Jatropha Genome Database

JcCA0045831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0045831.10 - phase: 0 
         (53 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47810.3 | Symbols: MAG1 | MAG1 (MAIGO 1); hydrolase/ protein...    87   3e-18
AT3G47810.1 | Symbols: MAG1, VPS29, ATVPS29 | MAG1 (MAIGO 1); hy...    87   3e-18
AT3G47810.2 | Symbols: MAG1 | MAG1 (MAIGO 1); hydrolase/ protein...    87   3e-18

>AT3G47810.3 | Symbols: MAG1 | MAG1 (MAIGO 1); hydrolase/ protein
          serine/threonine phosphatase | chr3:17637256-17639017
          REVERSE
          Length = 190

 Score = 86.7 bits (213), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 41/44 (93%), Positives = 42/44 (95%)

Query: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 44
          MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIK
Sbjct: 1  MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIK 44


>AT3G47810.1 | Symbols: MAG1, VPS29, ATVPS29 | MAG1 (MAIGO 1);
          hydrolase/ protein serine/threonine phosphatase |
          chr3:17637256-17639017 REVERSE
          Length = 190

 Score = 86.7 bits (213), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 41/44 (93%), Positives = 42/44 (95%)

Query: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 44
          MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIK
Sbjct: 1  MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIK 44


>AT3G47810.2 | Symbols: MAG1 | MAG1 (MAIGO 1); hydrolase/ protein
          serine/threonine phosphatase | chr3:17637256-17639017
          REVERSE
          Length = 190

 Score = 86.7 bits (213), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 41/44 (93%), Positives = 42/44 (95%)

Query: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 44
          MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIK
Sbjct: 1  MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIK 44