Jatropha Genome Database

JcCA0045351.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0045351.20 - phase: 1 /TE
         (1501 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   484   e-136
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   179   1e-44
AT1G21280.1 | Symbols:  | unknown protein | chr1:7447690-7448403...   114   4e-25
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...   110   7e-24
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    84   5e-16
AT5G48050.1 | Symbols:  | unknown protein | chr5:19472661-194737...    67   9e-11
AT1G34070.1 | Symbols:  | unknown protein | chr1:12402283-124032...    64   8e-10
ATMG00300.1 | Symbols: ORF145A | hypothetical protein | chrM:896...    54   9e-07

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  484 bits (1246), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/531 (45%), Positives = 329/531 (61%), Gaps = 15/531 (2%)

Query: 924  STRDRQPPAWHQEYFMSAAVNHXXXXXXXXXXXXYPLSHYLSLSQFSLSHRAFLASITSQ 983
            S R  + PA+ Q+Y+  +  +             + +S +LS  + S  + +FL  I   
Sbjct: 34   SHRRTRKPAYLQDYYCHSVAS----------LTIHDISQFLSYEKVSPLYHSFLVCIAKA 83

Query: 984  VEPTTYSQAVQIPHWQAAMDAELQALQRNNTWSLVPLPPGHKPIGCRWVYKIKYHSDGTI 1043
             EP+TY++A +   W  AMD E+ A++  +TW +  LPP  KPIGC+WVYKIKY+SDGTI
Sbjct: 84   KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143

Query: 1044 ERYKARLVAKGYTQVEGLDYKETFSPTAKMTTLRCLLTIAAARNWFTHQLDVQNAFLHGN 1103
            ERYKARLVAKGYTQ EG+D+ ETFSP  K+T+++ +L I+A  N+  HQLD+ NAFL+G+
Sbjct: 144  ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203

Query: 1104 LQEIVYMELPPGLC-RQGE----NMVCRLNKSLYGLKQASRNWFSTFSEALASAGFAQSK 1158
            L E +YM+LPPG   RQG+    N VC L KS+YGLKQASR WF  FS  L   GF QS 
Sbjct: 204  LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSH 263

Query: 1159 ADYSLFTKQQDTSFTAVLIYVDDILVTGNSMQEIMAXXXXXXXXXXXXXXXXXGYFLGIE 1218
            +D++ F K   T F  VL+YVDDI++  N+   +                    YFLG+E
Sbjct: 264  SDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLE 323

Query: 1219 FSHSKKGIFMSQRKYALDILEDSGHTGSRPESFPMEQNVKLTLTDGEKLHDPTXXXXXXX 1278
             + S  GI + QRKYALD+L+++G  G +P S PM+ +V  +   G    D         
Sbjct: 324  IARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 383

Query: 1279 XXXXXTVTRPDIVYSVRTLSQYMHEPRKPHWEAAIRVLKYIKSTPGQGLLLPRENNLKLS 1338
                  +TR DI ++V  LSQ+   PR  H +A +++L YIK T GQGL    +  ++L 
Sbjct: 384  RLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 443

Query: 1339 AFCDSDWAGCRTTRRSISGYCIFLGSSLISWKSKKQTNVSRSSAEAEYRSMANTCLELTW 1398
             F D+ +  C+ TRRS +GYC+FLG+SLISWKSKKQ  VS+SSAEAEYR+++    E+ W
Sbjct: 444  VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMW 503

Query: 1399 IHYLLRDLKVSQTGPASLFCDNQAALHIAANPVFHERTKHIEIDCHIVREK 1449
            +    R+L++  + P  LFCDN AA+HIA N VFHERTKHIE DCH VRE+
Sbjct: 504  LAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  179 bits (454), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 129/224 (57%), Gaps = 1/224 (0%)

