Jatropha Genome Database
- JcCA0044231.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0044231.20 - phase: 0
(440 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 542 e-154
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 345 3e-95
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 337 1e-92
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 327 1e-89
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 326 2e-89
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 322 2e-88
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 320 1e-87
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 319 2e-87
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 4e-87
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 317 9e-87
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 308 4e-84
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 308 6e-84
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 305 3e-83
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 303 1e-82
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 302 2e-82
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 302 3e-82
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 7e-82
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 8e-82
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 300 1e-81
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 297 1e-80
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 296 1e-80
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 296 1e-80
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 291 7e-79
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 291 8e-79
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 3e-78
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 287 8e-78
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 286 2e-77
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 3e-77
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 4e-77
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 284 6e-77
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 7e-77
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 9e-77
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 4e-76
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 281 5e-76
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 7e-76
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 9e-76
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 3e-75
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 278 5e-75
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 6e-75
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 277 9e-75
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 276 3e-74
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 4e-74
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 1e-73
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 1e-73
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 272 3e-73
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 271 6e-73
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 1e-72
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 2e-72
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 269 3e-72
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 267 9e-72
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 2e-71
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 266 3e-71
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 4e-71
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 7e-71
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 8e-71
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 1e-70
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 2e-70
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 2e-70
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 262 4e-70
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 6e-70
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 7e-70
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 9e-70
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 1e-69
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 8e-69
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 1e-68
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 1e-68
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 2e-68
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 256 2e-68
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 2e-68
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 256 3e-68
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 4e-67
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 6e-67
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 6e-67
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 9e-67
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 1e-66
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 1e-66
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 250 1e-66
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 1e-66
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 2e-66
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 3e-66
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 3e-66
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 248 4e-66
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 4e-66
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 5e-66
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 6e-66
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 245 4e-65
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 8e-65
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 8e-65
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 243 1e-64
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 243 2e-64
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 2e-64
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 3e-64
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 242 4e-64
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 5e-64
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 5e-64
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 5e-64
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 6e-64
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 6e-64
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 241 9e-64
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 1e-63
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 1e-63
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 2e-63
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 6e-63
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 237 9e-63
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 1e-62
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 2e-62
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 2e-62
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 2e-62
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 3e-62
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 4e-62
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 235 4e-62
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 5e-62
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 6e-62
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 9e-62
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 1e-61
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 1e-61
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 1e-61
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 4e-61
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 231 6e-61
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 1e-60
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 1e-60
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 1e-60
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 2e-60
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 2e-60
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 2e-60
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 9e-60
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 9e-60
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 1e-59
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 1e-59
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 2e-59
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 3e-59
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 3e-59
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 3e-59
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 4e-59
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 6e-59
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 7e-59
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 1e-58
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 3e-58
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 3e-58
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 222 3e-58
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 3e-58
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 4e-58
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 220 1e-57
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 219 2e-57
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 6e-57
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 1e-56
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 1e-56
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 3e-56
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 3e-56
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 3e-56
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 4e-56
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 6e-56
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 213 2e-55
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 3e-55
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 3e-55
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 9e-55
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 1e-54
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 1e-54
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 2e-54
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 209 3e-54
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 6e-54
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 8e-54
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 4e-53
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 4e-53
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 5e-52
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 8e-52
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 1e-51
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 1e-51
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 2e-51
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 193 2e-49
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 7e-49
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 3e-48
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 5e-48
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 6e-48
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 4e-47
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 4e-47
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 8e-47
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 181 6e-46
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 181 1e-45
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 1e-45
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 3e-45
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 1e-41
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 5e-41
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 2e-39
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 2e-39
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 160 2e-39
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 1e-36
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 4e-33
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 5e-33
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 128 8e-30
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 3e-26
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 3e-25
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 1e-24
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 3e-24
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 109 3e-24
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 3e-24
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 108 9e-24
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 3e-23
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 3e-23
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 3e-23
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 105 4e-23
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 5e-23
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 105 5e-23
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 8e-23
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 1e-22
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 4e-21
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 99 4e-21
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 99 4e-21
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 8e-21
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 97 2e-20
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 96 4e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 4e-20
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 96 5e-20
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 3e-19
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 3e-19
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 5e-19
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 92 6e-19
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 90 3e-18
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 3e-18
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 89 6e-18
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 86 6e-17
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 86 7e-17
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 84 1e-16
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 84 2e-16
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 83 3e-16
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 82 8e-16
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 79 5e-15
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 7e-15
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 79 7e-15
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 78 9e-15
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 78 9e-15
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 76 5e-14
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 76 5e-14
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 76 5e-14
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 7e-14
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 7e-14
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 7e-14
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 7e-14
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 9e-14
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 74 1e-13
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 73 3e-13
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 73 4e-13
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 5e-13
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 72 1e-12
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 69 4e-12
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 6e-12
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 69 7e-12
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 67 2e-11
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 67 3e-11
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-11
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 64 3e-10
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 63 3e-10
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 63 3e-10
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 63 3e-10
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 63 3e-10
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 61 2e-09
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 4e-09
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 59 4e-09
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 3e-08
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 6e-08
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 6e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 7e-08
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 55 1e-07
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 6e-07
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 49 7e-06
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 542 bits (1397), Expect = e-154, Method: Compositional matrix adjust.
Identities = 250/434 (57%), Positives = 341/434 (78%), Gaps = 1/434 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR G+ PDH+T+PFL K+S+ L R+LG ++H + K+G E D F+ N+LIHMY SFRD
Sbjct: 845 MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRD 904
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ARK+FD +P KNLV+WNS+LD YAK GD+ AR VFD M E+DV++WS +IDGYV++
Sbjct: 905 QASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKR 964
Query: 121 GDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G+Y++AL +F++M R+ K NEVTMVSV+CACAHLGAL++G+ +H Y++D LPLT++L
Sbjct: 965 GEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVIL 1024
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+TSL+DMYAKCG+I +A VF +K +D +WN++IGG A HG ++ESL LF +M
Sbjct: 1025 QTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRES 1084
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ PDEIT+L LL+AC+HGGLVKEAW+FF L ++G PKSEHYACMVDV++RAG V +A
Sbjct: 1085 KIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDA 1144
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ F+ ++PI+PT SMLGALLNGC+NHG L+LAETVG+KLIEL+PH DGRYVGL+NVYAI
Sbjct: 1145 HDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAIN 1204
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+++ ARSMREAME+ GVKK G+S +++ G HRF+AHDK+H S++IY +L + M
Sbjct: 1205 KQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQLTGAWM 1264
Query: 420 KHIVDYENQEYYFY 433
VDY++Q+ + +
Sbjct: 1265 NLDVDYDDQDNHCF 1278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 136/321 (42%), Gaps = 33/321 (10%)
Query: 25 KRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWN 80
K E L++ I G+ D +S L+ + + + A ++ + + + N ++
Sbjct: 229 KSERALSVFNEILSRGW-LDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYC 287
Query: 81 SMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVS 136
++ G+ K I A Q+F+ M D+ + LI G + D + AL+++ E++ S
Sbjct: 288 VLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRS 347
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
G P+ + +LC+ + L R+ + D + ++L SL + + + + EA
Sbjct: 348 GIPPDRGILGKLLCSFSEESEL--SRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEA 405
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
FI N ++G + G V E + L + H + PD + +++
Sbjct: 406 YS------------FIQN-LMGNYESDG-VSEIVKLLKD-HNKAILPDSDSLSIVINCLV 450
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTAS 313
V A + +NG+ P Y +++ M + G+ E+ + L ++ ++P+
Sbjct: 451 KANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQF 510
Query: 314 ML----GALLNGCMNHGKLDL 330
L G L C G LDL
Sbjct: 511 TLNCIYGCLAERCDFVGALDL 531
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 10/176 (5%)
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEV---TMVSVLC-ACAHLGALDKGRMMHHYVI 169
IDG ++ D L +F ++ +G P+ + ++ LC AC + A ++ + ++
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEA----DILFNEMV 641
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALH--VFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
L T+ S++D + K G I L V K DV + S+I G G
Sbjct: 642 SKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPS 701
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
E++ ++EM P+ IT++ L+ G EA +F + + M P S Y
Sbjct: 702 EAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 111/274 (40%), Gaps = 27/274 (9%)
Query: 46 FVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV---------------SWNSMLDGYAKCG 90
F+ N L+H SF I N ++ V +V S + +++ K
Sbjct: 396 FIRNDLVHEAYSF--IQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKAN 453
Query: 91 DISMARQVFDLMPEQDVLS----WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
+ MA + + + ++ ++ +I+G ++G +E+L + EM+ +G +P++ T+
Sbjct: 454 KVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLN 513
Query: 147 SVLCA----CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS 202
+ C +GALD + M Y + + T L L + A + V
Sbjct: 514 CIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGE 573
Query: 203 GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
G + + + I G + V L+LF ++ G PD I Y L+ A
Sbjct: 574 GFL--GHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTM 631
Query: 263 EAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
EA F+ + G+ P Y M+D + G++
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEI 665
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 61 IPNARKVFD-----GIPVKNLVSWNSMLDGYAKCGDISMA------RQVFDLMPEQDVLS 109
+ A VFD G+ V N ++N +L+ +K S+ +++ D D +
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFT 216
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
+ ++ Y G + AL+VF E+ G ++ + V+ C G +DK + +
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFC-KWGQVDKAFELIEMLE 275
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVF----RSGLMKPSDVFIWNSMIGGFACHGL 225
+ ++ L L+ + K I +A +F R G+ +D+ +++ +IGG H
Sbjct: 276 ERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGM--NADIALYDVLIGGLCKHKD 333
Query: 226 VKESLDLFSEMHIVGVKPD 244
++ +L L+ E+ G+ PD
Sbjct: 334 LEMALSLYLEIKRSGIPPD 352
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 15/246 (6%)
Query: 76 LVSWNSMLDGYAKCGDISMARQVF-DLMPE---QDVLSWSCLIDGYVRKGDYDEALAVFE 131
+V+ + +DG K + ++F D+ DV+++ LI + EA +F
Sbjct: 579 MVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFN 638
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
EM G KP T S++ G +D+G + ++E ++ TSL+ G
Sbjct: 639 EMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASG 698
Query: 192 AIQEALHVFRSGLMKPSDVF----IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
EA +FR MK D + + ++I G G E+L F EM ++PD
Sbjct: 699 RPSEA--IFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAV 756
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS--EHYACMVDVMARAGQVAEAYQFLCQ 305
YL+L+S+ + + F + G P S +Y V+V + V AY+FL +
Sbjct: 757 YLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTS---DVDYAYKFLSK 813
Query: 306 IPIQPT 311
+ P
Sbjct: 814 LSDPPN 819
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 51/246 (20%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
+ ++NSM+DG+ K G+I M E DV++++ LI G G EA+ +
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 131 EEMRVSGPKPNEVTMVSV---LCACAHLG-ALDKGRMMHHYVIDNELPLTLVLRTSLV-- 184
EM+ PN +T +++ LC C G AL R M ++ + + L L +S +
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSS 767
Query: 185 -DMYAKCGAIQEALH--------------------------VFRSGLMKPSDVFIWNSMI 217
++ A G +E +H F S L P + + WN +I
Sbjct: 768 ENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSDVDYAYKFLSKLSDPPN-YGWNFVI 826
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA-----------HGGLVKEA-- 264
GF+ ++S+ ++ +M G+ PD +TY L+ + + H +VK
Sbjct: 827 RGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLE 886
Query: 265 WYFFDC 270
W F C
Sbjct: 887 WDLFIC 892
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 345 bits (885), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/436 (38%), Positives = 281/436 (64%), Gaps = 4/436 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ ++PD++TFPFL KAS+ + +G H I + G+++D +V NSL+HMY++
Sbjct: 108 MLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGF 167
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A ++F + +++VSW SM+ GY KCG + AR++FD MP +++ +WS +I+GY +
Sbjct: 168 IAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKN 227
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+++A+ +FE M+ G NE MVSV+ +CAHLGAL+ G + YV+ + + + L+L
Sbjct: 228 NCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG 287
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+LVDM+ +CG I++A+HVF + +D W+S+I G A HG +++ FS+M +G
Sbjct: 288 TALVDMFWRCGDIEKAIHVFEG--LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLG 345
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
P ++T+ +LSAC+HGGLV++ ++ + K+ G+ P+ EHY C+VD++ RAG++AEA
Sbjct: 346 FIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
F+ ++ ++P A +LGALL C + ++AE VG LI+++P G YV LSN+YA
Sbjct: 406 ENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACA 465
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRF-VAHDKSHPSSEQIYMMLGFIVSQ 418
+WDK S+R+ M+ VKK PG+S +E+ G +++F + D+ HP +I I+ +
Sbjct: 466 GQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGK 525
Query: 419 MKHIVDYENQEYYFYD 434
++ I N F+D
Sbjct: 526 IRLIGYKGNTGDAFFD 541
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 146/327 (44%), Gaps = 25/327 (7%)
Query: 14 PFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY---SSFRDIPN----ARK 66
P LA +C +L + IHG++ + SD FV++ L+ + S+F N A
Sbjct: 14 PKLALLQSCSSFSDLKI-IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
+F I NL +N ++ ++ + S A + M + + + ++ E
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 127 LAVFEEMR---VSGPKPNEV----TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+ V E+ V N+V ++V + C + A GR+ + +V
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAA--AGRIFGQMGFRD-----VVS 185
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
TS+V Y KCG ++ A +F M ++F W+ MI G+A + ++++DLF M
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDE--MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE 243
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
GV +E ++++S+CAH G ++ ++ + K+ MT +VD+ R G + +A
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHG 326
+P + S +++ G HG
Sbjct: 304 IHVFEGLPETDSLS-WSSIIKGLAVHG 329
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 260/422 (61%), Gaps = 8/422 (1%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD TFPFL + L LG H I G + D FV SL++MYSS D+ +A+
Sbjct: 58 VSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQ 117
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+VFD K+L +WNS+++ YAK G I AR++FD MPE++V+SWSCLI+GYV G Y E
Sbjct: 118 RVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKE 177
Query: 126 ALAVFEEMRVSGP-----KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
AL +F EM++ P +PNE TM +VL AC LGAL++G+ +H Y+ + + +VL
Sbjct: 178 ALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLG 237
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV- 239
T+L+DMYAKCG+++ A VF + L DV +++MI A +GL E LFSEM
Sbjct: 238 TALIDMYAKCGSLERAKRVF-NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD 296
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
+ P+ +T++ +L AC H GL+ E +F + + G+TP +HY CMVD+ R+G + E
Sbjct: 297 NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A F+ +P++P + G+LL+G G + E ++LIEL+P G YV LSNVYA
Sbjct: 357 AESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAK 416
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
RW + + +R ME G+ K PG S+VE+ G +H FV D+S SE+IY ML I+ +
Sbjct: 417 TGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQR 476
Query: 419 MK 420
++
Sbjct: 477 LR 478
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 111/284 (39%), Gaps = 70/284 (24%)
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
++V+ MR P+ T +L + + L G+ H ++ L +RTSL++M
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 187 YAKCGAIQEALHVF-------------------RSGL----------MKPSDVFIWNSMI 217
Y+ CG ++ A VF ++GL M +V W+ +I
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 218 GGFACHGLVKESLDLFSEMHI-----VGVKPDEITYLNLLSACAH-GGLVKEAWY----- 266
G+ G KE+LDLF EM + V+P+E T +LSAC G L + W
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 267 -------------FFDCLGKNGMTPKSEH-------------YACMVDVMARAGQVAEAY 300
D K G +++ Y+ M+ +A G E +
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 301 QFLCQIP----IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
Q ++ I P + +L C++ G ++ ++ + +IE
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE 330
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 159/417 (38%), Positives = 261/417 (62%), Gaps = 4/417 (0%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V H+T + A A + E G + YI + + ++N+++ MY+ I +A+
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
++FD + K+ V+W +MLDGYA D AR+V + MP++D+++W+ LI Y + G +E
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347
Query: 126 ALAVFEEMRVS-GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
AL VF E+++ K N++T+VS L ACA +GAL+ GR +H Y+ + + + + ++L+
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MY+KCG ++++ VF S ++ DVF+W++MIGG A HG E++D+F +M VKP+
Sbjct: 408 HMYSKCGDLEKSREVFNS--VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+T+ N+ AC+H GLV EA F + N G+ P+ +HYAC+VDV+ R+G + +A +F+
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+PI P+ S+ GALL C H L+LAE +L+ELEP DG +V LSN+YA +W+
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWE 585
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+R+ M G+KK PG S +E+ G +H F++ D +HP SE++Y L ++ ++K
Sbjct: 586 NVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK 642
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 175/354 (49%), Gaps = 65/354 (18%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
+P+ TFPFL KA+A + LG ++HG K+ SD FV+NSLIH Y S
Sbjct: 128 YPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFS--------- 178
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
CGD+ A +VF + E+DV+SW+ +I+G+V+KG D+A
Sbjct: 179 ----------------------CGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
L +F++M K + VTMV VL ACA + L+ GR + Y+ +N + + L L +++DM
