CG++ +A +F S+YV +
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 187 ------------FDNNS--------TKLVRNKRMQEGV---VVLWNV-----------MI 212
D N + L+ R+++G +L+ V ++
Sbjct: 224 IDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALL 283
Query: 213 DGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
+ + + + +R+ F M R+VVSWN MI G+AQNG +EAM +F M + ++ P+ +
Sbjct: 284 NMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDEL 343
Query: 273 TLVSVLPAISRLGAL-ELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK 331
T SVL + ++ A+ E+ + + +K + V +++I Y++ G++ +A+ F
Sbjct: 344 TFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSV-ANSLISSYSRNGNLSEALLCFHS 402
Query: 332 IENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEE 391
I + + ++W+++IG LA HG A ++L + M Q + P + ++ +LSACSH GL++E
Sbjct: 403 IR-EPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQE 460
Query: 392 GRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGAC 451
G F M + IE EHY C++D + +MP P A G C
Sbjct: 461 GLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGC 520
Query: 452 KMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVR-KDP 510
+H + + A+ L+++ P +Y LSN + S G+W +R + + K P
Sbjct: 521 NIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTP 580
Query: 511 GCSWI 515
GCSW+
Sbjct: 581 GCSWL 585
>AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G32450.1); Has 7881 Blast hits to 3723
proteins in 97 species: Archae - 0; Bacteria - 6;
Metazoa - 6; Fungi - 16; Plants - 7829; Viruses - 0;
Other Eukaryotes - 24 (source: NCBI BLink). |
chr2:10888102-10889949 FORWARD
Length = 615
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 194/389 (49%), Gaps = 30/389 (7%)
Query: 267 VSPNYITLVSVLPAISRL----GALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
S NY+ +S L ++++ L+ K VH + +D +++MY+ CG
Sbjct: 246 ASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLA 305
Query: 323 EKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
+A VFEK+ ++KN TW II A +G DA+D + + ++ G P ++ G+ A
Sbjct: 306 NEAASVFEKM-SEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYA 364
Query: 383 CSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV 442
C G ++EG F M + GI P +E Y +V+ V MP+ P+
Sbjct: 365 CGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVD 424
Query: 443 IWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMK 502
+W+ L+ ++HGN+++G+ A + L P SR ++ V K
Sbjct: 425 VWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNK--------QSREGFIPV-------K 469
Query: 503 EMDVRKDPGCSWIEIDGVIH-------EFLVEDESHPRAKEIRSMLEEISNRIRSAGYRP 555
DV K+ S + G++H EF D + P E+ +L + + GY
Sbjct: 470 ASDVEKE---SLKKRSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVA 526
Query: 556 NITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLIS 615
L ++D+E KE+ L HSERIA A ++++ P+ P ++KNLRVC DCH+++K++S
Sbjct: 527 ETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMS 586
Query: 616 EIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+I R++I RD KRFH + G C+C DYW
Sbjct: 587 DIVGREVITRDIKRFHQMKNGACTCKDYW 615
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 195/353 (55%), Gaps = 29/353 (8%)
Query: 64 RDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRF 123
+DL+ ARK+F +M + SWN ++ +A+ + +AL F M G V PN
Sbjct: 212 KDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTE-----DALRLFNDMLRLG-VRPNET 265
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
T+ V+ AC+ + + + + + + FV + L+ M+A C ++ A +F
Sbjct: 266 TWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIF--- 322
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMI 243
N RN +V WN MI G+ R+GD+ ++R+LF+ MP+R+VVSWN +I
Sbjct: 323 ------NELGTQRN-------LVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLI 369
Query: 244 SGYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEI 302
+GYA NG A++ F DM GD P+ +T++SVL A + LELG + Y KN+I
Sbjct: 370 AGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQI 429
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYR 362
+++D ++I MYA+ G++ +A +VF++++ +++ ++++ + A +G + L+
Sbjct: 430 KLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANGDGVETLNLLS 488
Query: 363 KMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCM 415
KM+ G+ P V Y +L+AC+ AGL++EG+ +F + P +HY CM
Sbjct: 489 KMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM 536
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 230/505 (45%), Gaps = 64/505 (12%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
SL ++ + QL QIHA I + A + R Y R F +
Sbjct: 8 SLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVT 67
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
PN F N++ + F++ D + + L + Q G++ P+ F+FP V+K+ + G
Sbjct: 68 FPNVFVVNSMFKYFSKMDMAN-----DVLRLYEQRSRCGIM-PDAFSFPVVIKSAGRFGI 121
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVR- 196
+ V KLG D +V + ++ MY +E A +F ++ ++
Sbjct: 122 L-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 197 -----NKR--------MQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMI 243
NK M E VV W VMI GF ++ D+ +RK F++MP++SVVSWN M+
Sbjct: 177 YWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAML 236
Query: 244 SGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIE 303
SGYAQNGF ++A+ +F+DM V PN T V V+ A S L + + ++ +
Sbjct: 237 SGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVR 296
Query: 304 IDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRK 363
++ + +A++DM+AKC ++ A ++F ++ ++N +TW+A+I G G + A +
Sbjct: 297 LNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDT 356
Query: 364 MQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXX 423
M + V V + L++ +H G F M+ YG
Sbjct: 357 MPKRNV----VSWNSLIAGYAHNGQAALAIEFFEDMI----------DYG---------- 392
Query: 424 XXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMK--LFPHDSGSYVAL 481
+PD+V ++L AC ++++G+ + + K + +DSG Y +L
Sbjct: 393 ------------DSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSG-YRSL 439
Query: 482 SNIFASRGNWVGVVEVRLKMKEMDV 506
++A GN V +MKE DV
Sbjct: 440 IFMYARGGNLWEAKRVFDEMKERDV 464
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 194/403 (48%), Gaps = 46/403 (11%)
Query: 248 QNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV 307
Q +K+A+++ M P+ V + + + L +LE K VH + +++ D
Sbjct: 217 QRRLYKDAIELLDKGAM----PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPK 272
Query: 308 LGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQA 367
L + VI M+ +C S+ A +VF+ + +K + +W ++ + +G +DAL + +M +
Sbjct: 273 LNNMVISMFGECSSITDAKRVFDHMVDK-DMDSWHLMMCAYSDNGMGDDALHLFEEMTKH 331
Query: 368 GVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXX 427
G+ P + ++ + AC+ G IEE F+ M GI P+ EHY ++
Sbjct: 332 GLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVE 391
Query: 428 XXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFAS 487
+ ++P P W+A+ ++HG++ + + + ++ + P S ++ I
Sbjct: 392 AEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP----SKAVINKIPTP 447
Query: 488 ------RGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSML 541
N V L+ + + KD GV+
Sbjct: 448 PPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVV-------------------- 487
Query: 542 EEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNL 601
Y P+ VL ++D+E KE AL YHSER+AIA+G+I T P+ L I+KNL
Sbjct: 488 -----------YVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNL 536
Query: 602 RVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
RVC DCH+ IK++S+I R +IVRD KRFHHF+ G CSC DYW
Sbjct: 537 RVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 203 GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM 262
G L N++I F I ++++F+ M + + SW++M+ Y+ NG +A+ +F +M
Sbjct: 269 GDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI----DDVLGSAVIDMYAK 318
+ PN T ++V A + +G +E ++H + KNE I + LG V+ + K
Sbjct: 329 TKHGLKPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTEHYLG--VLGVLGK 385
Query: 319 CGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVV 375
CG + +A Q + + A W A+ +HG D DY ++ V P+ V
Sbjct: 386 CGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDI-DLEDYMEEL-MVDVDPSKAV 440
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 26/222 (11%)
Query: 19 LFPQIARCKSIKQLKQIHAHFIKTGLIGDP-LAAAEILKFLSVSDRRDLKYARKFFTQMN 77
LF A KS++ K++H HF+++ GDP L I F S D A++ F M
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITD---AKRVFDHMV 298
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
+ + SW+ ++ A+++ D +AL F +M GL +PN TF +V ACA +G
Sbjct: 299 DKDMDSWHLMMCAYSDNGMGD-----DALHLFEEMTKHGL-KPNEETFLTVFLACATVGG 352
Query: 138 IQEG-------KEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNN 190
I+E K HG K + ++ ++ + CG + +A + +
Sbjct: 353 IEEAFLHFDSMKNEHGISPK----TEHYLG--VLGVLGKCGHLVEAEQYIRDLPFEPTAD 406
Query: 191 STKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP 232
+ +RN G + L + M + V D+ S+ + NK+P
Sbjct: 407 FWEAMRNYARLHGDIDLEDYMEELMV---DVDPSKAVINKIP 445
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 227/506 (44%), Gaps = 83/506 (16%)
Query: 17 SSLFPQIARCKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFF 73
S++ + C S L K +H K +GD +A L+ ++S+ RDL
Sbjct: 498 STVLAILTSCDSSDSLIFGKSVHCWLQK---LGDLTSA--FLRLETMSETRDLT------ 546
Query: 74 TQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACA 133
SWN++I A + + LE+L F M EG + + T + A
Sbjct: 547 ---------SWNSVISGCASSG-----HHLESLRAFQAMSREGKIRHDLITLLGTISASG 592
Query: 134 KMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTK 193
+G + +G+ HG +K
Sbjct: 593 NLGLVLQGRCFHGLAIK------------------------------------------- 609
Query: 194 LVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFK 253
++E L N +I + R DI ++ K+F + ++ SWN +IS +QN +
Sbjct: 610 -----SLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR 664
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVI 313
E +F ++++ PN IT V +L A ++LG+ G H + + + + + +A++
Sbjct: 665 EVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALV 721
Query: 314 DMYAKCGSVEKAIQVFEKIENKKNAIT-WSAIIGGLAMHGRANDALDYYRKMQQ-AGVTP 371
DMY+ CG +E ++VF + N+I+ W+++I HG A++ ++++ + + P
Sbjct: 722 DMYSSCGMLETGMKVFRN--SGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXX 431
+I LLSACSH+G I+EG S + M + G++P EH +VD
Sbjct: 780 NKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEF 839
Query: 432 VLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNW 491
+ + +W ALL AC HG+ K+G+ VA L ++ P ++ Y++L+N + G W
Sbjct: 840 ITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGW 899
Query: 492 VGVVEVRLKMKEMDVRKDPGCSWIEI 517
V +R +++ ++K PG S I++
Sbjct: 900 EEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 206/491 (41%), Gaps = 60/491 (12%)
Query: 23 IARCKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNP 79
I+ C SI++L + +H IK+G + + S D + A F ++
Sbjct: 296 ISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCR 355
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
+ S N I+ FA + EA G QM S ++P+ T S+ C + +
Sbjct: 356 DVISSNAILNGFAANGMFE-----EAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSR 410
Query: 140 EGKEIHGFVVKLGLDNDEF-VASNLVRMYAMCGVMEDAYLLF-----------SNYVSHF 187
EG+ +HG+ V++ + + V ++++ MY CG+ A LLF ++ +S F
Sbjct: 411 EGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAF 470
Query: 188 DNNS-TKLVRN-----------KRMQEGVVVLWNVMIDG-------------FVRLGDIG 222
N T +N + V+ D +LGD+
Sbjct: 471 SQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLT 530
Query: 223 ASRKLFNKMPQ-RSVVSWNVMISGYAQNGFFKEAMDVFHDM-QMGDVSPNYITLVSVLPA 280
++ M + R + SWN +ISG A +G E++ F M + G + + ITL+ + A
Sbjct: 531 SAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISA 590
Query: 281 ISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAIT 340
LG + G+ H A K+ E+D L + +I MY +C +E A++VF I + N +
Sbjct: 591 SGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISD-PNLCS 649
Query: 341 WSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMV 400
W+ +I L+ + + +R ++ + P ++ ++GLLSA + G G H++
Sbjct: 650 WNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLI 706
Query: 401 KVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMG 460
+ G + +VD N + W +++ A HG MG
Sbjct: 707 R-RGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISA-WNSVISAHGFHG---MG 761
Query: 461 ERVARTLMKLF 471
E+ M+LF
Sbjct: 762 EKA----MELF 768
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 4/199 (2%)
Query: 207 LWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD 266
L N +++ + + ++ ++ +F M R +VSWN +++ NG ++++ F M
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSG 284
Query: 267 VSPNYITLVSVLPAISRLGALELGKWVHLYAEKN--EIEIDDVLGSAVIDMYAKCGSVEK 324
+ +T V+ A S + L LG+ +H K+ E +G+++I MY+KCG E
Sbjct: 285 QEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEA 344
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG-VTPTDVVYIGLLSAC 383
A VFE++ ++ I+ +AI+ G A +G +A +MQ + P + + S C
Sbjct: 345 AETVFEELVC-RDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 384 SHAGLIEEGRSLFNHMVKV 402
EGR++ + V++
Sbjct: 404 GDLSFSREGRAVHGYTVRM 422
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 98/191 (51%), Gaps = 1/191 (0%)
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPN 270
++ + R G++ +S LF+++ ++ V+ WN MI+ QNG + A+ +F +M +
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFD 187
Query: 271 YITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFE 330
TL+ A+S L +H A + + D L +A++++YAK ++ A VF
Sbjct: 188 STTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFT 247
Query: 331 KIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIE 390
+E+ ++ ++W+ I+ +G +L Y++ M +G V + ++SACS +
Sbjct: 248 HMEH-RDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELT 306
Query: 391 EGRSLFNHMVK 401
G SL ++K
Sbjct: 307 LGESLHGLVIK 317
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 220/489 (44%), Gaps = 71/489 (14%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
+Q+HA IK G ++ ++ S L + + F + + SWN ++ F
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYS--KYGHLVDSVRVFESVEEKDLVSWNALLSGFL 161
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
EALG F M E VE + FT SV+K CA + +Q+GK++H VV G
Sbjct: 162 RNGKGK-----EALGVFAAMYRE-RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMI 212
D +VVL MI
Sbjct: 216 RD-------------------------------------------------LVVLGTAMI 226
Query: 213 DGFVRLGDIGASRKLFNKMPQRS-VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNY 271
+ +G I + K++N + + V N +ISG +N +KEA + M PN
Sbjct: 227 SFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRPNV 281
Query: 272 ITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK 331
L S L S L +GK +H A +N D L + ++DMY KCG + +A +F
Sbjct: 282 RVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRA 341
Query: 332 IENKKNAITWSAIIGGLAMHGRANDALDYYRKM--QQAGVTPTDVVYIGLLSACSHAGLI 389
I +K + ++W+++I A++G AL+ +R+M + +GV P V ++ ++SAC+HAGL+
Sbjct: 342 IPSK-SVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLV 400
Query: 390 EEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDD----VIWK 445
+EG+ F M + + P EHY C +D V M + IW
Sbjct: 401 KEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWV 460
Query: 446 ALLGACKMHGNVKMGERVARTLM-KLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEM 504
A+L AC ++ ++ GE VAR LM + P ++ YV +SN +A+ G W V E+R K+K
Sbjct: 461 AVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNK 520
Query: 505 DVRKDPGCS 513
+ K G S
Sbjct: 521 GLVKTAGHS 529
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 12/256 (4%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
+VL V I F D LF+++PQR + S N +S + ++G + + +F +Q+
Sbjct: 23 LVLRCVFIRNFATHAD-----HLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF--LQI 75
Query: 265 GDVSPNYI--TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
SP+ T VL A S L E G+ VH K E + +A+IDMY+K G +
Sbjct: 76 HRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHL 135
Query: 323 EKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
+++VFE +E +K+ ++W+A++ G +G+ +AL + M + V ++ ++
Sbjct: 136 VDSVRVFESVE-EKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKT 194
Query: 383 CSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDV 442
C+ ++++G+ + H + VV V M+ ++ + D+V
Sbjct: 195 CASLKILQQGKQV--HAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEV 252
Query: 443 IWKALLGACKMHGNVK 458
+ +L+ C + N K
Sbjct: 253 MLNSLISGCIRNRNYK 268
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 19 LFPQIARCKSIKQL---KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQ 75
L +A C L KQIH ++ G + D ++ + + AR F
Sbjct: 284 LSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQ--IVQARTIFRA 341
Query: 76 MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGL-VEPNRFTFPSVLKACAK 134
+ + + SW ++I A+A D ++AL F +MC EG V PN TF V+ ACA
Sbjct: 342 IPSKSVVSWTSMIDAYAVNGDG-----VKALEIFREMCEEGSGVLPNSVTFLVVISACAH 396
Query: 135 MGRIQEGKEIHGFV 148
G ++EGKE G +
Sbjct: 397 AGLVKEGKECFGMM 410
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 143/537 (26%), Positives = 244/537 (45%), Gaps = 76/537 (14%)
Query: 35 IHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAET 94
IH + ++ GLIGD A ++ S +L+ A + F + + + SW+ +I ++ +
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCG--ELEIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 95 DDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLK-----ACAKMGR------------ 137
D EA+ F M ++PN T SVL+ A +++G+
Sbjct: 380 GQHD-----EAISLFRDM-MRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433
Query: 138 --IQEGKEIHGFVVKLG-----------LDNDEFVASN-LVRMYAMCGVMEDAYLLFSNY 183
++ + K G L + VA N L + Y G A+ ++ N
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Query: 184 VSH-------------------FDNNSTKLVRNKRMQEGV---VVLWNVMIDGFVRLGDI 221
H D V + ++ G + + +I+ F + +
Sbjct: 494 KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDAL 553
Query: 222 GASRKLFNKMP-QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPA 280
A+ LF+K ++S VSWN+M++GY +G +EA+ F M++ PN +T V+++ A
Sbjct: 554 AAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRA 613
Query: 281 ISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAIT 340
+ L AL +G VH + +G++++DMYAKCG +E + + F +I NK ++
Sbjct: 614 AAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKY-IVS 672
Query: 341 WSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMV 400
W+ ++ A HG A+ A+ + MQ+ + P V ++ +LSAC HAGL+EEG+ +F M
Sbjct: 673 WNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMG 732
Query: 401 KVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMG 460
+ IE VEHY CMVD + M ++ +W ALL + +MH N+ +
Sbjct: 733 ERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLS 792
Query: 461 ERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEI 517
L+KL P + Y S+ +G V ++K K P CSWIE+
Sbjct: 793 NAALCQLVKLEPLNPSHY--------SQDRRLGEVNNVSRIK-----KVPACSWIEV 836
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 215/449 (47%), Gaps = 64/449 (14%)
Query: 13 PTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKF 72
P + ++L + CK+ + L Q+H I +GL P +++ S+ R+DL +R
Sbjct: 2 PINYTNLLLMLRECKNFRCLLQVHGSLIVSGL--KP--HNQLINAYSLFQRQDL--SRVI 55
Query: 73 FTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
F + +P WN++IR + EALGFFG M E ++P++++F LKAC
Sbjct: 56 FDSVRDPGVVLWNSMIRGYTRAGLHR-----EALGFFGYMSEEKGIDPDKYSFTFALKAC 110
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMY------------------------- 167
A ++G IH + ++GL++D ++ + LV MY
Sbjct: 111 AGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWN 170
Query: 168 ------AMCGVMEDAYLLFSN---------YVSHFD----------NNSTKLVRNKRMQE 202
A G A LLF + +VS ++ ++ + + +++
Sbjct: 171 TMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK 230
Query: 203 GVVVLWNV-MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHD 261
G + ++ +ID + D+ A+ +F ++ ++ SW M++ YA NGFF+E +++F
Sbjct: 231 GFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDL 290
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
M+ DV N + S L A + +G L G +H YA + + D + ++++ MY+KCG
Sbjct: 291 MRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGE 350
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
+E A Q+F IE+ ++ ++WSA+I G+ ++A+ +R M + + P V +L
Sbjct: 351 LEIAEQLFINIED-RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQ 409
Query: 382 ACSHAGLIEEGRSLFNHMVKVVGIEPRVE 410
C+ G+S+ + +K IE +E
Sbjct: 410 GCAGVAASRLGKSIHCYAIK-ADIESELE 437
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 159/374 (42%), Gaps = 63/374 (16%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFA 92
K IH + IK + + A ++ + R A K F ++ + ++N + + +
Sbjct: 421 KSIHCYAIKADIESELETATAVISMYAKCGR--FSPALKAFERLPIKDAVAFNALAQGYT 478
Query: 93 ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+ D + +A + M G V P+ T +L+ CA G ++G ++K G
Sbjct: 479 QIGDAN-----KAFDVYKNMKLHG-VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHG 532
Query: 153 LDNDEFVASNLVRMYAMCGVMEDAYLLF----------------SNYVSH---------- 186
D++ VA L+ M+ C + A +LF + Y+ H
Sbjct: 533 FDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATF 592
Query: 187 -------FDNNSTKLVRNKR-------MQEGVVV--------------LWNVMIDGFVRL 218
F N+ V R ++ G+ V + N ++D + +
Sbjct: 593 RQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKC 652
Query: 219 GDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVL 278
G I +S K F ++ + +VSWN M+S YA +G A+ +F MQ ++ P+ ++ +SVL
Sbjct: 653 GMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVL 712
Query: 279 PAISRLGALELGKWV-HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKN 337
A G +E GK + E+++IE + + ++D+ K G +A+++ ++ K +
Sbjct: 713 SACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTS 772
Query: 338 AITWSAIIGGLAMH 351
W A++ MH
Sbjct: 773 VGVWGALLNSSRMH 786
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 207/418 (49%), Gaps = 35/418 (8%)
Query: 78 NP---NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAK 134
NP + SWNT+I +A+ ++ EAL M GL + + +F +VL +
Sbjct: 219 NPELNDTISWNTLIAGYAQNGYEE-----EALKMAVSMEENGL-KWDEHSFGAVLNVLSS 272
Query: 135 MGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVM---EDAYLLFSNYVSHFDNNS 191
+ ++ GKE+H V+K G +++FV+S +V +Y CG M E A+LL+ F N
Sbjct: 273 LKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG-----FGN-- 325
Query: 192 TKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
+ + MI G+ G + +++LF+ + ++++V W M GY
Sbjct: 326 -------------LYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQ 372
Query: 252 FKEAMDVFHDMQMGDV-SPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGS 310
+++ + +P+ + +VSVL A S +E GK +H ++ + I +D L +
Sbjct: 373 PDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT 432
Query: 311 AVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
A +DMY+KCG+VE A ++F+ +++ + ++A+I G A HG + ++ M + G
Sbjct: 433 AFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFK 491
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXX 430
P ++ ++ LLSAC H GL+ EG F M++ I P HY CM+D
Sbjct: 492 PDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIE 551
Query: 431 XVLNM-PIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFAS 487
+ + + D VI A L AC + N ++ + V L+ + + Y+ ++N +AS
Sbjct: 552 LMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYAS 609
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 134/594 (22%), Positives = 246/594 (41%), Gaps = 127/594 (21%)
Query: 29 IKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDL-KYARKFFTQMNNPNCFSWNTI 87
+K LK H I++ G L A + +++ + L + AR F +M N +SWN +
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV 60
Query: 88 IRAF-----------------AETDDDDYKNPL-----------EALGFFGQMC--SEGL 117
I A+ E D Y L EA+ FG+M +
Sbjct: 61 IAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD 120
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
+ + FT +++K AK+ + G+++HG +VK G D +F S+L+ MY+ CG ++
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQ-RSV 236
+F+ F ++ V N MI + R GDI + +F + P+
Sbjct: 181 NIFNGSCVEFVDS---------------VARNAMIAAYCREGDIDKALSVFWRNPELNDT 225
Query: 237 VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLY 296
+SWN +I+GYAQNG+ +EA+ + M+ + + + +VL +S L +L++GK VH
Sbjct: 226 ISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHAR 285
Query: 297 AEKNEIEIDDVLGSAVIDMYAKCGSVE-------------------------------KA 325
KN + + S ++D+Y KCG+++ +A
Sbjct: 286 VLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEA 345
Query: 326 IQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRK-MQQAGVTPTDVVYIGLLSACS 384
++F+ + ++KN + W+A+ G + + L+ R + TP +V + +L ACS
Sbjct: 346 KRLFDSL-SEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACS 404
Query: 385 HAGLIEEGRSLFNHMVKV------------------------------VGIEPRVEHYGC 414
+E G+ + H ++ E Y
Sbjct: 405 LQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNA 464
Query: 415 MVDXXXXXXXXXXXXXXVLNMP---IRPDDVIWKALLGACKMHGNVKMGERVARTLMKLF 471
M+ +M +PD++ + ALL AC+ G V GE+ +++++ +
Sbjct: 465 MIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAY 524
Query: 472 --PHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMD-VRKDP--------GCSW 514
++G Y + +++ +E+ M+ +D V KD CSW
Sbjct: 525 NISPETGHYTCMIDLYGKAYRLDKAIEL---MEGIDQVEKDAVILGAFLNACSW 575
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 136/354 (38%), Gaps = 84/354 (23%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILK-------------------------- 56
++ KS+K K++HA +K G + ++ I+
Sbjct: 270 LSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSA 329
Query: 57 ---FLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMC 113
+ S + + A++ F ++ N W + + + + P L
Sbjct: 330 SSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL-----NLRQPDSVLELARAFI 384
Query: 114 SEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVM 173
+ P+ SVL AC+ ++ GKEIHG ++ G+ D+ + + V MY+ CG +
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Query: 174 EDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQ 233
E A +F S F+ ++ V++N
Sbjct: 445 EYAERIFD---SSFERDT--------------VMYN------------------------ 463
Query: 234 RSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLG-ALELGKW 292
MI+G A +G ++ F DM G P+ IT +++L A G LE K+
Sbjct: 464 -------AMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKY 516
Query: 293 VHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN-KKNAITWSAII 345
E I + + +ID+Y K ++KAI++ E I+ +K+A+ A +
Sbjct: 517 FKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFL 570
>AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15661092-15662705 FORWARD
Length = 537
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 184/367 (50%), Gaps = 33/367 (8%)
Query: 286 ALELGKWVHLYAEKNEIEIDDVLG-SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAI 344
AL+ K VH + + + I D+ +++I+MY+ CGSVE A+ VF + ++N TW +
Sbjct: 196 ALQEAKVVHEFI-TSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMP-ERNLETWCGV 253
Query: 345 IGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVG 404
I A +G+ DA+D + + +Q G P ++ + AC G + EG F M K G
Sbjct: 254 IRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYG 313
Query: 405 IEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVA 464
I P +EHY +V V +M P+ +W+ L+ ++HG++ +G+R
Sbjct: 314 IIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQ 371
Query: 465 RTLMKLFPHDSGSYVALSNIFASRGNW---VGVVEVR----LKMKEMDVRKDPGCSWIEI 517
+ +L ASR N G+V V+ +K K + K P
Sbjct: 372 DMVEQLD--------------ASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYG---- 413
Query: 518 DGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHS 577
I D S P +E+ L+ + + GY P L ++D+E K+ L H+
Sbjct: 414 ---IRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHN 470
Query: 578 ERIAIAFGLISTRPQTPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGV 637
ER A + T ++ +R++KNLRVC DCH+++KL+S+I R++I RD KRFHH + GV
Sbjct: 471 ERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGV 530
Query: 638 CSCMDYW 644
CSC +YW
Sbjct: 531 CSCREYW 537
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 209/430 (48%), Gaps = 28/430 (6%)
Query: 29 IKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTII 88
++ L+Q+H +K G G+ I+ R + AR+ F ++ NP+ SWN I+
Sbjct: 178 LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKC--RVMSDARRVFDEIVNPSDVSWNVIV 235
Query: 89 RAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFV 148
R + E +D EA+ F +M E V P T SV+ AC++ ++ GK IH
Sbjct: 236 RRYLEMGFND-----EAVVMFFKML-ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIA 289
Query: 149 VKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLW 208
VKL + D V++++ MY C +E A +F R+K ++ W
Sbjct: 290 VKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQ------------TRSKDLKS-----W 332
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
+ G+ G +R+LF+ MP+R++VSWN M+ GY + EA+D M+ +
Sbjct: 333 TSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIEN 392
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQV 328
+ +TLV +L S + +++GK H + ++ + + ++ +A++DMY KCG+++ A
Sbjct: 393 IDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIW 452
Query: 329 FEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGL 388
F ++ ++ ++W+A++ G+A GR+ AL ++ M Q P+ LL+ C++
Sbjct: 453 FRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPA 511
Query: 389 IEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALL 448
+ G+++ +++ G + V G MVD R D ++W +++
Sbjct: 512 LNLGKAIHGFLIR-DGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSII 569
Query: 449 GACKMHGNVK 458
C +G K
Sbjct: 570 RGCCRNGRSK 579
