Jatropha Genome Database

JcCA0045571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0045571.10 - phase: 0 
         (175 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02570.1 | Symbols: MEE31, PMI1 | MEE31 (MATERNAL EFFECT EMBR...   218   2e-57
AT1G67070.1 | Symbols: DIN9, PMI2 | DIN9 (DARK INDUCIBLE 9); man...   212   1e-55

>AT3G02570.1 | Symbols: MEE31, PMI1 | MEE31 (MATERNAL EFFECT EMBRYO
           ARREST 31); mannose-6-phosphate isomerase |
           chr3:543463-545478 REVERSE
          Length = 432

 Score =  218 bits (554), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 101/155 (65%), Positives = 127/155 (81%), Gaps = 7/155 (4%)

Query: 21  CSVQNYDWGKIGLDSKVGRLYELNSGSQIDVGKPYAELWMGTHESGPSFVVENGVENGNP 80
           CSV++YDWGKIG DS V R+Y  NS  +ID  +PYAELWMGTHESGPS++     E+ + 
Sbjct: 25  CSVKDYDWGKIGSDSLVYRVYAANSDYEIDPTRPYAELWMGTHESGPSYL-----EDAD- 78

Query: 81  IGSHSISLKEWIFKNPNVLGDKVLDKWGCDLPFLFKVLSVAKALSIQAHPDKELAKMLHK 140
            GS+ ++L+ WI +NP  LG++VL+KWGCDLPFLFKVLSVA+ LSIQAHPDK+LAK +HK
Sbjct: 79  -GSNGVTLRSWITENPKSLGNRVLEKWGCDLPFLFKVLSVARPLSIQAHPDKKLAKKMHK 137

Query: 141 LHPDVYKDDNHKPEMALAITEFQALCGFISLKVLR 175
            HP++YKDDNHKPEMALA T+F+ALCGFI L+ L+
Sbjct: 138 AHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELK 172


>AT1G67070.1 | Symbols: DIN9, PMI2 | DIN9 (DARK INDUCIBLE 9);
           mannose-6-phosphate isomerase | chr1:25042324-25044412
           FORWARD
          Length = 441

 Score =  212 bits (539), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 100/164 (60%), Positives = 129/164 (78%), Gaps = 4/164 (2%)

Query: 13  GQRLQRLKCSVQNYDWGKIGLDSKVGRLYELNSGSQIDVGKPYAELWMGTHESGPSFVVE 72
           G+ +QRL+C V+NY+WGK+G +S V RL E N+G ++D   PYAE WMGTHESGPS V E
Sbjct: 19  GEEIQRLRCFVKNYEWGKLGPESLVARLQEANTGQRVDSEIPYAEFWMGTHESGPSHV-E 77

Query: 73  NGVENGNPIGSHS-ISLKEWIFKNPNVLGDKVLDKWGCDLPFLFKVLSVAKALSIQAHPD 131
            G  +G+ +     ++LK W+  NPN+LG KV+DKWGCDLPFLFKVLSV KALSIQAHP+
Sbjct: 78  FG--SGHGVSDKCMVTLKSWVLDNPNLLGSKVVDKWGCDLPFLFKVLSVTKALSIQAHPN 135

Query: 132 KELAKMLHKLHPDVYKDDNHKPEMALAITEFQALCGFISLKVLR 175
           K LA+ LH+  P +Y+D+NHKPE+ALA+T FQALCGF++LK L+
Sbjct: 136 KALAEKLHREDPLLYRDNNHKPEIALAVTPFQALCGFVTLKELK 179