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDM 276
Query: 187 YAKCGAIQEALHVFRS-----------------------------GLMKPSDVFIWNSMI 217
Y KCG+I++A +F + M D+ WN++I
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336
Query: 218 GGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
+ +G E+L +F E+ + +K ++IT ++ LSACA G ++ + + K+G+
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT---ASMLGAL-LNGCMNHG 326
+ ++ + ++ G + ++ + + + ++M+G L ++GC N
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSV 148
+ AR+VFD +P+ + +W+ LI Y D ++ F +M S PN+ T +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ A A + +L G+ +H + + + + + SL+ Y CG + A VF + +K
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTT--IKEK 195
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
DV WNSMI GF G ++L+LF +M VK +T + +LSACA
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA 243
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 326 bits (835), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 249/398 (62%), Gaps = 3/398 (0%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
TFP L KA + L E IH ITK GYE+D + NSLI+ Y+ + A +FD I
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI 176
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P + VSWNS++ GY K G + +A +F M E++ +SW+ +I GYV+ EAL +F
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
EM+ S +P+ V++ + L ACA LGAL++G+ +H Y+ + + VL L+DMYAKCG
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCG 296
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
++EAL VF++ +K V W ++I G+A HG +E++ F EM +G+KP+ IT+ +
Sbjct: 297 EMEEALEVFKN--IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAV 354
Query: 252 LSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
L+AC++ GLV+E F + ++ + P EHY C+VD++ RAG + EA +F+ ++P++P
Sbjct: 355 LTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKP 414
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMRE 370
A + GALL C H ++L E +G LI ++P+ GRYV +N++A+ ++WDKA R
Sbjct: 415 NAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRR 474
Query: 371 AMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQI 408
M+ GV K PG S + + G H F+A D+SHP E+I
Sbjct: 475 LMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 34/263 (12%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A+ VFD D W+ +I G+ + + +L +++ M S N T S+L AC++
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 155 LGALDKGRMMH--------------------HYVIDNELPLTLVL-----------RTSL 183
L A ++ +H Y + L +L S+
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ Y K G + AL +FR M + W +MI G+ + KE+L LF EM V+P
Sbjct: 188 IKGYVKAGKMDIALTLFRK--MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
D ++ N LSACA G +++ + L K + S ++D+ A+ G++ EA +
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 304 CQIPIQPTASMLGALLNGCMNHG 326
I + + AL++G HG
Sbjct: 306 KNIK-KKSVQAWTALISGYAYHG 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M V PD+++ A A L E G IH Y+ K D + LI MY+ +
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A +VF I K++ +W +++ GYA
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYA-------------------------------YH 326
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV-IDNELPLTLVL 179
G EA++ F EM+ G KPN +T +VL AC++ G +++G+++ + + D L T+
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEH 386
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+VD+ + G + EA + +KP+ V IW +++ H
Sbjct: 387 YGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV-IWGALLKACRIH 429
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 322 bits (826), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/432 (38%), Positives = 255/432 (59%), Gaps = 3/432 (0%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV PD +T L + + L G + Y+ + G + N+L+ M+S DI A
Sbjct: 252 GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R++FD + + +VSW +M+ GYA+CG + ++R++FD M E+DV+ W+ +I G V+
Sbjct: 312 RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+ALA+F+EM+ S KP+E+TM+ L AC+ LGALD G +H Y+ L L + L TSLV
Sbjct: 372 DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLV 431
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAKCG I EAL VF ++ + + ++IGG A HG ++ F+EM G+ PD
Sbjct: 432 DMYAKCGNISEALSVFHG--IQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 245 EITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
EIT++ LLSAC HGG+++ YF + + P+ +HY+ MVD++ RAG + EA + +
Sbjct: 490 EITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+P++ A++ GALL GC HG ++L E +KL+EL+P G YV L +Y W+
Sbjct: 550 ESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWE 609
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIV 423
A+ R M GV+K PG S +E++G + F+ DKS P SE+IY L + M+ +
Sbjct: 610 DAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRSSL 669
Query: 424 DYENQEYYFYDN 435
EY +N
Sbjct: 670 SVLFSEYEITNN 681
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 182/372 (48%), Gaps = 64/372 (17%)
Query: 1 MLRVGVF---PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
MLR G PDH T+P L K A L LG I G++ K E V N+ IHM++S
Sbjct: 144 MLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFAS 203
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
CGD+ AR+VFD P +D++SW+CLI+GY
Sbjct: 204 -------------------------------CGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
+ G+ ++A+ V++ M G KP++VTM+ ++ +C+ LG L++G+ + YV +N L +T+
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 178 VLRTSLVDMYAKCGAIQEALHVF-------------------RSGL----------MKPS 208
L +L+DM++KCG I EA +F R GL M+
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
DV +WN+MIGG +++L LF EM KPDEIT ++ LSAC+ G + +
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKL 328
+ K ++ +VD+ A+ G ++EA I + + + A++ G HG
Sbjct: 413 RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYT-AIIGGLALHGDA 471
Query: 329 DLAETVGRKLIE 340
A + ++I+
Sbjct: 472 STAISYFNEMID 483
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 117/244 (47%), Gaps = 10/244 (4%)
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG---PKPNEVTMVSVLCACAHLGALDKGR 162
++ SW+ I G+ + E+ ++++M G +P+ T + CA L G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 163 MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC 222
M+ +V+ L L + + + M+A CG ++ A VF ++ D+ WN +I G+
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR--DLVSWNCLINGYKK 234
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH 282
G ++++ ++ M GVKPD++T + L+S+C+ G + F++ + +NG+
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 283 YACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
++D+ ++ G + EA + + + S +++G G LD V RKL +
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWT-TMISGYARCGLLD----VSRKLFDDM 349
Query: 343 PHQD 346
+D
Sbjct: 350 EEKD 353
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 320 bits (819), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/430 (38%), Positives = 255/430 (59%), Gaps = 17/430 (3%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ TFP + KA A K + G IHG K G+ D FV ++L+ MY + +AR
Sbjct: 124 VEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDAR 183
Query: 66 KVF-DGIPVKNLVS-------------WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWS 111
+F I K++V WN M+DGY + GD AR +FD M ++ V+SW+
Sbjct: 184 VLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWN 243
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
+I GY G + +A+ VF EM+ +PN VT+VSVL A + LG+L+ G +H Y D+
Sbjct: 244 TMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS 303
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
+ + VL ++L+DMY+KCG I++A+HVF + +V W++MI GFA HG +++D
Sbjct: 304 GIRIDDVLGSALIDMYSKCGIIEKAIHVFER--LPRENVITWSAMINGFAIHGQAGDAID 361
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVM 290
F +M GV+P ++ Y+NLL+AC+HGGLV+E YF + +G+ P+ EHY CMVD++
Sbjct: 362 CFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLL 421
Query: 291 ARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYV 350
R+G + EA +F+ +PI+P + ALL C G +++ + V L+++ PH G YV
Sbjct: 422 GRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYV 481
Query: 351 GLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYM 410
LSN+YA W + MR M+ ++K PG S +++ G LH FV D SHP +++I
Sbjct: 482 ALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINS 541
Query: 411 MLGFIVSQMK 420
ML I +++
Sbjct: 542 MLVEISDKLR 551
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 149/370 (40%), Gaps = 96/370 (25%)
Query: 13 FPFLAKASACLLKRELGLAIHGYITKAGYESD--------RFVSNSLIHMYSSFRDIPNA 64
FP + + C R+L IH K+G D RF + S +H RD+ A
Sbjct: 27 FP---QINNCRTIRDLS-QIHAVFIKSGQMRDTLAAAEILRFCATSDLH----HRDLDYA 78
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
K+F+ +P +N SWN+++ G++ + D D
Sbjct: 79 HKIFNQMPQRNCFSWNTIIRGFS--------------------------------ESDED 106
Query: 125 EALAV----FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+AL +E M +PN T SVL ACA G + +G+ +H + +
Sbjct: 107 KALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVM 166
Query: 181 TSLVDMYAKCGAIQEALHVFRSGL------------------------------------ 204
++LV MY CG +++A +F +
Sbjct: 167 SNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKA 226
Query: 205 -------MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
M+ V WN+MI G++ +G K+++++F EM ++P+ +T +++L A +
Sbjct: 227 ARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISR 286
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
G ++ + +G+ + ++D+ ++ G + +A ++P + + A
Sbjct: 287 LGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVIT-WSA 345
Query: 318 LLNGCMNHGK 327
++NG HG+
Sbjct: 346 MINGFAIHGQ 355
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 33/228 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + + P+++T + A + L ELG +H Y +G D + ++LI MYS
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A VF+ +P +N+++W++M++G+A G +
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHG----------------------------QA 356
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-NELPLTLVL 179
GD A+ F +MR +G +P++V +++L AC+H G +++GR ++ + L +
Sbjct: 357 GD---AIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEH 413
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+VD+ + G + EA + +KP DV IW +++G G V+
Sbjct: 414 YGCMVDLLGRSGLLDEAEEFILNMPIKPDDV-IWKALLGACRMQGNVE 460
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/402 (39%), Positives = 248/402 (61%), Gaps = 3/402 (0%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ T FL +A L RE GL +HG + G+++D V LI +Y+ + + KV
Sbjct: 106 PDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKV 165
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F+ IP + V +M+ A+CGD+ AR++F+ MPE+D ++W+ +I GY + G+ EAL
Sbjct: 166 FNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREAL 225
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
VF M++ G K N V M+SVL AC LGALD+GR H Y+ N++ +T+ L T+LVD+Y
Sbjct: 226 NVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLY 285
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AKCG +++A+ VF M+ +V+ W+S + G A +G ++ L+LFS M GV P+ +T
Sbjct: 286 AKCGDMEKAMEVFWG--MEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
++++L C+ G V E FD + G+ P+ EHY C+VD+ ARAG++ +A + Q+
Sbjct: 344 FVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
P++P A++ +LL+ + L+L +K++ELE G YV LSN+YA WD
Sbjct: 404 PMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVS 463
Query: 367 SMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQI 408
+R++M+ GV+K PG S +E++G +H F DKSHP QI
Sbjct: 464 HVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQI 505
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 318 bits (815), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/427 (37%), Positives = 256/427 (59%), Gaps = 3/427 (0%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
PD TFPF+ K+ A L LG +HG++ K G N+LI MY F D+ +A K
Sbjct: 106 LPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHK 165
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
VFD + ++++SWNS+L GYA+ G + A+ +F LM ++ ++SW+ +I GY G Y EA
Sbjct: 166 VFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEA 225
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
+ F EM+++G +P+E++++SVL +CA LG+L+ G+ +H Y + +L++M
Sbjct: 226 MDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEM 285
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
Y+KCG I +A+ +F G M+ DV W++MI G+A HG +++ F+EM VKP+ I
Sbjct: 286 YSKCGVISQAIQLF--GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
T+L LLSAC+H G+ +E +FD + ++ + PK EHY C++DV+ARAG++ A +
Sbjct: 344 TFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKT 403
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKA 365
+P++P + + G+LL+ C G LD+A L+ELEP G YV L+N+YA +W+
Sbjct: 404 MPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDV 463
Query: 366 RSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDY 425
+R+ + +KK+PG S +E++ + FV+ D S P +I ++L S V
Sbjct: 464 SRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSHQDQDVIT 523
Query: 426 ENQEYYF 432
N F
Sbjct: 524 NNNALAF 530
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 35/254 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ PD ++ + + A L ELG IH Y + G+ V N+LI MYS
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A ++F + K+++SW++M+ GYA
Sbjct: 292 ISQAIQLFGQMEGKDVISWSTMISGYA-------------------------------YH 320
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVL 179
G+ A+ F EM+ + KPN +T + +L AC+H+G +G R D ++ +
Sbjct: 321 GNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEH 380
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
L+D+ A+ G ++ A+ + ++ MKP D IW S++ +C + L + H+V
Sbjct: 381 YGCLIDVLARAGKLERAVEITKTMPMKP-DSKIWGSLLS--SCRTPGNLDVALVAMDHLV 437
Query: 240 GVKPDEITYLNLLS 253
++P+++ LL+
Sbjct: 438 ELEPEDMGNYVLLA 451
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 133/297 (44%), Gaps = 36/297 (12%)
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
NA + G+ + + M+D K D+ A ++F+ + +V ++ +I Y
Sbjct: 30 NASIIIHGLSQSSFMV-TKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSL 88
Query: 123 YDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
Y + + +++++ R S P+ T + +CA LG+ G+ +H ++ +V
Sbjct: 89 YCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTEN 148
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK-------------- 227
+L+DMY K + +A VF M DV WNS++ G+A G +K
Sbjct: 149 ALIDMYMKFDDLVDAHKVFDE--MYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 228 -----------------ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
E++D F EM + G++PDEI+ +++L +CA G ++ +
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 271 LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ G ++ ++++ ++ G +++A Q Q+ + S +++G HG
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVIS-WSTMISGYAYHGN 322
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 317 bits (812), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 254/413 (61%), Gaps = 3/413 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V P +T + A + + ++L +H Y+++ E + N+L++ Y++ +
Sbjct: 227 MERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGE 286
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A ++F + ++++SW S++ GY + G++ +AR FD MP +D +SW+ +IDGY+R
Sbjct: 287 MDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRA 346
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++E+L +F EM+ +G P+E TMVSVL ACAHLG+L+ G + Y+ N++ +V+
Sbjct: 347 GCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVG 406
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMY KCG ++A VF M D F W +M+ G A +G +E++ +F +M +
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHD--MDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMS 464
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEA 299
++PD+ITYL +LSAC H G+V +A FF + + + P HY CMVD++ RAG V EA
Sbjct: 465 IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEA 524
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y+ L ++P+ P + + GALL H +AE +K++ELEP Y L N+YA
Sbjct: 525 YEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGC 584
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
+RW R +R + + +KK+PG+S +E++G H FVA DKSH SE+IYM L
Sbjct: 585 KRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 637
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 176/408 (43%), Gaps = 107/408 (26%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRE-----LGLAIHGYITKAGYESDRFVSNSLIHMY 55
ML+ GV PD TFPFL LKR+ G +H ++ K G S+ +V N+L+ MY
Sbjct: 125 MLKEGVTPDSHTFPFLLNG----LKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMY 180
Query: 56 SSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLID 115
S CG + MAR VFD ++DV SW+ +I
Sbjct: 181 SL-------------------------------CGLMDMARGVFDRRCKEDVFSWNLMIS 209
Query: 116 GYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
GY R +Y+E++ + EM + P VT++ VL AC+ + D + +H YV + +
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK-------- 227
+L L +LV+ YA CG + A+ +FRS MK DV W S++ G+ G +K
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRS--MKARDVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 228 -----------------------ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
ESL++F EM G+ PDE T +++L+ACAH G ++
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 265 WYFFDCLGKN-------------------GMTPKSEH------------YACMVDVMARA 293
+ + KN G + K++ + MV +A
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 294 GQVAEAYQFLCQ---IPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
GQ EA + Q + IQP +L+ C + G +D A K+
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 9/261 (3%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
K V W S L G+ +S A ++F +PE DV+ W+ +I G+ + E + ++ M
Sbjct: 71 KLFVFWCSRLGGH-----VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM 125
Query: 134 RVSGPKPNEVTMVSVLCACAHL-GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
G P+ T +L GAL G+ +H +V+ L L ++ +LV MY+ CG
Sbjct: 126 LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGL 185
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ A VF DVF WN MI G+ +ES++L EM V P +T L +L
Sbjct: 186 MDMARGVFDRRC--KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVL 243
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
SAC+ + + + P +V+ A G++ A + + +
Sbjct: 244 SACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
Query: 313 SMLGALLNGCMNHGKLDLAET 333
S +++ G + G L LA T
Sbjct: 304 SWT-SIVKGYVERGNLKLART 323
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 308 bits (789), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 257/423 (60%), Gaps = 9/423 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L + P+ TF L K+ C K G IH ++ K G D +V+ L+ +Y+ D
Sbjct: 121 LLSSEINPNEFTFSSLLKS--CSTKS--GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGD 176
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A+KVFD +P ++LVS +M+ YAK G++ AR +FD M E+D++SW+ +IDGY +
Sbjct: 177 VVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQH 236
Query: 121 GDYDEALAVFEEMRVSG-PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G ++AL +F+++ G PKP+E+T+V+ L AC+ +GAL+ GR +H +V + + L + +
Sbjct: 237 GFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKV 296
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH-I 238
T L+DMY+KCG+++EA+ VF K D+ WN+MI G+A HG +++L LF+EM I
Sbjct: 297 CTGLIDMYSKCGSLEEAVLVFNDTPRK--DIVAWNAMIAGYAMHGYSQDALRLFNEMQGI 354
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVA 297
G++P +IT++ L ACAH GLV E F+ +G+ G+ PK EHY C+V ++ RAGQ+
Sbjct: 355 TGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLK 414
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
AY+ + + + + + ++L C HG L + + LI L G YV LSN+YA
Sbjct: 415 RAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYA 474
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
++ +R M+ G+ K PG S +E+ +H F A D+ H S++IY ML I
Sbjct: 475 SVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISE 534
Query: 418 QMK 420
++K
Sbjct: 535 RIK 537
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 124/285 (43%), Gaps = 39/285 (13%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
PV NL + YA G I + +F + D+ ++ I+ G D+A ++
Sbjct: 64 PVLNL----KLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYV 119
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
++ S PNE T S+L +C + G+++H +V+ L + + T LVD+YAK G
Sbjct: 120 QLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGG 175
Query: 192 AIQEALHVF-----RSGL------------------------MKPSDVFIWNSMIGGFAC 222
+ A VF RS + M D+ WN MI G+A
Sbjct: 176 DVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQ 235
Query: 223 HGLVKESLDLFSEMHIVGV-KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE 281
HG ++L LF ++ G KPDEIT + LSAC+ G ++ + + + + +
Sbjct: 236 HGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK 295
Query: 282 HYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
++D+ ++ G + EA P + + A++ G HG
Sbjct: 296 VCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW-NAMIAGYAMHG 339
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 308 bits (788), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 164/427 (38%), Positives = 256/427 (59%), Gaps = 11/427 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASAC----LLKRELGLAIHGYITKAGYESDR-FVSNSLIHMY 55
M GV P+H+TF +A S C LG +HGY K G + + V ++I MY
Sbjct: 62 MTLAGVEPNHITF--IALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMY 119
Query: 56 SSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLID 115
S AR VFD + KN V+WN+M+DGY + G + A ++FD MPE+D++SW+ +I+
Sbjct: 120 SKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMIN 179
Query: 116 GYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
G+V+KG +EAL F EM++SG KP+ V +++ L AC +LGAL G +H YV+ +
Sbjct: 180 GFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKN 239
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
+ + SL+D+Y +CG ++ A VF + M+ V WNS+I GFA +G ESL F +
Sbjct: 240 NVRVSNSLIDLYCRCGCVEFARQVFYN--MEKRTVVSWNSVIVGFAANGNAHESLVYFRK 297
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAG 294
M G KPD +T+ L+AC+H GLV+E +F + + ++P+ EHY C+VD+ +RAG
Sbjct: 298 MQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAG 357
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHG-KLDLAETVGRKLIELEPHQDGRYVGLS 353
++ +A + + +P++P ++G+LL C NHG + LAE + + L +L YV LS
Sbjct: 358 RLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILS 417
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLG 413
N+YA +W+ A MR M+ +G+KK PG+S +E+ +H F+A D +H + I +L
Sbjct: 418 NMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLE 477
Query: 414 FIVSQMK 420
I S ++
Sbjct: 478 LISSDLR 484
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 104/245 (42%), Gaps = 40/245 (16%)
Query: 105 QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL--GALDKGR 162
+ +SW+ I+ R G EA F +M ++G +PN +T +++L C G+ G
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 163 MMHHYVIDNELPLTLVL-RTSLVDMYAKCGAIQEALHVF-------------------RS 202
++H Y L V+ T+++ MY+K G ++A VF RS
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 203 GL----------MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
G M D+ W +MI GF G +E+L F EM I GVKPD + + L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 253 SACAH-GGLVKEAW---YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI 308
+AC + G L W Y KN + + ++D+ R G V A Q +
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNS----LIDLYCRCGCVEFARQVFYNMEK 269
Query: 309 QPTAS 313
+ S
Sbjct: 270 RTVVS 274
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 305 bits (782), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/417 (37%), Positives = 252/417 (60%), Gaps = 10/417 (2%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY-SSFRDIPNARK 66
P+H +P + K++ L +H ++ K+G+ V +L+H Y SS I AR+
Sbjct: 124 PNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQ 183
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
+FD + +N+VSW +ML GYA+ GDIS A +F+ MPE+DV SW+ ++ + G + EA
Sbjct: 184 LFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEA 243
Query: 127 LAVFEEMRVSGP--KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+++F M ++ P +PNEVT+V VL ACA G L + +H + +L + + SLV
Sbjct: 244 VSLFRRM-INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLV 302
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM---HIVGV 241
D+Y KCG ++EA VF+ K + WNSMI FA HG +E++ +F EM +I +
Sbjct: 303 DLYGKCGNLEEASSVFKMASKK--SLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDI 360
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAY 300
KPD IT++ LL+AC HGGLV + +FD + + G+ P+ EHY C++D++ RAG+ EA
Sbjct: 361 KPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEAL 420
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ + + ++ ++ G+LLN C HG LDLAE + L+ L P+ G ++N+Y
Sbjct: 421 EVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMG 480
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
W++AR R+ ++ K PG+S +E+ +H+F + DKSHP +E+IYM+L ++S
Sbjct: 481 NWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 121/288 (42%), Gaps = 39/288 (13%)
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY--DEALAVFEEM-RVSGPKPNEVTMVS 147
++S AR +FD + ++ ++ Y A + F M S P+PN
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM--------------------- 186
VL + +L + ++H ++ + L +V++T+L+
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 187 -----------YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
YA+ G I A+ +F M DV WN+++ +GL E++ LF
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFED--MPERDVPSWNAILAACTQNGLFLEAVSLFRR 249
Query: 236 M-HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
M + ++P+E+T + +LSACA G ++ A + ++ +VD+ + G
Sbjct: 250 MINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCG 309
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
+ EA ++ + + + +++N HG+ + A V ++++L
Sbjct: 310 NLEEASSVF-KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLN 356
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/419 (38%), Positives = 247/419 (58%), Gaps = 4/419 (0%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P H TF F+ ASA +H ++G+ESD F +LI Y+ + A
Sbjct: 77 GLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCA 136
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R+VFD + +++ WN+M+ GY + GD+ A ++FD MP ++V SW+ +I G+ + G+Y
Sbjct: 137 RRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYS 196
Query: 125 EALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EAL +F M + KPN +T+VSVL ACA+LG L+ GR + Y +N + + +
Sbjct: 197 EALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNAT 256
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
++MY+KCG I A +F L ++ WNSMIG A HG E+L LF++M G KP
Sbjct: 257 IEMYSKCGMIDVAKRLFEE-LGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKP 315
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQF 302
D +T++ LL AC HGG+V + F + + + ++PK EHY CM+D++ R G++ EAY
Sbjct: 316 DAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDL 375
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRW 362
+ +P++P A + G LL C HG +++AE L +LEP G V +SN+YA +W
Sbjct: 376 IKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKW 435
Query: 363 DKARSMREAMERMGVKKSPGYS-FVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
D MR+ M++ + K+ GYS FVE+ +H+F DKSHP S +IY +L I +MK
Sbjct: 436 DGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 302 bits (774), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/431 (39%), Positives = 259/431 (60%), Gaps = 9/431 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAG--YESDRFVSNSLIHMYSSF 58
M+ G+ PD T L L LG +HG+I + G Y S+ +SN+L+ MY
Sbjct: 223 MVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKC 282
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
++ A++ FD + K++ SWN+M+ G+ + GD+ A+ VFD MP++D++SW+ L+ GY
Sbjct: 283 KESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYS 342
Query: 119 RKG-DYDEALAVFEEMR-VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+KG D +F EM V KP+ VTMVS++ A+ G L GR +H VI +L
Sbjct: 343 KKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD 402
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
L ++L+DMY KCG I+ A VF++ K DV +W SMI G A HG +++L LF M
Sbjct: 403 AFLSSALIDMYCKCGIIERAFMVFKTATEK--DVALWTSMITGLAFHGNGQQALQLFGRM 460
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQ 295
GV P+ +T L +L+AC+H GLV+E + F+ + K G P++EHY +VD++ RAG+
Sbjct: 461 QEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGR 520
Query: 296 VAEAYQFLCQ-IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
V EA + + +P++P+ SM G++L+ C ++ AE +L++LEP ++G YV LSN
Sbjct: 521 VEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSN 580
Query: 355 VYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDK-SHPSSEQIYMMLG 413
+YA RW + REAME GVKK+ GYS V LHRFVA +K +HP +I +L
Sbjct: 581 IYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQ 640
Query: 414 FIVSQMKHIVD 424
+ ++MK +D
Sbjct: 641 HLYNEMKPKLD 651
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 165/362 (45%), Gaps = 73/362 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R V PD TF +L KAS+ L + + IH +I +G S + N L
Sbjct: 124 MIRHRVSPDRQTFLYLMKASSFLSEVK---QIHCHIIVSGCLS---LGNYL--------- 168
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
WNS++ Y + G+ +A +VF MP DV S++ +I GY ++
Sbjct: 169 ------------------WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL---TL 177
G EAL ++ +M G +P+E T++S+L C HL + G+ +H + I+ P+ L
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGW-IERRGPVYSSNL 269
Query: 178 VLRTSLVDMYAKC-------------------------------GAIQEALHVFRSGLMK 206
+L +L+DMY KC G ++ A VF M
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQ--MP 327
Query: 207 PSDVFIWNSMIGGFACHGLVKESL-DLFSEMHIV-GVKPDEITYLNLLSACAHGGLVKEA 264
D+ WNS++ G++ G + ++ +LF EM IV VKPD +T ++L+S A+ G +
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
+ + + + + + ++D+ + G + A+ + + ++ +++ G
Sbjct: 388 RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF-KTATEKDVALWTSMITGLAF 446