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 210/482 (43%), Gaps = 86/482 (17%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDR------------- 63
SS+ +R +++ K IHA +K ++ D + + + DR
Sbjct: 267 SSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRS 326
Query: 64 RDLKY----------------ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALG 107
+DLK AR+ F M N SWN ++ + + D EAL
Sbjct: 327 KDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWD-----EALD 381
Query: 108 FFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMY 167
F M E + + T +L C+ + +Q GK+ HGF+ + G D + VA
Sbjct: 382 FLTLMRQE-IENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVA------- 433
Query: 168 AMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKL 227
N ++D + + G + ++
Sbjct: 434 -----------------------------------------NALLDMYGKCGTLQSANIW 452
Query: 228 FNKMPQ-RSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGA 286
F +M + R VSWN +++G A+ G ++A+ F MQ+ + P+ TL ++L + + A
Sbjct: 453 FRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPA 511
Query: 287 LELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIG 346
L LGK +H + ++ +ID V+ A++DMY+KC + AI+VF++ + + I W++II
Sbjct: 512 LNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIR 570
Query: 347 GLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIE 406
G +GR+ + + + ++ GV P V ++G+L AC G +E G F+ M I
Sbjct: 571 GCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHIS 630
Query: 407 PRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVART 466
P+VEHY CM++ +L MP P + + AC+ + K+G A+
Sbjct: 631 PQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKR 690
Query: 467 LM 468
LM
Sbjct: 691 LM 692
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
+ L N I+ + + G + +R+LF +MP+R SWN +I+ AQNG E +F M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEK 324
V + VL + + L L + +H K + L ++++D+Y KC +
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 325 AIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACS 384
A +VF++I N + ++W+ I+ G ++A+ + KM + V P + ++ ACS
Sbjct: 216 ARRVFDEIVNPSD-VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS 274
Query: 385 HAGLIEEGRSLFNHMVKV 402
+ +E G+ + VK+
Sbjct: 275 RSLALEVGKVIHAIAVKL 292
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 185/384 (48%), Gaps = 60/384 (15%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
DL YARK F M N +W +I + + +D EA F G+ N
Sbjct: 132 DLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLED-----EAFALFEDYVKHGIRFTNERM 186
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCG----------VME 174
F +L C++ + G+++HG +VK+G+ N V S+LV YA CG +ME
Sbjct: 187 FVCLLNLCSRRAEFELGRQVHGNMVKVGVGN-LIVESSLVYFYAQCGELTSALRAFDMME 245
Query: 175 D---------------------AYLLFSNYVSHF----------------DNNSTKLVRN 197
+ A +F ++H+ + + + R
Sbjct: 246 EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQ 305
Query: 198 ------KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
KRM + V + ++D + + G+I RK+F+ M R+ V+W +I+ +A+ GF
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 365
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
+EA+ +F M+ + N +T+VS+L A +GAL LGK +H KN IE + +GS
Sbjct: 366 GEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST 425
Query: 312 VIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
++ +Y KCG A V +++ + ++ ++W+A+I G + G ++ALD+ ++M Q GV P
Sbjct: 426 LVWLYCKCGESRDAFNVLQQLPS-RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Query: 372 TDVVYIGLLSACSHAGLIEEGRSL 395
Y L AC+++ + GRS+
Sbjct: 485 NPFTYSSALKACANSESLLIGRSI 508
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 167/376 (44%), Gaps = 63/376 (16%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
S+ + K+++ +Q+H+ +K + D ++ + ++ RK F M+
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCG--EISDCRKVFDGMS 346
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
N N +W +II A A + EA+ F M L+ N T S+L+AC +G
Sbjct: 347 NRNTVTWTSIIAAHAREGFGE-----EAISLFRIMKRRHLI-ANNLTVVSILRACGSVGA 400
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
+ GKE+H ++K ++ + ++ S LV +Y C
Sbjct: 401 LLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKC--------------------------- 433
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFN---KMPQRSVVSWNVMISGYAQNGFFKE 254
G SR FN ++P R VVSW MISG + G E
Sbjct: 434 ------------------------GESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESE 469
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
A+D +M V PN T S L A + +L +G+ +H A+KN + +GSA+I
Sbjct: 470 ALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIH 529
Query: 315 MYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
MYAKCG V +A +VF+ + +KN ++W A+I G A +G +AL +M+ G D
Sbjct: 530 MYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDY 588
Query: 375 VYIGLLSACSHAGLIE 390
++ +LS C L E
Sbjct: 589 IFATILSTCGDIELDE 604
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 9/208 (4%)
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMD 257
K + V+ N +I VRLGD+ +RK+F+ MP+++ V+W MI GY + G EA
Sbjct: 110 KCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFA 169
Query: 258 VFHD-MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI---DDVLGSAVI 313
+F D ++ G N V +L SR ELG+ VH N +++ + ++ S+++
Sbjct: 170 LFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVH----GNMVKVGVGNLIVESSLV 225
Query: 314 DMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTD 373
YA+CG + A++ F+ +E +K+ I+W+A+I + G A+ + M P +
Sbjct: 226 YFYAQCGELTSALRAFDMME-EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNE 284
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+L ACS + GR + + +VK
Sbjct: 285 FTVCSILKACSEEKALRFGRQVHSLVVK 312
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 182/403 (45%), Gaps = 60/403 (14%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKT-GLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQ 75
+++ P + K++K K++HAH +K+ + P + ++ D+ R+ F
Sbjct: 320 TTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCG--DMASGRRVFYG 377
Query: 76 MNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKM 135
N SW ++ +A D +AL M EG P+ T +VL CA++
Sbjct: 378 SKQRNAISWTALMSGYAANGRFD-----QALRSIVWMQQEGF-RPDVVTIATVLPVCAEL 431
Query: 136 GRIQEGKEIHGFVVK-LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKL 194
I++GKEIH + +K L L N V S +V MY+ CGV E
Sbjct: 432 RAIKQGKEIHCYALKNLFLPNVSLVTSLMV-MYSKCGVPEYPI----------------- 473
Query: 195 VRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKE 254
+LF+++ QR+V +W MI Y +N +
Sbjct: 474 -------------------------------RLFDRLEQRNVKAWTAMIDCYVENCDLRA 502
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
++VF M + P+ +T+ VL S L AL+LGK +H + K E E + + +I
Sbjct: 503 GIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIK 562
Query: 315 MYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
MY KCG + A F+ + K ++TW+AII + DA++ + +M G TP
Sbjct: 563 MYGKCGDLRSANFSFDAVA-VKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTF 621
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
+ +LS CS AG ++E FN M+++ ++P EHY +++
Sbjct: 622 TFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIE 664
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 198/440 (45%), Gaps = 62/440 (14%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
S+L R KS+ KQ+H H GL + +++ + +K A+K F +
Sbjct: 115 SALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACG--SVKDAQKVFDES 172
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
+ N +SWN ++R + Y+ + L F +M G V+ N ++ +V K+ A
Sbjct: 173 TSSNVYSWNALLRGTVISGKKRYQ---DVLSTFTEMRELG-VDLNVYSLSNVFKSFAGAS 228
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH----FDNNST 192
+++G + H +K GL N F+ ++LV MY CG + A +F V +
Sbjct: 229 ALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 193 KLVRNKRMQEGV----------------VVLWNV-------------------------- 210
L NKR E + V+L +
Sbjct: 289 GLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNY 348
Query: 211 ---------MIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHD 261
+ID + + GD+ + R++F QR+ +SW ++SGYA NG F +A+
Sbjct: 349 VEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVW 408
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
MQ P+ +T+ +VLP + L A++ GK +H YA KN + L ++++ MY+KCG
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 322 VEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLS 381
E I++F+++E ++N W+A+I + ++ +R M + P V +L+
Sbjct: 469 PEYPIRLFDRLE-QRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLT 527
Query: 382 ACSHAGLIEEGRSLFNHMVK 401
CS ++ G+ L H++K
Sbjct: 528 VCSDLKALKLGKELHGHILK 547
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 52/284 (18%)
Query: 121 NRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF 180
N TF ++L+AC + + GK++H + GL+++EF+ + LV MY C
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTAC---------- 159
Query: 181 SNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWN 240
G + ++K+F++ +V SWN
Sbjct: 160 --------------------------------------GSVKDAQKVFDESTSSNVYSWN 181
Query: 241 VMISGYAQNG--FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAE 298
++ G +G +++ + F +M+ V N +L +V + + AL G H A
Sbjct: 182 ALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAI 241
Query: 299 KNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDAL 358
KN + L ++++DMY KCG V A +VF++I +++ + W A+I GLA + R +AL
Sbjct: 242 KNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIV-ERDIVVWGAMIAGLAHNKRQWEAL 300
Query: 359 DYYRKM-QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+R M + + P V+ +L ++ G+ + H++K
Sbjct: 301 GLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK 344
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 130/310 (41%), Gaps = 57/310 (18%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
+++ P A ++IKQ K+IH + +K + + ++ S + Y + F ++
Sbjct: 422 ATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPE--YPIRLFDRL 479
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
N +W +I + E + D + +E F + S+ P+ T VL C+ +
Sbjct: 480 EQRNVKAWTAMIDCYVE--NCDLRAGIEV--FRLMLLSKH--RPDSVTMGRVLTVCSDLK 533
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVR 196
++ GKE+HG ++K ++ FV++ +++MY CG
Sbjct: 534 ALKLGKELHGHILKKEFESIPFVSARIIKMYGKCG------------------------- 568
Query: 197 NKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAM 256
D+ ++ F+ + + ++W +I Y N F++A+
Sbjct: 569 -----------------------DLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAI 605
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGAL-ELGKWVHLYAEKNEIEIDDVLGSAVIDM 315
+ F M +PN T +VL S+ G + E ++ +L ++ + S VI++
Sbjct: 606 NCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIEL 665
Query: 316 YAKCGSVEKA 325
+CG VE+A
Sbjct: 666 LNRCGRVEEA 675
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 243 ISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEI 302
I +A+ + A+ + ++ + N T ++L A R +L GK VH++ N +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHG--RANDALDY 360
E ++ L + ++ MY CGSV+ A +VF++ N +W+A++ G + G R D L
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDE-STSSNVYSWNALLRGTVISGKKRYQDVLST 201
Query: 361 YRKMQQAGV 369
+ +M++ GV
Sbjct: 202 FTEMRELGV 210
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 229/519 (44%), Gaps = 69/519 (13%)
Query: 12 RPTHPS-SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPL----AAAEILKFLSVSDRRDL 66
RPT + S+ + C ++ +QIH + I +G+ L + ++ + L V D
Sbjct: 133 RPTEFTFSILASLVTC--VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFD---- 186
Query: 67 KYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFP 126
YA F M + + SWN +I + + D N AL F M E ++P+ +T
Sbjct: 187 -YALSVFLTMEDRDVVSWNCLILSCS-----DSGNKEVALDQFWLM-REMEIQPDEYTVS 239
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
V+ C+ + + +GK+ +K+G
Sbjct: 240 MVVSICSDLRELSKGKQALALCIKMG---------------------------------- 265
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGY 246
F +NS L ID F + + S KLF ++ + V N MI Y
Sbjct: 266 FLSNSIVL--------------GAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY 311
Query: 247 AQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD 306
+ + ++A+ +F V P+ T SVL +++ + L+ G VH K ++D
Sbjct: 312 SWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDT 370
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM-Q 365
+ +++++MY K GSV+ A+ VF K + K + I W+ +I GLA + RA ++L + ++
Sbjct: 371 AVATSLMEMYFKTGSVDLAMGVFAKTDGK-DLIFWNTVIMGLARNSRAVESLAIFNQLLM 429
Query: 366 QAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXX 425
+ P V +G+L AC +AG + EG +F+ M K G+ P EHY C+++
Sbjct: 430 NQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMI 489
Query: 426 XXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIF 485
+P P IW+ +L A G+ ++ E VA+T+++ P S Y+ L I+
Sbjct: 490 NEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIY 549
Query: 486 ASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEF 524
W V++R M E ++ G S I I+ + F
Sbjct: 550 EMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 22/263 (8%)
Query: 141 GKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRM 200
K +H +++ G + + +++Y G + +A LF + D N+
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIP---DKNT--------- 70
Query: 201 QEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFH 260
+ WNV + G + G + + LF++MP+R VVSWN MISG GF + + VF
Sbjct: 71 -----ITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125
Query: 261 DMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIE-IDDVLGSAVIDMYAKC 319
DMQ ++ P T S+L ++ + + G+ +H A + + + V+ ++V+DMY +
Sbjct: 126 DMQRWEIRPTEFTF-SILASL--VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRL 182
Query: 320 GSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGL 379
G + A+ VF +E+ ++ ++W+ +I + G ALD + M++ + P + +
Sbjct: 183 GVFDYALSVFLTMED-RDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMV 241
Query: 380 LSACSHAGLIEEGRSLFNHMVKV 402
+S CS + +G+ +K+
Sbjct: 242 VSICSDLRELSKGKQALALCIKM 264
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 214/480 (44%), Gaps = 63/480 (13%)
Query: 33 KQIHAHFIKTGL-IGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTIIRAF 91
KQ+H+ +K+G I + A ++ + S DL + + F + + SWN+I+
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACG--DLSGSMRSFNAVPEKDVISWNSIVSVC 290
Query: 92 AETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
A DY + L++L F +M G P+ F S L C++ IQ GK+IH +V+K+
Sbjct: 291 A-----DYGSVLDSLDLFSKMQFWG-KRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKM 344
Query: 152 GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVM 211
G D V + +Q + +
Sbjct: 345 GFD----------------------------------------VSSLHVQ-------SAL 357
Query: 212 IDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNY 271
ID + + I S L+ +P ++ N +++ G K+ +++F M +
Sbjct: 358 IDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDE 417
Query: 272 ITLVSVLPAISRL--GALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF 329
+TL +VL A+S +L VH A K+ D + ++ID Y K G E + +VF
Sbjct: 418 VTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVF 477
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLI 389
++++ N ++II G A +G D + R+M + + P +V + +LS CSH+GL+
Sbjct: 478 DELDTP-NIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLV 536
Query: 390 EEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLG 449
EEG +F+ + GI P + Y CMVD +L D V W +LL
Sbjct: 537 EEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQ 596
Query: 450 ACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKD 509
+C++H N +G R A LM L P + Y+ +S + G++ E+ +++E+ ++
Sbjct: 597 SCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDF----EISRQIREIAASRE 652
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 161/375 (42%), Gaps = 62/375 (16%)
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
+L A + F +M+ + ++N +I + + Y L A+ + +M S GL E T
Sbjct: 61 NLLSAHEAFDEMSVRDVVTYNLLI-----SGNSRYGCSLRAIELYAEMVSCGLRESAS-T 114
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
FPSVL C+ +EG ++H V+ LG + FV S LV +YA +++ A LF +
Sbjct: 115 FPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEML 174
Query: 185 SHFDNNSTKLVR-------NKRMQEGVVVL------------------------------ 207
L+R +KR+ E + +
Sbjct: 175 DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
Query: 208 ---------WN--------VMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNG 250
WN V++D + GD+ S + FN +P++ V+SWN ++S A G
Sbjct: 235 LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYG 294
Query: 251 FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV-LG 309
+++D+F MQ P+ +S L SR ++ GK +H Y K ++ + +
Sbjct: 295 SVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQ 354
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV 369
SA+IDMY KC +E + +++ + N ++++ L G D ++ + M G
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLPC-LNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGT 413
Query: 370 TPTDVVYIGLLSACS 384
+V +L A S
Sbjct: 414 GIDEVTLSTVLKALS 428
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 100/198 (50%), Gaps = 1/198 (0%)
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQ 263
+V N ID ++ G++ ++ + F++M R VV++N++ISG ++ G A++++ +M
Sbjct: 45 LVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMV 104
Query: 264 MGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
+ + T SVL S G VH + + SA++ +YA V+
Sbjct: 105 SCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVD 164
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC 383
A+++F+++ ++ A+ + ++ G + + Y +M+ GV + Y ++ C
Sbjct: 165 VALKLFDEMLDRNLAVC-NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGC 223
Query: 384 SHAGLIEEGRSLFNHMVK 401
SH L+ EG+ L + +VK
Sbjct: 224 SHDRLVYEGKQLHSLVVK 241
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 159/339 (46%), Gaps = 60/339 (17%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
+R F + + N F WN +I +++ + D E L F +M S + P+ FT+P V
Sbjct: 139 SRFVFDALRSKNLFQWNAVISSYSRNELYD-----EVLETFIEMISTTDLLPDHFTYPCV 193
Query: 129 LKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFD 188
+KACA M + G +HG VVK GL D FV + LV Y G + DA LF
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF-------- 245
Query: 189 NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
DI MP+R++VSWN MI ++
Sbjct: 246 -------------------------------DI---------MPERNLVSWNSMIRVFSD 265
Query: 249 NGFFKEAMDVFHDMQM----GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI 304
NGF +E+ + +M G P+ TLV+VLP +R + LGK VH +A K ++
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 305 DDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM 364
+ VL +A++DMY+KCG + A +F K+ N KN ++W+ ++GG + G + D R+M
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 365 QQAG--VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
G V +V + + C H + + L + +K
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 423
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 173/379 (45%), Gaps = 65/379 (17%)
Query: 29 IKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNNPNCFSWNTII 88
+ LK++H + +K + + L A + S + L YA++ F + + SWN +I
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVA--SYAKCGSLSYAQRVFHGIRSKTVNSWNALI 468
Query: 89 RAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFV 148
A+++D P +L QM GL+ P+ FT S+L AC+K+ ++ GKE+HGF+
Sbjct: 469 GGHAQSND-----PRLSLDAHLQMKISGLL-PDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 149 VKLGLDNDEFVASNLVRMYAMCG----------VMEDAYLLFSNYV------SHFDNNST 192
++ L+ D FV +++ +Y CG MED L+ N V + F + +
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 193 KLVRN-------------------------------------KRMQEGVVVLWNVMIDGF 215
+ R K + E + +ID +
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Query: 216 VRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLV 275
+ G I S K+FN + ++S SWN MI GY +G KEA+ +F +MQ +P+ +T +
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 276 SVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG--SAVIDMYAKCGSVEKAIQVF-EKI 332
VL A + G + G +L K+ + L + VIDM + G ++KA++V E++
Sbjct: 703 GVLTACNHSGLIHEG-LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEM 761
Query: 333 ENKKNAITWSAIIGGLAMH 351
+ + W +++ +H
Sbjct: 762 SEEADVGIWKSLLSSCRIH 780
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 170/397 (42%), Gaps = 63/397 (15%)
Query: 7 PTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDL 66
P AT T + P AR + I K +H +K L + + ++ S +
Sbjct: 290 PDVATLVT----VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC--I 343
Query: 67 KYARKFFTQMNNPNCFSWNTIIRAF-AETDDDDYKNPLEALGFFGQMCSEGL-VEPNRFT 124
A+ F NN N SWNT++ F AE D + L QM + G V+ + T
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLR------QMLAGGEDVKADEVT 397
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
+ + C + KE+H + +K EFV + LV
Sbjct: 398 ILNAVPVCFHESFLPSLKELHCYSLK-----QEFVYNELVA------------------- 433
Query: 185 SHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMIS 244
N + + + G + ++++F+ + ++V SWN +I
Sbjct: 434 ------------------------NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 245 GYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI 304
G+AQ+ + ++D M++ + P+ T+ S+L A S+L +L LGK VH + +N +E
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 305 DDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM 364
D + +V+ +Y CG + +F+ +E+ K+ ++W+ +I G +G + AL +R+M
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMED-KSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 365 QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
G+ + + + ACS + GR + +K
Sbjct: 589 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 190/412 (46%), Gaps = 22/412 (5%)
Query: 237 VSWNVMISGYAQ---NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWV 293
V+ NV I + G ++EA++V ++ + + I L+ + + ALE + V
Sbjct: 82 VAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVV 141
Query: 294 HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGR 353
H D +A+I+MY+ C SV+ A++VFE++ + N+ T ++ +G
Sbjct: 142 HECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMP-EWNSGTLCVMMRCFVNNGY 200
Query: 354 ANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYG 413
+A+D + + ++ G P ++ + S C+ G ++EG F M + GI P +EHY
Sbjct: 201 GEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYH 260
Query: 414 CMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPH 473
+ V MP+ P +W+ L+ ++HG+V++G+R A + KL
Sbjct: 261 SVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKL--- 317
Query: 474 DSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPR 533
L + S V KE R +P F D SHP+
Sbjct: 318 ---DATRLDKV--SSAGLVATKASDFVKKEPSTRSEPY--------FYSTFRPVDSSHPQ 364
Query: 534 AKEIRSMLEEISNRIRSAGYRPNITQVL-LNMDEEKKESALHYHSERIAIAFGLISTRPQ 592
I L + ++++ GY P+ L M E KE Y E IA+ L+ ++P+
Sbjct: 365 MNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYR-EEIAVVESLLKSKPR 423
Query: 593 TPLRIVKNLRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+ + ++ N+R+ DCH +KL+S I R +I RD K +H F+ GVC C + W
Sbjct: 424 SAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14510482-14511891 FORWARD
Length = 469
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 192/395 (48%), Gaps = 22/395 (5%)
Query: 253 KEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAV 312
+EA++V ++ ++ L+ + + ALE + VH +D V
Sbjct: 94 REALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVH----DCITPLDARSYHTV 149
Query: 313 IDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPT 372
I+MY+ C S + A+ VF ++ K+N+ TW +I LA +G A+D + + + G P
Sbjct: 150 IEMYSGCRSTDDALNVFNEMP-KRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPD 208
Query: 373 DVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXV 432
++ + AC G I EG F M + G+ +E Y +++ V
Sbjct: 209 KEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFV 268
Query: 433 LNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSN--IFASRGN 490
M + P +W+ L+ C + G +++G+R A + KL D+ SN + A++ +
Sbjct: 269 ERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKL---DASRMSKESNAGLVAAKAS 325
Query: 491 WVGVVEVR-LKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIR 549
+ +++ L+ +M +R DP +HEF D SH S + ++
Sbjct: 326 DSAMEKLKELRYCQM-IRDDP-------KKRMHEFRAGDTSHLGTV---SAFRSLKVQML 374
Query: 550 SAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKNLRVCEDCHS 609
G+ P + ++EE+KE L + S ++A A +I++ + PL +++N+R C D H+
Sbjct: 375 DIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHN 434
Query: 610 SIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
+ K+IS I R +I RD+K++H ++ GVCSC DYW
Sbjct: 435 TFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT1G47580.1 | Symbols: | lipoyltransferase, putative |
chr1:17484753-17486387 FORWARD
Length = 416
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 77/104 (74%)
Query: 541 LEEISNRIRSAGYRPNITQVLLNMDEEKKESALHYHSERIAIAFGLISTRPQTPLRIVKN 600
L+ + +R AGY P VL ++DEE KE AL +HSER+AIAFG+I+T P T +R++KN
Sbjct: 313 LKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKN 372
Query: 601 LRVCEDCHSSIKLISEIYKRKIIVRDRKRFHHFEKGVCSCMDYW 644
LR+C DCH+ IK++S I R+IIVRD KRFHHF G CSC DYW
Sbjct: 373 LRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 416
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 178/388 (45%), Gaps = 62/388 (15%)
Query: 18 SLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMN 77
+L R KSI+ +K+++ + G + IL + V + AR+ F ++
Sbjct: 128 ALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRIL-LMHVKCGMIID-ARRLFDEIP 185
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
N +S+ +II F ++ N +EA F M E L + TF +L+A A +G
Sbjct: 186 ERNLYSYYSIISGFV-----NFGNYVEAFELFKMMWEE-LSDCETHTFAVMLRASAGLGS 239
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF---------------SN 182
I GK++H +KLG+ ++ FV+ L+ MY+ CG +EDA F +
Sbjct: 240 IYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAG 299
Query: 183 YVSH----------FDNN-----------------STKLVRNKRMQ-----------EGV 204
Y H +D STKL + + + E
Sbjct: 300 YALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESE 359
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
+V ++D + + G + +R +F+K+P+++++SWN ++ GYA +G +A+ +F M
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA 419
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHL-YAEKNEIEIDDVLGSAVIDMYAKCGSVE 323
+V+PN++T ++VL A + G E G + L +E + I+ + + +I++ + G ++
Sbjct: 420 ANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLD 479
Query: 324 KAIQVFEKIENKKNAITWSAIIGGLAMH 351
+AI + K W+A++ M
Sbjct: 480 EAIAFIRRAPLKTTVNMWAALLNACRMQ 507
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 217/537 (40%), Gaps = 86/537 (16%)
Query: 8 TTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLK 67
TTA T P ++ L+QI K+GL+ D + ++ + S L
Sbjct: 214 TTACSLTEPD-----------VRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG--SLS 260
Query: 68 YARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRF---- 123
YARK F QM N + N ++ K EA F M S V P +
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQ-----KWGEEATKLFMDMNSMIDVSPESYVILL 315
Query: 124 -TFPSVLKACAKMGRIQEGKEIHGFVVKLGL-DNDEFVASNLVRMYAMCGVMEDAYLLF- 180
+FP + A+ +++G+E+HG V+ GL D + + LV MYA CG + DA +F
Sbjct: 316 SSFPEY--SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFY 373
Query: 181 ----------SNYVSHFDNNST--------KLVRNKRMQEGVVVL-----------W--- 208
++ ++ D N K +R + G L W
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433
Query: 209 --------------------NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQ 248
N ++ + G + RK+F+ MP+ VSWN +I A+
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Query: 249 NG-FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV 307
+ EA+ F + Q N IT SVL A+S L ELGK +H A KN I +
Sbjct: 494 SERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT 553
Query: 308 LGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQA 367
+A+I Y KCG ++ ++F ++ +++ +TW+++I G + ALD M Q
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 368 GVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXX 427
G +Y +LSA + +E G + V+ +E V +VD
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDY 672
Query: 428 XXXXVLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLMKL---FPHDSGSYVAL 481
MP+R + W +++ HG + ++ T MKL P D ++V +
Sbjct: 673 ALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALKLFET-MKLDGQTPPDHVTFVGV 727
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 111/197 (56%), Gaps = 7/197 (3%)
Query: 192 TKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGF 251
++L +N+ ++ V L N +I+ ++ GD ++RK+F++MP R+ VSW ++SGY++NG
Sbjct: 25 SRLYKNRLDKD--VYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALEL--GKWVHLYAEKNEIEIDDVLG 309
KEA+ DM + N VSVL A +G++ + G+ +H K +D V+
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 310 SAVIDMYAKC-GSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
+ +I MY KC GSV A+ F IE KN+++W++II + G A + MQ G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIE-VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 369 VTPTDVVYIGLL-SACS 384
PT+ + L+ +ACS
Sbjct: 202 SRPTEYTFGSLVTTACS 218
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 175/400 (43%), Gaps = 75/400 (18%)
Query: 18 SLFPQIARCKSIKQLK---QIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFT 74
+L ++ C S+K K QIH +K G+ + + ++ + + L RK F+
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY--LNECRKIFS 474
Query: 75 QMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFF--GQMCSEGLVEPNRFTFPSVLKAC 132