Query: 1175 VLIYVDDILVTGNSMQEIMAXXXXXXXXXXXXXXXXXGYFLGIEFSHSKKGIFMSQRKYA 1234
            +L+YVDDIL+TG+S   +                    YFLGI+      G+F+SQ KYA
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1235 LDILEDSGHTGSRPESFPMEQNVKLTLTDGEKLHDPTXXXXXXXXXXXXTVTRPDIVYSV 1294
              IL ++G    +P S P+   +  +++   K  DP+            T+TRPDI Y+V
Sbjct: 63   EQILNNAGMLDCKPMSTPLPLKLNSSVSTA-KYPDPSDFRSIVGALQYLTLTRPDISYAV 121

Query: 1295 RTLSQYMHEPRKPHWEAAIRVLKYIKSTPGQGLLLPRENNLKLSAFCDSDWAGCRTTRRS 1354
              + Q MHEP    ++   RVL+Y+K T   GL + + + L + AFCDSDWAGC +TRRS
Sbjct: 122  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181

Query: 1355 ISGYCIFLGSSLISWKSKKQTNVSRSSAEAEYRSMANTCLELTW 1398
             +G+C FLG ++ISW +K+Q  VSRSS E EYR++A T  ELTW
Sbjct: 182  TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>AT1G21280.1 | Symbols:  | unknown protein | chr1:7447690-7448403
           REVERSE
          Length = 237

 Score =  114 bits (285), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 23/231 (9%)

Query: 26  DPSHPYY----VHHSDQPGHMLVPVKLNGENYRSWSKAMIHALTAKNKLGFIDGSLEAP- 80
           DP  PYY    +HH       +  +  + +NY +W       L    K GFIDG+L  P 
Sbjct: 13  DPDSPYYLPPDIHHPSD--FSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPD 70

Query: 81  --SQEEKPTELALWNQCNSLILSWLTHSVEADLAEGVIHAKTAYQVWTDFKDQFSQKNAP 138
             S   +P     W QCN++++ WL +S+   L E V++A+TA+++W D +  F      
Sbjct: 71  PFSPLYQP-----WEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDL 125

Query: 139 AIFQIQKSIATISQGSMSVASYYTKLKALWDELENYR-------DPYTCNHAKAHQEQLQ 191
            I+Q+++ +AT+ QG  SV  Y+ KL  +W EL  Y            C   K  +E  +
Sbjct: 126 KIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSEYAPIPECKCGGCNCECTKRAEEARE 185

Query: 192 EDRLMQFLMG--MNESYKGVRSNILMMTPLPNVRQAYSLVIQEETQRQLSS 240
           +++  +FLMG  +N+ ++ V + I+   P P++ +A+++V   E+  +  S
Sbjct: 186 KEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMVKDAESMMKWYS 236


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
            chrM:228573-229085 REVERSE
          Length = 170

 Score =  110 bits (275), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 51/103 (49%), Positives = 68/103 (66%)

Query: 981  TSQVEPTTYSQAVQIPHWQAAMDAELQALQRNNTWSLVPLPPGHKPIGCRWVYKIKYHSD 1040
            T + EP +   A++ P W  AM  EL AL RN TW LVP P     +GC+WV+K K HSD
Sbjct: 23   TIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 82

Query: 1041 GTIERYKARLVAKGYTQVEGLDYKETFSPTAKMTTLRCLLTIA 1083
            GT++R KARLVAKG+ Q EG+ + ET+SP  +  T+R +L +A
Sbjct: 83   GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
            chrM:68918-69253 REVERSE
          Length = 111

 Score = 84.3 bits (207), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 50/76 (65%)

Query: 1284 TVTRPDIVYSVRTLSQYMHEPRKPHWEAAIRVLKYIKSTPGQGLLLPRENNLKLSAFCDS 1343
            T+TRPD+ ++V  LSQ+    R    +A  +VL Y+K T GQGL     ++L+L AF DS
Sbjct: 4    TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADS 63