Query: 325 HG 326
HG
Sbjct: 447 HG 448
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 250/433 (57%), Gaps = 10/433 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAG-YESDRFVSNSLIHMYSSFR 59
ML V PD +T + A A L ++G +HG + K +D +SN+ + MY+
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
I AR +FD +P++N+++ SM+ GYA AR +F M E++V+SW+ LI GY +
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT--- 176
G+ +EAL++F ++ P + ++L ACA L L G H +V+ +
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423
Query: 177 ---LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+ + SL+DMY KCG ++E VFR M D WN+MI GFA +G E+L+LF
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRK--MMERDCVSWNAMIIGFAQNGYGNEALELF 481
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMAR 292
EM G KPD IT + +LSAC H G V+E ++F + ++ G+ P +HY CMVD++ R
Sbjct: 482 REMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541
Query: 293 AGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGL 352
AG + EA + ++P+QP + + G+LL C H + L + V KL+E+EP G YV L
Sbjct: 542 AGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLL 601
Query: 353 SNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
SN+YA +W+ ++R++M + GV K PG S++++ G H F+ DKSHP +QI+ +L
Sbjct: 602 SNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLL 661
Query: 413 GFIVSQMKHIVDY 425
++++M+ D+
Sbjct: 662 DILIAEMRPEQDH 674
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 150/289 (51%), Gaps = 23/289 (7%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
+H + K+G+ ++ F+ N LI YS + + R+VFD +P +N+ +WNS++ G K G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+ A +F MPE+D +W+ ++ G+ + +EAL F M G NE + SVL A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
C+ L ++KG +H + + + + ++LVDMY+KCG + +A VF M +V
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE--MGDRNVV 219
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA-----------HGGL 260
WNS+I F +G E+LD+F M V+PDE+T +++SACA HG +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 261 VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
VK D + N VD+ A+ ++ EA +PI+
Sbjct: 280 VKNDKLRNDIILSNA----------FVDMYAKCSRIKEARFIFDSMPIR 318
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 61/286 (21%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G + +F + A + L G+ +H I K+ + SD ++ ++L+ MYS +
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A++VFD + +N+VSWNS++ +C + +
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLI---------------------------TC----FEQN 231
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVL 179
G EAL VF+ M S +P+EVT+ SV+ ACA L A+ G+ +H V+ N+ L ++L
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 180 RTSLVDMYAKCGAIQEALHVFRS-----------------------------GLMKPSDV 210
+ VDMYAKC I+EA +F S M +V
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 351
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
WN++I G+ +G +E+L LF + V P ++ N+L ACA
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 301 bits (770), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 255/430 (59%), Gaps = 12/430 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ V PD+ + KA + RE IH + K G+ S R V ++ +Y +
Sbjct: 164 MIHNSVLPDNYVITSVLKACDLKVCRE----IHAQVLKLGFGSSRSVGLKMMEIYGKSGE 219
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ NA+K+FD +P ++ V+ M++ Y++CG I A ++F + +D + W+ +IDG VR
Sbjct: 220 LVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRN 279
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ ++AL +F EM++ NE T V VL AC+ LGAL+ GR +H +V + + L+ +
Sbjct: 280 KEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVG 339
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L++MY++CG I EA VFR +M+ DV +N+MI G A HG E+++ F +M G
Sbjct: 340 NALINMYSRCGDINEARRVFR--VMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG 397
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
+P+++T + LL+AC+HGGL+ F+ + + + P+ EHY C+VD++ R G++ EA
Sbjct: 398 FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 457
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y+F+ IPI+P MLG LL+ C HG ++L E + ++L E E G YV LSN+YA
Sbjct: 458 YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASS 517
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+W ++ +RE+M G++K PG S +E+ +H F+ D +HP E IY L ++
Sbjct: 518 GKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRL----QEL 573
Query: 420 KHIVDY-ENQ 428
I+ + ENQ
Sbjct: 574 NRILRFKENQ 583
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 145/351 (41%), Gaps = 43/351 (12%)
Query: 31 AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
+IH I + ++ D FV LI + S+ + A VF + N+ + +M+DG+ G
Sbjct: 93 SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSG 152
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
+ ++ M VL + +I ++ D + ++ G + + ++
Sbjct: 153 RSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMME 212
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
G L + M + D + V T +++ Y++CG I+EAL +F+ +K D
Sbjct: 213 IYGKSGELVNAKKMFDEMPDRD----HVAATVMINCYSECGFIKEALELFQD--VKIKDT 266
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
W +MI G + + ++L+LF EM + V +E T + +LSAC+ G ++ +
Sbjct: 267 VCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSF 326
Query: 271 LGKNGMTPKSEHYACMVDVMARAGQVAEA------------------------------- 299
+ M + ++++ +R G + EA
Sbjct: 327 VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 386
Query: 300 ---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV---GRKLIELEPH 344
++ + +P L ALLN C + G LD+ V +++ +EP
Sbjct: 387 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQ 437
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 300 bits (769), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 248/408 (60%), Gaps = 5/408 (1%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD TFPF+ K + + G IHG + G++S V LI MY S + +ARK+
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP--EQDVLSWSCLIDGYVRKGDYDE 125
FD + VK++ WN++L GY K G++ AR + ++MP ++ +SW+C+I GY + G E
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A+ VF+ M + +P+EVT+++VL ACA LG+L+ G + YV + + L +++D
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVID 293
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MYAK G I +AL VF + +V W ++I G A HG E+L +F+ M GV+P++
Sbjct: 294 MYAKSGNITKALDVFEC--VNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPND 351
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+T++ +LSAC+H G V F+ + K G+ P EHY CM+D++ RAG++ EA + +
Sbjct: 352 VTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIK 411
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
+P + A++ G+LL H L+L E +LI+LEP+ G Y+ L+N+Y+ RWD+
Sbjct: 412 SMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDE 471
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
+R MR M+ +GVKK G S +E+ +++F++ D +HP E+I+ +L
Sbjct: 472 SRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEIL 519
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 33/224 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V PD +T + A A L ELG I Y+ G ++N++I MY+ +
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A VF+ + +N+V+W +++ G A
Sbjct: 301 ITKALDVFECVNERNVVTWTTIIAGLAT-------------------------------H 329
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVL 179
G EALA+F M +G +PN+VT +++L AC+H+G +D G R+ + + +
Sbjct: 330 GHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEH 389
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
++D+ + G ++EA V +S K ++ IW S++ H
Sbjct: 390 YGCMIDLLGRAGKLREADEVIKSMPFK-ANAAIWGSLLAASNVH 432
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A+ V+ ++ KP+ T VL + + GR +H V+ ++ + T L+
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSM----------------------------- 216
MY CG + +A +F L+K DV +WN++
Sbjct: 160 MYFSCGGLGDARKMFDEMLVK--DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVS 217
Query: 217 ----IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
I G+A G E++++F M + V+PDE+T L +LSACA G ++ +
Sbjct: 218 WTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVD 277
Query: 273 KNGMTPKSEHYACMVDVMARAGQVAEA 299
GM ++D+ A++G + +A
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKA 304
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 300 bits (767), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 244/417 (58%), Gaps = 35/417 (8%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD T+PFL KA + LG IH + ++G+ S +V NSL+H+Y
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLY---------- 166
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
A CGD++ A +VFD MPE+D+++W+ +I+G+ G +E
Sbjct: 167 ---------------------ANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
ALA++ EM G KP+ T+VS+L ACA +GAL G+ +H Y+I L L L+D
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPD 244
+YA+CG ++EA +F + K S W S+I G A +G KE+++LF M G+ P
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNS--VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
EIT++ +L AC+H G+VKE + +F + + + P+ EH+ CMVD++ARAGQV +AY+++
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+P+QP + LL C HG DLAE ++++LEP+ G YV LSN+YA +RW
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+ +R+ M R GVKK PG+S VE+ +H F+ DKSHP S+ IY L + +++
Sbjct: 444 DVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 500
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 124/236 (52%), Gaps = 8/236 (3%)
Query: 92 ISMARQVFDLMPEQ-DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-PKPNEVTMVSVL 149
+S A +VF + + +V W+ LI GY G+ A +++ EMRVSG +P+ T ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
A + + G +H VI + + ++ SL+ +YA CG + A VF M D
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK--MPEKD 186
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
+ WNS+I GFA +G +E+L L++EM+ G+KPD T ++LLSACA G +
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 246
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI----PIQPTASMLGALLNG 321
+ K G+T ++D+ AR G+V EA ++ + T+ ++G +NG
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 44/246 (17%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD T L A A + LG +H Y+ K G + SN L+ +Y+ + A
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+ +FD + KN VSW S++ G A ++G+ +
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLA--------------------------VNGFGK----- 305
Query: 125 EALAVFEEMR-VSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPLTLV 178
EA+ +F+ M G P E+T V +L AC+H G + +G RM Y I+ +
Sbjct: 306 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF-- 363
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+VD+ A+ G +++A +S M+P +V IW +++G HG L F+ + I
Sbjct: 364 --GCMVDLLARAGQVKKAYEYIKSMPMQP-NVVIWRTLLGACTVHG--DSDLAEFARIQI 418
Query: 239 VGVKPD 244
+ ++P+
Sbjct: 419 LQLEPN 424
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSACA 256
H S + KP +VFIWN++I G+A G + L+ EM + G V+PD TY L+ A
Sbjct: 73 HKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVT 132
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
V+ + ++G ++ + A G VA AY+ ++P + +
Sbjct: 133 TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW-N 191
Query: 317 ALLNGCMNHGKLDLA 331
+++NG +GK + A
Sbjct: 192 SVINGFAENGKPEEA 206
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 253/458 (55%), Gaps = 34/458 (7%)
Query: 1 MLRVG-VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY---- 55
M+R G VFPD +F F+ KA G +H K G ES FV +LI MY
Sbjct: 96 MMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCG 155
Query: 56 -------------------------SSFR--DIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
+ FR D+ AR++FD + V+N SWN ML GY K
Sbjct: 156 CVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIK 215
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G++ A+++F MP +D +SWS +I G G ++E+ F E++ +G PNEV++ V
Sbjct: 216 AGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGV 275
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L AC+ G+ + G+++H +V + + +L+DMY++CG + A VF G+ +
Sbjct: 276 LSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE-GMQEKR 334
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
+ W SMI G A HG +E++ LF+EM GV PD I++++LL AC+H GL++E +F
Sbjct: 335 CIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYF 394
Query: 269 DCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ + + P+ EHY CMVD+ R+G++ +AY F+CQ+PI PTA + LL C +HG
Sbjct: 395 SEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN 454
Query: 328 LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
++LAE V ++L EL+P+ G V LSN YA +W S+R++M +KK+ +S VE
Sbjct: 455 IELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVE 514
Query: 388 MHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDY 425
+ +++F A +K + + L I+ ++K Y
Sbjct: 515 VGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGY 552
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 117/294 (39%), Gaps = 63/294 (21%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
IHG K G ++D + + LI + A + D +P
Sbjct: 24 IHGLFIKYGVDTDSYFTGKLI--------LHCAISISDALP------------------- 56
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-PKPNEVTMVSVLC 150
AR++ PE D ++ L+ GY + ++AVF EM G P+ + V+
Sbjct: 57 --YARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR--------- 201
A + +L G MH + + L L + T+L+ MY CG ++ A VF
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 174
Query: 202 -----SGLMKPSDV---------------FIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+ + +DV WN M+ G+ G ++ + +FSEM
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEM----P 230
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
D++++ ++ AH G E++ +F L + GM+P ++ +++G
Sbjct: 231 HRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 296 bits (759), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 249/411 (60%), Gaps = 3/411 (0%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P LT+P + KA L + G +HG + K G E D F+ N+++HMY + + A
Sbjct: 122 VKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAW 181
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
++F G+ ++V+WNSM+ G+AKCG I A+ +FD MP+++ +SW+ +I G+VR G + +
Sbjct: 182 RIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKD 241
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL +F EM+ KP+ TMVS+L ACA+LGA ++GR +H Y++ N L ++ T+L+D
Sbjct: 242 ALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALID 301
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY KCG I+E L+VF K + WNSMI G A +G + ++DLFSE+ G++PD
Sbjct: 302 MYCKCGCIEEGLNVFECAPKK--QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDS 359
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT-PKSEHYACMVDVMARAGQVAEAYQFLC 304
++++ +L+ACAH G V A FF + + M P +HY MV+V+ AG + EA +
Sbjct: 360 VSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIK 419
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
+P++ + +LL+ C G +++A+ + L +L+P + YV LSN YA + +++
Sbjct: 420 NMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEE 479
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
A R M+ ++K G S +E+ +H F++ +HP S +IY +L +
Sbjct: 480 AVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 127/288 (44%), Gaps = 34/288 (11%)
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP--KPNEVT 144
A D++ A VF + ++ W+ +I G+ R + A+++F +M S P KP +T
Sbjct: 69 ASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLT 128
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---- 200
SV A LG GR +H VI L +R +++ MY CG + EA +F
Sbjct: 129 YPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI 188
Query: 201 ---------------RSGLMKPSDVFI----------WNSMIGGFACHGLVKESLDLFSE 235
+ GL+ + WNSMI GF +G K++LD+F E
Sbjct: 189 GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFRE 248
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
M VKPD T ++LL+ACA+ G ++ + + + +N S ++D+ + G
Sbjct: 249 MQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGC 308
Query: 296 VAEAYQ-FLCQIPIQPTA--SMLGALLNGCMNHGKLDLAETVGRKLIE 340
+ E F C Q + SM+ L N +DL + R +E
Sbjct: 309 IEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLE 356
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 296 bits (759), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 258/483 (53%), Gaps = 69/483 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYS---- 56
M R G+F D+ T+PFL KA + + +H +I K G SD +V N+LI YS
Sbjct: 108 MQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGG 167
Query: 57 -------------SFRD----------------IPNARKVFDGIPVKNLVSWNSMLDGYA 87
S RD + +AR++FD +P ++L+SWN+MLDGYA
Sbjct: 168 LGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYA 227
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV------------ 135
+C ++S A ++F+ MPE++ +SWS ++ GY + GD + A +F++M +
Sbjct: 228 RCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287
Query: 136 ---------------------SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
SG K + ++S+L AC G L G +H + + L
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+ +L+DMYAKCG +++A VF + D+ WN+M+ G HG KE+++LFS
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFND--IPKKDLVSWNTMLHGLGVHGHGKEAIELFS 405
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARA 293
M G++PD++T++ +L +C H GL+ E YF+ + P+ EHY C+VD++ R
Sbjct: 406 RMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRV 465
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
G++ EA + + +P++P + GALL C H ++D+A+ V L++L+P G Y LS
Sbjct: 466 GRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLS 525
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLG 413
N+YA W+ +R M+ MGV+K G S VE+ +H F DKSHP S+QIY MLG
Sbjct: 526 NIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLG 585
Query: 414 FIV 416
++
Sbjct: 586 SLI 588
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 110/229 (48%), Gaps = 12/229 (5%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++ + C ++A +VF+ + E +V + LI + + +A VF EM+ G +
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFAD 116
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG--AIQEALHV 199
T +L AC+ L +MMH+++ L + + +L+D Y++CG +++A+ +
Sbjct: 117 NFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL 176
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F M D WNSM+GG G ++++ LF EM + D I++ +L A
Sbjct: 177 FEK--MSERDTVSWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTMLDGYARCR 230
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI 308
+ +A+ F+ + + ++ MV ++AG + A ++P+
Sbjct: 231 EMSKAFELFEKMPERNTV----SWSTMVMGYSKAGDMEMARVMFDKMPL 275
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 291 bits (744), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 256/470 (54%), Gaps = 40/470 (8%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
V PDH TFP + KA +C +G IHG TK G S FV N L+ MY + A
Sbjct: 135 NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAK----------CGDI----------SMA--------- 95
R V D + +++VSWNS++ GYA+ C ++ +MA
Sbjct: 195 RLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Query: 96 --------RQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+ +F M ++ ++SW+ +I Y++ EA+ ++ M G +P+ V++ S
Sbjct: 255 TTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITS 314
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
VL AC AL G+ +H Y+ +L L+L +L+DMYAKCG +++A VF + MK
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN--MKS 372
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
DV W +MI + G +++ LFS++ G+ PD I ++ L+AC+H GL++E
Sbjct: 373 RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 432
Query: 268 FDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
F + + +TP+ EH ACMVD++ RAG+V EAY+F+ + ++P + GALL C H
Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHS 492
Query: 327 KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
D+ KL +L P Q G YV LSN+YA RW++ ++R M+ G+KK+PG S V
Sbjct: 493 DTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
Query: 387 EMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYFYDNE 436
E++ +H F+ D+SHP S++IY L +V +MK + + E +D E
Sbjct: 553 EVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVE 602
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 136/294 (46%), Gaps = 17/294 (5%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWNSM----LDGYAKCGDISMARQVFDLMPEQD 106
L + ++ DI R V I +++L +S+ + YA D++ AR+VFD +PE++
Sbjct: 45 LGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN 104
Query: 107 VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH 166
V+ + +I YV G Y E + VF M +P+ T VL AC+ G + GR +H
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 167 YVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
L TL + LV MY KCG + EA V M DV WNS++ G+A +
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE--MSRRDVVSWNSLVVGYAQNQRF 222
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC---LGKNGMTPKSEHY 283
++L++ EM V + D T +LL A ++ + Y D +GK + +
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSN-TTTENVMYVKDMFFKMGKKSLVS----W 277
Query: 284 ACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETV 334
M+ V + EA + ++ +P A + ++L C + L L + +
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 291 bits (744), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 257/474 (54%), Gaps = 40/474 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M V PDH TFP + KA +C +G IHG TK G S FV N L+ MY
Sbjct: 131 MCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGF 190
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAK----------CGDI----------SMA----- 95
+ AR V D + +++VSWNS++ GYA+ C ++ +MA
Sbjct: 191 LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 250
Query: 96 ------------RQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEV 143
+ +F M ++ ++SW+ +I Y++ EA+ ++ M G +P+ V
Sbjct: 251 VSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
++ SVL AC AL G+ +H Y+ +L L+L +L+DMYAKCG +++A VF +
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN- 369
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
MK DV W +MI + G +++ LFS++ G+ PD I ++ L+AC+H GL++E
Sbjct: 370 -MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEE 428
Query: 264 AWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC 322
F + + +TP+ EH ACMVD++ RAG+V EAY+F+ + ++P + GALL C
Sbjct: 429 GRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGAC 488
Query: 323 MNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPG 382
H D+ KL +L P Q G YV LSN+YA RW++ ++R M+ G+KK+PG
Sbjct: 489 RVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPG 548
Query: 383 YSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYFYDNE 436
S VE++ +H F+ D+SHP S++IY L +V +MK + + E +D E
Sbjct: 549 ASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVE 602
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 11/291 (3%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWNSM----LDGYAKCGDISMARQVFDLMPEQD 106
L + ++ DI R V I +++L +S+ + YA D++ AR+VFD +PE++
Sbjct: 45 LGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN 104
Query: 107 VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH 166
V+ + +I YV G Y E + VF M +P+ T VL AC+ G + GR +H
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 167 YVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
L TL + LV MY KCG + EA V M DV WNS++ G+A +
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE--MSRRDVVSWNSLVVGYAQNQRF 222
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
++L++ EM V + D T +LL A ++ + Y D K G + M
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSN-TTTENVMYVKDMFFKMGKKSLVS-WNVM 280
Query: 287 VDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETV 334
+ V + EA + ++ +P A + ++L C + L L + +
Sbjct: 281 IGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 289 bits (739), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 239/423 (56%), Gaps = 36/423 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHG-YITKAGYESDRFVSNSLIHMYSSFR 59
M + GV + +T + KA+ + G ++HG Y+ + D F+ +SL+ MY
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMY---- 250
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
KC A++VFD MP ++V++W+ LI GYV+
Sbjct: 251 ---------------------------GKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+D+ + VFEEM S PNE T+ SVL ACAH+GAL +GR +H Y+I N + +
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA 343
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
T+L+D+Y KCG ++EA+ VF + +V+ W +MI GFA HG +++ DLF M
Sbjct: 344 GTTLIDLYVKCGCLEEAILVFER--LHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS 401
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAE 298
V P+E+T++ +LSACAHGGLV+E F + G+ M PK++HYACMVD+ R G + E
Sbjct: 402 HVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEE 461
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + ++P++PT + GAL C+ H +L + ++I+L+P GRY L+N+Y+
Sbjct: 462 AKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSE 521
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHP-SSEQIYMMLGFIVS 417
+ WD+ +R+ M+ V KSPG+S++E+ G L F+A D P S+ +Y L +
Sbjct: 522 SQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGV 581
Query: 418 QMK 420
QM+
Sbjct: 582 QMR 584
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 149/327 (45%), Gaps = 36/327 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV P TFP L KA L+ H +I K G +SD FV NSLI
Sbjct: 95 MRRNGVIPSRHTFPPLLKA-VFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLI-------- 145
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
GY+ G A ++FD ++DV++W+ +IDG+VR
Sbjct: 146 -----------------------SGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH-YVIDNELPLTLVL 179
G EA+ F EM+ +G NE+T+VSVL A + + GR +H Y+ + + +
Sbjct: 183 GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+SLVDMY KC +A VF M +V W ++I G+ + + +F EM
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDE--MPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS 300
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
V P+E T ++LSACAH G + + KN + + ++D+ + G + EA
Sbjct: 301 DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 360
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHG 326
++ + A++NG HG
Sbjct: 361 ILVFERLH-EKNVYTWTAMINGFAAHG 386
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 287 bits (735), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 252/453 (55%), Gaps = 38/453 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS--- 57
MLR+GV PD LTFPF+ K+++ L R LG A+H K + D FV SL+ MY+
Sbjct: 117 MLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQ 176
Query: 58 -------FRDIPN-------------------------ARKVFDGIPVKNLVSWNSMLDG 85
F + P+ A +F +P +N SW++++ G
Sbjct: 177 LKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKG 236
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y G+++ A+Q+F+LMPE++V+SW+ LI+G+ + GDY+ A++ + EM G KPNE T+
Sbjct: 237 YVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTI 296
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+VL AC+ GAL G +H Y++DN + L + T+LVDMYAKCG + A VF + M
Sbjct: 297 AAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSN--M 354
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
D+ W +MI G+A HG +++ F +M G KPDE+ +L +L+AC + V
Sbjct: 355 NHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGL 414
Query: 266 YFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
FFD + + + P +HY +VD++ RAG++ EA++ + +PI P + AL C
Sbjct: 415 NFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKA 474
Query: 325 HGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
H AE+V + L+EL+P G Y+ L +A R ++++ ++S G+S
Sbjct: 475 HKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWS 534
Query: 385 FVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
++E+ G L++F A D SH +++I + L I+S
Sbjct: 535 YIELDGQLNKFSAGDYSHKLTQEIGLKLDEIIS 567
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 19/269 (7%)
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R V LVS +S+L K D S++ +F E++ + LI G ++
Sbjct: 55 RGVLSSRVAAQLVSCSSLL----KSPDYSLS--IFRNSEERNPFVLNALIRGLTENARFE 108
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
++ F M G KP+ +T VL + + LG GR +H + N + +R SLV
Sbjct: 109 SSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLV 168
Query: 185 DMYAKCGAIQEALHVFRSG--LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
DMYAK G ++ A VF +K + IWN +I G+ + + LF M +
Sbjct: 169 DMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSM----PE 224
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA--- 299
+ ++ L+ G + A F+ + + + + +++ ++ G A
Sbjct: 225 RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVS----WTTLINGFSQTGDYETAIST 280
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKL 328
Y + + ++P + A+L+ C G L
Sbjct: 281 YFEMLEKGLKPNEYTIAAVLSACSKSGAL 309
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/438 (34%), Positives = 246/438 (56%), Gaps = 7/438 (1%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
+G PD +T + + +G IHGY+ K G D+ V +++I MY +
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVR 119
+F+ + N+ + G ++ G + A ++F+L EQ +V+SW+ +I G +
Sbjct: 306 IISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G EAL +F EM+V+G KPN VT+ S+L AC ++ AL GR H + + L + +
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHV 425
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++L+DMYAKCG I + VF +M ++ WNS++ GF+ HG KE + +F +
Sbjct: 426 GSALIDMYAKCGRINLSQIVFN--MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
+KPD I++ +LLSAC GL E W +F + + G+ P+ EHY+CMV+++ RAG++ E
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
AY + ++P +P + + GALLN C +DLAE KL LEP G YV LSN+YA
Sbjct: 544 AYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAA 603
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
W + S+R ME +G+KK+PG S++++ ++ +A DKSHP +QI + I +
Sbjct: 604 KGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKE 663
Query: 419 MKHIVDYENQEYYFYDNE 436
M+ N ++ +D E
Sbjct: 664 MRKSGHRPNLDFALHDVE 681
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 178/368 (48%), Gaps = 46/368 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ PD P L K A L ++G IH +G + D FV S+ HMY