M + SWN+II A A ++ ++ EA+ F Q + L NR TF SVL A
Sbjct: 475 SMPEHDQVSWNSIIGALARSE----RSLPEAVVCFLNAQRAGQKL---NRITFSSVLSAV 527
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDN--- 189
+ + + GK+IHG +K + ++ + L+ Y CG M+ +FS DN
Sbjct: 528 SSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTW 587
Query: 190 NS--TKLVRNKRMQEGVVVLW--------------------------------------- 208
NS + + N+ + + + ++W
Sbjct: 588 NSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR 647
Query: 209 ----------NVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDV 258
+ ++D + + G + + + FN MP R+ SWN MISGYA++G +EA+ +
Sbjct: 648 ACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKL 707
Query: 259 FHDMQM-GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG--SAVIDM 315
F M++ G P+++T V VL A S G LE G + H + + + + S + D+
Sbjct: 708 FETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG-FKHFESMSDSYGLAPRIEHFSCMADV 766
Query: 316 YAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAN 355
+ G ++K EK+ K N + W ++G RAN
Sbjct: 767 LGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACC---RAN 803
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 146/342 (42%), Gaps = 66/342 (19%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSV 128
ARK F +M NC SW I+ ++ + EAL F M EG+ N++ F SV
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHK-----EALVFLRDMVKEGIF-SNQYAFVSV 108
Query: 129 LKACAKMGR--IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
L+AC ++G I G++IHG + KL D V++ L+ MY C
Sbjct: 109 LRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC---------------- 152
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGY 246
+G +G + F + ++ VSWN +IS Y
Sbjct: 153 -------------------------------IGSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 247 AQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGA--LELGKWVHLYAEKNEIEI 304
+Q G + A +F MQ P T S++ L + L + + +K+ +
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT 241
Query: 305 DDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKM 364
D +GS ++ +AK GS+ A +VF ++E +NA+T + ++ GL +A + M
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMET-RNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 365 QQA-GVTPTDVVYIGLLSACSHAGLIEE-----GRSLFNHMV 400
V+P Y+ LLS+ L EE GR + H++
Sbjct: 301 NSMIDVSPES--YVILLSSFPEYSLAEEVGLKKGREVHGHVI 340
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
+++ A ++++ ++HA ++ L D + + ++ S R D YA +FF M
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD--YALRFFNTM 680
Query: 77 NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMG 136
N +SWN++I +A + EAL F M +G P+ TF VL AC+ G
Sbjct: 681 PVRNSYSWNSMISGYARHGQGE-----EALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 137 RIQEG 141
++EG
Sbjct: 736 LLEEG 740
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 270 NYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF 329
N + L V + GA ++ H KN ++ D L + +I+ Y + G A +VF
Sbjct: 3 NCVPLSFVQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59
Query: 330 EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGL- 388
+++ +N ++W+ I+ G + +G +AL + R M + G+ ++ +L AC G
Sbjct: 60 DEMP-LRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
Query: 389 -IEEGRSLFNHMVKV 402
I GR + M K+
Sbjct: 119 GILFGRQIHGLMFKL 133
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 173/405 (42%), Gaps = 40/405 (9%)
Query: 64 RDLKYARKFFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSE-GLV 118
R A +F M P+ ++N II ++ +AL F M +
Sbjct: 130 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS-----QALDLFNSMREKRAEC 184
Query: 119 EPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYL 178
P+ TF S++ + G I+ + + +V GL N+V A+ G
Sbjct: 185 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK------PNIVSYNALMGA------ 232
Query: 179 LFSNYVSHFDNNSTKLVRNKRMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQR- 234
Y H + + V Q G+ VV + +++ + R G ++++F M +
Sbjct: 233 ----YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 288
Query: 235 ---SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGK 291
+VV++N +I Y NGF EA+++F M+ + PN +++ ++L A SR
Sbjct: 289 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD 348
Query: 292 WVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGL 348
V A+ I ++ ++ I Y +EKAI +++ + KK +++T++ +I G
Sbjct: 349 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 408
Query: 349 AMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPR 408
+ +A+ Y ++M+ + T VY +L A S G + E S+FN M K+ G EP
Sbjct: 409 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPD 467
Query: 409 VEHYGCMVDXXXXXXXXXXXXXXVLNMP---IRPDDVIWKALLGA 450
V Y M+ L M I PD + AL+ A
Sbjct: 468 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 512
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 128/278 (46%), Gaps = 22/278 (7%)
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
+ P+R T+ +++ AC G +E E+ + G+ D V N+V G
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD-LVTHNIVLSAYKSGRQ---- 131
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR--- 234
+S +S+F+ L++ +++ +N++I +LG + LFN M ++
Sbjct: 132 --YSKALSYFE-----LMKGAKVRPDTTT-FNIIIYCLSKLGQSSQALDLFNSMREKRAE 183
Query: 235 ---SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGK 291
VV++ ++ Y+ G + VF M + PN ++ +++ A + G
Sbjct: 184 CRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 243
Query: 292 WVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF---EKIENKKNAITWSAIIGGL 348
V ++N I D V + +++ Y + KA +VF K K N +T++A+I
Sbjct: 244 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 303
Query: 349 AMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
+G +A++ +R+M+Q G+ P V LL+ACS +
Sbjct: 304 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 165/388 (42%), Gaps = 41/388 (10%)
Query: 208 WNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAMDVFHDMQ 263
+N +I+ G+ + ++ KM V V+ N+++S Y + +A+ F M+
Sbjct: 84 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 143
Query: 264 MGDVSPNYITLVSVLPAISRLG----ALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC 319
V P+ T ++ +S+LG AL+L + + ++ E D V ++++ +Y+
Sbjct: 144 GAKVRPDTTTFNIIIYCLSKLGQSSQALDL--FNSMREKRAECRPDVVTFTSIMHLYSVK 201
Query: 320 GSVEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
G +E VFE + K N ++++A++G A+HG + AL ++Q G+ P V Y
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 261
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
LL++ + + + +F M++ +P V Y ++D M
Sbjct: 262 TCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 437 ---IRPDDVIWKALLGAC-KMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNWV 492
I+P+ V LL AC + V + ++ + ++ +Y + + +
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380
Query: 493 GVVEVRLKMKEMDVRKDPGCSWIEIDGVIH--------EFL--VEDESHPRAKEIRSML- 541
+ + M++ V+ D I I G +L +ED S P KE+ S +
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 440
Query: 542 ------------EEISNRIRSAGYRPNI 557
E I N+++ AG P++
Sbjct: 441 CAYSKQGQVTEAESIFNQMKMAGCEPDV 468
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 174/410 (42%), Gaps = 40/410 (9%)
Query: 64 RDLKYARKFFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSE-GLV 118
R A +F M P+ ++N II ++ +AL F M +
Sbjct: 262 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS-----QALDLFNSMREKRAEC 316
Query: 119 EPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYL 178
P+ TF S++ + G I+ + + +V GL N+V A+ G
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK------PNIVSYNALMGA------ 364
Query: 179 LFSNYVSHFDNNSTKLVRNKRMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQR- 234
Y H + + V Q G+ VV + +++ + R G ++++F M +
Sbjct: 365 ----YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 420
Query: 235 ---SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGK 291
+VV++N +I Y NGF EA+++F M+ + PN +++ ++L A SR
Sbjct: 421 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD 480
Query: 292 WVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGL 348
V A+ I ++ ++ I Y +EKAI +++ + KK +++T++ +I G
Sbjct: 481 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 540
Query: 349 AMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPR 408
+ +A+ Y ++M+ + T VY +L A S G + E S+FN M K+ G EP
Sbjct: 541 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPD 599
Query: 409 VEHYGCMVDXXXXXXXXXXXXXXVLNMP---IRPDDVIWKALLGACKMHG 455
V Y M+ L M I PD + AL+ A G
Sbjct: 600 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 144/336 (42%), Gaps = 42/336 (12%)
Query: 69 ARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQM---------CSEGLVE 119
AR F +M +C + D + Y + A G GQ +
Sbjct: 162 ARGLFFEMQKWSC-----------KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIA 210
Query: 120 PNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL 179
P+R T+ +++ AC G +E E+ + G+ D V N+V G
Sbjct: 211 PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD-LVTHNIVLSAYKSGRQ------ 263
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR----- 234
+S +S+F+ L++ +++ +N++I +LG + LFN M ++
Sbjct: 264 YSKALSYFE-----LMKGAKVRPDTTT-FNIIIYCLSKLGQSSQALDLFNSMREKRAECR 317
Query: 235 -SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWV 293
VV++ ++ Y+ G + VF M + PN ++ +++ A + G V
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 294 HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF---EKIENKKNAITWSAIIGGLAM 350
++N I D V + +++ Y + KA +VF K K N +T++A+I
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 351 HGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
+G +A++ +R+M+Q G+ P V LL+ACS +
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 153/356 (42%), Gaps = 37/356 (10%)
Query: 236 VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLG----ALELGK 291
+V+ N+++S Y + +A+ F M+ V P+ T ++ +S+LG AL+L
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL-- 305
Query: 292 WVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN---KKNAITWSAIIGGL 348
+ + ++ E D V ++++ +Y+ G +E VFE + K N ++++A++G
Sbjct: 306 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 365
Query: 349 AMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPR 408
A+HG + AL ++Q G+ P V Y LL++ + + + +F M++ +P
Sbjct: 366 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPN 424
Query: 409 VEHYGCMVDXXXXXXXXXXXXXXVLNMP---IRPDDVIWKALLGAC-KMHGNVKMGERVA 464
V Y ++D M I+P+ V LL AC + V + ++
Sbjct: 425 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 484
Query: 465 RTLMKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIH-- 522
+ ++ +Y + + + + + M++ V+ D I I G
Sbjct: 485 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 523 ------EFL--VEDESHPRAKEIRSML-------------EEISNRIRSAGYRPNI 557
+L +ED S P KE+ S + E I N+++ AG P++
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 600
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 159/371 (42%), Gaps = 70/371 (18%)
Query: 59 SVSDRRDLKYARKFFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCS 114
++ + +++ A FT+M+N PN ++N++IR +Y +A M
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-----NYGRWSDASRLLSDMI- 317
Query: 115 EGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVME 174
E + PN TF +++ A K G++ E ++++ ++K +D D F S+L+ + M ++
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 175 DAYLLFSNYVSH--FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP 232
+A +F +S F N VV +N +I GF + + +LF +M
Sbjct: 378 EAKHMFELMISKDCFPN---------------VVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 233 QRSVV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALE 288
QR +V ++N +I G Q G A +F M V P+ IT
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY-------------- 468
Query: 289 LGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAII 345
S ++D K G +EKA+ VFE ++ K + T++ +I
Sbjct: 469 ---------------------SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 346 GGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGI 405
G+ G+ D D + + GV P ++Y ++S GL EE +LF M K G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM-KEDGT 566
Query: 406 EPRVEHYGCMV 416
P Y ++
Sbjct: 567 LPNSGTYNTLI 577
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 8/220 (3%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKM----PQRSVVSWNVMISGYAQNGFFKEAMDVFH 260
+V + +++G+ I + L ++M Q + V++N +I G + EA+ +
Sbjct: 150 IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALID 209
Query: 261 DMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCG 320
M P+ T +V+ + + G ++L + EK +IE D V+ + +ID
Sbjct: 210 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 321 SVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYI 377
+V A+ +F +++NK N +T++++I L +GR +DA M + + P V +
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 378 GLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
L+ A G + E L++ M+K I+P + Y +++
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLIN 368
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 123/277 (44%), Gaps = 29/277 (10%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
S+L + + + ++++ IK + D + ++ + DR D A+ F M
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD--EAKHMFELM 386
Query: 77 NNPNCF----SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
+ +CF ++NT+I+ F + K E + F +M GLV N T+ ++++
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKA-----KRVEEGMELFREMSQRGLV-GNTVTYNTLIQGL 440
Query: 133 AKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNST 192
+ G ++I +V G+ D S L+ G +E A ++F
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF------------ 488
Query: 193 KLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQ 248
+ ++ +M+ + +N+MI+G + G + LF + + +V+ + MISG+ +
Sbjct: 489 EYLQKSKMEPDIYT-YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 249 NGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLG 285
G +EA +F +M+ PN T +++ A R G
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 30/324 (9%)
Query: 64 RDLKYARKFFTQM----NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVE 119
R L +A + F QM + PN ++N ++ E +A M +E
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG-----DAAWLLRDMMKRR-IE 255
Query: 120 PNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL 179
PN TF +++ A K+G++ E KE++ ++++ + D F +L+ M G++++A +
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV-- 237
F Y+ + RN V+ + +I GF + + K+F +M Q+ VV
Sbjct: 316 F--YL---------MERNGCYPNEVI--YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 238 --SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL 295
++ V+I GY G A +VF+ M P+ T +L + G +E +
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHG 352
Y K E++I+ V + +I K G VE A +F + +K N IT++ +I G G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 353 RANDALDYYRKMQQAGVTPTDVVY 376
++A ++KM++ G P + VY
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 146/362 (40%), Gaps = 65/362 (17%)
Query: 102 PLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVAS 161
P A F G+M G EP+ TF S+L RI++ + ++ +G + +
Sbjct: 134 PCRASCFLGKMMKLGF-EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 162 NLVRMYAMCGVMEDAYLLFS---------NYVSHFD-----------NNSTKLVRN--KR 199
L+R + A LF+ N V++ ++ L+R+ KR
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Query: 200 MQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEA 255
E V+ + +ID FV++G + +++L+N M Q SV ++ +I+G G EA
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 256 MDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDM 315
+F+ M+ PN + +++ + +E G + + + + + + +I
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 316 YAKCG-----------------------------------SVEKAIQVFEKIENKK---N 337
Y G VEKA+ +FE + ++ N
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 338 AITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFN 397
+T++ II G+ G+ DA D + + G+ P + Y ++S GLI E SLF
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 398 HM 399
M
Sbjct: 493 KM 494
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 21/244 (8%)
Query: 227 LFNKM----PQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSP-----NYITLVSV 277
LF +M P S++ + ++S A+ + + +F MQ+ + P N +
Sbjct: 70 LFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVC 129
Query: 278 LPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN--- 334
L + + LGK + L E D V +++++ Y +E AI +F++I
Sbjct: 130 LSSQPCRASCFLGKMMKL-----GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 335 KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRS 394
K N +T++ +I L + N A++ + +M G P V Y L++ G +
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 395 LFNHMVKVVGIEPRVEHYGCMVDXXX---XXXXXXXXXXXVLNMPIRPDDVIWKALLGAC 451
L M+K IEP V + ++D ++ M + PD + +L+
Sbjct: 245 LLRDMMK-RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 452 KMHG 455
M+G
Sbjct: 304 CMYG 307
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 163/324 (50%), Gaps = 27/324 (8%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKL---GLDNDEFVA 160
EA+ F M GL PN T+ +V+ AC K G E K++ F ++ G+ D
Sbjct: 286 EAISVFNSMKEYGL-RPNLVTYNAVIDACGKGG--MEFKQVAKFFDEMQRNGVQPDRITF 342
Query: 161 SNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGD 220
++L+ + + G+ E A LF + N+R+++ V +N ++D + G
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDE------------MTNRRIEQDVFS-YNTLLDAICKGGQ 389
Query: 221 IGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVS 276
+ + ++ +MP + +VVS++ +I G+A+ G F EA+++F +M+ ++ + ++ +
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 277 VLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK- 335
+L +++G E + I+ D V +A++ Y K G ++ +VF +++ +
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 336 --KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGR 393
N +T+S +I G + G +A++ +R+ + AG+ V+Y L+ A GL+
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 394 SLFNHMVKVVGIEPRVEHYGCMVD 417
SL + M K GI P V Y ++D
Sbjct: 570 SLIDEMTK-EGISPNVVTYNSIID 592
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 165/381 (43%), Gaps = 62/381 (16%)
Query: 57 FLSVSDRRDL-KYARKFFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQ 111
L+V R L + AR F +M N + FS+NT++ A + D A Q
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL-----AFEILAQ 399
Query: 112 MCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCG 171
M + ++ PN ++ +V+ AK GR E + G + LG+ D + L+ +Y G
Sbjct: 400 MPVKRIM-PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG 458
Query: 172 VMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKM 231
E+A + S V K+ VV +N ++ G+ + G +K+F +M
Sbjct: 459 RSEEALDILREMAS---------VGIKK----DVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 232 PQRSVV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGAL 287
+ V+ +++ +I GY++ G +KEAM++F + + + + + +++ A+ + G +
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 288 ELGKWVHLYAE--KNEIEIDDVLGSAVIDMYAKCGSVEKA-------------------- 325
G V L E K I + V +++ID + + +++++
Sbjct: 566 --GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 623
Query: 326 -------IQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIG 378
IQ+F ++ + N T G+ + L+ +RKM Q + P V +
Sbjct: 624 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQ---ELSCILEVFRKMHQLEIKPNVVTFSA 680
Query: 379 LLSACSHAGLIEEGRSLFNHM 399
+L+ACS E+ L +
Sbjct: 681 ILNACSRCNSFEDASMLLEEL 701
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 140/329 (42%), Gaps = 47/329 (14%)
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDA---------Y 177
+++ + G++ K I G N + S L+ Y G+ E+A Y
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 178 LLFSNYVSH--------------------FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVR 217
L N V++ FD V+ R + +N ++ R
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDR------ITFNSLLAVCSR 351
Query: 218 LGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYIT 273
G A+R LF++M R V S+N ++ + G A ++ M + + PN ++
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 274 LVSVLPAISRLGALELGKWVHLYAEKN--EIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK 331
+V+ ++ G + + ++L+ E I +D V + ++ +Y K G E+A+ + +
Sbjct: 412 YSTVIDGFAKAGRFD--EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE 469
Query: 332 IEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGL 388
+ + KK+ +T++A++GG G+ ++ + +M++ V P + Y L+ S GL
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 389 IEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
+E +F K G+ V Y ++D
Sbjct: 530 YKEAMEIFREF-KSAGLRADVVLYSALID 557
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 166/421 (39%), Gaps = 84/421 (19%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
PN ++N +I A + ++K + FF +M G V+P+R TF S+L C++ G
Sbjct: 301 PNLVTYNAVIDACGK-GGMEFK---QVAKFFDEMQRNG-VQPDRITFNSLLAVCSRGGLW 355
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
+ + + + ++ D F + L+ G M+ A+ + + + K
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQ------------MPVK 403
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP-------------------------- 232
R+ VV ++ +IDGF + G + LF +M
Sbjct: 404 RIMPNVVS-YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 233 -------------QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
++ VV++N ++ GY + G + E VF +M+ V PN +T +++
Sbjct: 463 ALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---K 336
S+ G + + + + D VL SA+ID K G V A+ + +++ +
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 337 NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLF 396
N +T+++II + + DY G P + L+ +I+ LF
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADY----SNGGSLPFSSSALSALTETEGNRVIQ----LF 634
Query: 397 NHMV------KVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGA 450
+ E ++ C+++ + + I+P+ V + A+L A
Sbjct: 635 GQLTTESNNRTTKDCEEGMQELSCILE----------VFRKMHQLEIKPNVVTFSAILNA 684
Query: 451 C 451
C
Sbjct: 685 C 685
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 119/266 (44%), Gaps = 46/266 (17%)
Query: 195 VRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQ----RSVVSWNVMISGYAQNG 250
V+ +R + L + MI R G + ++++F +V +++ +IS Y ++G
Sbjct: 223 VKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSG 282
Query: 251 FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAE--KNEIEIDDVL 308
+EA+ VF+ M+ + PN +T +V+ A + G +E + + E +N ++ D +
Sbjct: 283 LHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK-GGMEFKQVAKFFDEMQRNGVQPDRIT 341
Query: 309 GSAVIDMYAKCGSVEKAIQVFEKIENKK-------------------------------- 336
++++ + ++ G E A +F+++ N++
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 337 ------NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIE 390
N +++S +I G A GR ++AL+ + +M+ G+ V Y LLS + G E
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 391 EGRSLFNHMVKVVGIEPRVEHYGCMV 416
E + M VGI+ V Y ++
Sbjct: 462 EALDILREMAS-VGIKKDVVTYNALL 486
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 147/363 (40%), Gaps = 66/363 (18%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
PN S++T+I FA+ D EAL FG+M G + +R ++ ++L K+GR
Sbjct: 407 PNVVSYSTVIDGFAKAGRFD-----EALNLFGEMRYLG-IALDRVSYNTLLSIYTKVGRS 460
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS------------NYVSH 186
+E +I + +G+ D + L+ Y G ++ +F+ Y +
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 187 FDNNSTKLVRNKRMQ----------EGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR-- 234
D S + + M+ VVL++ +ID + G +G++ L ++M +
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 235 --SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP------AISRLGA 286
+VV++N +I + ++ MD D G P + +S L I G
Sbjct: 581 SPNVVTYNSIIDAFGRSA----TMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQ 636
Query: 287 L-----------------ELGKWVHLYAEKNEIEIDD--VLGSAVIDMYAKCGSVEKAIQ 327
L EL + ++ + +++EI V SA+++ ++C S E A
Sbjct: 637 LTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASM 696
Query: 328 VFEKIENKKNAITWSAIIGGLAMHGRAN---DALDYYRKMQQAGVTPTDVVYIGLLSACS 384
+ E++ N + ++ GL M R N A + K+ + + Y L
Sbjct: 697 LLEELRLFDNKVY--GVVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLW 754
Query: 385 HAG 387
H G
Sbjct: 755 HFG 757
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 179/405 (44%), Gaps = 40/405 (9%)
Query: 5 CEPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRR 64
C+P T T + L + ++ L ++ A IK ++ + K+ R
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY------R 272
Query: 65 DLKYARKFFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEP 120
++ A FT+M PN ++N++I +Y +A M E + P
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLC-----NYGRWSDASRLLSNML-EKKINP 326
Query: 121 NRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF 180
N TF +++ A K G++ E +++H +++ +D D + L+ + M +++A +F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 181 SNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SV 236
VS + N + +N +I+GF + + +LF +M QR +
Sbjct: 387 KFMVSK------DCLPN-------IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 237 VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLY 296
V++ +I G+ Q G A VF M V + +T +L + G L+ + Y
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 297 AEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRAND 356
+K+E+E++ + + +I+ K G V +A +F + K + +T++ +I GL +
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQE 553
Query: 357 ALDYYRKMQQAGVTPTDVVYIGLLSA----CSHAG---LIEEGRS 394
A D +RKM++ G P Y L+ A C A LI+E RS
Sbjct: 554 ADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 156/347 (44%), Gaps = 34/347 (9%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ ++ T++ + D D AL +M ++ N F +++ + K +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDL-----ALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHV 274
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
+ ++ + G+ + ++L+ G DA L SN + K
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE------------K 322
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKE 254
++ VV +N +ID F + G + + KL +M QRS+ +++N++I+G+ + E
Sbjct: 323 KINPNVVT-FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI--DDVLGSAV 312
A +F M D PN T +++ + +E G V L+ E ++ + + V + +
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG--VELFREMSQRGLVGNTVTYTTI 439
Query: 313 IDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGV 369
I + + G + A VF+++ + + + +T+S ++ GL +G+ + AL ++ +Q++ +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 370 TPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
+Y ++ AG + E LF + I+P V Y M+
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNTMI 542
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 21/302 (6%)
Query: 105 ALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLV 164
AL +M G EP+ T S+L RI + + +V++G D F + L+
Sbjct: 137 ALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 165 RMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGAS 224
+ +A L V +R + +V + +++G + GDI +
Sbjct: 196 HGLFLHNKASEAVALVDQMV-------------QRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 225 RKLFNKMP----QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPA 280
L NKM + +VV +N +I + + A+D+F +M+ + PN +T S++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 281 ISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---N 337
+ G + + +I + V +A+ID + K G + +A ++ E++ + +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 338 AITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFN 397
IT++ +I G MH R ++A ++ M P Y L++ +E+G LF
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 398 HM 399
M
Sbjct: 423 EM 424
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 133/304 (43%), Gaps = 21/304 (6%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
+A+ QM G +P+ FTF +++ + E + +V+ G D +
Sbjct: 171 DAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGA 223
V G ++ A L N + R K VV++N +ID + +
Sbjct: 230 VNGLCKRGDIDLALNLL---------NKMEAARIK----ANVVIFNTIIDSLCKYRHVEV 276
Query: 224 SRKLFNKMPQR----SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
+ LF +M + +VV++N +I+ G + +A + +M ++PN +T +++
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK--- 336
A + G L + +H + I+ D + + +I+ + +++A Q+F+ + +K
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 337 NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLF 396
N T++ +I G R D ++ +R+M Q G+ V Y ++ AG + + +F
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 397 NHMV 400
MV
Sbjct: 457 KQMV 460
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 107/258 (41%), Gaps = 13/258 (5%)
Query: 208 WNVMIDGFVRLGDIGASRKLFNKMP----QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQ 263
+++ I+ F R + + + KM + +V+ + +++GY + +A+ + M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 264 MGDVSPNYITLVSVLPAISRLG-ALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
P+ T +++ + A E V ++ + D V V++ K G +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDI 239
Query: 323 EKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGL 379
+ A+ + K+E K N + ++ II L + A+D + +M+ G+ P V Y L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 380 LSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXX---VLNMP 436
++ + G + L ++M++ I P V + ++D ++
Sbjct: 300 INCLCNYGRWSDASRLLSNMLE-KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 437 IRPDDVIWKALLGACKMH 454
I PD + + L+ MH
Sbjct: 359 IDPDTITYNLLINGFCMH 376
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 206/466 (44%), Gaps = 52/466 (11%)
Query: 23 IARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM----NN 78