Query: 1344 DWAGCRTTRRSISGYC 1359
            DWA C  TRRS++G+C
Sbjct: 64   DWASCPDTRRSVTGFC 79


>AT5G48050.1 | Symbols:  | unknown protein | chr5:19472661-19473770
           REVERSE
          Length = 369

 Score = 67.0 bits (162), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 21/199 (10%)

Query: 40  GHMLVPVKLNGENYRSWSKAMIHALTAKNKLGFIDGSLEAPSQEEKPTELALWNQCNSLI 99
            ++ V + LN  NY  W +       +   LG IDGS       EK      W + + L+
Sbjct: 20  AYIFVTLDLNKLNYDVWRELFETLCLSFGVLGHIDGSSTPTPMTEK-----RWKERDGLV 74

Query: 100 LSWLTHSVEADLAEGVIHAK-TAYQVWTDFKDQFSQKNAPAIFQIQKSIATISQGSMSVA 158
             W+  ++   L + +I    TA  +W   ++ F         Q +  + T +   +SV 
Sbjct: 75  KMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDDLSVH 134

Query: 159 SYYTKLKALWDELENYRDPYTCNHAKAHQEQLQEDRL--MQFLMGMNESYKGVRSNILMM 216
            Y  KLK+L D L N   P +             DR+  M  L G+ E Y  + + I   
Sbjct: 135 EYCQKLKSLSDLLTNVDSPIS-------------DRVLVMHLLNGLTEKYDYILNVIKHK 181

Query: 217 TPLPNVRQAYSLVIQEETQ 235
           +P P+  +A S+++ EE++
Sbjct: 182 SPFPSFTEARSMLLMEESR 200


>AT1G34070.1 | Symbols:  | unknown protein | chr1:12402283-12403209
           FORWARD
          Length = 308

 Score = 63.9 bits (154), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 19/219 (8%)

Query: 25  MDPSHPYYVHHSDQPGHMLVPVKLNGENYRSWSKAMIHALTAKNKLGFIDGSLEAPSQEE 84
           M+P   Y V  S+   H+ V + +   NY +W +  +    + + +G IDG+L   +  +
Sbjct: 5   MNPEQIYGV--SNIKSHIPVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTLLPTNAND 62

Query: 85  KPTELALWNQCNSLILSWLTHSVEADLAEG-VIHAKTAYQVWTDFKDQFSQKNAPAIFQI 143
                  W + + ++   L  ++     +G  + + T+  +W   K+QF         ++
Sbjct: 63  -----VNWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRL 117

Query: 144 QKSIATISQGSMSVASYYTKLKALWDELENYRDPYTCNHAKAHQEQLQEDRLMQFLMGMN 203
              + T   G M VA YY K+K L D L N   P T             + +M  L G+N
Sbjct: 118 DSELRTKDIGDMRVADYYRKMKKLADSLRNVDVPVT-----------DRNLVMYVLNGLN 166

Query: 204 ESYKGVRSNILMMTPLPNVRQAYSLVIQEETQRQLSSEP 242
             +  + + I    P P+   A +++ +EE + + + +P
Sbjct: 167 PKFDNIINVIKHRQPFPSFDDAATMLQEEEDRLKRAIKP 205


>ATMG00300.1 | Symbols: ORF145A | hypothetical protein |
           chrM:89617-90054 REVERSE
          Length = 145

 Score = 53.9 bits (128), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 475 ILQDLTTGKMIGWGKQHGGLYYMMQDSISPASFQVSNSPD----LWHSRLGHVSFSHFKX 530
           +L+ L   + I  G +H  LY ++Q S+      ++ +      LWHSRL H+S    + 
Sbjct: 28  VLKVLKGCRTILKGNRHDSLY-ILQGSVETGESNLAETAKDETRLWHSRLAHMSQRGMEL 86

Query: 531 XXXXXPINKETVSFHNNCSICPLAKQTRLPFPISSITTKIPFELLHCDVWGPHKIP 586
                 ++   VS    C  C   K  R+ F     TTK P + +H D+WG   +P
Sbjct: 87  LVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSVP 142