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR 166
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDG 116
+ +ARKVFD + K++V+ +++L YA+ G + ++ M E +++SW+ ++ G
Sbjct: 167 MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ R G + EA+ +F+++ G P++VT+ SVL + L+ GR++H YVI L
Sbjct: 227 FNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKD 286
Query: 177 LVLRTSLVDMYAKCGAIQEALHVF-------------------RSGLMKPS--------- 208
+ ++++DMY K G + + +F R+GL+ +
Sbjct: 287 KCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKE 346
Query: 209 -----DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
+V W S+I G A +G E+L+LF EM + GVKP+ +T ++L AC + +
Sbjct: 347 QTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGH 406
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI--PIQPTASML--GALL 319
+ + + ++D+ A+ G++ L QI + PT +++ +L+
Sbjct: 407 GRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRIN-----LSQIVFNMMPTKNLVCWNSLM 461
Query: 320 NGCMNHGK 327
NG HGK
Sbjct: 462 NGFSMHGK 469
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 33 HGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDI 92
H I K+G ++D ++S LI YS++ +A V I
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSI--------------------- 76
Query: 93 SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCAC 152
P+ + S+S LI + + +++ VF M G P+ + ++ C
Sbjct: 77 ----------PDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC 126
Query: 153 AHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFI 212
A L A G+ +H + L + ++ S+ MY +CG + +A VF M DV
Sbjct: 127 AELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDR--MSDKDVVT 184
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
++++ +A G ++E + + SEM G++ + +++ +LS G KEA F +
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 273 KNGMTP 278
G P
Sbjct: 245 HLGFCP 250
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 218/364 (59%), Gaps = 3/364 (0%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
KN ++++ YAKCG + AR VFD M E+D+++WS +I GY E + +F +M
Sbjct: 245 KNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM 304
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
KP++ ++V L +CA LGALD G + +E L + +L+DMYAKCGA+
Sbjct: 305 LQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAM 364
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
VF+ MK D+ I N+ I G A +G VK S +F + +G+ PD T+L LL
Sbjct: 365 ARGFEVFKE--MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLC 422
Query: 254 ACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
C H GL+++ FF+ + + EHY CMVD+ RAG + +AY+ +C +P++P A
Sbjct: 423 GCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNA 482
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAM 372
+ GALL+GC LAETV ++LI LEP G YV LSN+Y++ RWD+A +R+ M
Sbjct: 483 IVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM 542
Query: 373 ERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYF 432
+ G+KK PGYS++E+ G +H F+A DKSHP S++IY L + ++M+ + E+ F
Sbjct: 543 NKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVF 602
Query: 433 YDNE 436
+D E
Sbjct: 603 FDVE 606
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 172/349 (49%), Gaps = 35/349 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G++ TFP + KA R+LG+ +H + K G+ D SL+ +YS
Sbjct: 106 GLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG------- 158
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
G ++ A ++FD +P++ V++W+ L GY G +
Sbjct: 159 ------------------------SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EA+ +F++M G KP+ +V VL AC H+G LD G + Y+ + E+ +RT+LV
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
++YAKCG +++A VF S M D+ W++MI G+A + KE ++LF +M +KPD
Sbjct: 255 NLYAKCGKMEKARSVFDS--MVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+ + + LS+CA G + + + ++ ++D+ A+ G +A ++
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGL 352
++ + ++ A ++G +G + L+ V + +L DG ++GL
Sbjct: 373 EMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 420
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
++ ++ LI+G+V + E L +F +R G + T VL AC + G +H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL 225
V+ + TSL+ +Y+ G + +A +F + V W ++ G+ G
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE--IPDRSVVTWTALFSGYTTSGR 192
Query: 226 VKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC 285
+E++DLF +M +GVKPD + +LSAC H G + + + + M S
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 286 MVDVMARAGQVAEA 299
+V++ A+ G++ +A
Sbjct: 253 LVNLYAKCGKMEKA 266
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 115/278 (41%), Gaps = 36/278 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ + PD + + A L +LG I + + ++ F++N+LI M
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDM------ 357
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
YAKCG ++ +VF M E+D++ + I G +
Sbjct: 358 -------------------------YAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKN 392
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVL 179
G + AVF + G P+ T + +LC C H G + G R + L T+
Sbjct: 393 GHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEH 452
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+VD++ + G + +A + M+P+ + +W +++ G C + L ++
Sbjct: 453 YGCMVDLWGRAGMLDDAYRLICDMPMRPNAI-VWGALLSG--CRLVKDTQLAETVLKELI 509
Query: 240 GVKP-DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
++P + Y+ L + + GG EA D + K GM
Sbjct: 510 ALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGM 547
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 43/264 (16%)
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
T++SV C HL + + HH D L + L+L+ +L K ++ S
Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLHHDTFL-VNLLLKRTLFFRQTKYS------YLLFSH 70
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
P ++F++NS+I GF + L E+LDLF + G+ T+ +L AC K
Sbjct: 71 TQFP-NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKL 129
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---------------- 307
+ K G ++ + + +G++ +A++ +IP
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 308 ------------------IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRY 349
++P + + +L+ C++ G LD E + + + E+E ++
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 350 -VGLSNVYAIFRRWDKARSMREAM 372
L N+YA + +KARS+ ++M
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSM 273
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 285 bits (729), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/416 (39%), Positives = 233/416 (56%), Gaps = 38/416 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ V PD T + A A ELG +H +I G+ S
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS----------------- 299
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
NL N+++D Y+KCG++ A +F+ +P +DV+SW+ LI GY
Sbjct: 300 --------------NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL--- 177
Y EAL +F+EM SG PN+VTM+S+L ACAHLGA+D GR +H Y ID L
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY-IDKRLKGVTNAS 404
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
LRTSL+DMYAKCG I+ A VF S L K + WN+MI GFA HG S DLFS M
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHK--SLSSWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQV 296
+G++PD+IT++ LLSAC+H G++ + F + ++ MTPK EHY CM+D++ +G
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 522
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY 356
EA + + + ++P + +LL C HG ++L E+ LI++EP G YV LSN+Y
Sbjct: 523 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 582
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
A RW++ R + G+KK PG S +E+ +H F+ DK HP + +IY ML
Sbjct: 583 ASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 217/390 (55%), Gaps = 18/390 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ +G+ P+ TFPF+ K+ A + G IHG++ K G + D +V SLI MY
Sbjct: 125 MISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR 184
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A KVFD P +++VS+ +++ GYA G I A+++FD +P +DV+SW+ +I GY
Sbjct: 185 LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET 244
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+Y EAL +F++M + +P+E TMV+V+ ACA G+++ GR +H ++ D+ L +
Sbjct: 245 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV 304
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+D+Y+KCG ++ A +F + DV WN++IGG+ L KE+L LF EM G
Sbjct: 305 NALIDLYSKCGELETACGLFER--LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK--NGMTPKSEHYACMVDVMARAGQVAE 298
P+++T L++L ACAH G + + + K G+T S ++D+ A+ G +
Sbjct: 363 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 422
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL--IELEPHQDGRYVGLSNVY 356
A+Q I + + S A++ G HG+ D + + ++ I ++P D +VGL +
Sbjct: 423 AHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP-DDITFVGLLSAC 480
Query: 357 A----------IFRRWDKARSMREAMERMG 376
+ IFR + M +E G
Sbjct: 481 SHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 130/314 (41%), Gaps = 63/314 (20%)
Query: 32 IHGYITKAGYESDRFVSNSLIH---MYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
IH + K G + + + LI + F +P A VF I NL+ WN+M G+A
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
D A +++ C+I G PN T V
Sbjct: 112 SSDPVSALKLY-----------VCMIS--------------------LGLLPNSYTFPFV 140
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR------- 201
L +CA A +G+ +H +V+ L L + TSL+ MY + G +++A VF
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 202 ---SGLMKP-------------------SDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+ L+K DV WN+MI G+A G KE+L+LF +M
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
V+PDE T + ++SACA G ++ + +G + ++D+ ++ G++ A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 300 YQFLCQIPIQPTAS 313
++P + S
Sbjct: 321 CGLFERLPYKDVIS 334
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 284 bits (727), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 233/395 (58%), Gaps = 35/395 (8%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
LG IH + ++G+ S +V NSL+H+Y A
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLY-------------------------------A 34
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
CGD++ A +VFD MPE+D+++W+ +I+G+ G +EALA++ EM G KP+ T+VS
Sbjct: 35 NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVS 94
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L ACA +GAL G+ +H Y+I L L L+D+YA+CG ++EA +F + K
Sbjct: 95 LLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN 154
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNLLSACAHGGLVKEAWY 266
S W S+I G A +G KE+++LF M G+ P EIT++ +L AC+H G+VKE +
Sbjct: 155 S--VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
Query: 267 FFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
+F + + + P+ EH+ CMVD++ARAGQV +AY+++ +P+QP + LL C H
Sbjct: 213 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Query: 326 GKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSF 385
G DLAE ++++LEP+ G YV LSN+YA +RW + +R+ M R GVKK PG+S
Sbjct: 273 GDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSL 332
Query: 386 VEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
VE+ +H F+ DKSHP S+ IY L + +++
Sbjct: 333 VEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 367
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 44/246 (17%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD T L A A + LG +H Y+ K G + SN L+ +Y+ + A
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+ +FD + KN VSW S++ G A ++G+ +
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLA--------------------------VNGFGK----- 172
Query: 125 EALAVFEEMR-VSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPLTLV 178
EA+ +F+ M G P E+T V +L AC+H G + +G RM Y I+ +
Sbjct: 173 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF-- 230
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+VD+ A+ G +++A +S M+P +V IW +++G HG L F+ + I
Sbjct: 231 --GCMVDLLARAGQVKKAYEYIKSMPMQP-NVVIWRTLLGACTVHG--DSDLAEFARIQI 285
Query: 239 VGVKPD 244
+ ++P+
Sbjct: 286 LQLEPN 291
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 284 bits (727), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 155/501 (30%), Positives = 268/501 (53%), Gaps = 74/501 (14%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD TFP L KA + L ++G +H + + G+++D FV N LI +Y+ R + +AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 66 KVFDGIPV--KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL-----------SWSC 112
VF+G+P+ + +VSW +++ YA+ G+ A ++F M + DV +++C
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 113 LID----------------------------GYVRKGDYDEALAVFEEMR---------- 134
L D Y + G A +F++M+
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294
Query: 135 VSG---------------------PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
+SG +P+ +++ S + ACA +G+L++ R M+ YV ++
Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY 354
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+ + ++L+DM+AKCG+++ A VF L + DV +W++MI G+ HG +E++ L+
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDR--DVVVWSAMIVGYGLHGRAREAISLY 412
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
M GV P+++T+L LL AC H G+V+E W+FF+ + + + P+ +HYAC++D++ RA
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRA 472
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
G + +AY+ + +P+QP ++ GALL+ C H ++L E ++L ++P G YV LS
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLS 532
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLG 413
N+YA R WD+ +R M+ G+ K G S+VE+ G L F DKSHP E+I +
Sbjct: 533 NLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVE 592
Query: 414 FIVSQMKHIVDYENQEYYFYD 434
+I S++K N++ +D
Sbjct: 593 WIESRLKEGGFVANKDASLHD 613
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 126/259 (48%), Gaps = 7/259 (2%)
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F G + L+ +S GDI+ ARQVFD +P + W+ +I GY R + +AL
Sbjct: 51 FSGFLITKLIHASSSF------GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDAL 104
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
++ M+++ P+ T +L AC+ L L GR +H V + ++ L+ +Y
Sbjct: 105 LMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALY 164
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AKC + A VF + + W +++ +A +G E+L++FS+M + VKPD +
Sbjct: 165 AKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVA 224
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+++L+A +K+ + K G+ + + + + A+ GQVA A + L
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA-KILFDKM 283
Query: 308 IQPTASMLGALLNGCMNHG 326
P + A+++G +G
Sbjct: 284 KSPNLILWNAMISGYAKNG 302
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 284 bits (726), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 254/434 (58%), Gaps = 11/434 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M+ GV PD ++ L+ S+C R + G + HGY+ + G+ES + N+LI MY
Sbjct: 328 MMDSGVRPDRISM--LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
A ++FD + K +V+WNS++ GY + G++ A + F+ MPE++++SW+ +I G V
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 119 RKGDYDEALAVFEEMRVS-GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
+ ++EA+ VF M+ G + VTM+S+ AC HLGALD + +++Y+ N + L +
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 505
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
L T+LVDM+++CG + A+ +F S + DV W + IG A G + +++LF +M
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI 563
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEA-WYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
G+KPD + ++ L+AC+HGGLV++ F+ L +G++P+ HY CMVD++ RAG +
Sbjct: 564 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY 356
EA Q + +P++P + +LL C G +++A K+ L P + G YV LSNVY
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVY 683
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI- 415
A RW+ +R +M+ G++K PG S +++ G H F + D+SHP I ML +
Sbjct: 684 ASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Query: 416 --VSQMKHIVDYEN 427
S + H+ D N
Sbjct: 744 QRASHLGHVPDLSN 757
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 164/334 (49%), Gaps = 39/334 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ PD TFPF A A + G+ IHG I K GY D FV NSL+H Y+ +
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +ARKVFD + +N+VSW SM+ GYA+ A+ DL
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYAR---RDFAKDAVDLF------------------ 223
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
F +R PN VTMV V+ ACA L L+ G ++ ++ ++ + + ++
Sbjct: 224 ---------FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++LVDMY KC AI A +F S++ + N+M + GL +E+L +F+ M G
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDE--YGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLG---KNGMTPKSEHYACMVDVMARAGQVA 297
V+PD I+ L+ +S+C+ ++ + C G +NG ++D+ + +
Sbjct: 333 VRPDRISMLSAISSCSQ---LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
A++ ++ T +++ G + +G++D A
Sbjct: 390 TAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAA 422
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Query: 92 ISMARQVFDLMPEQDV-LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
+S A++VF+ ++ LI GY G +EA+ +F M SG P++ T L
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
ACA A G +H ++ L ++ SLV YA+CG + A VF M +V
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE--MSERNV 200
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACA 256
W SMI G+A K+++DLF M V P+ +T + ++SACA
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACA 247
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/426 (37%), Positives = 237/426 (55%), Gaps = 40/426 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLA--IHGYITKAGYESDRFVSNSLIHMYSSF 58
M+R P+ TF + ++C+ LGL IHG I K Y+S FV +SL
Sbjct: 144 MMRSDGKPNEFTFATVL--TSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSL------- 194
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
LD YAK G I AR++F+ +PE+DV+S + +I GY
Sbjct: 195 ------------------------LDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYA 230
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ G +EAL +F + G PN VT S+L A + L LD G+ H +V+ ELP V
Sbjct: 231 QLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV 290
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L+ SL+DMY+KCG + A +F + M WN+M+ G++ HGL +E L+LF M
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDN--MPERTAISWNAMLVGYSKHGLGREVLELFRLMRD 348
Query: 239 VG-VKPDEITYLNLLSACAHGGLVKEAWYFFDCL--GKNGMTPKSEHYACMVDVMARAGQ 295
VKPD +T L +LS C+HG + FD + G+ G P +EHY C+VD++ RAG+
Sbjct: 349 EKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGR 408
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
+ EA++F+ ++P +PTA +LG+LL C H +D+ E+VGR+LIE+EP G YV LSN+
Sbjct: 409 IDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNL 468
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
YA RW ++R M + V K PG S+++ LH F A+D++HP E++ + I
Sbjct: 469 YASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEI 528
Query: 416 VSQMKH 421
+MK
Sbjct: 529 SIKMKQ 534
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 138/267 (51%), Gaps = 32/267 (11%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y KC + AR+V D MPE++V+SW+ +I Y + G EAL VF EM S KPNE T
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+VL +C L G+ +H ++ + + +SL+DMYAK G I+EA +F +
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFEC--L 214
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC---------- 255
DV ++I G+A GL +E+L++F +H G+ P+ +TY +LL+A
Sbjct: 215 PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 256 -AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
AH +++ F+ L + ++D+ ++ G ++ A + +P + TA
Sbjct: 275 QAHCHVLRRELPFYAVLQNS-----------LIDMYSKCGNLSYARRLFDNMP-ERTAIS 322
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIEL 341
A+L G HG +GR+++EL
Sbjct: 323 WNAMLVGYSKHG-------LGREVLEL 342
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 99 FDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL 158
F P VL I G EAL EM + GP+ ++L AC AL
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 159 DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIG 218
G+ +H ++I LRT L+ Y KC +++A V M +V W +MI
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE--MPEKNVVSWTAMIS 126
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC-----------AHGGLVKEAWYF 267
++ G E+L +F+EM KP+E T+ +L++C HG +VK +
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS 186
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
+G + ++D+ A+AGQ+ EA + +P + S
Sbjct: 187 HIFVGSS-----------LLDMYAKAGQIKEAREIFECLPERDVVS 221
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 281 bits (719), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 247/452 (54%), Gaps = 37/452 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR V P T+ L KAS+ G ++ +I K G+ + +LI YS+
Sbjct: 117 MLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGR 174
Query: 61 IPNARKVFDGIPVKNLVSWNSM-------------------------------LDGYAKC 89
I ARKVFD +P ++ ++W +M ++GY
Sbjct: 175 IREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGL 234
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
G++ A +F+ MP +D++SW+ +I GY + Y EA+AVF +M G P+EVTM +V+
Sbjct: 235 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 294
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
ACAHLG L+ G+ +H Y + N L + + ++LVDMY+KCG+++ AL VF + + +
Sbjct: 295 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFN--LPKKN 352
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
+F WNS+I G A HG +E+L +F++M + VKP+ +T++++ +AC H GLV E +
Sbjct: 353 LFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYR 412
Query: 270 CLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKL 328
+ + + EHY MV + ++AG + EA + + + +P A + GALL+GC H L
Sbjct: 413 SMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNL 472
Query: 329 DLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKK-SPGYSFVE 387
+AE KL+ LEP G Y L ++YA RW +R M +G++K PG S +
Sbjct: 473 VIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIR 532
Query: 388 MHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+ H F A DKSH +S+++ ++L I QM
Sbjct: 533 IDKRDHLFAAADKSHSASDEVCLLLDEIYDQM 564
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 281 bits (718), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 220/380 (57%), Gaps = 3/380 (0%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E + N+++ Y + A+++FD +P +N+ +WN+M+ GYA+CG IS A+ +FD
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDK 368
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MP++D +SW+ +I GY + G EAL +F +M G + N + S L CA + AL+ G
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ +H ++ + +L+ MY KCG+I+EA +F+ M D+ WN+MI G++
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE--MAGKDIVSWNTMIAGYS 486
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV-KEAWYFFDCLGKNGMTPKS 280
HG + +L F M G+KPD+ T + +LSAC+H GLV K YF+ G+ P S
Sbjct: 487 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 546
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+HYACMVD++ RAG + +A+ + +P +P A++ G LL HG +LAET K+
Sbjct: 547 QHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFA 606
Query: 341 LEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDK 400
+EP G YV LSN+YA RW +R M GVKK PGYS++E+ H F D+
Sbjct: 607 MEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDE 666
Query: 401 SHPSSEQIYMMLGFIVSQMK 420
HP ++I+ L + +MK
Sbjct: 667 FHPEKDEIFAFLEELDLRMK 686
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 146/296 (49%), Gaps = 21/296 (7%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N +I Y + ARK+FD +P ++LVSWN M+ GY + ++ AR++F++MPE+DV
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW+ ++ GY + G D+A +VF+ M P+ N+V+ ++L A +++ M+
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACML---- 210
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ LV L+ + K I EA F S M DV WN++I G+A G + E
Sbjct: 211 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS--MNVRDVVSWNTIITGYAQSGKIDE 268
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE-HYACMV 287
+ LF E + D T+ ++S +V+EA FD M ++E + M+
Sbjct: 269 ARQLFDESPV----QDVFTWTAMVSGYIQNRMVEEARELFD-----KMPERNEVSWNAML 319
Query: 288 DVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP 343
+ ++ A + +P + S ++ G GK+ A+ + K+ + +P
Sbjct: 320 AGYVQGERMEMAKELFDVMPCR-NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 144/286 (50%), Gaps = 21/286 (7%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D N +I Y R++ AR++F+ +P +++ SWN+ML GYA+ G + AR VFD
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE++ +SW+ L+ YV+ +EA +F+ +VS C G + K
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSR-------ENWALVSWNCLLG--GFVKKK 233
Query: 162 RMMH-HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
+++ D+ +V +++ YA+ G I EA +F ++ DVF W +M+ G+
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ--DVFTWTAMVSGY 291
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
+ +V+E+ +LF +M + +E+++ +L+ G ++ A FD + ++
Sbjct: 292 IQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST-- 345
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ M+ A+ G+++EA ++P + S A++ G G
Sbjct: 346 --WNTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMIAGYSQSG 388
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 23/295 (7%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
+SD N I Y A +VF +P + VS+N M+ GY + G+ +AR++FD
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE+D++SW+ +I GYVR + +A +FE M P+ + + ++L A G +D
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVDDA 176
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
R V D V +L+ Y + ++EA +F+S + + WN ++GGF
Sbjct: 177 R----SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS--RENWALVSWNCLLGGFV 230
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE 281
+ E+ F M++ D +++ +++ A G + EA FD +P +
Sbjct: 231 KKKKIVEARQFFDSMNV----RDVVSWNTIITGYAQSGKIDEARQLFD------ESPVQD 280
Query: 282 --HYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
+ MV + V EA + ++P + S A+L G + ++++A+ +
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS-WNAMLAGYVQGERMEMAKEL 334
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G + +F A ++ ELG +HG + K GYE+ FV N+L+ MY
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A +F + K++VSWN+M+ GY+ R
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYS-------------------------------RH 488
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + AL FE M+ G KP++ TMV+VL AC+H G +DKGR + Y + + + +
Sbjct: 489 GFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR-QYFYTMTQDYGVMPNSQ 547
Query: 181 --TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
+VD+ + G +++A ++ ++ +P D IW +++G HG
Sbjct: 548 HYACMVDLLGRAGLLEDAHNLMKNMPFEP-DAAIWGTLLGASRVHG 592
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 280 bits (717), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 232/417 (55%), Gaps = 3/417 (0%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
V PD + + A AI+ ++ + D + +L+ MY+ + A
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA 266
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R+ F + V+NL +M+ GY+KCG + A+ +FD ++D++ W+ +I YV
Sbjct: 267 REFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQ 326
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL VFEEM SG KP+ V+M SV+ ACA+LG LDK + +H + N L L + +L+
Sbjct: 327 EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALI 386
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+MYAKCG + VF M +V W+SMI + HG ++L LF+ M V+P+
Sbjct: 387 NMYAKCGGLDATRDVFEK--MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
E+T++ +L C+H GLV+E F + +TPK EHY CMVD+ RA + EA + +
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+P+ + G+L++ C HG+L+L + ++++ELEP DG V +SN+YA +RW+
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWE 564
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
R++R ME V K G S ++ +G H F+ DK H S +IY L +VS++K
Sbjct: 565 DVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLK 621
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 168/373 (45%), Gaps = 63/373 (16%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
VG D +F + KA + + G+ +HG K D FV + MY+S I
Sbjct: 105 VGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINY 164
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
AR VFD + +++V+WN+M++ Y + G +
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLV------------------------------- 193
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
DEA +FEEM+ S P+E+ + +++ AC G + R ++ ++I+N++ + L T+L
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 184 VDMYAKCGAIQEALHVFR--------------SGLMK---------------PSDVFIWN 214
V MYA G + A FR SG K D+ W
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWT 313
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
+MI + +E+L +F EM G+KPD ++ +++SACA+ G++ +A + C+ N
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN 373
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
G+ + ++++ A+ G + ++P + S +++N HG+ A ++
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSW-SSMINALSMHGEASDALSL 432
Query: 335 GRKLIE--LEPHQ 345
++ + +EP++
Sbjct: 433 FARMKQENVEPNE 445
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 227/413 (54%), Gaps = 35/413 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML VFPD +F F+ KA A E G IHG K+G +D FV N+L+++Y
Sbjct: 131 MLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGY 190
Query: 61 IPNARKVFDGIPVKNLVSWNS-------------------------------MLDGYAKC 89
ARKV D +PV++ VSWNS M+ GYA
Sbjct: 191 FEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAA 250
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSV 148
G + A++VFD MP +DV+SW+ ++ Y G Y+E L VF +M S KP+ T+VSV
Sbjct: 251 GLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSV 310
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L ACA LG+L +G +H Y+ + + + L T+LVDMY+KCG I +AL VFR+
Sbjct: 311 LSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRA--TSKR 368