I + SI L Q H G + L+ +L ++ +R++ +A F +M +
Sbjct: 150 IDKALSIVHLAQAH------GFMPGVLSYNAVLD-ATIRSKRNISFAENVFKEMLESQVS 202
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
PN F++N +IR F + D AL F +M ++G + PN T+ +++ K+ +I
Sbjct: 203 PNVFTYNILIRGFCFAGNIDV-----ALTLFDKMETKGCL-PNVVTYNTLIDGYCKLRKI 256
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLV--------RMYAMCGVM-----------EDAY-L 178
+G ++ + GL+ + ++ N+V RM + V+ E Y
Sbjct: 257 DDGFKLLRSMALKGLEPN-LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 179 LFSNYVSHFDNNSTKLVRNKRMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRS 235
L Y + + ++ + ++ G+ V+ + +I + G++ + + ++M R
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 236 VV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGK 291
+ ++ ++ G++Q G+ EA V +M SP+ +T +++ G +E
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 292 WVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQV-FEKIEN--KKNAITWSAIIGGL 348
V ++ + D V S V+ + + V++A++V E +E K + IT+S++I G
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 349 AMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPR 408
R +A D Y +M + G+ P + Y L++A G +E+ L N MV+ G+ P
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE-KGVLPD 554
Query: 409 VEHYGCMVDXXXXXXXXXXXXXXVLNMPIR---PDDVIWKALLGAC 451
V Y +++ +L + P DV + L+ C
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 188/450 (41%), Gaps = 37/450 (8%)
Query: 120 PNRFTFPSVLKACAKMGR-IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYL 178
P ++ +VL A + R I + + +++ + + F + L+R + G ++ A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 179 LFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR---- 234
LF D TK VV +N +IDG+ +L I KL M +
Sbjct: 227 LF-------DKMETKGCLPN------VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEP 273
Query: 235 SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVH 294
+++S+NV+I+G + G KE V +M S + +T +++ + G +H
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 295 LYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMH 351
++ + + +++I K G++ +A++ +++ + N T++ ++ G +
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 352 GRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEH 411
G N+A R+M G +P+ V Y L++ G +E+ ++ M K G+ P V
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVS 452
Query: 412 YGCMVD---XXXXXXXXXXXXXXVLNMPIRPDDVIWKALL-GACKMHGNVKMGERVARTL 467
Y ++ ++ I+PD + + +L+ G C+ + + L
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 468 MKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEF--- 524
P D +Y AL N + G+ +++ +M E V D + I+G+ +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 525 --------LVEDESHPRAKEIRSMLEEISN 546
L +ES P +++E SN
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 172/367 (46%), Gaps = 29/367 (7%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
EAL ++ G V PN F + +++ + K + E + + + K+GL ++ S L
Sbjct: 350 EALNLVKRVVDFG-VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGA 223
+ M+ G ++ A +++ + KL V +N +I+G + GDI A
Sbjct: 409 IDMFCRRGKLDTAL----SFLGEMVDTGLKL---------SVYPYNSLINGHCKFGDISA 455
Query: 224 SR----KLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
+ ++ NK + +VV++ ++ GY G +A+ ++H+M ++P+ T ++L
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 280 AISRLGALELGKWVHLYAEKNE--IEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK-- 335
+ R G + V L+ E E ++ + V + +I+ Y + G + KA + +++ K
Sbjct: 516 GLFRAGLIR--DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 336 -KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRS 394
+ ++ +I GL + G+A++A + + + ++ Y GLL G +EE S
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 395 LFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNM---PIRPDDVIWKALLGAC 451
+ MV+ G++ + YG ++D + M ++PDDVI+ +++ A
Sbjct: 634 VCQEMVQ-RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 452 KMHGNVK 458
G+ K
Sbjct: 693 SKTGDFK 699
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 107/514 (20%), Positives = 191/514 (37%), Gaps = 84/514 (16%)
Query: 59 SVSDRRDLKYARKFFTQMNNPNC----FSWNTIIRAFAETDDDDYKNPLEALGFFGQMCS 114
S+ + +DL A++ M C +N +I + + EA+G +
Sbjct: 236 SLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK-----QKVWEAVGIKKDLAG 290
Query: 115 EGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVME 174
+ L +P+ T+ +++ K+ + G E+ ++ L E S+LV G +E
Sbjct: 291 KDL-KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 175 DAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR 234
+A L R+ D G S LF
Sbjct: 350 EALNLVK-----------------------------------RVVDFGVSPNLF------ 368
Query: 235 SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALE-----L 289
+N +I + F EA +F M + PN +T ++ R G L+ L
Sbjct: 369 ---VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 290 GKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIG 346
G+ V +++ +++I+ + K G + A ++ NKK +T+++++G
Sbjct: 426 GEMV-----DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 347 GLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIE 406
G G+ N AL Y +M G+ P+ + LLS AGLI + LFN M + ++
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVK 539
Query: 407 PRVEHYGCMVDXXXXXXXXXXXXXXVLNMP---IRPDDVIWKALLGACKMHGNVKMGERV 463
P Y M++ + M I PD ++ L+ + G +
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 464 ARTLMKLFPH-DSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIH 522
L K + Y L + F G + V +M + V D C + IDG +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL- 658
Query: 523 EFLVEDESHPRAKEIRSMLEEISNRIRSAGYRPN 556
H K +L+E+ +R G +P+
Sbjct: 659 -------KHKDRKLFFGLLKEMHDR----GLKPD 681
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 154/373 (41%), Gaps = 47/373 (12%)
Query: 66 LKYARKFFTQMN----NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPN 121
++ A K F +M PN ++N +I + E D +A F +M +G+V P+
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS-----KAFEFLKEMTEKGIV-PD 576
Query: 122 RFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY---- 177
+++ ++ G+ E K + K + +E + L+ + G +E+A
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 178 ---------------LLFSNYVSHFDNNSTKLVRNKRMQEGVV---VLWNVMIDGFVRLG 219
+L + H D + + G+ V++ MID + G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 220 DIGASRKLFNKMPQRSVV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLV 275
D + +++ M V ++ +I+G + GF EA + MQ PN +T
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 276 SVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDM----YAKCGSVEKAIQVFEK 331
L +++ G +++ K V L+ N I + +A +M + + G +E+A ++ +
Sbjct: 757 CFLDILTK-GEVDMQKAVELH---NAILKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 332 IEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGL 388
+ + IT++ +I L A++ + M + G+ P V Y L+ C AG
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE 872
Query: 389 IEEGRSLFNHMVK 401
+ + L N M++
Sbjct: 873 MGKATELRNEMLR 885
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 136/328 (41%), Gaps = 31/328 (9%)
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGY 246
FD VR++R+ +GV+V + +MI + +P+ V + + ++ G
Sbjct: 159 FDLLIQHYVRSRRVLDGVLV-FKMMITKV-------------SLLPE--VRTLSALLHGL 202
Query: 247 AQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDD 306
+ F AM++F+DM + P+ V+ ++ L L K + + E +++
Sbjct: 203 VKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNI 262
Query: 307 VLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRK 363
V + +ID K V +A+ + + + K + +T+ ++ GL L+ +
Sbjct: 263 VPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDE 322
Query: 364 MQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXX 423
M +P++ L+ G IEE +L +V G+ P + Y ++D
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD-FGVSPNLFVYNALIDSLCKGR 381
Query: 424 XXXXXXXXVLNM---PIRPDDVIWKALLGACKMHGNVK-----MGERVARTL-MKLFPHD 474
M +RP+DV + L+ G + +GE V L + ++P++
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 475 S--GSYVALSNIFASRGNWVGVVEVRLK 500
S + +I A+ G ++ +L+
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLE 469
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 169/358 (47%), Gaps = 29/358 (8%)
Query: 67 KYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFP 126
K ++F + P +++NTII A+ + D + +E G M +G+V N+ T+
Sbjct: 245 KLIKEFSVKGIKPEAYTYNTIINAYVKQRD---FSGVE--GVLKVMKKDGVV-YNKVTYT 298
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
+++ K G++ + +++ + + G+++D V ++L+ G M+ A+LLF
Sbjct: 299 LLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK 358
Query: 187 FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVM 242
+ S+ + +IDG ++G++GA+ L N+M + V V +N +
Sbjct: 359 GLSPSS-------------YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 243 ISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGK-WVHLYAEKNE 301
I GY + G EA ++ M+ + T ++ +RL + K W+ E
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG- 464
Query: 302 IEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDAL 358
+++ V + +ID+Y K G+VE+A ++F ++ +K NAIT++ +I G+ +A
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 359 DYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
M+ G+ P Y L+ A ++E LF+ M + G++ Y M+
Sbjct: 525 KLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM-GLKGLDQNSVTYTVMI 581
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 137/320 (42%), Gaps = 34/320 (10%)
Query: 95 DDDDYKNPLEALGFFGQMC--SEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG 152
+D YK P+E LG C SE E F V + G +EG + ++VK G
Sbjct: 125 NDGFYKRPVEELGSAMVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKG 184
Query: 153 LDNDE------FVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVV 206
L DE VA+ R +C +E +F V ++ K+ V
Sbjct: 185 LSIDERSCIVFLVAAKKRRRIDLC--LE----IFRRMV----DSGVKIT---------VY 225
Query: 207 LWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAMDVFHDM 262
++++G R G++ S+KL + + + ++N +I+ Y + F V M
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSV 322
+ V N +T ++ + G + + + + IE D + +++I + G++
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 323 EKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGL 379
++A +F+++ K ++ T+ A+I G+ G A +MQ GV T VV+ L
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 380 LSACSHAGLIEEGRSLFNHM 399
+ G+++E +++ M
Sbjct: 406 IDGYCRKGMVDEASMIYDVM 425
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 146/328 (44%), Gaps = 30/328 (9%)
Query: 119 EPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYL 178
EPN TF +++ GR+ E E+ +V++G D + LV + G +A L
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 179 LFSNYVSH----------------FDNNSTKLVRN--KRMQEGVVVL----WNVMIDGFV 216
L V + + T L ++M+E + L ++++IDG
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 217 RLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
+ G + + LFN+M + +++++N++I G+ G + + + DM ++PN +
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
T ++ + + G L + +H I D + +++ID + K ++KA Q+ + +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 333 ENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLI 389
+K N T++ +I G R +D L+ +RKM GV V Y L+ G +
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 390 EEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
+ LF MV + P + Y ++D
Sbjct: 455 NVAKELFQEMVS-RKVPPNIVTYKILLD 481
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 26/279 (9%)
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
+ PN TF ++ + K G+++E +E+H ++ G+ D ++L+ +
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC--------- 379
Query: 178 LLFSNYVSHFD--NNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS 235
+H D N L+ +K + +N++I+G+ + I +LF KM R
Sbjct: 380 -----KENHLDKANQMVDLMVSKGCDPNIRT-FNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 236 VV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGK 291
VV ++N +I G+ + G A ++F +M V PN +T +L + G E
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 292 WVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE---NKKNAITWSAIIGGL 348
+ EK+++E+D + + +I V+ A +F + K T++ +IGGL
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553
Query: 349 AMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAG 387
G ++A +RKM++ G P Y L+ A H G
Sbjct: 554 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA--HLG 590
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 24/261 (9%)
Query: 209 NVMIDGFVRLGDI----GASRKLFNKMPQRSVVSWNVMISGYAQNGFFKEAMDVFHDM-Q 263
++MI+ F R + A K+ + + ++++ +I+G G EA+++ M +
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 264 MGDVSPNYITLVSVLPAISRLGA-----LELGKWVHLYAEKNEIEIDDVLGSAVIDMYAK 318
MG P+ IT+ +++ + G L + K V + N + V+++ K
Sbjct: 187 MGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY-----GPVLNVMCK 240
Query: 319 CGSVEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVV 375
G A+++ K+E K +A+ +S II GL HG ++A + + +M+ G+T +
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 376 YIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXX---XXV 432
Y L+ +AG ++G L M+K I P V + ++D +
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIK-RKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 433 LNMPIRPDDVIWKALL-GACK 452
++ I PD + + +L+ G CK
Sbjct: 360 IHRGIAPDTITYTSLIDGFCK 380
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 115/270 (42%), Gaps = 23/270 (8%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ ++ ++I F + + D N + L M S+G +PN TF ++ K RI
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDL-----MVSKG-CDPNIRTFNILINGYCKANRI 419
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
+G E+ + G+ D + L++ + G + A LF VS K+ N
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR------KVPPN- 472
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFKE 254
+V + +++DG G+ + ++F K+ + + +N++I G +
Sbjct: 473 ------IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
A D+F + + V P T ++ + + G L + + E++ D + +I
Sbjct: 527 AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 586
Query: 315 MYAKCGSVEKAIQVFEKIENKKNAITWSAI 344
+ G K++++ E+++ ++ S I
Sbjct: 587 AHLGDGDATKSVKLIEELKRCGFSVDASTI 616
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
+ PN T+ ++L A K G++ E KE+ +V++ +D D S+L+ + +++A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV 237
+F VS + VV +N +I+GF + + KLF +M QR +V
Sbjct: 316 QMFDLMVS-------------KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 238 S----WNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWV 293
S +N +I G+ Q G +A + F M +SP+ T +L + G LE +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 294 HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE---NKKNAITWSAIIGGLAM 350
+K E+++D V + VI K G VE+A +F + K + +T++ ++ GL
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 351 HGRANDALDYYRKMQQAGVTPTD 373
G ++ Y KM+Q G+ D
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKND 505
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 166/385 (43%), Gaps = 41/385 (10%)
Query: 49 LAAAEILKFLSVSDRRDLKY--ARKFFTQMNN----PNCFSWNTIIRAFAETDDDD---- 98
++ ++ + LS + RD+K A F+ M P+ +N ++ A + D
Sbjct: 47 VSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVIS 106
Query: 99 YKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEF 158
+E LG + + +TF V+ ++ I G ++KLG + D
Sbjct: 107 LGKKMEVLG----------IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV 156
Query: 159 VASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRL 218
+LV + + DA VS D K+V + +V +N +ID +
Sbjct: 157 TIGSLVNGFCRRNRVSDA-------VSLVD----KMVEIGYKPD--IVAYNAIIDSLCKT 203
Query: 219 GDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITL 274
+ + F ++ ++ +VV++ +++G + + +A + DM ++PN IT
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 275 VSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN 334
++L A + G + K + + I+ D V S++I+ +++A Q+F+ + +
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 335 K---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEE 391
K + ++++ +I G R D + +R+M Q G+ V Y L+ AG +++
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 392 GRSLFNHMVKVVGIEPRVEHYGCMV 416
+ F+ M GI P + Y ++
Sbjct: 384 AQEFFSQM-DFFGISPDIWTYNILL 407
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 101/247 (40%), Gaps = 42/247 (17%)
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLG----ALELGKWVHLYAEKNEI----- 302
+A+D+F DM P+ + +L AI +L + LGK + + +N++
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 303 --------------------------EIDDVLGSAVIDMYAKCGSVEKAIQVFEK---IE 333
E D V ++++ + + V A+ + +K I
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 334 NKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGR 393
K + + ++AII L R NDA D+++++++ G+ P V Y L++ ++ +
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 394 SLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXX---VLNMPIRPDDVIWKALLGA 450
L + M+K I P V Y ++D ++ M I PD V + +L+
Sbjct: 246 RLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 451 CKMHGNV 457
+H +
Sbjct: 305 LCLHDRI 311
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 149/354 (42%), Gaps = 69/354 (19%)
Query: 59 SVSDRRDLKYARKFFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCS 114
++ + +++ A FT+M+N PN ++N++IR +Y +A M
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-----NYGRWSDASRLLSDMI- 318
Query: 115 EGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVME 174
E + PN TF +++ A K G++ E ++++ ++K +D D F S+L+ + M ++
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 175 DAYLLFSNYVSH--FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP 232
+A +F +S F N VV +N +I GF + + +LF +M
Sbjct: 379 EAKHMFELMISKDCFPN---------------VVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 233 QRSVV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALE 288
QR +V ++ +I G+ Q A VF M V P+ +T
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY-------------- 469
Query: 289 LGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAII 345
S ++D G VE A+ VFE ++ K + T++ +I
Sbjct: 470 ---------------------SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 346 GGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
G+ G+ D D + + GV P V Y ++S GL EE +LF M
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 159/368 (43%), Gaps = 38/368 (10%)
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLE-ALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
N ++++ +I F ++ L AL +M G EP+ T S+L RI
Sbjct: 115 NLYTYSILINCFCR------RSQLSLALAVLAKMMKLG-YEPDIVTLNSLLNGFCHGNRI 167
Query: 139 QEGKEIHGFVVKLGLDNDEFV----------------ASNLVRMYAMCGVMED--AYLLF 180
+ + G +V++G D F A LV + G D Y +
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 181 SNYVSHFDNNSTKLVRNKRMQEGV----VVLWNVMIDGFVRLGDIGASRKLFNKMPQR-- 234
N + + L K+M++G VV++N +ID ++ + LF +M +
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 235 --SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKW 292
+VV++N +I G + +A + DM ++PN +T +++ A + G L +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 293 VHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLA 349
++ K I+ D S++I+ + +++A +FE + +K N +T++ +I G
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 350 MHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRV 409
R ++ ++ +R+M Q G+ V Y L+ A + + +F MV G+ P +
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS-DGVLPDI 466
Query: 410 EHYGCMVD 417
Y ++D
Sbjct: 467 MTYSILLD 474
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 139/321 (43%), Gaps = 22/321 (6%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
+A+ FG M P+ F +L A AKM + + + LG+ ++ + S L
Sbjct: 64 DAVNLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGA 223
+ + + A + + + K E +V N +++GF I
Sbjct: 123 INCFCRRSQLSLALAVLAKMM-------------KLGYEPDIVTLNSLLNGFCHGNRISD 169
Query: 224 SRKLFNKMP----QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
+ L +M Q ++N +I G ++ EA+ + M + P+ +T V+
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---K 336
+ + G ++L + E+ +IE V+ + +ID +V A+ +F +++NK
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 337 NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLF 396
N +T++++I L +GR +DA M + + P V + L+ A G + E L+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 397 NHMVKVVGIEPRVEHYGCMVD 417
+ M+K I+P + Y +++
Sbjct: 350 DEMIK-RSIDPDIFTYSSLIN 369
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 196/438 (44%), Gaps = 32/438 (7%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ F+++ + ++ + + ALG + G V+ N +T +L A K G+I
Sbjct: 317 PDAFTFSILFDGYSSNEKAE-----AALGVYETAVDSG-VKMNAYTCSILLNALCKEGKI 370
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
++ +EI G + GL +E + + ++ Y G + A + K
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIE-------------AMEK 417
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFKE 254
+ + + +N +I F LG++ + K NKM + SV ++N++I GY + F +
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
D+ +M+ PN ++ +++ + + L + V E + + + +ID
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 315 MYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
G +E A + +++ K N +T++ +I GL+M G+ ++A D ++ + G+ P
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXX 431
Y L+S AG ++ +L+ M K GI+P ++ Y ++
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEM-KRSGIKPTLKTYHLLISLCTKEGIELTERLF 656
Query: 432 VLNMPIRPDDVIWKALLGACKMHGNVKMGERVARTLM-KLFPHDSGSYVALSNIFASRGN 490
M ++PD +++ +L +HG+++ + + ++ K D +Y +++ +
Sbjct: 657 G-EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTY---NSLILGQLK 712
Query: 491 WVGVVEVRLKMKEMDVRK 508
+ EVR + EM+ R+
Sbjct: 713 VGKLCEVRSLIDEMNARE 730
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 165/412 (40%), Gaps = 74/412 (17%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ ++NT+I + + NP ++ +M ++ +EP+ TF ++LK K G +
Sbjct: 247 PSLITYNTLIDGYCKAG-----NPEKSFKVRERMKADH-IEPSLITFNTLLKGLFKAGMV 300
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMY-------AMCGVMEDAY------------LL 179
++ + + + LG D F S L Y A GV E A +L
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVV---VLWNVMIDGFVRLGDIGASRKLFNKMPQRSV 236
+ + + + M +G+V V++N MIDG+ R GD+ +R M ++ +
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 237 ----VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKW 292
+++N +I + + G + A + M++ VSP+
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS---------------------- 458
Query: 293 VHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLA 349
+E ++L I Y + +K + +++E+ N +++ +I L
Sbjct: 459 ---------VETYNIL----IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505
Query: 350 MHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRV 409
+ +A R M+ GV+P +Y L+ C G IE+ M+K GIE +
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK-KGIELNL 564
Query: 410 EHYGCMVDXXXXXXXXXXXXXXVLNMP---IRPDDVIWKALLGACKMHGNVK 458
Y ++D +L + ++PD + +L+ GNV+
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 8/219 (3%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFKEAMDVFH 260
V ++NV+IDG + + + +LF++M R S++++N +I GY + G +++ V
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 261 DMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCG 320
M+ + P+ IT ++L + + G +E + V + D S + D Y+
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 321 SVEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYI 377
E A+ V+E + K NA T S ++ L G+ A + + G+ P +V+Y
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 378 GLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
++ G + R M K G++P Y C++
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEK-QGMKPDHLAYNCLI 431
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 24/246 (9%)
Query: 194 LVRNKRMQEGVVVLWNVM--------------IDGFVRLGDIGASRKLFNKMPQR----S 235
LV+ K+ + + V N++ I V+L D+G +LFN+M S
Sbjct: 154 LVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPS 213
Query: 236 VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL 295
V +NV+I G + +A +F +M + P+ IT +++ + G E V
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHG 352
+ + IE + + ++ K G VE A V +++++ +A T+S + G + +
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 353 RANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFN-HMVKVVGIEPRVEH 411
+A AL Y +GV LL+A G IE+ + M K G+ P
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK--GLVPNEVI 391
Query: 412 YGCMVD 417
Y M+D
Sbjct: 392 YNTMID 397
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 139/291 (47%), Gaps = 27/291 (9%)
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
+ PN TF +L K G++QE E++ ++ G+ + + L+ Y M
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM-------- 335
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV 237
N +S +N +VRNK + +V + +I G+ + + K+F + +R +V
Sbjct: 336 ---QNRLSEANNMLDLMVRNKCSPD--IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 390
Query: 238 ----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWV 293
++++++ G+ Q+G K A ++F +M V P+ +T +L + G LE +
Sbjct: 391 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 450
Query: 294 HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAM 350
+K+++++ V+ + +I+ K G VE A +F + K N +T++ +I GL
Sbjct: 451 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 510
Query: 351 HGRANDALDYYRKMQQAGVTPTDVVYIGLLSA-------CSHAGLIEEGRS 394
G ++A RKM++ G P D Y L+ A + A LIEE +S
Sbjct: 511 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 561
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 158/345 (45%), Gaps = 27/345 (7%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ ++N+I+ + D AL +M E V+ + FT+ +++ + + G I
Sbjct: 181 PDVVTYNSIVNGICRSGDTSL-----ALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCI 234
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
+ + G+ + ++LVR G D LL + VS ++V N
Sbjct: 235 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR------EIVPN- 287
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFKE 254
V+ +NV++D FV+ G + + +L+ +M R +++++N ++ GY E
Sbjct: 288 ------VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 341
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
A ++ M SP+ +T S++ + ++ G V K + + V S ++
Sbjct: 342 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 401
Query: 315 MYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
+ + G ++ A ++F+++ + + +T+ ++ GL +G+ AL+ + +Q++ +
Sbjct: 402 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 461
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
V+Y ++ G +E+ +LF + G++P V Y M+
Sbjct: 462 GIVMYTTIIEGMCKGGKVEDAWNLFCSL-PCKGVKPNVMTYTVMI 505
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 148/349 (42%), Gaps = 35/349 (10%)
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
N ++ N +I F + A G++ G EP+ TF +++K G++
Sbjct: 112 NIYTLNIMINCFCRCCKTCF-----AYSVLGKVMKLG-YEPDTTTFNTLIKGLFLEGKVS 165
Query: 140 EGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKR 199
E + +V+ G D +++V N + + S L ++
Sbjct: 166 EAVVLVDRMVENGCQPDVVTYNSIV-----------------NGICRSGDTSLALDLLRK 208
Query: 200 MQE----GVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGF 251
M+E V ++ +ID R G I A+ LF +M + SVV++N ++ G + G
Sbjct: 209 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 268
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
+ + + DM ++ PN IT +L + G L+ ++ I + + +
Sbjct: 269 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 328
Query: 312 VIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
++D Y + +A + + + K + +T++++I G M R +D + +R + + G
Sbjct: 329 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 388
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
+ V Y L+ +G I+ LF MV G+ P V YG ++D
Sbjct: 389 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVS-HGVLPDVMTYGILLD 436
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 227 LFNKM----PQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAIS 282
LF +M P S+V ++ S A+ F +D +++ ++ N TL ++
Sbjct: 65 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 124
Query: 283 R-----LGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEK-IEN-- 334
R LGK + L E + + ++ ++ G V +A+ + ++ +EN
Sbjct: 125 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE-----GKVSEAVVLVDRMVENGC 179
Query: 335 KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRS 394
+ + +T+++I+ G+ G + ALD RKM++ V Y ++ + G I+ S
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239
Query: 395 LFNHMVKVVGIEPRVEHYGCMV 416
LF M + GI+ V Y +V
Sbjct: 240 LFKEM-ETKGIKSSVVTYNSLV 260
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 145/344 (42%), Gaps = 69/344 (20%)
Query: 69 ARKFFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
A FT+M N PN +++++I +Y+ +A M E + PN T
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLC-----NYERWSDASRLLSDMI-ERKINPNVVT 332
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
F +++ A K G++ E ++++ ++K +D D F S+L+ + M +++A +F +
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 185 SH--FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV----S 238
S F N VV +N +I+GF + I +LF +M QR +V +
Sbjct: 393 SKDCFPN---------------VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 239 WNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAE 298
+ +I G+ Q A VF M V PN +T
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY------------------------ 473
Query: 299 KNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRAN 355
+ ++D K G +EKA+ VFE ++ K T++ +I G+ G+
Sbjct: 474 -----------NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 356 DALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
