Jatropha Genome Database

JcCA0045831.40

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0045831.40 - phase: 0 
         (92 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G74500.1 | Symbols:  | bHLH family protein | chr1:27998298-27...   119   3e-28
AT1G26945.1 | Symbols: KDR | KDR (KIDARI); transcription regulat...   116   4e-27
AT3G47710.1 | Symbols:  | bHLH family protein | chr3:17590729-17...   110   1e-25
AT5G39860.1 | Symbols: PRE1 | PRE1 (PACLOBUTRAZOL RESISTANCE1); ...   107   1e-24
AT3G28857.1 | Symbols:  | transcription regulator | chr3:1085578...   106   3e-24
AT5G15160.1 | Symbols:  | bHLH family protein | chr5:4921487-492...    94   2e-20

>AT1G74500.1 | Symbols:  | bHLH family protein |
          chr1:27998298-27998668 REVERSE
          Length = 93

 Score =  119 bits (298), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/77 (79%), Positives = 71/77 (92%), Gaps = 1/77 (1%)

Query: 17 ITDDQILDLVTKLQQLLPEI-GNRRSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELL 75
          I++DQI DL+ KLQQLLPE+  +RRSDKVSAA+VLQ+TCNYIRNLHREVDDLSERLSELL
Sbjct: 17 ISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERLSELL 76

Query: 76 ATTDTAQAAIIRNLLMQ 92
          A +DTAQAA+IR+LL Q
Sbjct: 77 ANSDTAQAALIRSLLTQ 93


>AT1G26945.1 | Symbols: KDR | KDR (KIDARI); transcription
          regulator | chr1:9351571-9352474 FORWARD
          Length = 94

 Score =  116 bits (290), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 59/74 (79%), Positives = 68/74 (91%), Gaps = 2/74 (2%)

Query: 19 DDQILDLVTKLQQLLPEIGNRRSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATT 78
          DDQI DLV+KLQ L+PE+  RRSDKVSA+KVLQETCNYIRNLHREVDDLS+RLSELLA+T
Sbjct: 19 DDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNLHREVDDLSDRLSELLAST 78

Query: 79 D--TAQAAIIRNLL 90
          D  +A+AAIIR+LL
Sbjct: 79 DDNSAEAAIIRSLL 92


>AT3G47710.1 | Symbols:  | bHLH family protein |
          chr3:17590729-17591455 FORWARD
          Length = 92

 Score =  110 bits (276), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 69/77 (89%), Gaps = 1/77 (1%)

Query: 17 ITDDQILDLVTKLQQLLPEIGN-RRSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELL 75
          ITD+QI DLV +L +LLPE+ N RRS KVSA++VLQETC+YIRNL +EVDDLSERLS+LL
Sbjct: 16 ITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLSQLL 75

Query: 76 ATTDTAQAAIIRNLLMQ 92
           +TD+AQAA+IR+LLMQ
Sbjct: 76 ESTDSAQAALIRSLLMQ 92


>AT5G39860.1 | Symbols: PRE1 | PRE1 (PACLOBUTRAZOL RESISTANCE1);
          DNA binding / transcription factor |
          chr5:15957689-15958303 FORWARD
          Length = 92

 Score =  107 bits (268), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/78 (69%), Positives = 70/78 (89%), Gaps = 3/78 (3%)

Query: 17 ITDDQILDLVTKLQQLLPEIGNRR-SDKVSAAKVLQETCNYIRNLHREVDDLSERLSELL 75
          I+D+Q++DLV+KL+Q+LPEIG RR SDK SA+KVLQETCNYIRNL+REVD+LSERLS+LL
Sbjct: 15 ISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNLNREVDNLSERLSQLL 74

Query: 76 ATT--DTAQAAIIRNLLM 91
           +   D+ +AA+IR+LLM
Sbjct: 75 ESVDEDSPEAAVIRSLLM 92


>AT3G28857.1 | Symbols:  | transcription regulator |
          chr3:10855781-10856313 REVERSE
          Length = 92

 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/78 (69%), Positives = 68/78 (87%), Gaps = 3/78 (3%)

Query: 17 ITDDQILDLVTKLQQLLPEIGNRR-SDKVSAAKVLQETCNYIRNLHREVDDLSERLSELL 75
          I+DDQ++DLV+KL+Q LPEI  RR SDKVSA+KVLQETCNYIR LHREVD+LS+RLS+LL
Sbjct: 15 ISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKLHREVDNLSDRLSQLL 74

Query: 76 ATT--DTAQAAIIRNLLM 91
           +   D+ +AA+IR+LLM
Sbjct: 75 DSVDEDSPEAAVIRSLLM 92


>AT5G15160.1 | Symbols:  | bHLH family protein |
          chr5:4921487-4922553 REVERSE
          Length = 94

 Score = 94.0 bits (232), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 64/75 (85%), Gaps = 3/75 (4%)

Query: 19 DDQILDLVTKLQQLLPEI-GNRRSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLAT 77
          DDQI DL++KL+Q +PEI  NRRS+ VSA+KVLQETCNYIRNL++E DDLS+RL++LL +
Sbjct: 18 DDQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNLNKEADDLSDRLTQLLES 77

Query: 78 TD--TAQAAIIRNLL 90
           D  + QAA+IR+L+
Sbjct: 78 IDPNSPQAAVIRSLI 92