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
DV WNS+I + HGL K++L++FSEM G KP+ IT++ +LSAC H G++ +A F
Sbjct: 369 DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLF 428
Query: 269 DCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ + + P EHY CMVD++ R G++ EA + + +IP + +L +LL C G+
Sbjct: 429 EMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQ 488
Query: 328 LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKS 380
L+ AE + +L+EL Y +SN+YA RW+K R M V +S
Sbjct: 489 LEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 20/250 (8%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+S A + + + + + + +I Y + AL VF EM + P++ + VL A
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
CA ++GR +H I + L + + +LV++Y + G + A V M D
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDR--MPVRDAV 207
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
WNS++ + GLV E+ LF EM V+ ++ ++S A GLVKEA FD +
Sbjct: 208 SWNSLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSM 263
Query: 272 ------GKNGMTPKSEHYACMVDVMARAGQVAEAY-QFLCQIPIQPTASMLGALLNGCMN 324
N M H C +V+ E + + L +P L ++L+ C +
Sbjct: 264 PVRDVVSWNAMVTAYAHVGCYNEVL-------EVFNKMLDDSTEKPDGFTLVSVLSACAS 316
Query: 325 HGKLDLAETV 334
G L E V
Sbjct: 317 LGSLSQGEWV 326
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 278 bits (711), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 250/454 (55%), Gaps = 45/454 (9%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +T L A+A +LG + Y + +ESD ++++++ MY+ I +A+KVF
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 69 DGIPVKNLVSWNSMLDGYAKCG-----------------------------------DIS 93
D K+L+ WN++L YA+ G +
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVD 493
Query: 94 MARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
A+ +F M +++SW+ +++G V+ G +EA+ +M+ SG +PN ++ L
Sbjct: 494 EAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 553
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLV-LRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
ACAHL +L GR +H Y+I N +LV + TSLVDMYAKCG I +A VF S L S
Sbjct: 554 SACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLY--S 611
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
++ + N+MI +A +G +KE++ L+ + VG+KPD IT N+LSAC H G + +A F
Sbjct: 612 ELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIF 671
Query: 269 -DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
D + K M P EHY MVD++A AG+ +A + + ++P +P A M+ +L+ C K
Sbjct: 672 TDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRK 731
Query: 328 LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
+L + + RKL+E EP G YV +SN YA+ WD+ MRE M+ G+KK PG S+++
Sbjct: 732 TELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQ 791
Query: 388 MHG--ALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+ G +H FVA+DK+H +I MML ++ M
Sbjct: 792 ITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 168/318 (52%), Gaps = 11/318 (3%)
Query: 25 KRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK-----VFDGIPVKNLVSW 79
K E + + + K G E R ++ + ++ + ++ + +G+ + N++
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG- 312
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
S+L+ Y K G I A VFD M E+DV++W+ +I GYV++G ++A+ + + MR+ K
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLK 372
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+ VT+ +++ A A L G+ + Y I + +VL ++++DMYAKCG+I +A V
Sbjct: 373 YDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKV 432
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F S + K D+ +WN+++ +A GL E+L LF M + GV P+ IT+ ++ + G
Sbjct: 433 FDSTVEK--DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLG 316
V EA F + +G+ P + M++ M + G EA FL ++ ++P A +
Sbjct: 491 QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550
Query: 317 ALLNGCMNHGKLDLAETV 334
L+ C + L + T+
Sbjct: 551 VALSACAHLASLHIGRTI 568
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 131/257 (50%), Gaps = 33/257 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML +FPD+ P + KA L G +HGY+ K+G E FV++SL M
Sbjct: 164 MLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADM------ 217
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
Y KCG + A +VFD +P+++ ++W+ L+ GYV+
Sbjct: 218 -------------------------YGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EA+ +F +MR G +P VT+ + L A A++G +++G+ H I N + L +L
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSL++ Y K G I+ A VF M DV WN +I G+ GLV++++ + M +
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDR--MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 241 VKPDEITYLNLLSACAH 257
+K D +T L+SA A
Sbjct: 371 LKYDCVTLATLMSAAAR 387
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
YAKC + +A +F + ++V SW+ +I R G + AL F EM + P+ +
Sbjct: 117 YAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+V AC L GR +H YV+ + L + + +SL DMY KCG + +A VF +
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDE--I 234
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
+ WN+++ G+ +G +E++ LFS+M GV+P +T LSA A+ G V+E
Sbjct: 235 PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEE 292
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 17/222 (7%)
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE- 172
+ + G+ EAL++ EM + +L C + L G+ +H ++ N
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 173 -LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
+ T LV YAKC A++ A +F ++ +VF W ++IG GL + +L
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSK--LRVRNVFSWAAIIGVKCRIGLCEGALM 159
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC------ 285
F EM + PD N+ AC G +K W F G +G KS C
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKAC---GALK--WSRFG-RGVHGYVVKSGLEDCVFVASS 213
Query: 286 MVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ D+ + G + +A + +IP A AL+ G + +GK
Sbjct: 214 LADMYGKCGVLDDASKVFDEIP-DRNAVAWNALMVGYVQNGK 254
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 278 bits (710), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 147/409 (35%), Positives = 241/409 (58%), Gaps = 13/409 (3%)
Query: 22 CLLKRELGLAI--HGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSW 79
C +LG A HG K G + V N+L+ MY + +++F+ + K++VSW
Sbjct: 121 CAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSW 180
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS-GP 138
+LD K + R+VF MPE++ ++W+ ++ GY+ G E L + EM G
Sbjct: 181 TVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH 240
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL-------TLVLRTSLVDMYAKCG 191
N VT+ S+L ACA G L GR +H Y + E+ + +++ T+LVDMYAKCG
Sbjct: 241 GLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCG 300
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
I +++VFR LM+ +V WN++ G A HG + +D+F +M I VKPD++T+ +
Sbjct: 301 NIDSSMNVFR--LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAV 357
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
LSAC+H G+V E W F L G+ PK +HYACMVD++ RAG + EA + ++P+ P
Sbjct: 358 LSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPN 417
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREA 371
+LG+LL C HGK+++AE + R+LI++ P + +SN+Y R D A +R +
Sbjct: 418 EVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGS 477
Query: 372 MERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+ + G++K PG S + ++ ++HRF + D+SHP +++IY+ L ++ +++
Sbjct: 478 LRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIR 526
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 132/304 (43%), Gaps = 47/304 (15%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMP--EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
N++ YA G++ A+++FD +P E+D + W+ L+ + R G ++ +F EMR
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
+ ++V++V + CA L L + H + + ++ + +L+DMY KCG + E
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 198 HVFR--------------------SGLMKPSDVF---------IWNSMIGGFACHGLVKE 228
+F GL + +VF W M+ G+ G +E
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 229 SLDLFSEMHI-VGVKPDEITYLNLLSACAH-GGLVKEAWYFFDCLGKNGMTPKSEHY--- 283
L+L +EM G + +T ++LSACA G LV W L K M + Y
Sbjct: 227 VLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDV 286
Query: 284 ---ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+VD+ A+ G + + ++ + AL +G HGK GR +I+
Sbjct: 287 MVGTALVDMYAKCGNIDSSMNVF-RLMRKRNVVTWNALFSGLAMHGK-------GRMVID 338
Query: 341 LEPH 344
+ P
Sbjct: 339 MFPQ 342
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 277 bits (709), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 238/394 (60%), Gaps = 16/394 (4%)
Query: 36 ITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL-----VSWNSMLDGYAKCG 90
+ + G D + ++++ + +R + ++V + I +L VS N+++D YAKCG
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS-NALMDMYAKCG 446
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF----EEMRVSGPKPNEVTMV 146
+ A VF M +D++SW+ +I GY + +EAL++F EE R S P+E T+
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS---PDERTVA 503
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
VL ACA L A DKGR +H Y++ N + SLVDMYAKCGA+ A +F +
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD--IA 561
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
D+ W MI G+ HG KE++ LF++M G++ DEI++++LL AC+H GLV E W
Sbjct: 562 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWR 621
Query: 267 FFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
FF+ + + P EHYAC+VD++AR G + +AY+F+ +PI P A++ GALL GC H
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Query: 326 GKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSF 385
+ LAE V K+ ELEP G YV ++N+YA +W++ + +R+ + + G++K+PG S+
Sbjct: 682 HDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSW 741
Query: 386 VEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+E+ G ++ FVA D S+P +E I L + ++M
Sbjct: 742 IEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 169/384 (44%), Gaps = 73/384 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGY------------------- 41
M+ GV D TF ++K+ + L G +HG+I K+G+
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 42 ------------ESDRFVSNSLIHMYSSFR-------------------DIPNARKVFDG 70
E D NS+I+ Y S D+ VF G
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 71 IPVKNLVSW--------------------NSMLDGYAKCGDISMARQVFDLMPEQDVLSW 110
L+S N++LD Y+KCGD+ A+ VF M ++ V+S+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ +I GY R+G EA+ +FEEM G P+ T+ +VL CA LD+G+ +H ++ +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESL 230
N+L + + +L+DMYAKCG++QEA VF M+ D+ WN++IGG++ + E+L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSE--MRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 231 DLFS-EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
LF+ + PDE T +L ACA + + +NG +VD+
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 290 MARAGQVAEAYQFLCQIPIQPTAS 313
A+ G + A+ I + S
Sbjct: 544 YAKCGALLLAHMLFDDIASKDLVS 567
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 110/224 (49%), Gaps = 39/224 (17%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T + A A L + G IHGYI + GY SDR V+NSL+ MY+ + A +
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD I K+LVSW M+ GY + G+ + EA+
Sbjct: 557 FDDIASKDLVSWTVMIAGYG--------------------------MHGFGK-----EAI 585
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG----RMMHHYVIDNELPLTLVLRTSL 183
A+F +MR +G + +E++ VS+L AC+H G +D+G +M H + ++ T+ +
Sbjct: 586 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH---ECKIEPTVEHYACI 642
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
VDM A+ G + +A + F + P D IW +++ G H VK
Sbjct: 643 VDMLARTGDLIKA-YRFIENMPIPPDATIWGALLCGCRIHHDVK 685
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 156/355 (43%), Gaps = 53/355 (14%)
Query: 62 PNARKVFDGIPVKNLVSWNS-MLDG---------YAKCGDISMARQVFDLMPEQDVLSWS 111
+++ + DG V N + N ++D Y CGD+ A +VFD + + L W+
Sbjct: 105 ADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWN 164
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
L++ + GD+ ++ +F++M SG + + T V + + L ++ G +H +++ +
Sbjct: 165 ILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS 224
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
+ SLV Y K + A VF M DV WNS+I G+ +GL ++ L
Sbjct: 225 GFGERNSVGNSLVAFYLKNQRVDSARKVFDE--MTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLV----------------KEAWY---FFDCLG 272
+F +M + G++ D T +++ + CA L+ +E + D
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 273 KNG-----------MTPKS-EHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGA 317
K G M+ +S Y M+ AR G EA + ++ I P + A
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQD-GRYVGLSNVYAIFRRWDKARSMREA 371
+LN C + LD G+++ E D G + +SN A+ + K SM+EA
Sbjct: 403 VLNCCARYRLLD----EGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEA 451
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 14/190 (7%)
Query: 61 IPNARKVFDGIPVKNLVSWN-SMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ N +++ G+ V+ V +N + L + C D + FD + V + + +
Sbjct: 21 LQNQKEIRSGVRVRKYVIFNRASLRTVSDCVD---SITTFD----RSVTDANTQLRRFCE 73
Query: 120 KGDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
G+ + A+ + + VSG + T+ SVL CA +L G+ + +++ N +
Sbjct: 74 SGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSN 130
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L + L MY CG ++EA VF +K WN ++ A G S+ LF +M
Sbjct: 131 LGSKLSLMYTNCGDLKEASRVFDE--VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 239 VGVKPDEITY 248
GV+ D T+
Sbjct: 189 SGVEMDSYTF 198
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 242/422 (57%), Gaps = 33/422 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR G P+ T + KA+A + G +HG+ K G++S+ V ++L+ +Y+ +
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A+ VFD + +N VSWN+++ G+A R+
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHA-------------------------------RR 240
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
++AL +F+ M G +P+ + S+ AC+ G L++G+ +H Y+I + L
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMYAK G+I +A +F + DV WNS++ +A HG KE++ F EM VG
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDR--LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
++P+EI++L++L+AC+H GL+ E W++++ + K+G+ P++ HY +VD++ RAG + A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+F+ ++PI+PTA++ ALLN C H +L + EL+P G +V L N+YA
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
RW+ A +R+ M+ GVKK P S+VE+ A+H FVA+D+ HP E+I +++++K
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538
Query: 421 HI 422
+
Sbjct: 539 EL 540
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 146/288 (50%), Gaps = 7/288 (2%)
Query: 43 SDRFVSNSLIHMYSSFRDIPNAR----KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQV 98
+DR N+L+ + F+ + R + I ++V N++L+ YAKCG + AR+V
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 99 FDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL 158
F+ MP++D ++W+ LI GY + +AL F +M G PNE T+ SV+ A A
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 159 DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIG 218
G +H + + + + ++L+D+Y + G + +A VF L +DV WN++I
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVF-DALESRNDV-SWNALIA 235
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
G A +++L+LF M G +P +Y +L AC+ G +++ + + K+G
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 279 KSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ ++D+ A++G + +A + ++ + S +LL HG
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW-NSLLTAYAQHG 342
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 240/437 (54%), Gaps = 4/437 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ D T+P + +A A +LG +H Y+ + S F NSL+ +Y
Sbjct: 277 MVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGK 335
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AR +F+ +P K+LVSWN++L GY G I A+ +F M E+++LSW +I G
Sbjct: 336 FDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAEN 395
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +E L +F M+ G +P + + +CA LGA G+ H ++ +L
Sbjct: 396 GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAG 455
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+ MYAKCG ++EA VFR+ M D WN++I HG E++D++ EM G
Sbjct: 456 NALITMYAKCGVVEEARQVFRT--MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEA 299
++PD IT L +L+AC+H GLV + +FD + + P ++HYA ++D++ R+G+ ++A
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDA 573
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ +P +PTA + ALL+GC HG ++L KL L P DG Y+ LSN++A
Sbjct: 574 ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAAT 633
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+W++ +R+ M GVKK S++EM +H F+ D SHP +E +Y+ L + +M
Sbjct: 634 GQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEM 693
Query: 420 KHIVDYENQEYYFYDNE 436
+ + + + +D E
Sbjct: 694 RRLGYVPDTSFVLHDVE 710
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 162/343 (47%), Gaps = 16/343 (4%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELG-LAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
G PD+ TF + A + E + H K+G VSN+L+ +YS P+
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 64 ----ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-DVLSWSCLIDGYV 118
ARKVFD I K+ SW +M+ GY K G + ++ + M + +++++ +I GYV
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+G Y EAL + M SG + +E T SV+ ACA G L G+ +H YV+ E +
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFH 321
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
SLV +Y KCG EA +F M D+ WN+++ G+ G + E+ +F EM
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEK--MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK- 378
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
+ + ++++ ++S A G +E F C+ + G P ++ + A G
Sbjct: 379 ---EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 299 AYQF---LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
Q+ L +I + S AL+ G ++ A V R +
Sbjct: 436 GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 169/374 (45%), Gaps = 57/374 (15%)
Query: 15 FLAKASACL-LKR---ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
+ A CL L+R +L A+HG I G++ + N LI +Y ++ AR++FD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP--EQDVLSWSCLIDGYVRKGDYDEALA 128
I + ++ +M+ GY GDI++AR VF+ P +D + ++ +I G+ D A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH-YVIDNELPLTLVLRTSLVDMY 187
+F +M+ G KP+ T SVL A + +K + H + + + +LV +Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 188 AKCGAIQEALHVFR----------------------------------SGLMKPSDVFIW 213
+KC + LH R G+ + +
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
N+MI G+ G +E+L++ M G++ DE TY +++ ACA GL++ LGK
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQ--------LGK 306
Query: 274 --NGMTPKSEHYA-----CMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ + E ++ +V + + G+ EA ++P + S ALL+G ++ G
Sbjct: 307 QVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSW-NALLSGYVSSG 365
Query: 327 KLDLAETVGRKLIE 340
+ A+ + +++ E
Sbjct: 366 HIGEAKLIFKEMKE 379
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 238/421 (56%), Gaps = 34/421 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L G+ PD+ TFP L KA A E G +H K G + + +V +LI+MY+
Sbjct: 120 ILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYT---- 175
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+C D+ AR VFD + E V+ ++ +I GY R+
Sbjct: 176 ---------------------------ECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+EAL++F EM+ KPNE+T++SVL +CA LG+LD G+ +H Y + + +
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+DM+AKCG++ +A+ +F M+ D W++MI +A HG ++S+ +F M
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEK--MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 241 VKPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
V+PDEIT+L LL+AC+H G V+E YF + K G+ P +HY MVD+++RAG + +A
Sbjct: 327 VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y+F+ ++PI PT + LL C +H LDLAE V ++ EL+ G YV LSN+YA
Sbjct: 387 YEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARN 446
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
++W+ S+R+ M+ K PG S +E++ +H F + D ++ +++ L +V ++
Sbjct: 447 KKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKEL 506
Query: 420 K 420
K
Sbjct: 507 K 507
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 123/240 (51%), Gaps = 3/240 (1%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
+S AR +F+ M E D++ ++ + GY R + E ++F E+ G P+ T S+L
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
ACA AL++GR +H + L + + +L++MY +C + A VF +++P
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVF-DRIVEPC- 194
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V +N+MI G+A E+L LF EM +KP+EIT L++LS+CA G + +
Sbjct: 195 VVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHK 254
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLD 329
K+ + ++D+ A+ G + +A ++ + T + A++ NHGK +
Sbjct: 255 YAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAW-SAMIVAYANHGKAE 313
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 232/391 (59%), Gaps = 11/391 (2%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP 103
D + N+++ + D+ +AR++FD + K +++W +M+ GY DI AR++FD MP
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 104 EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGR 162
E++++SW+ +I GY + E + +F+EM+ + P++VT++SVL A + GAL G
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 163 MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC 222
H +V +L + + T+++DMY+KCG I++A +F M V WN+MI G+A
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDE--MPEKQVASWNAMIHGYAL 352
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH 282
+G + +LDLF M ++ KPDEIT L +++AC HGGLV+E +F + + G+ K EH
Sbjct: 353 NGNARAALDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEH 411
Query: 283 YACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
Y CMVD++ RAG + EA + +P +P +L + L+ C + ++ AE + +K +ELE
Sbjct: 412 YGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELE 471
Query: 343 PHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSH 402
P DG YV L N+YA +RWD ++ M + KK G S +E++ + F++ D +H
Sbjct: 472 PQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTH 531
Query: 403 PSSEQIYMMLGFIVSQMKHIVDYENQEYYFY 433
P I+++LG ++ M N+E Y +
Sbjct: 532 PHRRSIHLVLGDLLMHM-------NEEKYNW 555
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 167/344 (48%), Gaps = 51/344 (14%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ TF L K+ + + GL +H I + G+ +D +VS ++ MY+ F + AR
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNA 135
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE-QDVLSWSCLIDGYVRKGDYDEA 126
FD +P ++ VSW +++ GY +CG++ +A ++FD MP +DV+ ++ ++DG+V+ GD A
Sbjct: 136 FDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSA 195
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
+F+E M H T++ T+++
Sbjct: 196 RRLFDE------------------------------MTHK---------TVITWTTMIHG 216
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH-IVGVKPDE 245
Y I A +F + M ++ WN+MIGG+ + +E + LF EM + PD+
Sbjct: 217 YCNIKDIDAARKLFDA--MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDD 274
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
+T L++L A + G + + + + + K + ++D+ ++ G++ +A + +
Sbjct: 275 VTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDE 334
Query: 306 IPIQPTAS----MLGALLNGCMNHGKLDLAETVGRKLIELEPHQ 345
+P + AS + G LNG LDL T+ +IE +P +
Sbjct: 335 MPEKQVASWNAMIHGYALNGNA-RAALDLFVTM---MIEEKPDE 374
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD +T + A + LG H ++ + + V +++ MYS +I A+++
Sbjct: 272 PDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRI 331
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD +P K + SWN+M+ GYA G+ A +F M
Sbjct: 332 FDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM------------------------- 366
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+ EE KP+E+TM++V+ AC H G +++GR H + + L + +VD+
Sbjct: 367 -MIEE------KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLL 419
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFI 212
+ G+++EA + + +P+ + +
Sbjct: 420 GRAGSLKEAEDLITNMPFEPNGIIL 444
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 272 bits (695), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 226/376 (60%), Gaps = 9/376 (2%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D + N++I Y ++ AR +FD +P ++++SWN++L+GYA GD+ +VFD
Sbjct: 87 ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDD 146
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK-PNEVTMVSVLCACAHLGALDK 160
MPE++V SW+ LI GY + G E L F+ M G PN+ TM VL ACA LGA D
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF 206
Query: 161 GRMMHHY---VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMI 217
G+ +H Y + N++ + + + +L+DMY KCGAI+ A+ VF+ +K D+ WN+MI
Sbjct: 207 GKWVHKYGETLGYNKVDVNV--KNALIDMYGKCGAIEIAMEVFKG--IKRRDLISWNTMI 262
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GM 276
G A HG E+L+LF EM G+ PD++T++ +L AC H GLV++ +F+ + + +
Sbjct: 263 NGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSI 322
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGR 336
P+ EH C+VD+++RAG + +A +F+ ++P++ A + LL + K+D+ E
Sbjct: 323 MPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALE 382
Query: 337 KLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFV 396
+LI+LEP +V LSN+Y R+D A ++ AM G KK G S++E L +F
Sbjct: 383 ELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFY 442
Query: 397 AHDKSHPSSEQIYMML 412
+ + HP +E++ +L
Sbjct: 443 SSGEKHPRTEELQRIL 458
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 271 bits (693), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 240/429 (55%), Gaps = 48/429 (11%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD TFPF+ KA A + G +H I K G+ D +V+N LIH+Y S
Sbjct: 149 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGS---------- 198
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
CG + +AR+VFD MPE+ ++SW+ +ID VR G+YD AL
Sbjct: 199 ---------------------CGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSAL 237
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI---DNELPLTLVLRTSLV 184
+F EM+ S +P+ TM SVL ACA LG+L G H +++ D ++ + ++++ SL+
Sbjct: 238 QLFREMQRSF-EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLI 296
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM--HIVGVK 242
+MY KCG+++ A VF+ M+ D+ WN+MI GFA HG +E+++ F M V+
Sbjct: 297 EMYCKCGSLRMAEQVFQG--MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVR 354
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQ 301
P+ +T++ LL AC H G V + +FD + ++ + P EHY C+VD++ARAG + EA
Sbjct: 355 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 414
Query: 302 FLCQIPIQPTASMLGALLNGCMNHG-KLDLAETVGRKLIELEPHQD-------GRYVGLS 353
+ +P++P A + +LL+ C G ++L+E + R +I + + G YV LS
Sbjct: 415 MVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLS 474
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLG 413
VYA RW+ +R+ M G++K PG S +E++G H F A D SHP ++QIY L
Sbjct: 475 RVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 534
Query: 414 FIVSQMKHI 422
I +++ I
Sbjct: 535 VIDDRLRSI 543
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 38/239 (15%)
Query: 32 IHGYITKAGYESDR---FVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
+H + + Y + F+ ++ + SSF D+ A +VFD I + WN+++ A
Sbjct: 67 LHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAH 126
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-PKPNEVTMVS 147
D+S RK +EA ++ +M G P++ T
Sbjct: 127 --DVS-------------------------RK---EEAFMLYRKMLERGESSPDKHTFPF 156
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
VL ACA++ +G+ +H ++ + + + L+ +Y CG + A VF M
Sbjct: 157 VLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE--MPE 214
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH-GGLVKEAW 265
+ WNSMI G +L LF EM +PD T ++LSACA G L W
Sbjct: 215 RSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTW 272
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 237/424 (55%), Gaps = 40/424 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + GV PD TF F+ KA + L R G A HG + + G+ + +V N+LI +++ D
Sbjct: 103 MEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGD 162
Query: 61 -------------------------------IPNARKVFDGIPVKNLVSWNSMLDGYAKC 89
I A ++FD +P K+ V+WN M+ G KC
Sbjct: 163 LGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKC 222
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
++ AR++FD E+DV++W+ +I GYV G EAL +F+EMR +G P+ VT++S+L
Sbjct: 223 KEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLL 282
Query: 150 CACAHLGALDKGRMMHHYVID-----NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
ACA LG L+ G+ +H Y+++ + + + + +L+DMYAKCG+I A+ VFR
Sbjct: 283 SACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG-- 340
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
+K D+ WN++I G A H + S+++F EM + V P+E+T++ ++ AC+H G V E
Sbjct: 341 VKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEG 399
Query: 265 WYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCM 323
+F + + P +HY CMVD++ RAGQ+ EA+ F+ + I+P A + LL C
Sbjct: 400 RKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACK 459
Query: 324 NHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGY 383
+G ++L + KL+ + + G YV LSN+YA +WD + +R+ + VKK G
Sbjct: 460 IYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGV 519
Query: 384 SFVE 387
S +E
Sbjct: 520 SLIE 523
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 143/340 (42%), Gaps = 19/340 (5%)
Query: 43 SDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISM------AR 96
+DR + ++ + ++I +++ + V L+S S++ +S+ A
Sbjct: 7 NDRTTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAH 66
Query: 97 QVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
++FD +P+ DV + ++ G + ++ ++++ EM G P+ T VL AC+ L
Sbjct: 67 KLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLE 126
Query: 157 ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSM 216
G H V+ + L ++ +L+ +A CG + A +F + W+SM