D D + + GV P ++Y ++S GL EE +LF M
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 155/380 (40%), Gaps = 62/380 (16%)
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
N +++N +I F AL G+M G EP+ T S+L RI
Sbjct: 119 NLYTYNILINCFCRRSQISL-----ALALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRIS 172
Query: 140 EGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKR 199
+ + +V++G D + L+ + +A L V +R
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-------------QR 219
Query: 200 MQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP----QRSVVSWNVMISGYAQNGFFKEA 255
+ +V + V+++G + GDI + L NKM + +VV ++ +I + +A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 256 MDVFHDMQMGDVSPNYITLVSVL-------------------------PAISRLGAL--- 287
+++F +M+ V PN IT S++ P + AL
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 288 --ELGKWVH---LYAE--KNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---N 337
+ GK V LY E K I+ D S++I+ + +++A +FE + +K N
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 338 AITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFN 397
+T++ +I G R ++ ++ +R+M Q G+ V Y L+ A + + +F
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 398 HMVKVVGIEPRVEHYGCMVD 417
MV G+ P + Y ++D
Sbjct: 460 QMVS-DGVHPNIMTYNTLLD 478
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 140/321 (43%), Gaps = 22/321 (6%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
+A+G FG M + P+ F F +L A AKM + + + +LG+ ++ + + L
Sbjct: 68 DAIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGA 223
+ + + A L + K E +V + +++G+ I
Sbjct: 127 INCFCRRSQISLALALLGKMM-------------KLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 224 SRKLFNKMPQRS----VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
+ L ++M + +++ +I G + EA+ + M PN +T V+
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---K 336
+ + G ++L + E +IE + V+ S VID K + A+ +F ++ENK
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 337 NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLF 396
N IT+S++I L + R +DA M + + P V + L+ A G + E L+
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 397 NHMVKVVGIEPRVEHYGCMVD 417
+ M+K I+P + Y +++
Sbjct: 354 DEMIK-RSIDPDIFTYSSLIN 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 69 ARKFFTQMN----NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
A K + +M +P+ F+++++I F D D EA F M S+ PN T
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD-----EAKHMFELMISKDCF-PNVVT 402
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
+ +++ K RI EG E+ + + GL + + L+ + ++A ++F V
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 185 SH--------FDNNSTKLVRNKRMQEGVVVL--------------WNVMIDGFVRLGDIG 222
S ++ L +N ++++ +VV +N+MI+G + G +
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 223 ASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAMDVFHDMQ 263
LF + + V + +N MISG+ + G +EA +F M+
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 179/426 (42%), Gaps = 40/426 (9%)
Query: 5 CEPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRR 64
C+P T + L + ++ L ++ A I+ ++ + K+ V D
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 65 DLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
+L ++ T+ PN +++++I Y +A M E + PN T
Sbjct: 281 NL--FKEMETKGIRPNVVTYSSLISCLCS-----YGRWSDASQLLSDMI-EKKINPNLVT 332
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
F +++ A K G+ E ++++ ++K +D D F ++LV + M ++ A +F V
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 185 SH--FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV----S 238
S F + VV +N +I GF + + +LF +M R +V +
Sbjct: 393 SKDCFPD---------------VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 239 WNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAE 298
+ +I G +G A VF M V P+ +T +L + G LE V Y +
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 299 KNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE---NKKNAITWSAIIGGLAMHGRAN 355
K+EI++D + + +I+ K G V+ +F + K N +T++ +I GL
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 356 DALDYYRKMQQAGVTPTDVVYIGLLSA-------CSHAGLIEEGRSL-FNHMVKVVGIEP 407
+A +KM++ G P Y L+ A + A LI E RS F +G+
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 617
Query: 408 RVEHYG 413
+ H G
Sbjct: 618 NMLHDG 623
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 187/449 (41%), Gaps = 53/449 (11%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRD 65
+P T T T LF +++ + ++ A + L+ + + K R D
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK------RGD 236
Query: 66 LKYARKFFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPN 121
A +M P +NTII + YK+ +AL F +M ++G + PN
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK-----YKHMDDALNLFKEMETKG-IRPN 290
Query: 122 RFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFS 181
T+ S++ GR + + +++ ++ D F S L+ + G + +A L+
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 182 NYVSHFDNNST--------------KLVRNKRMQEGVV--------VLWNVMIDGFVRLG 219
V + S +L K+M E +V V +N +I GF +
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 220 DIGASRKLFNKMPQRSVV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLV 275
+ ++F +M QR +V ++N++I G Q G A ++F +M V PN +T
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 276 SVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE-- 333
++L + + G LE V Y +++++E + +I+ K G VE +F +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 334 -NKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSAC-------SH 385
K + + ++ +I G G +A +++M++ G P Y L+ A +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 386 AGLIEEGRSL-FNHMVKVVGIEPRVEHYG 413
A LI+E RS F +G+ + H G
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 153/346 (44%), Gaps = 27/346 (7%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
PN + ++++ + + K EA+ QM G +PN TF +++ +
Sbjct: 149 PNIVTLSSLLNGYCHS-----KRISEAVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKA 202
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
E + +V G D +V G + A+ L + +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK------------MEQG 250
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFKE 254
+++ GV++ +N +IDG + + + LF +M + +VV+++ +IS G + +
Sbjct: 251 KLEPGVLI-YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
A + DM ++P+ T +++ A + G L + ++ K I+ V S++I+
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 315 MYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
+ +++A Q+FE + +K + +T++ +I G + R + ++ +R+M Q G+
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
V Y L+ AG + + +F MV G+ P + Y ++D
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVS-DGVPPNIMTYNTLLD 474
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 156/393 (39%), Gaps = 79/393 (20%)
Query: 82 FSWNTIIRAFAETDDDDYKNPL-----------EALGFFGQMCSEGLVEPNRFTFPSVLK 130
F W RAF+ DY+ L +A+ FG+M P+ F +L
Sbjct: 34 FFWR---RAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPF-PSIIEFSKLLS 89
Query: 131 ACAKMGR----IQEGKEIH-------------------------------GFVVKLGLDN 155
A AKM + I G+++ G ++KLG +
Sbjct: 90 AIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP 149
Query: 156 DEFVASNLVRMYAMCGVMEDAYLLFSN-YVSHFDNNSTK-------LVRNKRMQEGV--- 204
+ S+L+ Y + +A L +V+ + N+ L + + E +
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 205 -----------VVLWNVMIDGFVRLGDIGASRKLFNKMPQ----RSVVSWNVMISGYAQN 249
+V + V+++G + GD + L NKM Q V+ +N +I G +
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 250 GFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG 309
+A+++F +M+ + PN +T S++ + G + + +I D
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQ 366
SA+ID + K G + +A ++++++ + + +T+S++I G MH R ++A + M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 367 AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
P V Y L+ +EEG +F M
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 111/267 (41%), Gaps = 31/267 (11%)
Query: 208 WNVMIDGFVRLGDIGASRKLFNKMP----QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQ 263
++++I+ F R + + + KM + ++V+ + +++GY + EA+ + M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 264 MGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA----------VI 313
+ PN +T +++ G ++H A + ID ++ V+
Sbjct: 179 VTGYQPNTVTFNTLIH----------GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 314 DMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
+ K G + A + K+E K + ++ II GL + +DAL+ +++M+ G+
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXX 430
P V Y L+S + G + L + M++ I P V + ++D
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 431 XVLNM---PIRPDDVIWKALLGACKMH 454
M I P V + +L+ MH
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMH 374
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 158/376 (42%), Gaps = 42/376 (11%)
Query: 59 SVSDRRDLKYARKFFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCS 114
S+ R + A F +M PN +++++I Y +A M
Sbjct: 193 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS-----YGRWSDASQLLSDMI- 246
Query: 115 EGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVME 174
E + PN TF +++ A K G+ E +++H ++K +D D F ++L+ + M ++
Sbjct: 247 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 306
Query: 175 DAYLLFSNYVSH--FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP 232
A +F VS F + T +N +I GF + + +LF +M
Sbjct: 307 KAKQMFEFMVSKDCFPDLDT---------------YNTLIKGFCKSKRVEDGTELFREMS 351
Query: 233 QRSVV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALE 288
R +V ++ +I G +G A VF M V P+ +T +L + G LE
Sbjct: 352 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 411
Query: 289 LGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE---NKKNAITWSAII 345
V Y +K+EI++D + + +I+ K G V+ +F + K N +T++ +I
Sbjct: 412 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 471
Query: 346 GGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA-------CSHAGLIEEGRSL-FN 397
GL +A +KM++ G P Y L+ A + A LI E RS F
Sbjct: 472 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 531
Query: 398 HMVKVVGIEPRVEHYG 413
+G+ + H G
Sbjct: 532 GDASTIGLVANMLHDG 547
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 155/381 (40%), Gaps = 60/381 (15%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ F +N ++ A A+ D + +L G+M G EP+ T S+L RI
Sbjct: 40 PSIFEFNKLLSAIAKMKKFDL---VISLALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRI 95
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
+ + +V++G D + L+ + +A L V +
Sbjct: 96 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-------------Q 142
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP----QRSVVSWNVMISGYAQNGFFKE 254
R + +V + V+++G + GDI + L NKM + VV +N +I + +
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLG----ALEL--------------------- 289
A+++F +M+ + PN +T S++ + G A +L
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262
Query: 290 -----GKWV-----HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK--- 336
GK+V H K I+ D +++I+ + ++KA Q+FE + +K
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322
Query: 337 NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLF 396
+ T++ +I G R D + +R+M G+ V Y L+ H G + + +F
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382
Query: 397 NHMVKVVGIEPRVEHYGCMVD 417
MV G+ P + Y ++D
Sbjct: 383 KQMVS-DGVPPDIMTYSILLD 402
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 127/322 (39%), Gaps = 26/322 (8%)
Query: 220 DIGASRKLFNKMP----QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLV 275
D+ S L KM + S+V+ + +++GY +A+ + M P+ IT
Sbjct: 59 DLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 118
Query: 276 SVLPAI------SRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF 329
+++ + S AL + + V + N + V++ K G ++ A +
Sbjct: 119 TLIHGLFLHNKASEAVAL-VDRMVQRGCQPNLVTY-----GVVVNGLCKRGDIDLAFNLL 172
Query: 330 EKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHA 386
K+E K + + ++ II L + +DAL+ +++M+ G+ P V Y L+S
Sbjct: 173 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 232
Query: 387 GLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXX---VLNMPIRPDDVI 443
G + L + M++ I P + + ++D ++ I PD
Sbjct: 233 GRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 291
Query: 444 WKALLGACKMHGNVKMGERVARTLMK--LFPHDSGSYVALSNIFASRGNWVGVVEVRLKM 501
+ +L+ MH + +++ ++ FP D +Y L F E+ +M
Sbjct: 292 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFP-DLDTYNTLIKGFCKSKRVEDGTELFREM 350
Query: 502 KEMDVRKDPGCSWIEIDGVIHE 523
+ D I G+ H+
Sbjct: 351 SHRGLVGDTVTYTTLIQGLFHD 372
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 160/399 (40%), Gaps = 63/399 (15%)
Query: 19 LFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM-- 76
L RC + IK G + +L DR + A F QM
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR--VYDALYMFDQMVG 179
Query: 77 --NNPNCFSWNTIIRAFAETDDDDYKNPLEAL----------------GFFGQMCSEGL- 117
PN +NTII ++ D N L+ L +CS G
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVD--NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 118 --------------VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
+ P+ FTF +++ AC K GR+ E +E + +++ LD D S L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 164 VRMYAMCGVMEDAYLLFSNYVSH--FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDI 221
+ M +++A +F VS F + VV ++++I+G+ + +
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPD---------------VVTYSILINGYCKSKKV 342
Query: 222 GASRKLFNKMPQRSVV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSV 277
KLF +M QR VV ++ ++I GY + G A ++F M V PN IT +
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Query: 278 LPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK-- 335
L + G +E + +KN ++ D V + +I K G V A ++ + +
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 336 -KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTD 373
+ T++ ++ GL G +A +RKM++ G+ P +
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 156/384 (40%), Gaps = 40/384 (10%)
Query: 211 MIDGFVRLGDIGASRKLFNKM----PQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD 266
M+ +R + S LF M P S+ ++ ++S ++ + + ++ MQM
Sbjct: 52 MLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 267 VSPNYITLVSVLPAISRLGALEL-----GKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
+ N T +L R L L GK + L E + + +L + +
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG-----FCRGDR 166
Query: 322 VEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIG 378
V A+ +F+++ K N + ++ II GL + ++ALD +M++ G+ P V Y
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 379 LLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIR 438
L+S +G + + + M K I P V + ++D M R
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTK-REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 439 ---PDDVIWKALLGACKMHGNVKMGERVARTLMK--LFPHDSGSYVALSNIFASRGNWVG 493
PD V + L+ M+ + E + ++ FP D +Y L N +
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP-DVVTYSILINGYCKSKKVEH 344
Query: 494 VVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEIRSMLEEISNRIRSAGY 553
+++ +M + V ++ V + L+ + + RA ++ ++ EEI R+ G
Sbjct: 345 GMKLFCEMSQRGVVRNT---------VTYTILI--QGYCRAGKL-NVAEEIFRRMVFCGV 392
Query: 554 RPNIT--QVLLN--MDEEKKESAL 573
PNI VLL+ D K E AL
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKAL 416
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 158/363 (43%), Gaps = 65/363 (17%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
+ALG +M SE V P+ T+ ++LKA +K GR+ + KE+ + K GL + +NL
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 164 VRMYAMCGVMEDAYLLF-----SNYVSHFDNNS---TKLVRNKRMQEGV----------- 204
V Y G +++A+ + +N + + L M+EG+
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341
Query: 205 ---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV------------------------- 236
VV +N +IDG LG +RKL +M V
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTR 401
Query: 237 ---------------VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAI 281
V+++ +I Y + G A+++ +M + N ITL ++L A+
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Query: 282 SRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NA 338
+ L+ + A K +D+V +I + + VEKA++++++++ K
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521
Query: 339 ITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNH 398
T++++IGGL HG+ A++ + ++ ++G+ P D + ++ G +E+ +N
Sbjct: 522 STFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Query: 399 MVK 401
+K
Sbjct: 582 SIK 584
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 139/336 (41%), Gaps = 47/336 (13%)
Query: 102 PLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR---IQEGKEIHGFVVKLGLDNDEF 158
P AL F +M L +PN T ++L + I +E+ +VK+G+ +
Sbjct: 147 PHVALQIFQKMIRLKL-KPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQ 205
Query: 159 VASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRM------------------ 200
+ LV Y + G +EDA + VS F N + N +
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265
Query: 201 --QEGVV---VLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV----SWNVMISGYAQNGF 251
+ G+V V +N ++ G+ +LG + + ++ M Q +V+ ++N++I+G G
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
+E +++ M+ + P+ +T +++ G ELG + ++E D V +
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLID-----GCFELGLSLEARKLMEQMENDGVKANQ 380
Query: 312 V---IDMYAKCGSVEKAIQVFEKIEN-------KKNAITWSAIIGGLAMHGRANDALDYY 361
V I + C EK V K++ + +T+ +I G + AL+
Sbjct: 381 VTHNISLKWLCKE-EKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439
Query: 362 RKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFN 397
R+M Q G+ + +L A ++E +L N
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 184/434 (42%), Gaps = 78/434 (17%)
Query: 41 KTGLIGDPLAAAEILKFLSVSDRRD--LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDD 98
K G + + + ++ LS +R + L+ + F P+ ++N +I + D +
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 99 YKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKE--------------- 143
EA +M G P+ T+ ++ K+GR+ K+
Sbjct: 305 -----EAAKMVNRMLIRGFA-PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 144 -IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKL-------V 195
IHGFV LD+ + V S++V Y G++ D S ++ L +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSY---GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 196 RNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP----QRSVVSWNVMISGYAQNGF 251
RNK + V + +++DGF +LG I + + N+M + + V +N +IS + +
Sbjct: 416 RNKGCKPNVYS-YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKW------------------- 292
EA+++F +M P+ T S++ + + ++ W
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 293 -VHLYAEKNEIE---------------IDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK 336
++ + + EI+ +D++ +++I + G V+KA +FEK+
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 337 NA---ITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGR 393
+A I+ + +I GL G +A+++ ++M G TP V + L++ AG IE+G
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 394 SLFNHMVKVVGIEP 407
++F + + GI P
Sbjct: 655 TMFRKL-QAEGIPP 667
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 145/345 (42%), Gaps = 63/345 (18%)
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCG------ 171
+ P FTF V+KA + I + + K G + + L+ + C
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 172 -VMEDAYLL--------FSNYV---SHFD--NNSTKLVRNKRMQEGVV---VLWNVMIDG 214
++E+ +L+ F++ + FD N + K+V N+ + G + + +++G
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV-NRMLIRGFAPDDITYGYLMNG 331
Query: 215 FVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQN------------------------- 249
++G + A++ LF ++P+ +V +N +I G+ +
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 250 ------GFFKE-----AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAE 298
G++KE A++V HDM+ PN + ++ +LG ++ V
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 299 KNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRAN 355
+ ++ + V + +I + K + +A+++F ++ K + T++++I GL
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 356 DALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMV 400
AL R M GV V Y L++A G I+E R L N MV
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 132/298 (44%), Gaps = 39/298 (13%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
PN +S+ ++ F + D EA +M ++GL +PN F ++ A K RI
Sbjct: 422 PNVYSYTILVDGFCKLGKID-----EAYNVLNEMSADGL-KPNTVGFNCLISAFCKEHRI 475
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF-----------SNYVSHF 187
E EI + + G D + ++L+ +C V E + L+ +N V++
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 188 D-----------NNSTKLVRNKRMQEGVV--VLWNVMIDGFVRLGDIGASRKLFNKMPQR 234
+ KLV Q + + +N +I G R G++ +R LF KM +
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 235 ----SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG 290
S +S N++I+G ++G +EA++ +M + +P+ +T S++ + R G +E G
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 291 KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVF-EKIENK--KNAITWSAII 345
+ + I D V + ++ K G V A + E IE+ N TWS ++
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
Query: 238 SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYA 297
S+NV++ K A +VF+DM + P T V+ A + ++ +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 298 EKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI---ENKKNAITWSAIIGGLAMHGRA 354
K+ + V+ +I +KC V +A+Q+ E++ +A T++ +I GL R
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 355 NDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
N+A +M G P D+ Y L++ G ++ + LF + K
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 145/329 (44%), Gaps = 26/329 (7%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ ++N +I + E + Q + P T+ +VL K GR
Sbjct: 191 PDVATFNILINVLCA------EGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
+ E+ + G+D D + L+ + YLL + K
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM-------------RK 291
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKE 254
RM V +N +I+GF G + + +L N+M + V++N +I G+ G FKE
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
A+ +F+ M+ ++P+ ++ +L + + +L + ++ ++N + + + + +ID
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 315 MYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
K G +++A+ + ++ + +T+SA+I G GR A + ++ + G++P
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMV 400
++Y L+ C G ++E ++ M+
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMI 500
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 188/458 (41%), Gaps = 46/458 (10%)
Query: 29 IKQLKQIHAHFIKTGLIGDPLAAAEILKFLSV-SDRRDLKYARKFFT-QMNNPNCFSWNT 86
I QL I H + + DP A ILK LS+ S + + T ++ N N ++
Sbjct: 71 IVQLVCITTHILVRARMYDP--ARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDI 128
Query: 87 IIRAFA-ETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIH 145
+IR + E D +G +G P+ +T ++L
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYG-------FNPSVYTCNAIL---------------- 165
Query: 146 GFVVKLGLDND--EFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEG 203
G VVK G D F+ L R +C + +L + + + + K + G
Sbjct: 166 GSVVKSGEDVSVWSFLKEMLKR--KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG 223
Query: 204 ---VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAM 256
+V +N ++ + + G A+ +L + M + V ++N++I ++ +
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 283
Query: 257 DVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
+ DM+ + PN +T +++ S G + + + + + V +A+ID +
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Query: 317 AKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTD 373
G+ ++A+++F +E K + +++ ++ GL + + A +Y +M++ GV
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVL 433
+ Y G++ G ++E L N M K GI+P + Y +++ V
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSK-DGIDPDIVTYSALINGFCKVGRFKTAKEIVC 462
Query: 434 NM---PIRPDDVIWKALLGACKMHGNVKMGERVARTLM 468
+ + P+ +I+ L+ C G +K R+ ++
Sbjct: 463 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 500
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 154/379 (40%), Gaps = 71/379 (18%)
Query: 70 RKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVL 129
R +M +PN ++NT+I F+ + L A +M S GL PN TF +++
Sbjct: 287 RDMRKRMIHPNEVTYNTLINGFS-----NEGKVLIASQLLNEMLSFGL-SPNHVTFNALI 340
Query: 130 KACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDN 189
G +E ++ + GL E GV+ D L N + FD
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSY----------GVLLDG--LCKN--AEFDL 386
Query: 190 NSTKLVRNKRMQEGVVV---LWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVM 242
+R KR GV V + MIDG + G + + L N+M + + V+++ +
Sbjct: 387 ARGFYMRMKR--NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444
Query: 243 ISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLY------ 296
I+G+ + G FK A ++ + +SPN I +++ R+G L+ + + +Y
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK--EAIRIYEAMILE 502
Query: 297 ----------------------AEKNE----IEIDDVLGSAV-----IDMYAKCGSVEKA 325
AE E + D +L + V I+ Y G KA
Sbjct: 503 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562
Query: 326 IQVFE---KIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSA 382
VF+ K+ + T+ +++ GL G +A + + + V+Y LL+A
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 622
Query: 383 CSHAGLIEEGRSLFNHMVK 401
+G + + SLF MV+
Sbjct: 623 MCKSGNLAKAVSLFGEMVQ 641
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 103/534 (19%), Positives = 203/534 (38%), Gaps = 53/534 (9%)
Query: 17 SSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM 76
S+L R +K+ +I+ I G D ++ L + + + A +F M
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK--VAEAEEFMRCM 534
Query: 77 NN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKAC 132
+ PN S++ +I + + + L+A F +M G P FT+ S+LK
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEG-----LKAFSVFDEMTKVGH-HPTFFTYGSLLKGL 588
Query: 133 AKMGRIQEG----KEIHGF--VVKLGLDNDEFVA----SNLVRMYAMCGVMEDAYLLFSN 182
K G ++E K +H V + N A NL + ++ G M +L +
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Query: 183 YVSHFDNNSTKLVRNKRMQEGVV---------------VLWNVMIDGFVRLGDIGASRKL 227
Y + + + L R + ++ V++ +DG + G A
Sbjct: 649 YT--YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 706
Query: 228 FNKMPQRS----VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISR 283
+M +V+ N MI GY++ G ++ D+ +M + PN T +L S+
Sbjct: 707 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK 766
Query: 284 LGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAI---T 340
+ ++ N I D + +++ + +E +++ + + + T
Sbjct: 767 RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 826
Query: 341 WSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMV 400
++ +I +G N A D + M G++ ++S + +E R + + M
Sbjct: 827 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886
Query: 401 KVVGIEPRVEHYGCMVDXXXXX---XXXXXXXXXVLNMPIRPDDVIWKALLGACKMHGNV 457
K GI P Y +++ ++ I P +V A++ A G
Sbjct: 887 K-QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 945
Query: 458 KMGERVARTL--MKLFPHDSGSYVALSNIFASRGNWVGVVEVRLKMKEMDVRKD 509
+ R + MKL P S+ L ++ GN + +E+R+ M ++ D
Sbjct: 946 DEATLLLRFMLKMKLVP-TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 163/346 (47%), Gaps = 27/346 (7%)
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
P+ S++T++ + + D + M +GL +PN + + S++ ++ +
Sbjct: 721 TPDVISYSTVVNGYCRFGELD-----KVWKLIEVMKRKGL-KPNSYIYGSIIGLLCRICK 774
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
+ E +E +++ G+ D V + L+ + G + A F ++ +S + +
Sbjct: 775 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF------YEMHSRDITPD 828
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFK 253
V+ + +I GF ++GD+ + KLF++M + + V++ +I+GY + G K
Sbjct: 829 -------VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVI 313
+A V + M SPN +T +++ + + G L+ + K ++ + ++++
Sbjct: 882 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941
Query: 314 DMYAKCGSVEKAIQV---FEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
+ K G++E+A+++ FE + +T++ ++ G + A + ++M G+
Sbjct: 942 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 1001
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
PT V + L++ G++E+G L N M+ GI P + +V
Sbjct: 1002 PTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLV 1046
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 144/305 (47%), Gaps = 21/305 (6%)
Query: 120 PNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL 179
P+ ++ +V+ + G + + ++ + + GL + ++ +++ + + +A
Sbjct: 722 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 781
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS---- 235
FS +++R + + VV + +IDGF + GDI A+ K F +M R
Sbjct: 782 FS-----------EMIRQGILPDTVV--YTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 828
Query: 236 VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL 295
V+++ +ISG+ Q G EA +FH+M + P+ +T ++ + G ++ VH
Sbjct: 829 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 888
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFE---KIENKKNAITWSAIIGGLAMHG 352
+ + + V + +ID K G ++ A ++ KI + N T+++I+ GL G
Sbjct: 889 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 948
Query: 353 RANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHY 412
+A+ + + AG+ V Y L+ A +G +++ + + M+ G++P + +
Sbjct: 949 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTF 1007
Query: 413 GCMVD 417
+++
Sbjct: 1008 NVLMN 1012
