Jatropha Genome Database

JcCA0044531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0044531.10 - phase: 0 /partial
         (184 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21470.1 | Symbols: ATFMN/FHY | ATFMN/FHY (riboflavin kinase/...    98   3e-21

>AT4G21470.1 | Symbols: ATFMN/FHY | ATFMN/FHY (riboflavin kinase/FMN
           hydrolase); FMN adenylyltransferase/ riboflavin kinase |
           chr4:11431284-11433197 FORWARD
          Length = 379

 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 12/187 (6%)

Query: 1   IFIEAARRMGVDAAKCLVIEDSLXXXXXXXXXXXXXXXXPS-QSEADCSLLADSVLHSLL 59
           IF+EAA+R+  D A CLVIEDS+                PS   +      AD V++SLL
Sbjct: 155 IFLEAAKRLKKDPADCLVIEDSVPGVMAGKAAGTKVIAVPSLPKQTHLYTSADEVINSLL 214

Query: 60  EFQPEIWGLPPFDDWVDSALPIEPIYL--SILYKNGSISEVTGTMAGGGESG-----LPC 112
           + + E WGLPPF DW+++ LPI+P ++   ++   G  S+V G       +      L  
Sbjct: 215 DIRLEKWGLPPFQDWIENTLPIDPWHIGGPVIKGFGRGSKVLGIPTANLSTKDYADELVE 274

Query: 113 QVSGLYFGWTQSGVHGILKVLVGIGGDHCSCSAKRNIMFLQQICTIDEKNDDVCDEQMQL 172
             SG+YFGW      G+ K+++ IG +    + ++ I    +   + +  +D   E+++L
Sbjct: 275 HPSGVYFGWAGLAKRGVFKMVMSIGWNPYFNNKEKTI----EPWLLHDFTEDFYGEELRL 330

Query: 173 VLVGYIR 179
           ++VGYIR
Sbjct: 331 IIVGYIR 337