Sbjct: 127 WRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDS--AKAHKVAWSSM 184
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
G+A G + E++ LF EM D++ + +++ C + A FD + +
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMPY----KDQVAWNVMITGCLKCKEMDSARELFDRFTEKDV 240
Query: 277 TPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
+ M+ G EA ++ + P + +LL+ C G L+ +
Sbjct: 241 VT----WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKR 296
Query: 334 VGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAME 373
+ ++E YVG A+ + K S+ A+E
Sbjct: 297 LHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIE 336
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 246/427 (57%), Gaps = 12/427 (2%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D T A + L E+G I+ ++ +E + N+L+ M+ + AR VF
Sbjct: 147 DEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVF 205
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
D + KN+ W SM+ GY G I AR +F+ P +DV+ W+ +++GYV+ +DEAL
Sbjct: 206 DSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALE 265
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F M+ +G +P+ +VS+L CA GAL++G+ +H Y+ +N + + V+ T+LVDMYA
Sbjct: 266 LFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYA 325
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
KCG I+ AL VF +K D W S+I G A +G+ +LDL+ EM VGV+ D IT+
Sbjct: 326 KCGCIETALEVFYE--IKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITF 383
Query: 249 LNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ +L+AC HGG V E F + ++ + PKSEH +C++D++ RAG + EA + + ++
Sbjct: 384 VAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMR 443
Query: 308 IQPTASMLG---ALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
+ +++ +LL+ N+G + +AE V KL ++E + L++VYA RW+
Sbjct: 444 GESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWED 503
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDK--SHPSSEQIYMMLGFIVSQMKHI 422
++R M+ +G++K PG S +E+ G H F+ D SHP ++I ML + M
Sbjct: 504 VTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLM--- 560
Query: 423 VDYENQE 429
+D E++E
Sbjct: 561 LDLEHKE 567
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 176/373 (47%), Gaps = 74/373 (19%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G++PD+ T P + K+ L K G +HGY KAG E D +VSNSL+ MY+S I
Sbjct: 41 GLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEIT 100
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KVFD +P +++VSWN + I YV G ++
Sbjct: 101 HKVFDEMPQRDVVSWNGL-------------------------------ISSYVGNGRFE 129
Query: 125 EALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+A+ VF+ M + S K +E T+VS L AC+ L L+ G ++ +V+ E +++ + +L
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNAL 188
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV----------------- 226
VDM+ KCG + +A VF S M+ +V W SM+ G+ G +
Sbjct: 189 VDMFCKCGCLDKARAVFDS--MRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVL 246
Query: 227 --------------KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
E+L+LF M G++PD ++LL+ CA G +++ + +
Sbjct: 247 WTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIN 306
Query: 273 KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS----MLGALLNGCMNHGKL 328
+N +T +VD+ A+ G + A + +I + TAS + G +NG M+ L
Sbjct: 307 ENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNG-MSGRAL 365
Query: 329 DL---AETVGRKL 338
DL E VG +L
Sbjct: 366 DLYYEMENVGVRL 378
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 14/282 (4%)
Query: 101 LMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
L+ +L ++ ++ + + LA+F E+R G P+ T+ VL + L + +
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G +H Y + L + SL+ MYA G I+ VF M DV WN +I +
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDE--MPQRDVVSWNGLISSY 122
Query: 221 ACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACA--HGGLVKEAWYFFDCLGKNGMT 277
+G ++++ +F M +K DE T ++ LSAC+ + E Y F + + M+
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRF-VVTEFEMS 181
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRK 337
+ + +VD+ + G + +A + +++ G ++ G++D A R
Sbjct: 182 VRIGN--ALVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVSTGRIDEA----RV 234
Query: 338 LIELEPHQD-GRYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
L E P +D + + N Y F R+D+A + M+ G++
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 240/427 (56%), Gaps = 7/427 (1%)
Query: 1 MLRVGVF-PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
MLR + PD T + A A L K +G IH +I G++ V N+LI MYS
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 60 DIPNARKVFDGIPVKNLV--SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
+ AR++ + K+L + ++LDGY K GD++ A+ +F + ++DV++W+ +I GY
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
+ G Y EA+ +F M G +PN T+ ++L + L +L G+ +H + + ++
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 448
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMK-PSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ +L+ MYAK G I A F L++ D W SMI A HG +E+L+LF M
Sbjct: 449 SVSNALITMYAKAGNITSASRAF--DLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQ 295
+ G++PD ITY+ + SAC H GLV + +FD + + + P HYACMVD+ RAG
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGL 566
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
+ EA +F+ ++PI+P G+LL+ C H +DL + +L+ LEP G Y L+N+
Sbjct: 567 LQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANL 626
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
Y+ +W++A +R++M+ VKK G+S++E+ +H F D +HP +IYM + I
Sbjct: 627 YSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKI 686
Query: 416 VSQMKHI 422
++K +
Sbjct: 687 WDEIKKM 693
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 174/372 (46%), Gaps = 40/372 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ G+ P T + + A E G +H +I K G + VSNSL++MY+ D
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A+ VFD + V+++ SWN+M+ + + G + +A F+ M E+D+++W+ +I G+ ++
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 121 GDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G AL +F +M R S P+ T+ SVL ACA+L L G+ +H +++ ++ ++
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 180 RTSLVDMYAKCGAIQ---------------------------------EALHVFRSGLMK 206
+L+ MY++CG ++ +A ++F S +K
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVS--LK 374
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
DV W +MI G+ HG E+++LF M G +P+ T +LS + +
Sbjct: 375 DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQ 434
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL----CQIPIQPTASMLGALLNGC 322
K+G ++ + A+AG + A + C+ SM+ AL
Sbjct: 435 IHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 323 MNHGKLDLAETV 334
L+L ET+
Sbjct: 495 HAEEALELFETM 506
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 47/342 (13%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
+H + K+G ++ N+L+++YS +ARK+FD +P++ SWN++L Y+K GD
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+ + FD +P++D +SW+ +I GY G Y +A+ V +M G +P + T+ +VL +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL------- 204
A ++ G+ +H +++ L + + SL++MYAKCG A VF +
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 205 ----------------------MKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGV 241
M D+ WNSMI GF G +LD+FS+M +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGK--------NGMTPKSEHYACMVDVMARA 293
PD T ++LSACA+ + C+GK G ++ + +R
Sbjct: 276 SPDRFTLASVLSACANLEKL--------CIGKQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 294 GQVAEAYQFLCQIPIQP-TASMLGALLNGCMNHGKLDLAETV 334
G V A + + Q + ALL+G + G ++ A+ +
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 267 bits (683), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 233/422 (55%), Gaps = 35/422 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ G PD+ T+P L KA L G IHG + K G E+D FV NSLI+MY
Sbjct: 123 MMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMY----- 177
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+CG++ ++ VF+ + + SWS ++
Sbjct: 178 --------------------------GRCGEMELSSAVFEKLESKTAASWSSMVSARAGM 211
Query: 121 GDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G + E L +F M + K E MVS L ACA+ GAL+ G +H +++ N L +++
Sbjct: 212 GMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIV 271
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+TSLVDMY KCG + +ALH+F+ M+ + +++MI G A HG + +L +FS+M
Sbjct: 272 QTSLVDMYVKCGCLDKALHIFQK--MEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNG-MTPKSEHYACMVDVMARAGQVAE 298
G++PD + Y+++L+AC+H GLVKE F + K G + P +EHY C+VD++ RAG + E
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + + IPI+ + L+ C ++L + ++L++L H G Y+ +SN+Y+
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQ 449
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
+ WD R + G+K++PG+S VE+ G HRFV+ D+SHP ++IY ML + Q
Sbjct: 450 GQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQ 509
Query: 419 MK 420
+K
Sbjct: 510 LK 511
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 87 AKCG------DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
AKC ++ A +F + + ++ +I GYV ++EAL + EM G +P
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEP 130
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
+ T +L AC L ++ +G+ +H V L + ++ SL++MY +CG ++ + VF
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVF 190
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHGG 259
++ W+SM+ A G+ E L LF M +K +E ++ L ACA+ G
Sbjct: 191 EK--LESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTG 248
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
+ L +N +VD+ + G + +A ++ + + A++
Sbjct: 249 ALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLT-YSAMI 307
Query: 320 NGCMNHGKLDLAETVGRKLIE--LEP 343
+G HG+ + A + K+I+ LEP
Sbjct: 308 SGLALHGEGESALRMFSKMIKEGLEP 333
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 231/401 (57%), Gaps = 14/401 (3%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVS----WNSMLDGYAKCGDISMARQVF 99
D F +S++ ++S + D+ +++ + K + S +S++D YAK I + +VF
Sbjct: 205 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 264
Query: 100 DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD 159
+ +D +SW+ L+ GYV+ G Y+EAL +F +M + KP V SV+ ACAHL L
Sbjct: 265 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 324
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
G+ +H YV+ + + ++LVDMY+KCG I+ A +F M D W ++I G
Sbjct: 325 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR--MNVLDEVSWTAIIMG 382
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTP 278
A HG E++ LF EM GVKP+++ ++ +L+AC+H GLV EAW +F+ + K G+
Sbjct: 383 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 442
Query: 279 KSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+ EHYA + D++ RAG++ EAY F+ ++ ++PT S+ LL+ C H L+LAE V K+
Sbjct: 443 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 502
Query: 339 IELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAH 398
++ G YV + N+YA RW + +R M + G++K P S++EM H FV+
Sbjct: 503 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 562
Query: 399 DKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYFYDNEGKL 439
D+SHPS ++I L ++ QM+ +E Y D G L
Sbjct: 563 DRSHPSMDKINEFLKAVMEQME-------KEGYVADTSGVL 596
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 167/345 (48%), Gaps = 40/345 (11%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PDH FP + K+ ++ G ++HG+I + G + D + N+L++MY
Sbjct: 100 GRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMY--------- 150
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
AK + R+VF++MP +DV+S++ +I GY + G Y+
Sbjct: 151 ----------------------AKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 188
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+AL + EM + KP+ T+ SVL + + KG+ +H YVI + + + +SLV
Sbjct: 189 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 248
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAK I+++ VF + D WNS++ G+ +G E+L LF +M VKP
Sbjct: 249 DMYAKSARIEDSERVFSR--LYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 306
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+ + +++ ACAH + + + G + +VD+ ++ G + A +
Sbjct: 307 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 366
Query: 305 QI----PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQ 345
++ + TA ++G L+G H + L E + R+ + +P+Q
Sbjct: 367 RMNVLDEVSWTAIIMGHALHG-HGHEAVSLFEEMKRQGV--KPNQ 408
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 41/228 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ V P + F + A A L LG +HGY+ + G+ S+ F++++L+ MYS +
Sbjct: 298 MVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 357
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I ARK+FD + V + VSW +++ G+A
Sbjct: 358 IKAARKIFDRMNVLDEVSWTAIIMGHA-------------------------------LH 386
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPL 175
G EA+++FEEM+ G KPN+V V+VL AC+H+G +D+ M Y ++ EL
Sbjct: 387 GHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEH 446
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
++ D+ + G ++EA + ++P+ +W++++ + H
Sbjct: 447 Y----AAVADLLGRAGKLEEAYNFISKMCVEPTGS-VWSTLLSSCSVH 489
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 117/241 (48%), Gaps = 3/241 (1%)
Query: 99 FDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL 158
F + VL+W +I + + + +ALA F EMR SG P+ SVL +C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 159 DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIG 218
G +H +++ + L +L++MYAK + VF +M DV +N++I
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFE--VMPRKDVVSYNTIIA 179
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
G+A G+ +++L + EM +KPD T ++L + V + + + G+
Sbjct: 180 GYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDS 239
Query: 279 KSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+ +VD+ A++ ++ ++ + ++ + S +L+ G + +G+ + A + R++
Sbjct: 240 DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS-WNSLVAGYVQNGRYNEALRLFRQM 298
Query: 339 I 339
+
Sbjct: 299 V 299
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 238/427 (55%), Gaps = 40/427 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKA---SACLLKREL-GLAIHGYITKAGYESDRFVSNSLIHMYS 56
M R+GV D T+ ++ KA S C + + G IH ++T+ GY S ++ +L+ MY+
Sbjct: 169 MNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA 228
Query: 57 SFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
F + A VF G+PV+N+VSW++M+ YAK G + F
Sbjct: 229 RFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNG------KAF----------------- 265
Query: 117 YVRKGDYDEALAVFEEM--RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
EAL F EM PN VTMVSVL ACA L AL++G+++H Y++ L
Sbjct: 266 --------EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
L + ++LV MY +CG ++ VF M DV WNS+I + HG K+++ +F
Sbjct: 318 SILPVISALVTMYGRCGKLEVGQRVFDR--MHDRDVVSWNSLISSYGVHGYGKKAIQIFE 375
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARA 293
EM G P +T++++L AC+H GLV+E F+ + ++ G+ P+ EHYACMVD++ RA
Sbjct: 376 EMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRA 435
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
++ EA + + + +P + G+LL C HG ++LAE R+L LEP G YV L+
Sbjct: 436 NRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLA 495
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLG 413
++YA + WD+ + +++ +E G++K PG ++E+ ++ FV+ D+ +P EQI+ L
Sbjct: 496 DIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLV 555
Query: 414 FIVSQMK 420
+ MK
Sbjct: 556 KLAEDMK 562
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
L +H +I G + D F++ LI MYS
Sbjct: 96 ALRVHRHILDNGSDQDPFLATKLIGMYSDL------------------------------ 125
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G + AR+VFD ++ + W+ L G +E L ++ +M G + + T V
Sbjct: 126 -GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYV 184
Query: 149 LCACA----HLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
L AC + L KG+ +H ++ + + T+LVDMYA+ G + A +VF G
Sbjct: 185 LKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF--GG 242
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEM--HIVGVKPDEITYLNLLSACAHGGLVK 262
M +V W++MI +A +G E+L F EM P+ +T +++L ACA ++
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302
Query: 263 EAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
+ + + G+ + +V + R G++
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI ++G +A+ V + P++ T ++ C H +L +H +++DN
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
L T L+ MY+ G++ A VF + +++WN++ G +E L L
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDK--TRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGL----VKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+ +M+ +GV+ D TY +L AC + + L + G + +VD
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 289 VMARAGQVAEAYQFLCQIPIQPTAS 313
+ AR G V A +P++ S
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVS 250
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 265 bits (677), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/392 (38%), Positives = 226/392 (57%), Gaps = 8/392 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V P++LTFP L KA+ G+A+HG K G+ D FV S + Y D
Sbjct: 77 MLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGD 136
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ++RK+FD I +V+ NS+LD + G++ A + F MP DV+SW+ +I+G+ +K
Sbjct: 137 LESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKK 196
Query: 121 GDYDEALAVFEEM---RVSGPKPNEVTMVSVLCACAHL--GALDKGRMMHHYVIDNELPL 175
G + +AL VF EM + PNE T VSVL +CA+ G + G+ +H YV+ E+ L
Sbjct: 197 GLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIIL 256
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
T L T+L+DMY K G ++ AL +F ++ V WN++I A +G K++L++F
Sbjct: 257 TTTLGTALLDMYGKAGDLEMALTIFDQ--IRDKKVCAWNAIISALASNGRPKQALEMFEM 314
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAG 294
M V P+ IT L +L+ACA LV F + + + P SEHY C+VD++ RAG
Sbjct: 315 MKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAG 374
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
+ +A F+ +P +P AS+LGALL C H +L TVG++LI L+P G+YV LS
Sbjct: 375 LLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALST 434
Query: 355 VYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
A+ W +A MR+AM G++K P YS +
Sbjct: 435 FNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 32/180 (17%)
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
++ LI Y+ G+Y +LA+F M S +PN +T S++ A ++ G +H +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVF-------------------RSG------- 203
++TS V Y + G ++ + +F R+G
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 204 ---LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM---HIVGVKPDEITYLNLLSACAH 257
M +DV W ++I GF+ GL ++L +F EM + P+E T++++LS+CA+
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 264 bits (675), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 241/422 (57%), Gaps = 35/422 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+++V + P+ +T + LL +LG +HG+I K G+++ + ++I MY
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMY----- 486
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG +++A ++F+ + ++D++SW+ +I +
Sbjct: 487 --------------------------AKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ A+ +F +M VSG + V++ + L ACA+L + G+ +H ++I + L +
Sbjct: 521 DNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE 580
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIV 239
++L+DMYAKCG ++ A++VF++ MK ++ WNS+I HG +K+SL LF EM
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKT--MKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 638
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
G++PD+IT+L ++S+C H G V E FF + ++ G+ P+ EHYAC+VD+ RAG++ E
Sbjct: 639 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 698
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
AY+ + +P P A + G LL C H ++LAE KL++L+P G YV +SN +A
Sbjct: 699 AYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHAN 758
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
R W+ +R M+ V+K PGYS++E++ H FV+ D +HP S IY +L ++ +
Sbjct: 759 AREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGE 818
Query: 419 MK 420
++
Sbjct: 819 LR 820
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 143/298 (47%), Gaps = 33/298 (11%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ P+ +TF + A L +LG+ +HG + +G + + + NSL+ MYS
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS--------- 285
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KCG A ++F +M D ++W+C+I GYV+ G +E
Sbjct: 286 ----------------------KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
+L F EM SG P+ +T S+L + + L+ + +H Y++ + + L + L ++L+D
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID 383
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
Y KC + A ++F DV ++ +MI G+ +GL +SL++F + V + P+E
Sbjct: 384 AYFKCRGVSMAQNIFSQ--CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNE 441
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
IT +++L +K + K G + ++D+ A+ G++ AY+
Sbjct: 442 ITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIF 499
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 120/254 (47%), Gaps = 33/254 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML GV PD TFP L KA L + + ++ G + + FV++SLI Y +
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEY-- 186
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
G I + ++FD + ++D + W+ +++GY +
Sbjct: 187 -----------------------------GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G D + F MR+ PN VT VL CA +D G +H V+ + + ++
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL+ MY+KCG +A +FR +M +D WN MI G+ GL++ESL F EM G
Sbjct: 278 NSLLSMYSKCGRFDDASKLFR--MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 241 VKPDEITYLNLLSA 254
V PD IT+ +LL +
Sbjct: 336 VLPDAITFSSLLPS 349
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 37/348 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV PD +TF L + + E IH YI + D F++++LI
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI-------- 382
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
D Y KC +SMA+ +F DV+ ++ +I GY+
Sbjct: 383 -----------------------DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHN 419
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y ++L +F + PNE+T+VS+L L AL GR +H ++I +
Sbjct: 420 GLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIG 479
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+++DMYAKCG + A +F + D+ WNSMI A ++D+F +M + G
Sbjct: 480 CAVIDMYAKCGRMNLAYEIFER--LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG 537
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ D ++ LSACA+ + K+ + + ++D+ A+ G + A
Sbjct: 538 ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAM 597
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE---LEPHQ 345
+ + S +++ C NHGKL + + +++E + P Q
Sbjct: 598 NVFKTMKEKNIVSW-NSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 6/183 (3%)
Query: 82 MLDGYAKCGDISMARQVF---DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
+L YA CG S ++F DL + W+ +I +VR G ++ALA + +M G
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLR-RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV 134
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
P+ T ++ AC L + V + + +SL+ Y + G I
Sbjct: 135 SPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSK 194
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
+F L K D IWN M+ G+A G + + FS M + + P+ +T+ +LS CA
Sbjct: 195 LFDRVLQK--DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK 252
Query: 259 GLV 261
L+
Sbjct: 253 LLI 255
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 1/182 (0%)
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L AC++ L +G+ +H ++I N + ++ MYA CG+ + +F ++
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
S + WNS+I F +GL+ ++L + +M GV PD T+ L+ AC K +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
D + GM + ++ G++ + ++ +Q + +LNG G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVMLNGYAKCGA 219
Query: 328 LD 329
LD
Sbjct: 220 LD 221
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 264 bits (675), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 216/394 (54%), Gaps = 34/394 (8%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IHG+I +AG +SD V W+S++D Y K
Sbjct: 237 GKEIHGHIVRAGLDSDE-------------------------------VLWSSLMDMYGK 265
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
CG I AR +FD + E+DV+SW+ +ID Y + + E ++F E+ S +PNE T V
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L ACA L + G+ +H Y+ +SLVDMY KCG I+ A HV G KP
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVV-DGCPKP- 383
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW-YF 267
D+ W S+IGG A +G E+L F + G KPD +T++N+LSAC H GLV++ +F
Sbjct: 384 DLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 443
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ K+ ++ S+HY C+VD++AR+G+ + + ++P++P+ + ++L GC +G
Sbjct: 444 YSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGN 503
Query: 328 LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
+DLAE ++L ++EP YV ++N+YA +W++ MR+ M+ +GV K PG S+ E
Sbjct: 504 IDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTE 563
Query: 388 MHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKH 421
+ H F+A D SHP QI L + +MK
Sbjct: 564 IKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKE 597
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 170/325 (52%), Gaps = 4/325 (1%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P T+ L + + E G +H +I +G+ + N L+ MY+ + +ARKV
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD +P ++L SWN M++GYA+ G + AR++FD M E+D SW+ ++ GYV+K +EAL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 128 AVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
++ M RV +PN T+ + A A + + +G+ +H +++ L VL +SL+DM
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
Y KCG I EA ++F + K DV W SMI + +E LFSE+ +P+E
Sbjct: 263 YGKCGCIDEARNIFDKIVEK--DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEY 320
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
T+ +L+ACA + + + G P S + +VD+ + G + A +
Sbjct: 321 TFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC 380
Query: 307 PIQPTASMLGALLNGCMNHGKLDLA 331
P +P +L+ GC +G+ D A
Sbjct: 381 P-KPDLVSWTSLIGGCAQNGQPDEA 404
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 40/260 (15%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ TF + A A L ELG +HGY+T+ G++ F S+SL+ MY+ +I +A+ V
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV 376
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
DG P +LVSW S++ G A+ G DEAL
Sbjct: 377 VDGCPKPDLVSWTSLIGGCAQ-------------------------------NGQPDEAL 405
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-NELPLTLVLRTSLVDM 186
F+ + SG KP+ VT V+VL AC H G ++KG + + + + L T T LVD+
Sbjct: 406 KYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDL 465
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE--MHIVGVKPD 244
A+ G ++ V MKPS F+W S++GG + +G ++DL E + ++P+
Sbjct: 466 LARSGRFEQLKSVISEMPMKPSK-FLWASVLGGCSTYG----NIDLAEEAAQELFKIEPE 520
Query: 245 E-ITYLNLLSACAHGGLVKE 263
+TY+ + + A G +E
Sbjct: 521 NPVTYVTMANIYAAAGKWEE 540
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
KP T +++ C+ AL++G+ +H ++ + +V+ L+ MYAKCG++ +A
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
VF M D+ WN M+ G+A GL++E+ LF EM
Sbjct: 142 VFDE--MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 223/407 (54%), Gaps = 34/407 (8%)
Query: 31 AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
AIHGY K+ + S VS +L +YS K
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYS-------------------------------KLN 368
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
+I AR++FD PE+ + SW+ +I GY + G ++A+++F EM+ S PN VT+ +L
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
ACA LGAL G+ +H V + ++ + T+L+ MYAKCG+I EA +F LM +
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF--DLMTKKNE 486
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
WN+MI G+ HG +E+L++F EM G+ P +T+L +L AC+H GLVKE F+
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
Query: 271 -LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLD 329
+ + G P +HYACMVD++ RAG + A QF+ + I+P +S+ LL C H +
Sbjct: 547 MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTN 606
Query: 330 LAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMH 389
LA TV KL EL+P G +V LSN+++ R + +A ++R+ ++ + K+PGY+ +E+
Sbjct: 607 LARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIG 666
Query: 390 GALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYFYDNE 436
H F + D+SHP ++IY L + +M+ E +D E
Sbjct: 667 ETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVE 713
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 152/335 (45%), Gaps = 36/335 (10%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ T+ F A++ G IHG G +S+ + ++++ MY F + +ARKV
Sbjct: 117 PNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKV 176
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD +P K+ + WN+M+ GY K + QVF +D+++ SC D A+
Sbjct: 177 FDRMPEKDTILWNTMISGYRKNEMYVESIQVF-----RDLINESCTRLDTTTLLDILPAV 231
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
A +E+R L H A G H YV+ T + +Y
Sbjct: 232 AELQELR--------------LGMQIHSLATKTGCYSHDYVL-----------TGFISLY 266
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+KCG I+ +FR KP D+ +N+MI G+ +G + SL LF E+ + G + T
Sbjct: 267 SKCGKIKMGSALFRE-FRKP-DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
++L+ H L+ + CL N ++ S A + V ++ ++ A + + P
Sbjct: 325 LVSLVPVSGHLMLIYAIHGY--CLKSNFLSHASVSTA-LTTVYSKLNEIESARKLFDESP 381
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
+ S A+++G +G + A ++ R++ + E
Sbjct: 382 EKSLPSW-NAMISGYTQNGLTEDAISLFREMQKSE 415
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 107/251 (42%), Gaps = 43/251 (17%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ +T + A A L LG +H + +ES +VS +LI MY+ I AR++
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD + KN V+WN+M+ GY G EAL