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 26/244 (10%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILK-FLSVSDRRDLKYARKFFTQMN-NPNCFSWNTIIRA 90
K H F K GL D + E++ + +D Q +PN ++ T+I
Sbjct: 850 KLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 908
Query: 91 FAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVK 150
+ D D N L +M GL +PN FT+ S++ K G I+E ++ G
Sbjct: 909 LCKEGDLDSANEL-----LHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 151 LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNV 210
GL+ D + L+ Y G M+ A + K + K +Q +V +NV
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEIL------------KEMLGKGLQPTIVT-FNV 1009
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAMDVFHDMQMGD 266
+++GF G + KL N M + + ++N ++ Y K A ++ DM
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069
Query: 267 VSPN 270
V P+
Sbjct: 1070 VGPD 1073
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 235 SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALE------ 288
+V S+N++I Q G KEA + M++ +P+ I+ +V+ R G L+
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 289 -------LGKWVHLY-------------AEKNE---------IEIDDVLGSAVIDMYAKC 319
L ++Y AE E I D V+ + +ID + K
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807
Query: 320 GSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
G + A + F ++ ++ + +T++AII G G +A + +M G+ P V +
Sbjct: 808 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
L++ AG +++ + NHM++ G P V Y ++D
Sbjct: 868 TELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLID 907
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 163/346 (47%), Gaps = 27/346 (7%)
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
P+ S++T++ + + D + M +GL +PN + + S++ ++ +
Sbjct: 721 TPDVISYSTVVNGYCRFGELD-----KVWKLIEVMKRKGL-KPNSYIYGSIIGLLCRICK 774
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
+ E +E +++ G+ D V + L+ + G + A F ++ +S + +
Sbjct: 775 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF------YEMHSRDITPD 828
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFK 253
V+ + +I GF ++GD+ + KLF++M + + V++ +I+GY + G K
Sbjct: 829 -------VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVI 313
+A V + M SPN +T +++ + + G L+ + K ++ + ++++
Sbjct: 882 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941
Query: 314 DMYAKCGSVEKAIQV---FEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
+ K G++E+A+++ FE + +T++ ++ G + A + ++M G+
Sbjct: 942 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 1001
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
PT V + L++ G++E+G L N M+ GI P + +V
Sbjct: 1002 PTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLV 1046
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 144/305 (47%), Gaps = 21/305 (6%)
Query: 120 PNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL 179
P+ ++ +V+ + G + + ++ + + GL + ++ +++ + + +A
Sbjct: 722 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 781
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS---- 235
FS +++R + + VV + +IDGF + GDI A+ K F +M R
Sbjct: 782 FS-----------EMIRQGILPDTVV--YTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 828
Query: 236 VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL 295
V+++ +ISG+ Q G EA +FH+M + P+ +T ++ + G ++ VH
Sbjct: 829 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 888
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFE---KIENKKNAITWSAIIGGLAMHG 352
+ + + V + +ID K G ++ A ++ KI + N T+++I+ GL G
Sbjct: 889 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 948
Query: 353 RANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHY 412
+A+ + + AG+ V Y L+ A +G +++ + + M+ G++P + +
Sbjct: 949 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTF 1007
Query: 413 GCMVD 417
+++
Sbjct: 1008 NVLMN 1012
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 26/244 (10%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILK-FLSVSDRRDLKYARKFFTQMN-NPNCFSWNTIIRA 90
K H F K GL D + E++ + +D Q +PN ++ T+I
Sbjct: 850 KLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 908
Query: 91 FAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVK 150
+ D D N L +M GL +PN FT+ S++ K G I+E ++ G
Sbjct: 909 LCKEGDLDSANEL-----LHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 151 LGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNV 210
GL+ D + L+ Y G M+ A + K + K +Q +V +NV
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEIL------------KEMLGKGLQPTIVT-FNV 1009
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAMDVFHDMQMGD 266
+++GF G + KL N M + + ++N ++ Y K A ++ DM
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069
Query: 267 VSPN 270
V P+
Sbjct: 1070 VGPD 1073
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 235 SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALE------ 288
+V S+N++I Q G KEA + M++ +P+ I+ +V+ R G L+
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 289 -------LGKWVHLY-------------AEKNE---------IEIDDVLGSAVIDMYAKC 319
L ++Y AE E I D V+ + +ID + K
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807
Query: 320 GSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
G + A + F ++ ++ + +T++AII G G +A + +M G+ P V +
Sbjct: 808 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
L++ AG +++ + NHM++ G P V Y ++D
Sbjct: 868 TELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLID 907
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/403 (19%), Positives = 173/403 (42%), Gaps = 71/403 (17%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
PN + N ++ ++ D EA F +M + P+ TF S++ K+GR+
Sbjct: 410 PNVRTVNIMVDRLCKSQKLD-----EACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLV--- 195
+ +++ ++ + V ++L++ + G ED + ++ + ++ + +L+
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 196 -----------RNKRMQEGVVVL--------WNVMIDGFVRLGDIGASRKLFNKMPQRSV 236
+ + M E + ++++I G ++ G + +LF M ++
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 237 V----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKW 292
V ++N++I G+ + G +A + +M+ P +T SV+ ++++ L+
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 293 VHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK----------------- 335
+ A+ IE++ V+ S++ID + K G +++A + E++ K
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Query: 336 ---------------------KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
N +T+ +I GL + N A ++++MQ+ G+ P+ +
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
Y ++S + AG I E +LF+ K G P Y M++
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRF-KANGGVPDSACYNAMIE 805
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 178/422 (42%), Gaps = 44/422 (10%)
Query: 13 PTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAE-ILKFLSVSDRRD----LK 67
P +SL +ARC++ L QI G E +L + + R+ ++
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQ 157
Query: 68 YARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPS 127
RKF + P ++ T+I AF+ + D L F QM G EP F +
Sbjct: 158 MMRKFKFR---PAFSAYTTLIGAFSAVNHSDM-----MLTLFQQMQELGY-EPTVHLFTT 208
Query: 128 VLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF----SNY 183
+++ AK GR+ + + LD D + + + + G ++ A+ F +N
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 184 VSHFDNNSTKLV----RNKRMQEGVVVL--------------WNVMIDGFVRLGDIGASR 225
+ + T ++ + R+ E V + +N MI G+ G +
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 226 KLFNKMPQR----SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAI 281
L + + SV+++N +++ + G EA+ VF +M+ D +PN T ++ +
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDML 387
Query: 282 SRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNA 338
R G L+ + +K + + + ++D K +++A +FE+++ K +
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 339 ITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNH 398
IT+ ++I GL GR +DA Y KM + +VY L+ + G E+G ++
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 399 MV 400
M+
Sbjct: 508 MI 509
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/333 (18%), Positives = 134/333 (40%), Gaps = 65/333 (19%)
Query: 71 KFFTQMNNPNCF----SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFP 126
+ F M C ++N +I F + + +A +M ++G EP T+
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN-----KAYQLLEEMKTKGF-EPTVVTYG 626
Query: 127 SVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH 186
SV+ AK+ R+ E + ++ + + S+L+ + G +++AYL+
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE----- 681
Query: 187 FDNNSTKLVRNKRMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSW 239
+ MQ+G+ + WN ++D V+ +I + F M + V++
Sbjct: 682 -----------ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 240 NVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEK 299
++I+G + F +A + +MQ + P+ I+ +++ +++ G + AE
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI---------AE- 780
Query: 300 NEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALD 359
A+ D + G V ++ ++A+I GL+ RA DA
Sbjct: 781 ---------AGALFDRFKANGGV-------------PDSACYNAMIEGLSNGNRAMDAFS 818
Query: 360 YYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
+ + ++ G+ + + LL +E+
Sbjct: 819 LFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 159/341 (46%), Gaps = 46/341 (13%)
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFP---SVLKACAKMG 136
N +NT+++ A+ D +A+ F +M G PN +T+ ++L A ++
Sbjct: 304 NVVGYNTLMQVLAKGKMVD-----KAIQVFSRMVETG-CRPNEYTYSLLLNLLVAEGQLV 357
Query: 137 RIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSN------------YV 184
R+ EI + G + S LVR + G + +A+ LF + Y+
Sbjct: 358 RLDGVVEISKRYMTQG------IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYM 411
Query: 185 SHFDN--NSTKLVRNKRM-----QEGVV---VLWNVMIDGFVRLGDIGASRKLFNKM--- 231
S ++ + K + M ++GVV +++N + +L I LF KM
Sbjct: 412 SMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 232 -PQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG 290
P + ++N++I+ + + G EA+++F +++ D P+ I+ S++ + + G ++
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 291 KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGG 347
++ + D V S +++ + K VE A +FE++ K N +T++ ++
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591
Query: 348 LAMHGRANDALDYYRKMQQAGVTPTDVVYIGL--LSACSHA 386
L +GR +A+D Y KM+Q G+TP + Y L L + SH
Sbjct: 592 LEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHG 632
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 158/360 (43%), Gaps = 34/360 (9%)
Query: 69 ARKFFTQMNNPNC----FSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
A + F M +C +++ +IR D EA+G F +M +EGL N
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCD-----EAVGLFNEMITEGLT-LNVVG 307
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
+ ++++ AK + + ++ +V+ G +E+ S L+ + V E + V
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLL----VAEGQLVRLDGVV 363
Query: 185 SHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV----SWN 240
+ + M +G+ ++ ++ +LG + + +LF M V S+
Sbjct: 364 E---------ISKRYMTQGI---YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYM 411
Query: 241 VMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKN 300
M+ G EA+++ + V + + +V A+ +L + + +K+
Sbjct: 412 SMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 301 EIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDA 357
D + +I + + G V++AI +FE++E K + I+++++I L +G ++A
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 358 LDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
+++MQ+ G+ P V Y L+ +E SLF M+ V G +P + Y ++D
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEML-VKGCQPNIVTYNILLD 590
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 184/412 (44%), Gaps = 35/412 (8%)
Query: 6 EPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDR-- 63
EP+ T SSL +C +++ ++ IK G D + ++ LS
Sbjct: 423 EPSIVTY----SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 64 RDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRF 123
++++ K Q N +N++I + + D EAL F M G ++P+
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD-----EALKVFRLMGIYG-IKPDVA 532
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
TF +V++ GR++E + + K+GL+ D L+ A C M+ L
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID--AFCKHMKPTIGL---- 586
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKM----PQRSVVSW 239
FD + RNK + + + NV+I + I + K FN + + +V++
Sbjct: 587 -QLFD----LMQRNKISAD--IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 240 NVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG-KWVHLYAE 298
N MI GY EA +F +++ PN +TL ++ + + ++ + + AE
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 299 KNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRAN 355
K + + V ++D ++K +E + ++FE+++ K + +++S II GL GR +
Sbjct: 700 KGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 356 DALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEP 407
+A + + + A + P V Y L+ G + E L+ HM++ G++P
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR-NGVKP 809
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 114/230 (49%), Gaps = 8/230 (3%)
Query: 232 PQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGK 291
P +VV++ +I+G+ + G A D+F M+ + P+ I +++ + G L +G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 292 WVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGL 348
+ A +++D V+ S+ ID+Y K G + A V++++ + N +T++ +I GL
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 349 AMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPR 408
GR +A Y ++ + G+ P+ V Y L+ G + G +L+ M+K +G P
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPD 460
Query: 409 VEHYGCMVDXXX---XXXXXXXXXXXVLNMPIRPDDVIWKALL-GACKMH 454
V YG +VD +L IR + V++ +L+ G C+++
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 136/308 (44%), Gaps = 26/308 (8%)
Query: 109 FGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYA 168
+ +M +G + PN T+ ++K + GRI E ++G ++K G++ S+L+ +
Sbjct: 379 YKRMLCQG-ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 169 MCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLF 228
CG + + L+ + + K VV++ V++DG + G + + +
Sbjct: 438 KCGNLRSGFALYEDMI-------------KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 229 NKMPQRS----VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRL 284
KM +S VV +N +I G+ + F EA+ VF M + + P+ T +V+
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 285 GALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAI 344
G LE ++ K +E D + +ID + K +Q+F+ ++ +N I+
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ--RNKISADIA 602
Query: 345 IGGLAMH-----GRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
+ + +H R DA ++ + + + P V Y ++ ++E +F +
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-EL 661
Query: 400 VKVVGIEP 407
+KV P
Sbjct: 662 LKVTPFGP 669
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 150/374 (40%), Gaps = 68/374 (18%)
Query: 109 FGQMCSEGLVEPNRFTFPS-VLKACAKMGRIQEGKEIH------GFVVKL--------GL 153
F ++C G +EP+ + VL A G + + + H GF V + GL
Sbjct: 204 FDKLCRGG-IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL 262
Query: 154 DNDEF-VASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTK-------LVRNKRMQEGVV 205
D+ VAS L+ + CG + + F ++ F V +R E +
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNV-VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 206 VLWNVMIDGFVRLGDIGASRKLFNKMPQRS----VVSWNVMISGYAQNGFFKEAMDVFHD 261
+ ++ +IDG+ + G +G KLF++ + VV ++ I Y ++G A V+
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 262 MQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGS 321
M +SPN +T ++ + + G + ++ K +E V S++ID + KCG+
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 322 VEKAIQVFE---KIENKKNAITWSAIIGGLAMHG-------------------------- 352
+ ++E K+ + + + ++ GL+ G
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 353 ---------RANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVV 403
R ++AL +R M G+ P + ++ G +EE LF M K +
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-M 560
Query: 404 GIEPRVEHYGCMVD 417
G+EP Y ++D
Sbjct: 561 GLEPDALAYCTLID 574
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 96/213 (45%), Gaps = 18/213 (8%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
+A FF + EG +EP+ T+ +++ + R+ E + I + + + L
Sbjct: 619 DASKFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGA 223
+ + M+ A +FS + ++ + V + ++D F + DI
Sbjct: 678 IHVLCKNNDMDGAIRMFS-------------IMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 224 SRKLFNKMPQR----SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
S KLF +M ++ S+VS++++I G + G EA ++FH + P+ + ++
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAV 312
++G L ++ + +N ++ DD+L A+
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/446 (20%), Positives = 196/446 (43%), Gaps = 39/446 (8%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ ++N +I + +D + A +F +M +GL +P+ ++ ++L A + +
Sbjct: 365 PDTRTYNILISLHTKNNDIE-----RAGAYFKEMKDDGL-KPDPVSYRTLLYAFSIRHMV 418
Query: 139 QEGKEIHGFVVKLGLDN---DEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLV 195
+E + G + ++ DN DE+ S L RMY ++E ++ F + H N +
Sbjct: 419 EEAE---GLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRF--HVAGNMS--- 470
Query: 196 RNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLF---NKMPQRSVVSWNVMISGYAQNGFF 252
EG ++ ID + G + + ++F ++ +R+V+ +NVMI Y +
Sbjct: 471 -----SEG----YSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSC 521
Query: 253 KEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAV 312
++A ++F M V+P+ T +++ ++ G+ + D + AV
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 313 IDMYAKCGSVEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGV 369
I + K G + A +V++++ + + + + +I A G A+ Y M++AG+
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 370 TPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIE--PRVEHYGCMVDXXXXXXXXXX 427
V+Y L+ + G ++E +++ +++ P V CM++
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRK 701
Query: 428 XXXXVLNMPIR--PDDVIWKALLGACKMHGNVKMGERVARTL--MKLFPHDSGSYVALSN 483
+M R ++ + +L K +G + ++A+ + MK+ D SY ++
Sbjct: 702 AEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILT-DPLSYNSVLG 760
Query: 484 IFASRGNWVGVVEVRLKMKEMDVRKD 509
+FA G + VE +M ++ D
Sbjct: 761 LFALDGRFKEAVETFKEMVSSGIQPD 786
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/444 (19%), Positives = 165/444 (37%), Gaps = 80/444 (18%)
Query: 103 LEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDE----- 157
+ AL + G+M G+ +P+ T VL+ K Q+ +E F K D ++
Sbjct: 239 VHALCWLGKMSKIGM-QPDEVTTGIVLQMYKKAREFQKAEE---FFKKWSCDENKADSHV 294
Query: 158 ----FVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRM-QEGVV---VLWN 209
+ + ++ Y G +++A F KRM +EG+V V +N
Sbjct: 295 CLSSYTYNTMIDTYGKSGQIKEASETF-----------------KRMLEEGIVPTTVTFN 337
Query: 210 VMIDGFVRLGDIGASRKLFNKMPQR---SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGD 266
MI + G +G L M ++N++IS + +N + A F +M+
Sbjct: 338 TMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDG 397
Query: 267 VSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAI 326
+ P+ ++ ++L A S +E + + + + +EID+ SA+ MY + +EK+
Sbjct: 398 LKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSW 457
Query: 327 QVFEKIE------------------------------------NKKNAITWSAIIGGLAM 350
F++ NK+ I ++ +I +
Sbjct: 458 SWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGI 517
Query: 351 HGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVE 410
A + + M GVTP Y L+ + A + +GR M + + +
Sbjct: 518 SKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP 577
Query: 411 HYGCMVDXXXXXXXXXXXXXXV----LNMPIRPDDVIWKALLGACKMHGNVKMGERVART 466
+ C V V + I PD V++ L+ A GNV+
Sbjct: 578 Y--CAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 467 LMKL-FPHDSGSYVALSNIFASRG 489
+ + P +S Y +L ++ G
Sbjct: 636 MKEAGIPGNSVIYNSLIKLYTKVG 659
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/451 (17%), Positives = 188/451 (41%), Gaps = 88/451 (19%)
Query: 1 MNLICEPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSV 60
M L C P T T + L + I++ GL DP++ +L S+
Sbjct: 359 MKLHCAPDTRTY----NILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSI 414
Query: 61 SDRRDLKYARKFFTQMNNPNC----FSWNTIIRAFAETDD-DDYKNPLEALGFFGQMCSE 115
R ++ A +M++ N ++ + + R + E + + + + G M SE
Sbjct: 415 --RHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE 472
Query: 116 GLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASN-LVRMYAMCGVME 174
G + + + A + G + E + + F+ ++ + N +++ Y + E
Sbjct: 473 G--------YSANIDAYGERGYLSEAERV--FICCQEVNKRTVIEYNVMIKAYGISKSCE 522
Query: 175 DAYLLFSNYVSH-------FDNNSTKLVRNKRM------------QEGVV---VLWNVMI 212
A LF + +S+ N +++ + M + G V + + +I
Sbjct: 523 KACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVI 582
Query: 213 DGFVRLGDIGASRKLFNKMPQRS----VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
FV+LG + + +++ +M + + VV + V+I+ +A G ++AM M+ +
Sbjct: 583 SSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIP 642
Query: 269 PNYITLVSVLPAISRLGALELGKWVH-----------------------LYAEKNEI--- 302
N + S++ +++G L+ + ++ LY+E++ +
Sbjct: 643 GNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKA 702
Query: 303 -----------EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGL 348
E ++ + ++ MY K G E+A Q+ +++ K + +++++++G
Sbjct: 703 EAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLF 762
Query: 349 AMHGRANDALDYYRKMQQAGVTPTDVVYIGL 379
A+ GR +A++ +++M +G+ P D + L
Sbjct: 763 ALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/459 (19%), Positives = 192/459 (41%), Gaps = 44/459 (9%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ ++NT+I A++ + EA M +G P +T+ +V+ K G+
Sbjct: 268 PDIVTYNTLISAYSSKGLME-----EAFELMNAMPGKGF-SPGVYTYNTVINGLCKHGKY 321
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSH--------FDNN 190
+ KE+ +++ GL D +L+ G + + +FS+ S F +
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 191 STKLVRNKRMQEGVV--------------VLWNVMIDGFVRLGDIGASRKLFNKMPQRS- 235
+ R+ + + ++ V++ ++I G+ R G I + L N+M Q+
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 236 ---VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKW 292
VV++N ++ G + EA +F++M + P+ TL ++ +LG L+
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 293 VHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLA 349
+ ++ I +D V + ++D + K G ++ A +++ + +K+ I++S ++ L
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 350 MHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRV 409
G +A + +M + PT ++ ++ +G +G S M+ G P
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS-EGFVPDC 620
Query: 410 EHYGCMVDXXXXXXXXXXXXXXVLNMP-----IRPDDVIWKALL-GACKMHGNVKMGERV 463
Y ++ V M + PD + ++L G C+ +K E V
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR-QNQMKEAEVV 679
Query: 464 ARTLMKLFPH-DSGSYVALSNIFASRGNWVGVVEVRLKM 501
R +++ + D +Y + N F S+ N + +M
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/414 (17%), Positives = 176/414 (42%), Gaps = 63/414 (15%)
Query: 33 KQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNN----PNCFSWNTII 88
K++ A +++GL D +L + + D+ K F+ M + P+ +++++
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLL--MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 89 RAFAETDDDD----YKNPLEALGFFGQ----------MCSEGLVEP-------------- 120
F + + D Y N ++ G C +G++
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 121 -NRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL 179
+ T+ ++L K + E ++ + + L D + + L+ + G +++A L
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV--- 236
F ++ KR++ VV +N ++DGF ++GDI +++++ M + +
Sbjct: 503 FQK------------MKEKRIRLDVVT-YNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 237 -VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL 295
+S++++++ G EA V+ +M ++ P + S++ R G G+
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES--- 606
Query: 296 YAEK--NEIEIDDVLG-SAVIDMYAKCGSVEKAIQVFEKIENKKNAI-----TWSAIIGG 347
+ EK +E + D + + +I + + ++ KA + +K+E ++ + T+++I+ G
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 348 LAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
+ +A RKM + GV P Y +++ + E + + M++
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/371 (19%), Positives = 153/371 (41%), Gaps = 70/371 (18%)
Query: 105 ALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLV 164
A G + ++ G V N +T ++ A K G++++ V + G+ D + L+
Sbjct: 219 AWGVYQEISRSG-VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 165 RMYAMCGVMEDAYLL--------FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGF- 215
Y+ G+ME+A+ L FS V ++ L ++ + + V ++ G
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 216 -------------VRLGDIGASRKLFNKMPQRSVVS------------------------ 238
+ GD+ + K+F+ M R VV
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 239 ---------------WNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISR 283
+ ++I GY + G AM++ ++M + + +T ++L + +
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 284 LGALELGKWVHLYAEKNEIEI--DDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NA 338
LG+ L+ E E + D + +ID + K G+++ A+++F+K++ K+ +
Sbjct: 458 RKM--LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 339 ITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNH 398
+T++ ++ G G + A + + M + PT + Y L++A G + E +++
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 399 MVKVVGIEPRV 409
M+ I+P V
Sbjct: 576 MIS-KNIKPTV 585
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 148/335 (44%), Gaps = 14/335 (4%)
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV----SWNVMISGYAQNGFFKEAMDVF 259
V +N+MID + GD+ A+R LF +M R +V ++N MI G+ + G + + F
Sbjct: 129 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 188
Query: 260 HDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC 319
+M+ P+ IT +++ + G L +G + + N ++ + V S ++D + K
Sbjct: 189 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 248
Query: 320 GSVEKAIQVF---EKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
G +++AI+ + ++ N T++++I G +DA +M Q GV V Y
Sbjct: 249 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 308
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
L+ A ++E LF M G+ P + Y ++ + +
Sbjct: 309 TALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 367
Query: 437 ---IRPDDVIWKALL-GACKMHGNVKMGERVARTLMKL-FPHDSGSYVALSNIFASRGNW 491
I+PD +++ + G C + ++ + V + + +S Y L + + GN
Sbjct: 368 GRGIKPDLLLYGTFIWGLCSLE-KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 426
Query: 492 VGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLV 526
+ + +MKE+D+ + IDG+ LV
Sbjct: 427 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 461
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/417 (19%), Positives = 168/417 (40%), Gaps = 72/417 (17%)
Query: 72 FFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPS 127
FF +M + P+ ++N +I F + K P+ L F+ +M GL +PN ++ +
Sbjct: 187 FFEEMKDMCCEPDVITYNALINCFCKFG----KLPI-GLEFYREMKGNGL-KPNVVSYST 240
Query: 128 VLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHF 187
++ A K G +Q+ + + + ++GL +E+ ++L+ G + DA+ L
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL-------- 292
Query: 188 DNNSTKLVRNKRMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV----SWN 240
N+ +Q GV VV + +IDG + + +LF KM V+ S+N
Sbjct: 293 --------GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 344
Query: 241 VMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKN 300
+I G+ + A+++ ++++ + P+ + + + + L +E K V N
Sbjct: 345 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV-----MN 399
Query: 301 EIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDY 360
E++ +CG K N++ ++ ++ G + L
Sbjct: 400 EMK--------------ECGI-------------KANSLIYTTLMDAYFKSGNPTEGLHL 432
Query: 361 YRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXX 420
+M++ + T V + L+ L+ + FN + G++ + M+D
Sbjct: 433 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 492
Query: 421 XXXXXXXXXXXVLNM---PIRPDDVIWKALLGACKMHGNV----KMGERVARTLMKL 470
M + PD + +L+ GNV + +++A MKL
Sbjct: 493 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKL 549
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 154/364 (42%), Gaps = 33/364 (9%)
Query: 66 LKYARKFFTQMNN----PNCFSWNTIIRAFAET-DDDDYKNPLEALGFFGQMCSEGLVEP 120
L+ A + F++M P S N ++ FA+ DD K FF M G P
Sbjct: 76 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR------FFKDMIGAG-ARP 128
Query: 121 NRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF 180
FT+ ++ K G ++ + + + GL D ++++ + G ++D F
Sbjct: 129 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 188
Query: 181 SNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP----QRSV 236
E V+ +N +I+ F + G + + + +M + +V
Sbjct: 189 EEM-------------KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 235
Query: 237 VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLY 296
VS++ ++ + + G ++A+ + DM+ + PN T S++ A ++G L +
Sbjct: 236 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 295
Query: 297 AEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGR 353
+ +E + V +A+ID +++A ++F K++ N +++A+I G
Sbjct: 296 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 355
Query: 354 ANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYG 413
+ AL+ +++ G+ P ++Y + IE + + N M K GI+ Y
Sbjct: 356 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM-KECGIKANSLIYT 414
Query: 414 CMVD 417
++D
Sbjct: 415 TLMD 418
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 160/372 (43%), Gaps = 37/372 (9%)
Query: 66 LKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTF 125