Sbjct: 478 FDLMTKKNEVTWNTMISGYG-------------------------------LHGQGQEAL 506
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPLTLVLRTS 182
+F EM SG P VT + VL AC+H G + +G M+H Y + +
Sbjct: 507 NIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK----HYAC 562
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
+VD+ + G +Q AL + ++P +W +++G AC +L + +
Sbjct: 563 MVDILGRAGHLQRALQFIEAMSIEPGSS-VWETLLG--ACRIHKDTNLARTVSEKLFELD 619
Query: 243 PDEITYLNLLS 253
PD + Y LLS
Sbjct: 620 PDNVGYHVLLS 630
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 5/252 (1%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPNEVTMVSV 148
G I AR +F + DV ++ L+ G+ +L+VF +R S KPN T
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ A + GR++H + + L+L +++V MY K +++A VF M
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDR--MPEK 183
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
D +WN+MI G+ + + ES+ +F ++ + + D T L++L A A ++
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI 243
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
K G + + ++ G++ + +P A+++G ++G+
Sbjct: 244 HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSNGE 302
Query: 328 LDLAETVGRKLI 339
+L+ ++ ++L+
Sbjct: 303 TELSLSLFKELM 314
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 240/419 (57%), Gaps = 10/419 (2%)
Query: 13 FPFLAKASACLLKRELGL--AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
F F +AC+ R+L L HG + AG+ S+ +S S+I Y+ + +A++ FD
Sbjct: 180 FSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
+ VK++ W +++ GYAK GD+ A ++F MPE++ +SW+ LI GYVR+G + AL +F
Sbjct: 240 MTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+M G KP + T S LCA A + +L G+ +H Y+I + ++ +SL+DMY+K
Sbjct: 300 RKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKS 359
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G+++ + VFR K VF WN+MI A HGL ++L + +M V+P+ T +
Sbjct: 360 GSLEASERVFRICDDKHDCVF-WNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVV 418
Query: 251 LLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
+L+AC+H GLV+E +F+ + ++G+ P EHYAC++D++ RAG E + + ++P +
Sbjct: 419 ILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE 478
Query: 310 PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMR 369
P + A+L C HG +L + +LI+L+P Y+ LS++YA +W+ +R
Sbjct: 479 PDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLR 538
Query: 370 EAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSS--EQIYMMLGFIVSQMKHIVDYE 426
M++ V K S++E+ + F D SH + E+IY FI+ + +++ E
Sbjct: 539 GVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIY----FILHNLAAVIEEE 593
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 160/312 (51%), Gaps = 10/312 (3%)
Query: 29 GLAIHGYITKAGYES-DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
G IH ++ G++ + +SN LI MY +A KVFD + ++NL SWN+M+ GY
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
K G + AR VFD MPE+DV+SW+ ++ GY + G+ EAL ++E R SG K NE +
Sbjct: 125 KSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAG 184
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L AC L R H V+ +VL S++D YAKCG ++ A F M
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE--MTV 242
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
D+ IW ++I G+A G ++ + LF EM + + +++ L++ G A
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEM----PEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 268 FDCLGKNGMTPKSEHYA---CMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
F + G+ P+ ++ C +A E + ++ + ++P A ++ +L++
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Query: 325 HGKLDLAETVGR 336
G L+ +E V R
Sbjct: 359 SGSLEASERVFR 370
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 36/256 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ +GV P+ TF ASA + G IHGY+ + + V +SLI MYS
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYS---- 357
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-DVLSWSCLIDGYVR 119
K G + + +VF + ++ D + W+ +I +
Sbjct: 358 ---------------------------KSGSLEASERVFRICDDKHDCVFWNTMISALAQ 390
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLV 178
G +AL + ++M +PN T+V +L AC+H G +++G R + + +
Sbjct: 391 HGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQE 450
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L+D+ + G +E + +P D IWN+++G HG E L + +
Sbjct: 451 HYACLIDLLGRAGCFKELMRKIEEMPFEP-DKHIWNAILGVCRIHG--NEELGKKAADEL 507
Query: 239 VGVKPDEITYLNLLSA 254
+ + P+ LLS+
Sbjct: 508 IKLDPESSAPYILLSS 523
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 235/427 (55%), Gaps = 38/427 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V P + TF + K+ A L +G +H + +G+ D +V +L+ YS
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYS---- 153
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCGD+ ARQVFD MPE+ +++W+ L+ G+ +
Sbjct: 154 ---------------------------KCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G DEA+ VF +MR SG +P+ T VS+L ACA GA+ G +H Y+I L L + L
Sbjct: 187 GLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLG 246
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH-IV 239
T+L+++Y++CG + +A VF MK ++V W +MI + HG +++++LF++M
Sbjct: 247 TALINLYSRCGDVGKAREVFDK--MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDC 304
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
G P+ +T++ +LSACAH GLV+E + + K+ + P EH+ CMVD++ RAG + E
Sbjct: 305 GPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDE 364
Query: 299 AYQFLCQIPIQPTAS---MLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
AY+F+ Q+ A+ + A+L C H DL + ++LI LEP G +V LSN+
Sbjct: 365 AYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNI 424
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
YA+ + D+ +R+ M R ++K GYS +E+ + F D+SH + +IY L +
Sbjct: 425 YALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETL 484
Query: 416 VSQMKHI 422
+S+ K I
Sbjct: 485 ISRCKEI 491
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 130/295 (44%), Gaps = 34/295 (11%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
+H ++ GY R + LI + S R I +F +P+ + +NS++ +K
Sbjct: 28 VHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLR- 86
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
L C+ A + M S P+ T SV+ +
Sbjct: 87 ----------------LPLHCV--------------AYYRRMLSSNVSPSNYTFTSVIKS 116
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
CA L AL G+ +H + + + L ++ +LV Y+KCG ++ A VF M +
Sbjct: 117 CADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDR--MPEKSIV 174
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
WNS++ GF +GL E++ +F +M G +PD T+++LLSACA G V + +
Sbjct: 175 AWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYI 234
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
G+ + ++++ +R G V +A + ++ + + A+++ HG
Sbjct: 235 ISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHG 288
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 216/363 (59%), Gaps = 3/363 (0%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NL ++LD YAKCG I A QVF+ M ++ ++WS ++ GYV+ +Y+EAL ++ +
Sbjct: 188 NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ 247
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
+ N+ T+ SV+CAC++L AL +G+ MH + + + + +S VDMYAKCG+++
Sbjct: 248 RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLR 307
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
E+ +F ++ ++ +WN++I GFA H KE + LF +M G+ P+E+T+ +LLS
Sbjct: 308 ESYIIFSE--VQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSV 365
Query: 255 CAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
C H GLV+E FF + G++P HY+CMVD++ RAG ++EAY+ + IP PTAS
Sbjct: 366 CGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS 425
Query: 314 MLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAME 373
+ G+LL C + L+LAE KL ELEP G +V LSN+YA ++W++ R+ +
Sbjct: 426 IWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLR 485
Query: 374 RMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYFY 433
VKK G S++++ +H F + HP +I L +V + + + E+ +
Sbjct: 486 DCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELH 545
Query: 434 DNE 436
D E
Sbjct: 546 DVE 548
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 132/248 (53%), Gaps = 3/248 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N +++ Y+KCG + +ARQVFD M E+ ++SW+ +I Y R EAL +F EMR G K
Sbjct: 92 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 151
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+E T+ SVL AC + + +H + + L L + T+L+D+YAKCG I++A+ V
Sbjct: 152 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 211
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F S M+ W+SM+ G+ + +E+L L+ + ++ ++ T +++ AC++
Sbjct: 212 FES--MQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 269
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
+ E + K+G + VD+ A+ G + E+Y ++ + + ++
Sbjct: 270 ALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ-EKNLELWNTII 328
Query: 320 NGCMNHGK 327
+G H +
Sbjct: 329 SGFAKHAR 336
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R+ + + T + A + L G +H I K+G+ S+ FV++S + MY+ +
Sbjct: 248 RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLR 307
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+ +F + KNL WN+++ G+AK AR P+
Sbjct: 308 ESYIIFSEVQEKNLELWNTIISGFAK-----HAR------PK------------------ 338
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVLRT 181
E + +FE+M+ G PNEVT S+L C H G +++GR + L +V +
Sbjct: 339 --EVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 396
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+VD+ + G + EA + +S P+ IW S++
Sbjct: 397 CMVDILGRAGLLSEAYELIKSIPFDPT-ASIWGSLLAS 433
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
R S N + +L CA GA+ + + H +I +L + L L++ Y+KCG +
Sbjct: 45 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 104
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
+ A VF G+++ S V WN+MIG + + + E+LD+F EM G K E T ++LS
Sbjct: 105 ELARQVF-DGMLERSLVS-WNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLS 162
Query: 254 AC 255
AC
Sbjct: 163 AC 164
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 261 bits (667), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/440 (33%), Positives = 233/440 (52%), Gaps = 44/440 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G D T + K L G +H Y K+GY+ D +VS+ +
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGI--------- 558
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD Y KCGD+S A+ FD +P D ++W+ +I G +
Sbjct: 559 ----------------------LDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIEN 596
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ + A VF +MR+ G P+E T+ ++ A + L AL++GR +H + +
Sbjct: 597 GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 656
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSLVDMYAKCG+I +A +F+ ++ ++ WN+M+ G A HG KE+L LF +M +G
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKR--IEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG 714
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEA 299
+KPD++T++ +LSAC+H GLV EA+ + G G+ P+ EHY+C+ D + RAG V +A
Sbjct: 715 IKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQA 774
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + ++ +ASM LL C G + + V KL+ELEP YV LSN+YA
Sbjct: 775 ENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAA 834
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+WD+ + R M+ VKK PG+S++E+ +H FV D+S+ +E IY + ++ +
Sbjct: 835 SKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDI 894
Query: 420 KH----------IVDYENQE 429
K +VD E +E
Sbjct: 895 KQEGYVPETDFTLVDVEEEE 914
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 148/328 (45%), Gaps = 36/328 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLK-RELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
+LR G+ PD T + KA++ L + L +H + K SD FVS +LI YS R
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ A +F+ R FDL ++W+ ++ GY +
Sbjct: 467 CMKEAEILFE--------------------------RHNFDL------VAWNAMMAGYTQ 494
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
D + L +F M G + ++ T+ +V C L A+++G+ +H Y I + L L +
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+ ++DMY KCG + A F S + P DV W +MI G +G + + +FS+M ++
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDS-IPVPDDV-AWTTMISGCIENGEEERAFHVFSQMRLM 612
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
GV PDE T L A + +++ K T +VD+ A+ G + +A
Sbjct: 613 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 672
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGK 327
Y +I + + A+L G HG+
Sbjct: 673 YCLFKRIEMMNITAW-NAMLVGLAQHGE 699
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 40/264 (15%)
Query: 31 AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
+ HGY K G + D FV+ +L+++Y F + + +F+ +P +++V WN ML Y + G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 91 ------DISMARQVFDLMPEQDVLSWSCLIDG---------------------------- 116
D+S A L P + L I G
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNK 285
Query: 117 ----YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
Y+ G Y L F +M S + ++VT + +L + +L G+ +H +
Sbjct: 286 GLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG 345
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
L L L + SL++MY K A VF + M D+ WNS+I G A +GL E++ L
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDN--MSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 233 FSEMHIVGVKPDEITYLNLLSACA 256
F ++ G+KPD+ T ++L A +
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 144/333 (43%), Gaps = 38/333 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ V D +TF + + + LG +H K G + VSNSLI+MY R
Sbjct: 306 MVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRK 365
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AR VFD M E+D++SW+ +I G +
Sbjct: 366 F-------------------------------GFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL-GALDKGRMMH-HYVIDNELPLTLV 178
G EA+ +F ++ G KP++ TM SVL A + L L + +H H + N + + V
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
T+L+D Y++ ++EA +F D+ WN+M+ G+ ++L LF+ MH
Sbjct: 455 -STALIDAYSRNRCMKEAEILFER---HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
G + D+ T + C + + K+G + ++D+ + G ++
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
A IP+ P +++GC+ +G+ + A
Sbjct: 571 AQFAFDSIPV-PDDVAWTTMISGCIENGEEERA 602
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
LG H I +RF+ N+LI MYS + AR+VFD +P ++LVSWNS+L YA
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+ S C+++ + +A +F +R + +T+
Sbjct: 117 Q--------------------SSECVVE------NIQQAFLLFRILRQDVVYTSRMTLSP 150
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L C H G + H Y L + +LV++Y K G ++E +F M
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEE--MPY 208
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
DV +WN M+ + G +E++DL S H G+ P+EIT L LL+
Sbjct: 209 RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT-LRLLA 253
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 226/404 (55%), Gaps = 48/404 (11%)
Query: 31 AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
AIHG++ K G + DRFV N+L+ MYS + G
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYS-------------------------------RLG 454
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM------------RVSGP 138
I +A ++F M ++D+++W+ +I GYV +++AL + +M RVS
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS-L 513
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
KPN +T++++L +CA L AL KG+ +H Y I N L + + ++LVDMYAKCG +Q +
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF + +V WN +I + HG +E++DL M + GVKP+E+T++++ +AC+H
Sbjct: 574 VFDQ--IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHS 631
Query: 259 GLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ-PTASMLG 316
G+V E F + + G+ P S+HYAC+VD++ RAG++ EAYQ + +P A
Sbjct: 632 GMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS 691
Query: 317 ALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMG 376
+LL H L++ E + LI+LEP+ YV L+N+Y+ WDKA +R M+ G
Sbjct: 692 SLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQG 751
Query: 377 VKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
V+K PG S++E +H+FVA D SHP SE++ L + +M+
Sbjct: 752 VRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 795
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 139/301 (46%), Gaps = 39/301 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRF-VSNSLIHMYSSFR 59
M+ +G+ PD+ FP L KA A L ELG IH ++ K GY D V+N+L+++Y
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 147
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
D KVFD I +N VSWNS++ MA + F M +++V
Sbjct: 148 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV------------ 195
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL---GALDKGRMMHHYVIDNELPLT 176
+P+ T+VSV+ AC++L L G+ +H Y + +
Sbjct: 196 -------------------EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS 236
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
++ T LV MY K G + + + G D+ WN+++ + + E+L+ EM
Sbjct: 237 FIINT-LVAMYGKLGKLASSKVLL--GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY-ACMVDVMARAGQ 295
+ GV+PDE T ++L AC+H +++ KNG ++ + +VD+ Q
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 296 V 296
V
Sbjct: 354 V 354
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 139/320 (43%), Gaps = 46/320 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAG-YESDRFVSNSLIHMYSSFR 59
M+ GV PD T + A + L G +H Y K G + + FV ++L+ MY
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC--- 349
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
N ++V G R+VFD M ++ + W+ +I GY +
Sbjct: 350 ---NCKQVLSG-------------------------RRVFDGMFDRKIGLWNAMIAGYSQ 381
Query: 120 KGDYDEALAVFEEMRVS-GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
EAL +F M S G N TM V+ AC GA + +H +V+ L
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH- 237
++ +L+DMY++ G I A+ +F G M+ D+ WN+MI G+ +++L L +M
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIF--GKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 238 ----------IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
V +KP+ IT + +L +CA + + KN + + +V
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559
Query: 288 DVMARAGQVAEAYQFLCQIP 307
D+ A+ G + + + QIP
Sbjct: 560 DMYAKCGCLQMSRKVFDQIP 579
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 8/221 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++ Y K G ++ ++ + +D+++W+ ++ + EAL EM + G +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVLRTSLVDMYAKCGAIQEALH 198
P+E T+ SVL AC+HL L G+ +H Y + N L + ++LVDMY C +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAH 257
VF M + +WN+MI G++ + KE+L LF M G+ + T ++ AC
Sbjct: 360 VFDG--MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 258 GGLV--KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
G KEA + F + K G+ ++D+ +R G++
Sbjct: 418 SGAFSRKEAIHGF--VVKRGLDRDRFVQNTLMDMYSRLGKI 456
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 40/255 (15%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
RV + P+ +T + + A L G IH Y K +D V ++L+ MY+ +
Sbjct: 510 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQ 569
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+RKVFD IP KN+++WN +I Y G+
Sbjct: 570 MSRKVFDQIPQKNVITWN-------------------------------VIIMAYGMHGN 598
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRT 181
EA+ + M V G KPNEVT +SV AC+H G +D+G R+ + D + +
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 658
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSD---VFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+VD+ + G I+EA + M P D W+S++G H ++ + + ++
Sbjct: 659 CVVDLLGRAGRIKEAYQLMN---MMPRDFNKAGAWSSLLGASRIHNNLE--IGEIAAQNL 713
Query: 239 VGVKPDEITYLNLLS 253
+ ++P+ ++ LL+
Sbjct: 714 IQLEPNVASHYVLLA 728
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 244/448 (54%), Gaps = 10/448 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + + P TF L KA + LG H + +V N++I MY
Sbjct: 140 MRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCES 199
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I ARKVFD +P ++++SW ++ YA+ G++ A ++F+ +P +D+++W+ ++ G+ +
Sbjct: 200 IDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQN 259
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD-KGRMMHHYVIDNELPLT-LV 178
EAL F+ M SG + +EVT+ + ACA LGA R + P +V
Sbjct: 260 AKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVV 319
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ ++L+DMY+KCG ++EA++VF S M +VF ++SMI G A HG +E+L LF M
Sbjct: 320 IGSALIDMYSKCGNVEEAVNVFMS--MNNKNVFTYSSMILGLATHGRAQEALHLFHYMVT 377
Query: 239 -VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQV 296
+KP+ +T++ L AC+H GLV + FD + + G+ P +HY CMVD++ R G++
Sbjct: 378 QTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRL 437
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY 356
EA + + + ++P + GALL C H ++AE L ELEP G Y+ LSNVY
Sbjct: 438 QEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVY 497
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSF-VEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
A W +R+ ++ G+KK+P S+ V+ +G +H+F + +HP S +I L +
Sbjct: 498 ASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEEL 557
Query: 416 VSQMK---HIVDYENQEYYFYDNEGKLL 440
V ++ + D + Y DN +L+
Sbjct: 558 VERLTVLGYQPDLSSVPYDVSDNAKRLI 585
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 63/321 (19%)
Query: 11 LTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
L ++K C+ ++ IHG++ + G + ++ LI + G
Sbjct: 48 LVSSLISKLDDCINLNQIK-QIHGHVLRKGLDQSCYILTKLIRTLTKL-----------G 95
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
+P +D YA R+V + + ++ W+ +I GY +G +DEA+A++
Sbjct: 96 VP----------MDPYA--------RRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMY 137
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
MR P T ++L AC + L+ GR H + + +++DMY KC
Sbjct: 138 GCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKC 197
Query: 191 GAIQEALHVF-------------------RSGLMK----------PSDVFIWNSMIGGFA 221
+I A VF R G M+ D+ W +M+ GFA
Sbjct: 198 ESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFA 257
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE 281
+ +E+L+ F M G++ DE+T +SACA G K A K+G +P S+
Sbjct: 258 QNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSP-SD 316
Query: 282 HY---ACMVDVMARAGQVAEA 299
H + ++D+ ++ G V EA
Sbjct: 317 HVVIGSALIDMYSKCGNVEEA 337
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 232/397 (58%), Gaps = 8/397 (2%)
Query: 32 IHGYITKAGY---ESDRFVSNSLIHMYSSFRDIPNARKVFDGIP-VKNLVSWNSMLDGYA 87
+HGY KAG E + + N+L+ Y+ ++ A K+F G+ + LVS+NS+L GY
Sbjct: 454 VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 513
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
G A+ +F M D+ +WS ++ Y +EA+ VF E++ G +PN VT+++
Sbjct: 514 NSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMN 573
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L CA L +L R H Y+I L + L+ +L+D+YAKCG+++ A VF+S +
Sbjct: 574 LLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARR- 631
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
D+ ++ +M+ G+A HG KE+L ++S M +KPD + +L+AC H GL+++
Sbjct: 632 -DLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQI 690
Query: 268 FDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+D + +GM P E YAC VD++AR G++ +AY F+ Q+P++P A++ G LL C +
Sbjct: 691 YDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYN 750
Query: 327 KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
++DL +V L++ E G +V +SN+YA +W+ +R M++ +KK G S++
Sbjct: 751 RMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWL 810
Query: 387 EMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIV 423
E+ G + FV+ D SHP + I+ ++ + QMK V
Sbjct: 811 EVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKEPV 847
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 112/256 (43%), Gaps = 39/256 (15%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI-PNARK 66
P +TF + L G ++H YI KAG E D V N+L+ MY+ F I P+A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
FDG + ++DV+SW+ +I G+ +A
Sbjct: 180 AFDG-------------------------------IADKDVVSWNAIIAGFSENNMMADA 208
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLG---ALDKGRMMHHYVIDNE-LPLTLVLRTS 182
F M +PN T+ +VL CA + A GR +H YV+ L + + S
Sbjct: 209 FRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNS 268
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGV 241
LV Y + G I+EA +F M D+ WN +I G+A + ++ LF + H V
Sbjct: 269 LVSFYLRVGRIEEAASLFTR--MGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 242 KPDEITYLNLLSACAH 257
PD +T +++L CA
Sbjct: 327 SPDSVTIISILPVCAQ 342
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 34/256 (13%)
Query: 2 LRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
L G DH F + KA A + G A+HG + K G+ + VS S+++MY+ R +
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
+ +K+F + + V WN +L G LS SC
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTG----------------------LSVSC--------- 101
Query: 122 DYDEALAVFEEMRVSG-PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
E + F+ M + PKP+ VT VL C LG G+ MH Y+I L ++
Sbjct: 102 -GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVG 160
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+LV MYAK G I + G+ DV WN++I GF+ + ++ ++ F M
Sbjct: 161 NALVSMYAKFGFIFPDAYTAFDGI-ADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEP 219
Query: 241 VKPDEITYLNLLSACA 256
+P+ T N+L CA
Sbjct: 220 TEPNYATIANVLPVCA 235
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 143/340 (42%), Gaps = 40/340 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR---ELGLAIHGYITKAGY-ESDRFVSNSLIHMYS 56
ML+ P++ T + A + K G IH Y+ + + ++ FV NSL+ Y
Sbjct: 215 MLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYL 274
Query: 57 SFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
I A +F + K+LVSWN ++ GYA + A Q+F
Sbjct: 275 RVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLF---------------HN 319
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
V KGD P+ VT++S+L CA L L G+ +H Y++ + L
Sbjct: 320 LVHKGDV---------------SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 177 -LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
+ +L+ YA+ G A F LM D+ WN+++ FA + L+L
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAF--SLMSTKDIISWNAILDAFADSPKQFQFLNLLHH 422
Query: 236 MHIVGVKPDEITYLNLLSACAHG---GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
+ + D +T L+LL C + G VKE + G + + ++D A+
Sbjct: 423 LLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAK 482
Query: 293 AGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAE 332
G V A++ + + T +LL+G +N G D A+
Sbjct: 483 CGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQ 522
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 149/353 (42%), Gaps = 53/353 (15%)
Query: 19 ASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP-----V 73
AS C + L H + K D S++ + + D+ + +++ I +
Sbjct: 305 ASNCEWFKAFQL-FHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLL 363
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
++ N+++ YA+ GD S A F LM +D++SW+ ++D + + L + +
Sbjct: 364 EDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHL 423
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI------DNELPLTLVLRTSLVDMY 187
+ VT++S+L C ++ + K + +H Y + D E P L +L+D Y
Sbjct: 424 LNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEP---KLGNALLDAY 480
Query: 188 AKCGAIQEALHVF-----RSGL-------------------------MKPSDVFIWNSMI 217
AKCG ++ A +F R L M +D+ W+ M+
Sbjct: 481 AKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMV 540
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG---LVKEAWYFFDCLGKN 274
+A E++ +F E+ G++P+ +T +NLL CA LV++ + G
Sbjct: 541 RIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG 600
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ K ++DV A+ G + AY Q + M A++ G HG+
Sbjct: 601 DIRLKGT----LLDVYAKCGSLKHAYSVF-QSDARRDLVMFTAMVAGYAVHGR 648
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 257 bits (657), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 237/417 (56%), Gaps = 45/417 (10%)
Query: 6 VFPDHLTFPFLAKA--SACLLKRELGLAIHGYITKAG-YESDRFVSNSLIHMYSSFRDIP 62
+ P +LTF FL A AC +G IH ++ K G + SD V ++ +Y + +
Sbjct: 9 IAPSYLTFHFLIVACLKACFFS--VGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLL 66
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+ARKVF D +P+ DV+ W L++GYVR G
Sbjct: 67 DARKVF-------------------------------DEIPQPDVVKWDVLMNGYVRCGL 95
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRT 181
E L VF EM V G +P+E ++ + L ACA +GAL +G+ +H +V + + + T
Sbjct: 96 GSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGT 155
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-G 240
+LVDMYAKCG I+ A+ VF+ + +VF W ++IGG+A +G K+++ + G
Sbjct: 156 ALVDMYAKCGCIETAVEVFKK--LTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDG 213
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEA 299
+KPD + L +L+ACAHGG ++E + + + +TPK EHY+C+VD+M RAG++ +A
Sbjct: 214 IKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDA 273
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP----HQDGRYVGLSNV 355
+ ++P++P AS+ GALLNGC H ++L E + L++LE ++ V LSN+
Sbjct: 274 LNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNI 333
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
Y +R +A +R +E+ GV+K+PG+S +E+ G + +FV+ D SHP+ QI+ ++
Sbjct: 334 YFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVI 390
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 241/428 (56%), Gaps = 45/428 (10%)
Query: 6 VFPDHLTFPFLAKA--SACLLKRELGLAIHGYITKAG-YESDRFVSNSLIHMYSSFRDIP 62
+ P +LTF FL A AC +G IH ++ K G + SD V ++ +Y
Sbjct: 112 ITPSYLTFHFLIVACLKACFFS--VGKQIHCWVVKNGVFLSDGHVQTGVLRIYV------ 163
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+ +FD AR+VFD +P+ DV+ W L++GYVR G
Sbjct: 164 EDKLLFD-------------------------ARKVFDEIPQPDVVKWDVLMNGYVRCGL 198
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRT 181
E L VF+EM V G +P+E ++ + L ACA +GAL +G+ +H +V + + + T
Sbjct: 199 GSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGT 258