L++ R+ PN S++T++ AF + +A+ F+ M GLV PN +T+
Sbjct: 220 LEFYREMKGNGLKPNVVSYSTLVDAFCKEG-----MMQQAIKFYVDMRRVGLV-PNEYTY 273
Query: 126 PSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY-- 183
S++ A K+G + + + ++++G++ + + L+ M++A LF
Sbjct: 274 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 333
Query: 184 ------VSHFDNNSTKLVRNKRMQEGV--------------VVLWNVMIDGFVRLGDIGA 223
++ ++ V+ K M + ++L+ I G L I A
Sbjct: 334 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 393
Query: 224 SRKLFNKMPQRSVVS----WNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
++ + N+M + + + + ++ Y ++G E + + +M+ D+ +T ++
Sbjct: 394 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 453
Query: 280 AISRLGALELG-KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK--- 335
+ + + + + + ++ + + +A+ID K VE A +FE++ K
Sbjct: 454 GLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 513
Query: 336 KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSL 395
+ +++++ G G +AL KM + G+ + Y L+ SH +++ RS
Sbjct: 514 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF 573
Query: 396 FNHMVKVVGIEP 407
M+ GI P
Sbjct: 574 LEEMIG-EGIHP 584
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 124/264 (46%), Gaps = 24/264 (9%)
Query: 176 AYLLFSNYVSHFDNNST--KLVRNKRMQEGVVVLW---NVMIDGF----------VRLGD 220
A++LF + ++D NS ++V +K + VLW NV + GF + LG
Sbjct: 17 AHILFCARM-YYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGM 75
Query: 221 IGASRKLFNKMPQRSVV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVS 276
+ + + F+KM + V S N ++ +A+ G + F DM P T
Sbjct: 76 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 135
Query: 277 VLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN-- 334
++ + + G +E + + + + D V +++ID + K G ++ + FE++++
Sbjct: 136 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 195
Query: 335 -KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGR 393
+ + IT++A+I G+ L++YR+M+ G+ P V Y L+ A G++++
Sbjct: 196 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 255
Query: 394 SLFNHMVKVVGIEPRVEHYGCMVD 417
+ M + VG+ P Y ++D
Sbjct: 256 KFYVDM-RRVGLVPNEYTYTSLID 278
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 144/347 (41%), Gaps = 53/347 (15%)
Query: 66 LKYARKFFTQMN----NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPN 121
++ ARK+F +M PN ++ +I A+ + Y N L F M SEG + PN
Sbjct: 493 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL-----FETMLSEGCL-PN 546
Query: 122 RFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVME--DAYLL 179
T+ +++ K G++++ +I MCG + D +
Sbjct: 547 IVTYSALIDGHCKAGQVEKACQI---------------------FERMCGSKDVPDVDMY 585
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV--- 236
F Y D+NS + VV + ++DGF + + +RKL + M
Sbjct: 586 FKQY----DDNS---------ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 632
Query: 237 -VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL 295
+ ++ +I G + G EA +V +M T S++ ++ +L V
Sbjct: 633 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 692
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHG 352
+N + V+ + +ID K G ++A ++ + +E K N +T++A+I G M G
Sbjct: 693 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 752
Query: 353 RANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
+ L+ +M GV P V Y L+ C G ++ +L M
Sbjct: 753 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 157/447 (35%), Gaps = 96/447 (21%)
Query: 5 CEPTTATRPTHPSSLF--PQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSD 62
C P T T Q+ RCK + + + + + + A
Sbjct: 292 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA--------YCT 343
Query: 63 RRDLKYARKFFTQM----NNPNCFSWNTIIRAFAETDDDDYKNPLE-ALGFFGQMCSEGL 117
D YA K +M + P +N +I + D + L+ A + +M + G+
Sbjct: 344 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 403
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
V N+ S + G+ ++ + ++ G D S ++ ME A+
Sbjct: 404 V-LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 462
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVV----LWNVMIDGFVRLGDIGASRKLFNKMPQ 233
LLF + M+ G +V + +M+D F + G I +RK FN+M +
Sbjct: 463 LLF-----------------EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 505
Query: 234 ----RSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALEL 289
+VV++ +I Y + A ++F M PN +T
Sbjct: 506 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY--------------- 550
Query: 290 GKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK------------- 336
SA+ID + K G VEKA Q+FE++ K
Sbjct: 551 --------------------SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 590
Query: 337 ------NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIE 390
N +T+ A++ G R +A M G P +VY L+ G ++
Sbjct: 591 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 650
Query: 391 EGRSLFNHMVKVVGIEPRVEHYGCMVD 417
E + + M + G + Y ++D
Sbjct: 651 EAQEVKTEMSE-HGFPATLYTYSSLID 676
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 158/349 (45%), Gaps = 40/349 (11%)
Query: 82 FSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEG 141
FS+ +I A+ + Y+ LE L +M +E + P+ T+ +V+ ACA+ G EG
Sbjct: 177 FSYTALINAYGR--NGRYETSLELLD---RMKNEK-ISPSILTYNTVINACARGGLDWEG 230
Query: 142 KEIHGFVVKL---GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
+ G ++ G+ D + L+ A+ G+ ++A ++F +
Sbjct: 231 --LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVF-----------------R 271
Query: 199 RMQEGVVV----LWNVMIDGFVRLGDIGASRKLFNKMPQRS----VVSWNVMISGYAQNG 250
M +G +V ++ +++ F +L + L +M + S+NV++ YA++G
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSG 331
Query: 251 FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGS 310
KEAM VFH MQ +PN T +L + G + + + L + + + D +
Sbjct: 332 SIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYN 391
Query: 311 AVIDMYAKCGSVEKAIQVFEKI--EN-KKNAITWSAIIGGLAMHGRANDALDYYRKMQQA 367
+I+++ + G ++ + +F + EN + + T+ II G DA + M
Sbjct: 392 ILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN 451
Query: 368 GVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
+ P+ Y G++ A A L EE FN M + VG P +E + ++
Sbjct: 452 DIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHE-VGSNPSIETFHSLL 499
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 207 LWNVMIDGFVRLGDIGASRKLFNKMPQ----RSVVSWNVMISGYAQNGFFKEAMDVFHDM 262
++ +MI R G + ++F++MP RSV S+ +I+ Y +NG ++ ++++ M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 263 QMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNE--IEIDDVLGSAVIDMYAKCG 320
+ +SP+ +T +V+ A +R G L+ + L+AE I+ D V + ++ A G
Sbjct: 203 KNEKISPSILTYNTVINACAR-GGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG 261
Query: 321 SVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYI 377
++A VF + + + T+S ++ R D +M G P Y
Sbjct: 262 LGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYN 321
Query: 378 GLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
LL A + +G I+E +F H ++ G P Y +++
Sbjct: 322 VLLEAYAKSGSIKEAMGVF-HQMQAAGCTPNANTYSVLLN 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 21/268 (7%)
Query: 19 LFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQM-- 76
L A+ SIK+ + G + + +L S R D R+ F +M
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD--DVRQLFLEMKS 380
Query: 77 --NNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAK 134
+P+ ++N +I F E +K E + F M E +EP+ T+ ++ AC K
Sbjct: 381 SNTDPDAATYNILIEVFGE--GGYFK---EVVTLFHDMVEEN-IEPDMETYEGIIFACGK 434
Query: 135 MGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKL 194
G ++ ++I ++ + + ++ + + E+A + F N ++
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAF--------NTMHEV 486
Query: 195 VRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMISGYAQNGFFKE 254
N ++ +L++ G V+ + SR + + +P R+ ++N I Y Q G F+E
Sbjct: 487 GSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP-RNRDTFNAQIEAYKQGGKFEE 545
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAIS 282
A+ + DM+ P+ TL +VL S
Sbjct: 546 AVKTYVDMEKSRCDPDERTLEAVLSVYS 573
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 51/318 (16%)
Query: 215 FVRLGDIGASRKLFNKMPQRSVVS------WNVMISGYAQNGFFKEAMDVFHDMQMGDVS 268
F GD S +LF M QR + + +MIS + G + ++VF +M VS
Sbjct: 115 FAGRGDWQRSLRLFKYM-QRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVS 173
Query: 269 PNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQV 328
+ + +A+I+ Y + G E ++++
Sbjct: 174 RSVFSY-----------------------------------TALINAYGRNGRYETSLEL 198
Query: 329 FEKIENKK---NAITWSAIIGGLAMHGRANDAL-DYYRKMQQAGVTPTDVVYIGLLSACS 384
++++N+K + +T++ +I A G + L + +M+ G+ P V Y LLSAC+
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 385 HAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIR---PDD 441
GL +E +F M GI P + Y +V+ + M PD
Sbjct: 259 IRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 442 VIWKALLGACKMHGNVKMGERVARTLMKL-FPHDSGSYVALSNIFASRGNWVGVVEVRLK 500
+ LL A G++K V + ++ +Y L N+F G + V ++ L+
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 501 MKEMDVRKDPGCSWIEID 518
MK + D I I+
Sbjct: 378 MKSSNTDPDAATYNILIE 395
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/536 (20%), Positives = 214/536 (39%), Gaps = 82/536 (15%)
Query: 5 CEPTTATRPTHPSSLFPQIARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDRR 64
C P T + +++ LK++ G+ D ++ LS + R
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ----GIAPDIFCYNSLIIGLSKAKRM 503
Query: 65 DLKYARKFFTQMN----NPNCFSWNTIIRAFAETDD----DDY----------KNPLEAL 106
D AR F +M PN F++ I + E + D Y N +
Sbjct: 504 D--EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 107 GFFGQMCSEG-LVEP--------------NRFTFPSVLKACAKMGRIQEGKEIHGFVVKL 151
G + C +G ++E + T+ ++ K ++ + +EI +
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 152 GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGV---VVLW 208
G+ D F L+ ++ G M+ A +F V +EG+ V+++
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV----------------EEGLTPNVIIY 665
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAMDVFHDMQM 264
N+++ GF R G+I +++L ++M + + V++ +I GY ++G EA +F +M++
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYA-EKNEIEIDDVLGSAVIDMYAKCGSVE 323
+ P+ +++ RL +E + + ++ K +A+I+ K G E
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVE--RAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 324 KAIQVFEKIEN-------KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
+V ++ + K N +T++ +I L G A + + +MQ A + PT + Y
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 377 IGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP 436
LL+ G E +F+ + GIEP Y +++ V M
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAI-AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 437 IRP--DD------VIWKALLGACKMHGNVKMGERVARTLMKL-FPHDSGSYVALSN 483
+ DD +ALL G +++ E+V +++L + DS + + L N
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 164/411 (39%), Gaps = 101/411 (24%)
Query: 105 ALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLG--LDNDEF---- 158
AL M +GLV P ++T+ ++ K+ R+++ K + + LG LDN +
Sbjct: 261 ALKLKESMICKGLV-PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319
Query: 159 ----------VASNLVR------------MYAMC-------GVMEDAYLLFSNYVSH--- 186
A LV MY C GVME A LF ++
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379
Query: 187 -----FDNNSTKLVRNKRMQEGVVVL--------------WNVMIDGFVRLGDIGASRKL 227
+ + R K +++G +L + ++ G GD+ + +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 228 FNKM----PQRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISR 283
+M + +VV + +I + QN F +AM V +M+ ++P+ S++ +S+
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 284 L--------------------GALELGKWVHLYAEKNEIEIDD---------------VL 308
A G ++ Y E +E D VL
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 309 GSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQ 365
+ +I+ Y K G V +A + + ++ +A T++ ++ GL + + +DA + +R+M+
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 366 QAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
G+ P Y L++ S G +++ S+F+ MV+ G+ P V Y ++
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EGLTPNVIIYNMLL 669
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 160/349 (45%), Gaps = 42/349 (12%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P S+NT++ AF E K ++ F + G V PN T+ ++K K
Sbjct: 112 PAIRSYNTLLNAFVEA-----KQWVKVESLFAYFETAG-VAPNLQTYNVLIKMSCKKKEF 165
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
++ + ++ K G D F S ++ A G ++DA LF ++
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF----------------DE 209
Query: 199 RMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV-----SWNVMISGYAQNG 250
+ GV V +N++IDGF++ D + +L++++ + S V + N+MISG ++ G
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Query: 251 FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGS 310
+ + ++ M+ + + T S++ + G ++ + V ++ + ID V +
Sbjct: 270 RVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329
Query: 311 AVIDMYAKCGSVEKAIQVFEKIENKK--NAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
++ + +CG ++++++++ +E+K N ++++ +I GL +G+ ++A +R M G
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 369 VTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
Y G+ G + ++ K +G+ VE G +D
Sbjct: 390 YAADKTTY----------GIFIHGLCVNGYVNKALGVMQEVESSGGHLD 428
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 170/386 (44%), Gaps = 31/386 (8%)
Query: 41 KTGLIGDPLAAAEILKFLSVSDRRDLKYARKFFTQMNN----PNCFSWNTIIRAFAETDD 96
K G D + + ++ L+ + + D A + F +M+ P+ +N +I F + +
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLD--DALELFDEMSERGVAPDVTCYNILIDGFLK--E 232
Query: 97 DDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDND 156
D+K +E + ++ + V PN T ++ +K GR+ + +I + + + D
Sbjct: 233 KDHKTAME---LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKD 289
Query: 157 EFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFV 216
+ S+L+ G ++ A +F+ ++R VV +N M+ GF
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNEL-------------DERKASIDVVTYNTMLGGFC 336
Query: 217 RLGDIGASRKLFNKMPQRS---VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYIT 273
R G I S +L+ M ++ +VS+N++I G +NG EA ++ M + + T
Sbjct: 337 RCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT 396
Query: 274 LVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE 333
+ + G + V E + +D +++ID K +E+A + +++
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456
Query: 334 N---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIE 390
+ N+ +A+IGGL R +A + R+M + G PT V Y L+ AG
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFG 516
Query: 391 EGRSLFNHMVKVVGIEPRVEHYGCMV 416
E + M++ G +P ++ Y ++
Sbjct: 517 EASAFVKEMLE-NGWKPDLKTYSILL 541
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Query: 209 NVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNGFFKEAMDVFHDMQM 264
N +I G +R +G + +M + +VVS+N++I G + G F EA +M
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 265 GDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEK 324
P+ T +L + R ++L + ++ +E D ++ + +I G ++
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 325 AIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
A+ V +E++ N +T++ ++ G G +N A + M + G+ P + Y
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISY 642
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 148/346 (42%), Gaps = 28/346 (8%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ ++ +I + + D AL +M +G +E + + +++ K +
Sbjct: 213 PDLVTYGAVINGLCKRGEPDL-----ALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
+ ++ + G+ D F + L+ G DA L S+ + N
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD------- 319
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR-----SVVSWNVMISGYAQNGFFK 253
+V +N +ID FV+ G + + KL+++M + VV++N +I G+ + +
Sbjct: 320 ------LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVI 313
E M+VF +M + N +T +++ + + + V + + D + + ++
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 314 DMYAKCGSVEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
D G+VE A+ VFE ++ K + +T++ +I L G+ D D + + GV
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
P V Y ++S GL EE +LF M K G P Y ++
Sbjct: 494 PNVVTYTTMMSGFCRKGLKEEADALFVEM-KEDGPLPNSGTYNTLI 538
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 145/350 (41%), Gaps = 40/350 (11%)
Query: 89 RAFAETDDDDYKNPL-----------EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
R+FA DD + L +A+G FG M P+ F +L A AKM +
Sbjct: 32 RSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNK 90
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKL-VR 196
V+ LG S+ + Y+ +F NY S L +
Sbjct: 91 FD-------LVISLGEQMQNLGISHNLYTYS----------IFINYFCRRSQLSLALAIL 133
Query: 197 NKRMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMP----QRSVVSWNVMISGYAQN 249
K M+ G +V N +++GF I + L ++M Q V++ ++ G Q+
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 250 GFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLG 309
EA+ + M + P+ +T +V+ + + G +L + EK +IE D V+
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 310 SAVIDMYAKCGSVEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQ 366
+ +ID K ++ A +F K+E K + T++ +I L +GR +DA M +
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 367 AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
+ P V + L+ A G + E L++ MVK P V Y ++
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 136/322 (42%), Gaps = 25/322 (7%)
Query: 105 ALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLV 164
AL G+M G P+ T S+L RI E + +V++G D + LV
Sbjct: 129 ALAILGKMMKLG-YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 165 RMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGAS 224
+A L V K Q +V + +I+G + G+ +
Sbjct: 188 HGLFQHNKASEAVALVERMVV------------KGCQPDLVT-YGAVINGLCKRGEPDLA 234
Query: 225 RKLFNKMP----QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPA 280
L NKM + VV +N +I G + +A D+F+ M+ + P+ T ++
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 281 ISRLGAL-ELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK--- 336
+ G + + + EKN I D V +A+ID + K G + +A ++++++ K
Sbjct: 295 LCNYGRWSDASRLLSDMLEKN-INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 337 -NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSL 395
+ + ++ +I G + R + ++ +R+M Q G+ V Y L+ A + + +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 396 FNHMVKVVGIEPRVEHYGCMVD 417
F MV G+ P + Y ++D
Sbjct: 414 FKQMVS-DGVHPDIMTYNILLD 434
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ ++NT+I+ F + YK E + F +M GLV N T+ ++
Sbjct: 354 PDVVAYNTLIKGFCK-----YKRVEEGMEVFREMSQRGLV-GNTVTYTTL---------- 397
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
IHGF DN + V +V +M Y + + + + N T LV +
Sbjct: 398 -----IHGFFQARDCDNAQMVFKQMVSDGVHPDIM--TYNILLDGLCNNGNVETALVVFE 450
Query: 199 RMQEGV----VVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISGYAQNG 250
MQ+ +V + MI+ + G + LF + + +VV++ M+SG+ + G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 251 FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLG 285
+EA +F +M+ PN T +++ A R G
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 174/435 (40%), Gaps = 71/435 (16%)
Query: 83 SWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGK 142
++ TI+ A++ T + +A+ F +M G P T+ +L KMGR +
Sbjct: 212 AYTTILHAYSRTGKYE-----KAIDLFERMKEMG-PSPTLVTYNVILDVFGKMGR--SWR 263
Query: 143 EIHGFVVKL---GLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKR 199
+I G + ++ GL DEF S ++ A G++ +A F+ +++
Sbjct: 264 KILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE------------LKSCG 311
Query: 200 MQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEA 255
+ G V +N ++ F + G + + +M + S V++N +++ Y + GF KEA
Sbjct: 312 YEPGTVT-YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 256 MDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDM 315
V M V PN IT +V ID
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTV-----------------------------------IDA 395
Query: 316 YAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPT 372
Y K G ++A+++F ++ N T++A++ L R+N+ + M+ G +P
Sbjct: 396 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 373 DVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXV 432
+ +L+ C + G+ + +F M K G EP + + ++
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREM-KSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514
Query: 433 LNMP---IRPDDVIWKALLGACKMHGNVKMGERVARTL-MKLFPHDSGSYVALSNIFASR 488
M + ALL A G+ + GE V + K F SY + +A
Sbjct: 515 GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKG 574
Query: 489 GNWVGVVEVRLKMKE 503
GN++G+ + ++KE
Sbjct: 575 GNYLGIERIENRIKE 589
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 130/341 (38%), Gaps = 52/341 (15%)
Query: 203 GVVVLWNVMIDGFVRL----GDIGASRKLFNKMPQRS----VVSWNVMISGYAQNGFFKE 254
G + L + +I+ FVR+ + KL +K+P + V ++ ++ Y++ G +++
Sbjct: 169 GALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEK 228
Query: 255 AMDVFHDMQMGDVSPNYITL------------------------------------VSVL 278
A+D+F M+ SP +T +VL
Sbjct: 229 AIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL 288
Query: 279 PAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK-- 336
A +R G L K + E V +A++ ++ K G +A+ V +++E
Sbjct: 289 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 337 -NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSL 395
+++T++ ++ G + +A M + GV P + Y ++ A AG +E L
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 396 FNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMP---IRPDDVIWKALLGACK 452
F M K G P Y ++ + +M P+ W +L C
Sbjct: 409 FYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCG 467
Query: 453 MHGNVKMGERVARTLMKL-FPHDSGSYVALSNIFASRGNWV 492
G K RV R + F D ++ L + + G+ V
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 138/351 (39%), Gaps = 66/351 (18%)
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
+PN +WNT++ D + N + F +M S G EP+R TF +++ A + G
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRV-----FREMKSCGF-EPDRDTFNTLISAYGRCGS 506
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCG------------------VMEDAY-L 178
+ +++G + + G + + L+ A G E +Y L
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 179 LFSNYVSHFDNNSTKLVRNKRMQEGVV-----VLWNVMIDGFVRLGDIGASR--KLFNKM 231
+ Y + + + N R++EG + +L +++ F G+ R LF K
Sbjct: 567 MLQCYAKGGNYLGIERIEN-RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Query: 232 PQR-SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELG 290
+ +V +N M+S + +N + +A + ++ +SP+ +T S++ R G
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG----- 680
Query: 291 KWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAM 350
+C E+ ++ EK + K + ++++ +I G
Sbjct: 681 ---------------------------ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 351 HGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
G +A+ +M + G+ P Y +S + G+ E + M K
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK 764
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 120/607 (19%), Positives = 233/607 (38%), Gaps = 148/607 (24%)
Query: 70 RKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVL 129
R+ + N + S++ +I ++ N EALG G+M EG VEPN T+ +++
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEG-----NVEEALGLLGKMIKEG-VEPNLITYTAII 319
Query: 130 KACAKMGRIQEGKEIHGFVVKLGLDNDEFV----------ASNLVRMYAMCGVMED---- 175
+ KMG+++E + ++ +G++ DEF+ NL R ++M G ME
Sbjct: 320 RGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Query: 176 ----AY------LLFSNYVSHFDNNSTKLVRN------------------------KRMQ 201
Y L + VS D S +V + +R
Sbjct: 380 PSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL 439
Query: 202 EGVV----VLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV----SWNVMISGYAQNGFFK 253
E + V+ N+++ F+ +G G + L+ MP+ + ++ MI GY + G +
Sbjct: 440 EAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIE 499
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGAL-----------ELGKWVHLYAEKN-- 300
EA+++F++++ VS + ++ A+ + G L E G ++ ++ +
Sbjct: 500 EALEMFNELRKSSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLL 558
Query: 301 --------------------EIEIDDVLG--SAVIDMYAKCGSVEKAIQVF--------- 329
++ D LG + I + K GS E AI+V+
Sbjct: 559 HSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT 618
Query: 330 ----------------------------EKIENKKNAITWSAIIGGLAMHGRANDALDYY 361
E + + I ++ II GL G AL+
Sbjct: 619 VTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLC 678
Query: 362 RKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXX 421
+ GVT + Y L++ G + E LF+ + + +G+ P YG ++D
Sbjct: 679 SFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL-ENIGLVPSEVTYGILIDNLCK 737
Query: 422 XXXXXXXXXXVLNM---PIRPDDVIWKALL-GACKMHGNVKMGERVARTLMKLFPHDSGS 477
+ +M + P+ +I+ +++ G CK+ V+R +M D+ +
Sbjct: 738 EGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFT 797
Query: 478 YVALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHEFLVEDESHPRAKEI 537
++ + +G+ + V + K+ ++ D I G + R +E
Sbjct: 798 VSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFC--------TKGRMEEA 849
Query: 538 RSMLEEI 544
R +L E+
Sbjct: 850 RGLLREM 856
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 62 DRRDLKYARKFFTQMNNPNC------FSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSE 115
++ ++ A + M N N F + +I F + P ALGFF
Sbjct: 146 EKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIG-----KPELALGFFESAVDS 200
Query: 116 GLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMED 175
G++ PN T+ +++ A ++G++ E +++ + G + D SN + Y G + D
Sbjct: 201 GVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVD 260
Query: 176 AYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS 235
A MQ+ R++ K R
Sbjct: 261 AL----------------------MQD----------------------REMVEKGMNRD 276
Query: 236 VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL 295
VVS++++I G ++ G +EA+ + M V PN IT +++ + ++G LE +
Sbjct: 277 VVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFN 336
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHG 352
IE+D+ L +ID + G++ +A + +E + + +T++ +I GL M G
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Query: 353 RANDA 357
R ++A
Sbjct: 397 RVSEA 401
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 140/318 (44%), Gaps = 30/318 (9%)
Query: 211 MIDGFVRLGDIGASRKLFNKMPQRSV------VSWNVMISGYAQNG-------FFKEAMD 257
+I FV G++ + ++ M ++V + +ISG+ + G FF+ A+D
Sbjct: 140 LIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVD 199
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYA 317
G + PN +T +++ A+ +LG ++ + + E E D V S I Y
Sbjct: 200 S------GVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYF 253
Query: 318 KCGS-VEKAIQVFEKIEN--KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
K G+ V+ +Q E +E ++ +++S +I GL+ G +AL KM + GV P +
Sbjct: 254 KGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLI 313
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLN 434
Y ++ G +EE LFN ++ VGIE Y ++D + +
Sbjct: 314 TYTAIIRGLCKMGKLEEAFVLFNRILS-VGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Query: 435 MP---IRPDDVIWKALLGACKMHGNVKMGERVARTLMKLFPHDSGSYVALSNIFASRGNW 491
M I+P + + ++ M G V + V++ ++ D +Y L + + N
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVV----GDVITYSTLLDSYIKVQNI 428
Query: 492 VGVVEVRLKMKEMDVRKD 509
V+E+R + E + D
Sbjct: 429 DAVLEIRRRFLEAKIPMD 446
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAMDVFH 260
V+ + ++I+G + G + + L + R V +++N +I+G Q G EA+ +F
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 261 DMQMGDVSPNYITLVSVLPAISRLGA-LELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC 319
++ + P+ +T ++ + + G L+ K + K + + ++ ++++D Y K
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP-NIIIYNSIVDGYCKL 773
Query: 320 GSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
G E A++V + + +A T S++I G G +AL + + + ++ +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 377 IGLLSACSHAGLIEEGRSLFNHMV---KVVGIEPRVE 410
+ L+ G +EE R L M+ VV + RV+
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVD 870
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 150/350 (42%), Gaps = 26/350 (7%)
Query: 248 QNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDV 307
+ G F+ A++V+ M+ ++ + + + + + L +L+ V E +D +
Sbjct: 598 KRGSFEAAIEVYMIMRRKGLTVTFPSTI-LKTLVDNLRSLDAYLLVVNAGETTLSSMDVI 656
Query: 308 LGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKM 364
+ +I+ K G + KA+ + +++ N IT++++I GL G +AL + +
Sbjct: 657 DYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL 716
Query: 365 QQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXX 424
+ G+ P++V Y L+ GL + L + MV G+ P + Y +VD
Sbjct: 717 ENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS-KGLVPNIIIYNSIVDGYCKLGQ 775
Query: 425 XXXXXXXV---LNMPIRPDDVIWKALL-GACKMHGNVKMGERVARTLM-KLFPHDSGSYV 479
V + + PD +++ G CK G+++ V K D ++
Sbjct: 776 TEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCK-KGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 480 ALSNIFASRGNWVGVVEVRLKMKEMDVRKDPGCSWIEIDGVIHE------FLVEDESHPR 533
L F ++G + E R ++EM V + +D + E FLVE R
Sbjct: 835 FLIKGFCTKGR---MEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGR 891
Query: 534 AKEIRSMLEEISNRIRSAGYRPNITQVL-----LNMDEEKKESALH-YHS 577
+ +L+EIS+ I +G Q L +N +E KK+ +H +HS
Sbjct: 892 VPQAIKILDEISSTIYPSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHS 941
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 145/328 (44%), Gaps = 30/328 (9%)
Query: 119 EPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYL 178
EP+ TF +++ GR+ E + +V++ D S L+ + G + +A +
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 179 LFSNYVSH------------------FDNNSTKLVRNKRMQE----GVVVLWNVMIDGFV 216
L V + N++ L ++M+E VV ++++ID
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 217 RLGDIGASRKLFNKMPQRS----VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
+ G + LFN+M + VV+++ +I G +G + + + +M ++ P+ +
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
T +++ + G L K ++ I D + +++ID + K + +A Q+F+ +
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 333 ENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLI 389
+K + +T+S +I R +D + +R++ G+ P + Y L+ +G +
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 390 EEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
+ LF MV G+ P V YG ++D
Sbjct: 437 NAAKELFQEMVS-RGVPPSVVTYGILLD 463
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 135/280 (48%), Gaps = 25/280 (8%)
Query: 120 PNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLL 179
P+ TF +++ K G++ E KE++ ++ G+ D ++L+ + + +A +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 180 FSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV-- 237
F VS + E +V ++++I+ + + + +LF ++ + ++
Sbjct: 373 FDLMVS-------------KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Query: 238 --SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHL 295
++N ++ G+ Q+G A ++F +M V P+ +T +L + G EL K + +
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG--ELNKALEI 477
Query: 296 YAEKNEIEIDDVLGSAVIDMYAKCGS--VEKAIQVFEKIENK---KNAITWSAIIGGLAM 350
+ + + + +G I ++ C + V+ A +F + +K + +T++ +IGGL
Sbjct: 478 FEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Query: 351 HGRANDALDYYRKMQQAGVTPTDVVYIGLLSA-CSHAGLI 389
G ++A +RKM++ G TP D Y L+ A +GLI
Sbjct: 538 KGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 120/275 (43%), Gaps = 31/275 (11%)
Query: 69 ARKFFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPL-EALGFFGQMCSEGLVEPNRF 123
A++ + +M P+ ++N++I F + +N L EA F M S+G EP+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCK------ENCLHEANQMFDLMVSKG-CEPDIV 386
Query: 124 TFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNY 183
T+ ++ + K R+ +G + + GL + + LV + G + A LF
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 184 VSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVS----- 238
VS R VV + +++DG G++ + ++F KM Q+S ++
Sbjct: 447 VS-------------RGVPPSVVTYGILLDGLCDNGELNKALEIFEKM-QKSRMTLGIGI 492
Query: 239 WNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAE 298
+N++I G +A +F + V P+ +T ++ + + G+L + +
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 299 KNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE 333
++ DD + +I + + ++++ E+++
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 134/303 (44%), Gaps = 55/303 (18%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
E + +F Q + + ++F ++ + R+ + G ++KLG + +L
Sbjct: 88 ETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSL 147
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGA 223
+ + + + DA+ S ++ K E VV++N +IDG + G++
Sbjct: 148 LHGFCLVNRIGDAF-------------SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNI 194
Query: 224 SRKLFNKMPQRS----VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
+ +L N+M ++ VV++N +++G +G + +A + DM ++P+ +T
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF----- 249
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK--- 336
+A+ID++ K G++++A ++++++
Sbjct: 250 ------------------------------TALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 337 NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLF 396
N +T+++II GL MHGR DA + M G P V Y L+S +++EG LF
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 397 NHM 399
M
Sbjct: 340 QRM 342
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 145/328 (44%), Gaps = 26/328 (7%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
PN +NT+I + + D N LE F M +G + + T+ +++ + GR
Sbjct: 711 PNVVIYNTVINGLCK--NRDLNNALEV---FYCMEKKG-IRADAVTYNTLISGLSNSGRW 764
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
+ + +VK +D + + L+ + G + +A L+ + +
Sbjct: 765 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI-------------R 811
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS----VVSWNVMISGYAQNGFFKE 254
R V +N +I+GF G +G ++ +F+ M + VV++N +I+G+ ++ ++
Sbjct: 812 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 871
Query: 255 AMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVID 314
M +F +M + + T +++ + G L + + V + D V + ++D
Sbjct: 872 GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 931
Query: 315 MYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
G +EKA+ + E ++ + + IT++ II GL + +A +R + + GV P
Sbjct: 932 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 991
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHM 399
+ YI ++S GL E L M
Sbjct: 992 DAIAYITMISGLCRKGLQREADKLCRRM 1019
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 24/261 (9%)
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
+ P+ TF +++ K G + E +E++ +++ +D + ++++ M G + DA
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 178 LLFSNYVSH--FDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP--- 232
F S F N VV +N +I GF + + KLF +M
Sbjct: 302 KTFDLMASKGCFPN---------------VVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 233 -QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGK 291
+ ++N +I GY Q G + A+D+F M V+P+ IT +L + G +E
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 292 WVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE---NKKNAITWSAIIGGL 348
++E I V + +I K VEKA ++F ++ K +A T++ +I GL
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 349 AMHGRANDALDYYRKMQQAGV 369
+G +A + R+M++ G+
Sbjct: 467 CKNGPRREADELIRRMKEEGI 487
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 144/343 (41%), Gaps = 31/343 (9%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
+A F +M + P+ F VL AKM + ++ + LG+ +D + + L
Sbjct: 591 DAFSLFCEMLQSRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 649
Query: 164 VRMYAMCGVMEDAY--------LLFSNYVSHFDNNSTKLVRNKRMQEGV----------- 204
+ + C + A L F + + + R QE V
Sbjct: 650 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 709
Query: 205 ---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAMD 257
VV++N +I+G + D+ + ++F M ++ + V++N +ISG + +G + +A
Sbjct: 710 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 769
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYA 317
+ DM + PN I +++ + G L + ++ + + + +++I+ +
Sbjct: 770 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 829
Query: 318 KCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
G + A +F+ + +K + +T++ +I G R D + + +M G+
Sbjct: 830 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 889
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
Y L+ AG + + +FN MV G+ P + Y ++D
Sbjct: 890 TYNTLIHGYCQAGKLNVAQKVFNRMVD-CGVSPDIVTYNILLD 931
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 135/326 (41%), Gaps = 28/326 (8%)
Query: 82 FSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEG 141
+S+ +I F + AL G+M G EP+ TF S+L + RI +
Sbjct: 107 YSFTILIHCFCRCSRLSF-----ALSVLGKMMKLG-YEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 142 KEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQ 201
+ +VK G + + V + L+ G + A L + K+
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM-------------EKKGL 207
Query: 202 EGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS----VVSWNVMISGYAQNGFFKEAMD 257
VV +N ++ G G + ++ M +RS VV++ +I + + G EA +
Sbjct: 208 GADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQE 267
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGAL-ELGKWVHLYAEKNEIEIDDVLGSAVIDMY 316
++ +M V PN +T S++ + G L + K L A K + V + +I +
Sbjct: 268 LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP-NVVTYNTLISGF 326
Query: 317 AKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTD 373
K V++ +++F+++ + + T++ +I G G+ ALD + M VTP
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386
Query: 374 VVYIGLLSACSHAGLIEEGRSLFNHM 399
+ + LL G IE F+ M
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDM 412
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 118/296 (39%), Gaps = 56/296 (18%)
Query: 104 EALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNL 163
EA+ M G V PN + +V+ K + E+ + K G+ D + L
Sbjct: 696 EAVSLVDSMDGFGFV-PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 754
Query: 164 VRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGA 223
+ + G DA L + V KR + V+ + +ID FV+ G++
Sbjct: 755 ISGLSNSGRWTDAARLLRDMV-------------KRKIDPNVIFFTALIDTFVKEGNLLE 801
Query: 224 SRKLFNKMPQRSVV----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLP 279
+R L+ +M +RSVV ++N +I+G+ +G +A +F M P+ +T
Sbjct: 802 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY----- 856
Query: 280 AISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK--- 336
+ +I + K VE +++F ++ +
Sbjct: 857 ------------------------------NTLITGFCKSKRVEDGMKLFCEMTYQGLVG 886
Query: 337 NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEG 392
+A T++ +I G G+ N A + +M GV+P V Y LL + G IE+
Sbjct: 887 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 942
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/472 (19%), Positives = 212/472 (44%), Gaps = 43/472 (9%)
Query: 63 RRDLKYARKFFTQMNNPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNR 122
R L++ + N P+ F+ N I ++ + +L F + S G P+R
Sbjct: 3 REALQFLSRLRKSSNLPDPFTCNKHIHQLINSN-----CGILSLKFLAYLVSRGYT-PHR 56
Query: 123 FTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSN 182
+F SV+ K+G+++ ++I + + G + D ++L+ + G + A L+ +
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 183 Y-VSH----------FDNNSTKLVRNKRMQE-----GV--------VVLWNVMIDGFVRL 218
SH F++ + K + E GV VV ++ ID F +
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 219 GDIGASRKLFNKMPQRS----VVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITL 274
G++ + K F+ M + + VV++ +I GY + G + A+ ++ +M+ +S N +T
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 275 VSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIEN 334
+++ + G ++ + ++ ++ +E + ++ + +ID + + G + A++ K+ N
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 335 KK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEE 391
+ + + II GL +G+ +A + M+++ + P V++ +++A +G ++
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 392 GRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXXVLNMPIRPDDVIWKALLGAC 451
++++ +++ G EP V M+D V + +DV++ L+ A
Sbjct: 357 AVNMYHKLIE-RGFEPDVVALSTMID--GIAKNGQLHEAIVYFCIEKANDVMYTVLIDAL 413
Query: 452 KMHGNVKMGERVARTLMK--LFPHDSGSYVALSNIFASRGNWVGVVEVRLKM 501
G+ ER+ + + L P D Y + +GN V +++ +M
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVP-DKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 174/398 (43%), Gaps = 51/398 (12%)
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
+PN +++T I F ++ + AL F M + L PN TF ++ K G
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQL-----ALKSFHSMKRDAL-SPNVVTFTCLIDGYCKAGD 213
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
++ ++ + ++ + + + L+ + G M+ A ++S V
Sbjct: 214 LEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV------------E 261
Query: 198 KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS----VVSWNVMISGYAQNGFFK 253
R++ +V + +IDGF + GD + K KM + + ++ V+ISG NG K
Sbjct: 262 DRVEPNSLV-YTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK 320
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNE--IEIDDVLGSA 311
EA ++ DM+ D+ P+ + +++ A + G ++ V++Y + E E D V S
Sbjct: 321 EATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA--VNMYHKLIERGFEPDVVALST 378
Query: 312 VIDMYAKCGSVEKAIQVFEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTP 371
+ID AK G + +AI V+ IE K N + ++ +I L G + + K+ +AG+ P
Sbjct: 379 MIDGIAKNGQLHEAI-VYFCIE-KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Query: 372 TDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXXXXXXX 431
+Y + AGL ++G ++V ++ R+ G ++D
Sbjct: 437 DKFMYTSWI-----AGLCKQG-----NLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASK 486
Query: 432 ------------VLNMPIRPDDVIWKALLGACKMHGNV 457
+LN I PD ++ L+ A + GN+
Sbjct: 487 GLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNM 524
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 152/345 (44%), Gaps = 29/345 (8%)
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
+PNC S+NT+I+ ++ D +AL F M G + PNR T ++ A + G
Sbjct: 188 SPNCVSYNTLIKGLCSVNNVD-----KALYLFNTMNKYG-IRPNRVTCNIIVHALCQKGV 241
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRN 197
I + +++ LD+ + +N +C ++ D+ N V + V
Sbjct: 242 IGNNNK---KLLEEILDSSQ---ANAPLDIVICTILMDSCFKNGNVVQALE------VWK 289
Query: 198 KRMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQRS----VVSWNVMISGYAQNG 250
+ Q+ V V++NV+I G G++ A+ M +R V ++N +IS + G
Sbjct: 290 EMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEG 349
Query: 251 FFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGS 310
F EA D+ MQ G V+P+ I+ ++ + G + L K+ + + +L +
Sbjct: 350 KFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWN 409
Query: 311 AVIDMYAKCGSVEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQA 367
VID Y + G A+ V + + K N T +A+I G GR DA +M+
Sbjct: 410 VVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRST 469
Query: 368 GVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHY 412
+ P Y LL A G + L++ M++ G +P + Y
Sbjct: 470 KIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLR-RGCQPDIITY 513
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 121/317 (38%), Gaps = 62/317 (19%)
Query: 71 KFFTQMNNP-NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVL 129
K +Q N P + +N IIR + N + A GF M G V P+ FT+ +++
Sbjct: 289 KEMSQKNVPADSVVYNVIIRGLCSSG-----NMVAAYGFMCDMVKRG-VNPDVFTYNTLI 342
Query: 130 KACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDN 189
A K G+ E ++HG + G+ D+
Sbjct: 343 SALCKEGKFDEACDLHGTMQNGGVAPDQ-------------------------------- 370
Query: 190 NSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQR----SVVSWNVMISG 245
+ + V+I G GD+ + + M + V+ WNV+I G
Sbjct: 371 ----------------ISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Query: 246 YAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEID 305
Y + G A+ V + M V PN T +++ + G L WV +I D
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 474
Query: 306 DVLGSAVIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYR 362
+ ++ G + A Q+++++ + + IT++ ++ GL GR A
Sbjct: 475 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS 534
Query: 363 KMQQAGVTPTDVVYIGL 379
++Q G+T V ++ L
Sbjct: 535 RIQATGITIDHVPFLIL 551
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 195 VRNKRMQEGVV---VLWNVMIDGFVRLGDIGASRKLFNKM----PQRSVVSWNVMISGYA 247
+R K + GV+ + N +++G + G I + L +M P + VS+N +I G
Sbjct: 143 LRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLC 202
Query: 248 QNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGAL-----ELGKWVHLYAEKNEI 302
+A+ +F+ M + PN +T ++ A+ + G + +L + + L + +
Sbjct: 203 SVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEI-LDSSQANA 261
Query: 303 EIDDVLGSAVIDMYAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALD 359
+D V+ + ++D K G+V +A++V++++ K +++ ++ II GL G A
Sbjct: 262 PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYG 321
Query: 360 YYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
+ M + GV P Y L+SA G +E L M
Sbjct: 322 FMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 142/328 (43%), Gaps = 30/328 (9%)
Query: 119 EPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYL 178
EP+ TF +++ GR+ E E+ +V++G + LV + G + DA L
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 179 LFSNYV-SHFDNN---------------STKLVRN--KRMQEGVVVL----WNVMIDGFV 216
L V + F N T L ++M+E + L ++++IDG
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 217 RLGDIGASRKLFNKMP----QRSVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYI 272
+ G + + LFN+M + ++ + +I G+ G + + + DM ++P+ +
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 273 TLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKI 332
+++ + G L + +H + I D V +++ID + K ++KA + + +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 333 ENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLI 389
+K N T++ +I G +D L+ +RKM GV V Y L+ G +
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 390 EEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
E + LF MV + P + Y ++D
Sbjct: 439 EVAKELFQEMVS-RRVRPDIVSYKILLD 465
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 131/288 (45%), Gaps = 27/288 (9%)
Query: 118 VEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAY 177
+ P+ F +++ K G+++E +E+H +++ G+ D ++L+ + ++ A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 178 LLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV 237
+ VS + + +N++I+G+ + I +LF KM R VV
Sbjct: 373 HMLDLMVSKGCGPNIRT-------------FNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 238 ----SWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWV 293
++N +I G+ + G + A ++F +M V P+ ++ +L + G E +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 294 HLYAEKNEIEIDDVLGSAVIDMYAKCGSVEKAIQVFEKIE---NKKNAITWSAIIGGLAM 350
EK+++E+D + + +I V+ A +F + K + T++ +IGGL
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 351 HGRANDALDYYRKMQQAGVTPTDVVY-------IGLLSACSHAGLIEE 391
G ++A +RKM++ G +P Y +G A A LIEE
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 167/443 (37%), Gaps = 74/443 (16%)
Query: 24 ARCKSIKQLKQIHAHFIKTGLIGDPLAAAEILKFLSVSDR--RDLKYARKFFTQMNNPNC 81
RC+ + IK G D + + ++ L + R L+ + + P
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 82 FSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEG 141
+ N ++ +A+ +M G +PN T+ VLK K G+
Sbjct: 178 ITLNALVNGLCLNG-----KVSDAVLLIDRMVETGF-QPNEVTYGPVLKVMCKSGQTALA 231
Query: 142 KEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSN------------------- 182
E+ + + + D S ++ G +++A+ LF+
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 183 --YVSHFDNNSTKLVRN--KRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV- 237
Y +D+ + KL+R+ KR VV ++ +ID FV+ G + + +L +M QR +
Sbjct: 292 FCYAGRWDDGA-KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 238 --------------------------------------SWNVMISGYAQNGFFKEAMDVF 259
++N++I+GY + + +++F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 260 HDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC 319
M + V + +T +++ LG LE+ K + + D V ++D
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 320 GSVEKAIQVFEKIENKKNAI---TWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
G EKA+++FEKIE K + ++ II G+ + +DA D + + GV P Y
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 377 IGLLSACSHAGLIEEGRSLFNHM 399
++ G + E LF M
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKM 553
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 135/356 (37%), Gaps = 58/356 (16%)
Query: 69 ARKFFTQMNN----PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
A F +M P ++ + A T D L QM +G+ N +T
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDL-----VLDLCKQMELKGIAH-NLYT 109
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
++ C + ++ G ++KLG + D S L+ + G + +A L
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALEL----- 164
Query: 185 SHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVVSWNVMIS 244
+D V +G + ++++ N +++
Sbjct: 165 ---------------------------VDRMVEMGH------------KPTLITLNALVN 185
Query: 245 GYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEI 304
G NG +A+ + M PN +T VL + + G L + E+ +I++
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 305 DDVLGSAVIDMYAKCGSVEKAIQVFEKIE---NKKNAITWSAIIGGLAMHGRANDALDYY 361
D V S +ID K GS++ A +F ++E K + I ++ +I G GR +D
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 362 RKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
R M + +TP V + L+ G + E L M++ GI P Y ++D
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLID 360
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Query: 254 EAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVI 313
+A+D+F +M P I + ++R +L + E I + S +I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 314 DMYAKCGSVEKAIQVFEKIEN---KKNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVT 370
+ +C + A KI + + +T+S +I GL + GR ++AL+ +M + G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 371 PTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYG 413
PT + L++ G + + L + MV+ G +P YG
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVE-TGFQPNEVTYG 216
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 150/323 (46%), Gaps = 26/323 (8%)
Query: 84 WNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEGKE 143
++T+I + + Y++ +AL F +M ++G + P+ FT+ S++ GR +
Sbjct: 243 YSTVIDSLCK-----YRHVDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 144 IHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQEG 203
+ +++ ++ + ++L+ +A G + +A LF + +R +
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI-------------QRSIDP 343
Query: 204 VVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS----VVSWNVMISGYAQNGFFKEAMDVF 259
+V +N +I+GF + ++++F M + VV++N +I+G+ + + M++F
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 260 HDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKC 319
DM + N +T +++ + + + V + + + + + ++D K
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 320 GSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVY 376
G +EKA+ VFE ++ K + T++ + G+ G+ D D + + GV P + Y
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 377 IGLLSACSHAGLIEEGRSLFNHM 399
++S GL EE +LF M
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKM 546
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 205 VVLWNVMIDGFVRLGDIGASRKLFNKMP----QRSVVSWNVMISGYAQNGFFKEAMDVFH 260
+V N +++GF I + L ++M Q V++ ++ G Q+ EA+ +
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Query: 261 DMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYAKCG 320
M + P+ +T +V+ + + G +L + EK +IE D V+ S VID K
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254
Query: 321 SVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYI 377
V+ A+ +F +++NK + T+S++I L +GR +DA M + + P V +
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 378 GLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVD 417
L+ A + G + E LF+ M++ I+P + Y +++
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPNIVTYNSLIN 353
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 135/329 (41%), Gaps = 26/329 (7%)
Query: 80 NCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQ 139
N +++N +I + AL G+M G P+ T S+L RI
Sbjct: 99 NLYTYNIMINCLCRRSQLSF-----ALAILGKMMKLG-YGPSIVTLNSLLNGFCHGNRIS 152
Query: 140 EGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKR 199
E + +V++G D + LV +A L V K
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV------------KG 200
Query: 200 MQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMP----QRSVVSWNVMISGYAQNGFFKEA 255
Q +V + +I+G + G+ + L NKM + VV ++ +I + +A
Sbjct: 201 CQPDLVT-YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 256 MDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDM 315
+++F +M + P+ T S++ + G + + +I + V +++ID
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 316 YAKCGSVEKAIQVFEKIENKK---NAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPT 372
+AK G + +A ++F+++ + N +T++++I G MH R ++A + M P
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 373 DVVYIGLLSACSHAGLIEEGRSLFNHMVK 401
V Y L++ A + +G LF M +
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 69 ARKFFTQMN----NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFT 124
A K F +M +PN ++N++I F D D EA F M S+ + P+ T
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD-----EAQQIFTLMVSKDCL-PDVVT 382
Query: 125 FPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYV 184
+ +++ K ++ +G E+ + + GL + + L+ + ++A ++F V
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 185 SH--------FDNNSTKLVRNKRMQEGVVVL--------------WNVMIDGFVRLGDIG 222
S ++ L +N ++++ +VV +N+M +G + G +
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 223 ASRKLFNKMPQRSV----VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVL 278
LF + + V +++N MISG+ + G +EA +F M+ P+ T +++
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 279 PAISRLG 285
A R G
Sbjct: 563 RAHLRDG 569
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 102/237 (43%), Gaps = 32/237 (13%)
Query: 78 NPNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGR 137
NPN ++N++I AFA+ +EA F +M ++PN T+ S++ R
Sbjct: 307 NPNVVTFNSLIDAFAKEG-----KLIEAEKLFDEMIQRS-IDPNIVTYNSLINGFCMHDR 360
Query: 138 IQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLF---------SNYVSHF- 187
+ E ++I +V D + L+ + + D LF N V++
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 188 ---------DNNSTKLVRNKRMQEGV---VVLWNVMIDGFVRLGDIGASRKLFNKMPQR- 234
D ++ ++V + + +GV ++ +N ++DG + G + + +F + +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 235 ---SVVSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALE 288
+ ++N+M G + G ++ D+F + + V P+ I +++ + G E
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 140/302 (46%), Gaps = 29/302 (9%)
Query: 79 PNCFSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRI 138
P+ ++N +I AF + L+A + +M + PN FT+ S++ G +
Sbjct: 245 PDVITFNALIDAFVKEG-----KFLDAEELYNEMIRMS-IAPNIFTYTSLINGFCMEGCV 298
Query: 139 QEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNK 198
E +++ + G D ++L+ + C ++DA +F ++
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM-------------SQ 345
Query: 199 RMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRSVV----SWNVMISGYAQNGFFKE 254
+ G + + +I GF ++G ++++F+ M R V ++NV++ NG K+
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 255 AMDVFHDMQ---MGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
A+ +F DMQ M V+PN T +L + G LE V K E++I + +
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTI 465
Query: 312 VIDMYAKCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAG 368
+I K G V+ A+ +F + +K N +T++ +I GL G ++A +RKM++ G
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Query: 369 VT 370
V+
Sbjct: 526 VS 527
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 163/358 (45%), Gaps = 39/358 (10%)
Query: 59 SVSDRRDLKYARKFFTQMNN----PNCFSWNTIIRAFAETDD-DDYKNPLEALGFFGQMC 113
S+ + YA F QM N P+ + +++ + D + L +
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM------- 238
Query: 114 SEGLVEPNRFTFPSVLKACAKMGRIQEGKEIHGFVVKLGLDNDEFVASNLVRMYAMCGVM 173
++ ++P+ TF +++ A K G+ + +E++ ++++ + + F ++L+ + M G +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 174 EDAYLLFSNYVSHFDNNSTKLVRNKRMQEGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQ 233
++A +F L+ K VV + +I+GF + + + K+F +M Q
Sbjct: 299 DEARQMFY------------LMETKGCFPDVVA-YTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 234 RSV----VSWNVMISGYAQNGFFKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALEL 289
+ + +++ +I G+ Q G A +VF M V PN T +L + G ++
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK- 404
Query: 290 GKWVHLYAEKNEIEIDDV---LGSAVIDMYAKC--GSVEKAIQVFE---KIENKKNAITW 341
K + ++ + + E+D V + + + ++ C G +EKA+ VFE K E IT+
Sbjct: 405 -KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 342 SAIIGGLAMHGRANDALDYYRKMQQAGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHM 399
+ II G+ G+ +A++ + + GV P V Y ++S GL E LF M
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 142/342 (41%), Gaps = 62/342 (18%)
Query: 82 FSWNTIIRAFAETDDDDYKNPLEALGFFGQMCSEGLVEPNRFTFPSVLKACAKMGRIQEG 141
++ N ++ F ++ P A F G+M G EP+ TF S++ R++E
Sbjct: 108 YTCNLLMNCFCQSSQ-----PYLASSFLGKMMKLGF-EPDIVTFTSLINGFCLGNRMEEA 161
Query: 142 KEIHGFVVKLGLDNDEFVASNLVRMYAMCGVMEDAYLLFSNYVSHFDNNSTKLVRNKRMQ 201
+ +V++G+ D + + ++ ++C Y L S FD +R
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIID--SLCKNGHVNYAL-----SLFDQMENYGIRPD--- 211
Query: 202 EGVVVLWNVMIDGFVRLGDIGASRKLFNKMPQRS----VVSWNVMISGYAQNGFFKEAMD 257
VV++ +++G G + L M +R V+++N +I + + G F +A +
Sbjct: 212 ---VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEE 268
Query: 258 VFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSAVIDMYA 317
++++M ++PN T S+ I+ +
Sbjct: 269 LYNEMIRMSIAPNIFTYTSL-----------------------------------INGFC 293
Query: 318 KCGSVEKAIQVFEKIENK---KNAITWSAIIGGLAMHGRANDALDYYRKMQQAGVTPTDV 374
G V++A Q+F +E K + + ++++I G + +DA+ + +M Q G+T +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 375 VYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMV 416
Y L+ G + +F+HMV G+ P + Y ++
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVS-RGVPPNIRTYNVLL 394
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 104/247 (42%), Gaps = 12/247 (4%)
Query: 252 FKEAMDVFHDMQMGDVSPNYITLVSVLPAISRLGALELGKWVHLYAEKNEIEIDDVLGSA 311
F EA+D+F M P+ I +L I+++ ++ ++L + + L +
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDV--VINLCDHLQIMGVSHDLYTC 110
Query: 312 VIDMYAKCGSVEKAIQV-----FEKIENKKNAITWSAIIGGLAMHGRANDALDYYRKMQQ 366
+ M C S + + K+ + + +T++++I G + R +A+ +M +
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 367 AGVTPTDVVYIGLLSACSHAGLIEEGRSLFNHMVKVVGIEPRVEHYGCMVDXXXXXXXXX 426
G+ P V+Y ++ + G + SLF+ M + GI P V Y +V+
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 427 XXXXXVLNMP---IRPDDVIWKALLGACKMHGNVKMGERVARTLMKL-FPHDSGSYVALS 482
+ M I+PD + + AL+ A G E + ++++ + +Y +L
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 483 NIFASRG 489
N F G
Sbjct: 290 NGFCMEG 296