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-G 240
+LVDMYAKCG I+ A+ VF + +VF W ++IGG+A +G K++ + G
Sbjct: 259 ALVDMYAKCGCIETAVEVFEK--LTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDG 316
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEA 299
+KPD + L +L+ACAHGG ++E + + + G+TPK EHY+C+VD+M RAG++ +A
Sbjct: 317 IKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDA 376
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP----HQDGRYVGLSNV 355
+ ++P++P AS+ GALLNGC H ++L E + L++LE ++ V LSN+
Sbjct: 377 LDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNI 436
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
Y +R +A +R +E+ G++K+PG+S +E+ G + +FV+ D SHP+ QI+ ++ +
Sbjct: 437 YFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLL 496
Query: 416 VSQMKHIV 423
I+
Sbjct: 497 SVDASQIL 504
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 41/229 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGY-ESDRFVSNSLIHMYSSFR 59
ML G+ PD + A A + G IH ++ K + ESD FV +L+ MY+
Sbjct: 209 MLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCG 268
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
I A +VF+ + +N+ SW +++ GYA G A D + +D
Sbjct: 269 CIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERED------------- 315
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLV 178
G KP+ V ++ VL ACAH G L++GR M ++N E +
Sbjct: 316 -----------------GIKPDSVVLLGVLAACAHGGFLEEGRTM----LENMEARYGIT 354
Query: 179 LR----TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+ + +VD+ + G + +AL + MKP +W +++ G H
Sbjct: 355 PKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPL-ASVWGALLNGCRTH 402
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 219/394 (55%), Gaps = 10/394 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGL--AIHGYITKAGYESDRFVSNSLIHMYSSF 58
M R V PD TFPF+ KA A +L L +H + G SD F N+LI +YS
Sbjct: 106 MRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLI 165
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
I +A ++FD P +++V++N ++DG K +I AR++FD MP +D++SW+ LI GY
Sbjct: 166 APIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYA 225
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ EA+ +F+EM G KP+ V +VS L ACA G KG+ +H Y L +
Sbjct: 226 QMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSF 285
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L T LVD YAKCG I A+ +F L +F WN+MI G A HG + ++D F +M
Sbjct: 286 LATGLVDFYAKCGFIDTAMEIFE--LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVS 343
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVA 297
G+KPD +T++++L C+H GLV EA FD + + + +HY CM D++ RAG +
Sbjct: 344 SGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIE 403
Query: 298 EAYQFLCQIPI----QPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
EA + + Q+P + LL GC HG +++AE ++ L P G Y +
Sbjct: 404 EAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMV 463
Query: 354 NVYAIFRRWDKARSMREAMER-MGVKKSPGYSFV 386
+YA RW++ +RE ++R VKK+ G+S V
Sbjct: 464 EMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 235/400 (58%), Gaps = 8/400 (2%)
Query: 29 GLAIHGYITKAGY------ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSM 82
GLA +G + +A E + N++I Y+ I A ++F +P ++ SWN+M
Sbjct: 211 GLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTM 270
Query: 83 LDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPN 141
+ G+ + +++ A +FD MPE++V+SW+ +I GYV + +EAL VF +M G KPN
Sbjct: 271 ITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPN 330
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
T VS+L AC+ L L +G+ +H + + ++ ++L++MY+K G + A +F
Sbjct: 331 VGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFD 390
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+GL+ D+ WNSMI +A HG KE+++++++M G KP +TYLNLL AC+H GLV
Sbjct: 391 NGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLV 450
Query: 262 KEAWYFFDCLGKNGMTP-KSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLN 320
++ FF L ++ P + EHY C+VD+ RAG++ + F+ + + S GA+L+
Sbjct: 451 EKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILS 510
Query: 321 GCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKS 380
C H ++ +A+ V +K++E G YV +SN+YA + ++A MR M+ G+KK
Sbjct: 511 ACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQ 570
Query: 381 PGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
PG S+V++ H FV DKSHP E + +L + ++M+
Sbjct: 571 PGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 153/305 (50%), Gaps = 49/305 (16%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLS 109
+++ Y + + A +F +P +N+VSWN+M+DGYA+ G I A ++FD MPE++++S
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS 173
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
W+ ++ V++G DEA+ +FE M P+ + V+ +++ A G +D+ R +
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERM----PRRDVVSWTAMVDGLAKNGKVDEARRL----F 225
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF--------A 221
D ++ +++ YA+ I EA +F+ +M D WN+MI GF A
Sbjct: 226 DCMPERNIISWNAMITGYAQNNRIDEADQLFQ--VMPERDFASWNTMITGFIRNREMNKA 283
Query: 222 C------------------HGLV-----KESLDLFSEMHIVG-VKPDEITYLNLLSACAH 257
C G V +E+L++FS+M G VKP+ TY+++LSAC+
Sbjct: 284 CGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 258 -GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ-----FLCQIPIQPT 311
GLV E + K+ + ++++ +++G++ A + +CQ +
Sbjct: 344 LAGLV-EGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 312 ASMLG 316
SM+
Sbjct: 403 NSMIA 407
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 153/323 (47%), Gaps = 26/323 (8%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV-KNLVSWNSMLDGYAKCGDISMARQVFD 100
E D +I Y D+ AR++FD + KN+V+W +M+ GY + +S+A +F
Sbjct: 74 ERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQ 133
Query: 101 LMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
MPE++V+SW+ +IDGY + G D+AL +F+EM P+ N V+ S++ A G +D+
Sbjct: 134 EMPERNVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDE 189
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
+ + + +V T++VD AK G + EA +F M ++ WN+MI G+
Sbjct: 190 AMNLFERMPRRD----VVSWTAMVDGLAKNGKVDEARRLF--DCMPERNIISWNAMITGY 243
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
A + + E+ LF M + D ++ +++ + +A FD + + +
Sbjct: 244 AQNNRIDEADQLFQVMP----ERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVIS-- 297
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQI----PIQPTASMLGALLNGCMNHGKLDLAETVGR 336
+ M+ + EA ++ ++P ++L+ C + L + +
Sbjct: 298 --WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQI-H 354
Query: 337 KLIELEPHQDGRYV--GLSNVYA 357
+LI HQ V L N+Y+
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYS 377
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 120/244 (49%), Gaps = 23/244 (9%)
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
K G I+ AR++FD +PE+DV++W+ +I GY++ GD EA +F+ RV K N VT +
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD--RVDSRK-NVVTWTA 114
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELP-LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
++ L M+ E+P +V +++D YA+ G I +AL +F M
Sbjct: 115 MVSGYLRSKQLSIAEMLFQ-----EMPERNVVSWNTMIDGYAQSGRIDKALELFDE--MP 167
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
++ WNSM+ G + E+++LF M + D +++ ++ A G V EA
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARR 223
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS----MLGALLNGC 322
FDC+ + + + M+ A+ ++ EA Q +P + AS + G + N
Sbjct: 224 LFDCMPERNIIS----WNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNRE 279
Query: 323 MNHG 326
MN
Sbjct: 280 MNKA 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 37/268 (13%)
Query: 1 MLRVG-VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
MLR G V P+ T+ + A + L G IH I+K+ ++ + V+++L++MYS
Sbjct: 321 MLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG 380
Query: 60 DIPNARKVFDG--IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
++ ARK+FD + ++L+SWNSM+ YA
Sbjct: 381 ELIAARKMFDNGLVCQRDLISWNSMIAVYA------------------------------ 410
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLT 176
G EA+ ++ +MR G KP+ VT +++L AC+H G ++KG V D LPL
Sbjct: 411 -HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLR 469
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
T LVD+ + G +++ + + S F + +++ H V + ++ ++
Sbjct: 470 EEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSF-YGAILSACNVHNEVSIAKEVVKKV 528
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEA 264
G D TY+ + + A G +EA
Sbjct: 529 LETG-SDDAGTYVLMSNIYAANGKREEA 555
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/356 (37%), Positives = 215/356 (60%), Gaps = 4/356 (1%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D NS+I Y I +A+ +FD +P +++V+W +M+DGYAK G + A+ +FD
Sbjct: 242 EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQ 301
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDK 160
MP +DV++++ ++ GYV+ + EAL +F +M + S P++ T+V VL A A LG L K
Sbjct: 302 MPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSK 361
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
MH Y+++ + L L +L+DMY+KCG+IQ A+ VF K D WN+MIGG
Sbjct: 362 AIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH--WNAMIGGL 419
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPK 279
A HGL + + D+ ++ + +KPD+IT++ +L+AC+H GLVKE F+ + K+ + P+
Sbjct: 420 AIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPR 479
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
+HY CMVD+++R+G + A + ++P++P + L C +H + + E V + LI
Sbjct: 480 LQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLI 539
Query: 340 ELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRF 395
+ YV LSN+YA F W R +R M+ ++K PG S++E+ G +H F
Sbjct: 540 LQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 595
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 179/364 (49%), Gaps = 56/364 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV D + + KA + L + G+ IHG++ K G SD F+ N LI +Y + +
Sbjct: 109 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLS 168
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ--DVLSWSCLIDGYVRKGD 122
R++FD +P ++ VS+NSM+DGY KCG I AR++FDLMP + +++SW+ +I GY + D
Sbjct: 169 RQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD 228
Query: 123 -YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP-LTLVLR 180
D A +F +M P+ + ++ S++ G + GR+ + + +P +V
Sbjct: 229 GVDIASKLFADM----PEKDLISWNSMID-----GYVKHGRIEDAKGLFDVMPRRDVVTW 279
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM---- 236
+++D YAK G + A +F M DV +NSM+ G+ + E+L++FS+M
Sbjct: 280 ATMIDGYAKLGFVHHAKTLFDQ--MPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKES 337
Query: 237 HIVGVKPDEITYLNLLSACAHGG-----------LVKEAWYFFDCLGK------------ 273
H++ PD+ T + +L A A G +V++ +Y LG
Sbjct: 338 HLL---PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSI 394
Query: 274 -------NGMTPKS-EHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGC 322
G+ KS +H+ M+ +A G A+ L QI ++P +LN C
Sbjct: 395 QHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 454
Query: 323 MNHG 326
+ G
Sbjct: 455 SHSG 458
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 121/307 (39%), Gaps = 58/307 (18%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
IHG + K G + ++ ++ ++S R L +A+C
Sbjct: 24 IHGRLIKTGIIKNSNLTTRIVLAFASSR--------------------RPYLADFARCVF 63
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
F +D W+ +I + D +AL + M +G ++ ++ VL A
Sbjct: 64 HEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKA 123
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF----------- 200
C+ LG + G +H ++ L L L+ L+ +Y KCG + + +F
Sbjct: 124 CSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSY 183
Query: 201 --------RSGL------------MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+ GL M+ ++ WNSMI G+A + +D+ S++
Sbjct: 184 NSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYA---QTSDGVDIASKLFADM 240
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ D I++ +++ G +++A FD + + + +A M+D A+ G V A
Sbjct: 241 PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVT----WATMIDGYAKLGFVHHAK 296
Query: 301 QFLCQIP 307
Q+P
Sbjct: 297 TLFDQMP 303
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 218/366 (59%), Gaps = 4/366 (1%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
S++ Y+ I +A + F+ +P+K +++ N+M+ G+ + G+IS AR+VFDLM ++D
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
+W +I Y RKG EAL +F +M+ G +P+ +++S+L CA L +L GR +H ++
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ + + + + L+ MY KCG + +A VF D+ +WNS+I G+A HGL +E
Sbjct: 358 VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR--FSSKDIIMWNSIISGYASHGLGEE 415
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMV 287
+L +F EM G P+++T + +L+AC++ G ++E F+ + K +TP EHY+C V
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTV 475
Query: 288 DVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG 347
D++ RAGQV +A + + + I+P A++ GALL C H +LDLAE +KL E EP G
Sbjct: 476 DMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAG 535
Query: 348 RYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHD-KSHPSSE 406
YV LS++ A +W +R+ M V K PG S++E+ +H F K+HP
Sbjct: 536 TYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQA 595
Query: 407 QIYMML 412
I MML
Sbjct: 596 MILMML 601
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 138/273 (50%), Gaps = 24/273 (8%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
NS++ Y S AR++FD + +N+VSWN ++ GY K I AR VF+LMPE++V+
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW+ ++ GY+++G EA ++F M P+ NEV+ + G +DK R ++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLY--- 164
Query: 169 IDNELPLT-LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ +P+ +V T+++ + G + EA +F M+ +V W +MI G+ + V
Sbjct: 165 --DMMPVKDVVASTNMIGGLCREGRVDEARLIFDE--MRERNVVTWTTMITGYRQNNRVD 220
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC-- 285
+ LF M + E+++ ++L G +++A FF+ + P AC
Sbjct: 221 VARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEEFFEVM------PMKPVIACNA 270
Query: 286 MVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
M+ G++++A + + + A+ G +
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 28/332 (8%)
Query: 52 IHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWS 111
I S I ARK FD + K + SWNS++ GY G ARQ+FD M E++V+SW+
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID- 170
L+ GY++ EA VFE M P+ N V+ +++ G + + + + +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELM----PERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESL 230
NE+ T++ + D G I +A ++ +M DV +MIGG G V E+
Sbjct: 140 NEVSWTVMFGGLIDD-----GRIDKARKLY--DMMPVKDVVASTNMIGGLCREGRVDEAR 192
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE-HYACMVDV 289
+F EM V +T+ +++ V A F+ M K+E + M+
Sbjct: 193 LIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEV-----MPEKTEVSWTSMLLG 243
Query: 290 MARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIEL-EPHQDGR 348
+G++ +A +F +P++P + A++ G G++ A R++ +L E +
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIA-CNAMIVGFGEVGEISKA----RRVFDLMEDRDNAT 298
Query: 349 YVGLSNVYAIFRRWDKARSMREAMERMGVKKS 380
+ G+ Y +A + M++ GV+ S
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 35/225 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + GV P + + A L + G +H ++ + ++ D +V++ L+ MY +
Sbjct: 322 MQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGE 381
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A+ VFD K+++ WNS++ GYA
Sbjct: 382 LVKAKLVFDRFSSKDIIMWNSIISGYAS-------------------------------H 410
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EAL +F EM SG PN+VT++++L AC++ G L++G + ++++ +T +
Sbjct: 411 GLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFES-MESKFCVTPTVE 469
Query: 181 --TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+ VDM + G + +A+ + S +KP D +W +++G H
Sbjct: 470 HYSCTVDMLGRAGQVDKAMELIESMTIKP-DATVWGALLGACKTH 513
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 208/343 (60%), Gaps = 7/343 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGP 138
N +++ K G+ +A++V +Q+V++W+ +I GYVR Y+EAL + M +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
KPN+ + S L ACA LG L + +H +ID+ + L +L ++LVD+YAKCG I +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF S +K +DV IWN+MI GFA HGL E++ +FSEM V PD IT+L LL+ C+H
Sbjct: 222 VFYS--VKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 259 GLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
GL++E +F + + + PK EHY MVD++ RAG+V EAY+ + +PI+P + +
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGV 377
LL+ + +L E + L + G YV LSN+Y+ ++W+ A+ +RE M + G+
Sbjct: 340 LLSSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Query: 378 KKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+K+ G S++E G +HRF A D SH ++ IY +L ++ + K
Sbjct: 397 RKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTK 439
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
GI + ++S ++++D YAKCGDI +R+VF + DV W+ +I G+ G EA+
Sbjct: 194 SGIELNAILS-SALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIR 252
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPLTLVLRTSL 183
VF EM P+ +T + +L C+H G L++G+ M + I +L ++
Sbjct: 253 VFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY----GAM 308
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
VD+ + G ++EA + S ++P DV IW S++
Sbjct: 309 VDLLGRAGRVKEAYELIESMPIEP-DVVIWRSLLSS 343
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 222/420 (52%), Gaps = 34/420 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ P T + A + + E G +H ++ K G+E F + +L+ MY
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMY----- 367
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AK G ++ AR+ FD + E+DV W+ LI GYV+
Sbjct: 368 --------------------------AKAGCLADARKGFDCLQERDVALWTSLISGYVQN 401
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
D +EAL ++ M+ +G PN+ TM SVL AC+ L L+ G+ +H + I + L + +
Sbjct: 402 SDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG 461
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L MY+KCG++++ VFR K DV WN+MI G + +G E+L+LF EM G
Sbjct: 462 SALSTMYSKCGSLEDGNLVFRRTPNK--DVVSWNAMISGLSHNGQGDEALELFEEMLAEG 519
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
++PD++T++N++SAC+H G V+ W++F+ + G+ PK +HYACMVD+++RAGQ+ EA
Sbjct: 520 MEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA 579
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+F+ I + LL+ C NHGK +L G KL+ L + YV LS +Y
Sbjct: 580 KEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTAL 639
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
R + + M GV K G S++E+ H FV D HP E+ ++ + QM
Sbjct: 640 GRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQM 699
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 106/177 (59%), Gaps = 2/177 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++ Y+KC ++ A ++FD +++ ++WS ++ GY + G+ EA+ +F M +G K
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+E T+V VL AC+ + L++G+ +H +++ L T+LVDMYAK G + +A
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
F ++ DV +W S+I G+ + +E+L L+ M G+ P++ T ++L AC+
Sbjct: 380 FD--CLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 41/299 (13%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ P+ T + KA + L +G H + K D +V SL+ MY
Sbjct: 114 ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMY---------- 163
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
K G + +VF MPE++ +WS ++ GY +G +E
Sbjct: 164 ---------------------CKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 126 ALAVFE---EMRVSGPKPNEV--TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
A+ VF + G + V ++S L A ++G GR +H I N L + L
Sbjct: 203 AIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL---GRQIHCITIKNGLLGFVALS 259
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+LV MY+KC ++ EA +F S + S W++M+ G++ +G E++ LFS M G
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNS--ITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+KP E T + +L+AC+ ++E L K G +VD+ A+AG +A+A
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 141/335 (42%), Gaps = 76/335 (22%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G A+HG I + G + +N L++ Y+ + A +F+ I K++VSWNS++ GY++
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G IS + V L F EMR PN T+ +
Sbjct: 93 NGGISSSYTVMQL----------------------------FREMRAQDILPNAYTLAGI 124
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
A + L + GR H V+ + + TSLV MY K G +++ L VF M
Sbjct: 125 FKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVF--AYMPER 182
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFS---------------------------------E 235
+ + W++M+ G+A G V+E++ +F+ +
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ 242
Query: 236 MHIVGVKPDEITYLNLLSAC----AHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVM 290
+H + +K + ++ L +A + + EA FD G +N +T ++ MV
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSIT-----WSAMVTGY 297
Query: 291 ARAGQVAEAYQFLCQI---PIQPTASMLGALLNGC 322
++ G+ EA + ++ I+P+ + +LN C
Sbjct: 298 SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
P+ T++ L + L GR +H +I + LV+ YAKCG + +A
Sbjct: 11 NPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHS 70
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKES---LDLFSEMHIVGVKPDEITYLNLLSA 254
+F + + K DV WNS+I G++ +G + S + LF EM + P+ T + A
Sbjct: 71 IFNAIICK--DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 221/424 (52%), Gaps = 39/424 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M+ G P T + A C R L G IHGY+ ++ +D +V+ SLI
Sbjct: 300 MIIEGTRPSQTTLTSILMA--CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLI------ 351
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
D Y KCG+ ++A VF + SW+ +I Y+
Sbjct: 352 -------------------------DLYFKCGEANLAETVFSKTQKDVAESWNVMISSYI 386
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
G++ +A+ V+++M G KP+ VT SVL AC+ L AL+KG+ +H + ++ L +
Sbjct: 387 SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 446
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L ++L+DMY+KCG +EA +F S + DV W MI + HG +E+L F EM
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNS--IPKKDVVSWTVMISAYGSHGQPREALYQFDEMQK 504
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVA 297
G+KPD +T L +LSAC H GL+ E FF + K G+ P EHY+CM+D++ RAG++
Sbjct: 505 FGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLL 564
Query: 298 EAYQFLCQIP-IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY 356
EAY+ + Q P A +L L + C H + L + + R L+E P Y+ L N+Y
Sbjct: 565 EAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLY 624
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIV 416
A WD AR +R M+ MG++K PG S++EM + F A D+SH +E +Y L +
Sbjct: 625 ASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLS 684
Query: 417 SQMK 420
M+
Sbjct: 685 GHME 688
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 124/251 (49%), Gaps = 33/251 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD TFP + KA L + LG IH + K+GY D V++SL+ MY+ F N+
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSL-- 162
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
QVFD MPE+DV SW+ +I + + G+ ++AL
Sbjct: 163 -----------------------------QVFDEMPERDVASWNTVISCFYQSGEAEKAL 193
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F M SG +PN V++ + AC+ L L++G+ +H + L + ++LVDMY
Sbjct: 194 ELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMY 253
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
KC ++ A VF+ M + WNSMI G+ G K +++ + M I G +P + T
Sbjct: 254 GKCDCLEVAREVFQK--MPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTT 311
Query: 248 YLNLLSACAHG 258
++L AC+
Sbjct: 312 LTSILMACSRS 322
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 147/309 (47%), Gaps = 33/309 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G P+ ++ A + LL E G IH K G+E D +V+++L+ MY
Sbjct: 203 GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMY--------- 253
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KC + +AR+VF MP + +++W+ +I GYV KGD
Sbjct: 254 ----------------------GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSK 291
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+ + M + G +P++ T+ S+L AC+ L G+ +H YVI + + + + SL+
Sbjct: 292 SCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLI 351
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
D+Y KCG A VF ++ WN MI + G ++++++ +M VGVKPD
Sbjct: 352 DLYFKCGEANLAETVFSKTQKDVAES--WNVMISSYISVGNWFKAVEVYDQMVSVGVKPD 409
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+T+ ++L AC+ +++ + ++ + + ++D+ ++ G EA++
Sbjct: 410 VVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN 469
Query: 305 QIPIQPTAS 313
IP + S
Sbjct: 470 SIPKKDVVS 478
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 4/186 (2%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMP-EQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
+++V S+++ Y C D AR VF+ DV W+ L+ GY + + + L VF+
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 133 M-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
+ S P+ T +V+ A LG GRM+H V+ + +V+ +SLV MYAK
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ +L VF M DV WN++I F G +++L+LF M G +P+ ++
Sbjct: 157 LFENSLQVFDE--MPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVA 214
Query: 252 LSACAH 257
+SAC+
Sbjct: 215 ISACSR 220
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Query: 145 MVSVLCACAH-LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
++S+L C + +L + +++H ++ L +VL SL+++Y C A HVF +
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV-KPDEITYLNLLSACAHGGLVK 262
++ SDV+IWNS++ G++ + + ++L++F + + PD T+ N++ A+G L +
Sbjct: 66 DIR-SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIK--AYGALGR 122
Query: 263 E 263
E
Sbjct: 123 E 123
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 219/367 (59%), Gaps = 5/367 (1%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
S++ Y I +A ++F+ +PVK +++ N+M+ G + G+I+ AR+VFD M E++
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW +I + R G EAL +F M+ G +P T++S+L CA L +L G+ +H +
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ + + + + + L+ MY KCG + ++ +F D+ +WNS+I G+A HGL +E
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR--FPSKDIIMWNSIISGYASHGLGEE 415
Query: 229 SLDLFSEMHIVG-VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACM 286
+L +F EM + G KP+E+T++ LSAC++ G+V+E ++ + G+ P + HYACM
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475
Query: 287 VDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
VD++ RAG+ EA + + + ++P A++ G+LL C H +LD+AE +KLIE+EP
Sbjct: 476 VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENS 535
Query: 347 GRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHD-KSHPSS 405
G Y+ LSN+YA RW +R+ M+ V+KSPG S+ E+ +H F SHP
Sbjct: 536 GTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQ 595
Query: 406 EQIYMML 412
E I +L
Sbjct: 596 ESILKIL 602
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 138/267 (51%), Gaps = 22/267 (8%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
NS++ Y + +ARK+FD +P +N++SWN ++ GY K G+I AR+VFDLMPE++V+
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW+ L+ GYV G D A ++F +M P+ N+V+ +L G +D ++ +
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFLQDGRIDDACKLYEMI 167
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
D + + RTS++ K G + EA +F M V W +M+ G+ + V +
Sbjct: 168 PDKD----NIARTSMIHGLCKEGRVDEAREIFDE--MSERSVITWTTMVTGYGQNNRVDD 221
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC--M 286
+ +F M + E+++ ++L G +++A F+ + P AC M
Sbjct: 222 ARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVM------PVKPVIACNAM 271
Query: 287 VDVMARAGQVAEAYQFLCQIPIQPTAS 313
+ + + G++A+A + + + AS
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDAS 298
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 41/215 (19%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
+ D S+IH + AR++FD + +++++W +M+ GY + + AR++FD+
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE+ +SW+ ++ GYV+ G ++A +FE M V KP + AC
Sbjct: 229 MPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV---KP--------VIAC--------- 268
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+++ + G I +A VF S MK + W ++I
Sbjct: 269 -------------------NAMISGLGQKGEIAKARRVFDS--MKERNDASWQTVIKIHE 307
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+G E+LDLF M GV+P T +++LS CA
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFPTLISILSVCA 342
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + GV P T + A L G +H + + ++ D +V++ L+ MY +
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ++ +FD P K+++ WNS++ GYA
Sbjct: 382 LVKSKLIFDRFPSKDIIMWNSIISGYAS-------------------------------H 410
Query: 121 GDYDEALAVFEEMRVSG-PKPNEVTMVSVLCACAHLGALDKGRMMHHYV--IDNELPLTL 177
G +EAL VF EM +SG KPNEVT V+ L AC++ G +++G ++ + + P+T
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPIT- 469
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+VDM + G EA+ + S ++P D +W S++G AC + + F
Sbjct: 470 AHYACMVDMLGRAGRFNEAMEMIDSMTVEP-DAAVWGSLLG--ACRTHSQLDVAEFCAKK 526
Query: 238 IVGVKPDEITYLNLLS 253
++ ++P+ LLS
Sbjct: 527 LIEIEPENSGTYILLS 542
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 225/416 (54%), Gaps = 5/416 (1%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD F L KA A L + G +H + + Y +D V +SL+ MY+ + +A+ V
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD I VKN +SW +M+ GYAK G A ++F ++P +++ SW+ LI G+V+ G EA
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 128 AVFEEMRVSGPKP-NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
+VF EMR + + + S++ ACA+L A GR +H VI + + +L+DM
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDM 282
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
YAKC + A +F M+ DV W S+I G A HG +++L L+ +M GVKP+E+
Sbjct: 283 YAKCSDVIAAKDIFSR--MRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
T++ L+ AC+H G V++ F + K+ G+ P +HY C++D++ R+G + EA +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD-GRYVGLSNVYAIFRRWDK 364
+P P ALL+ C G+ + + L+ +D Y+ LSN+YA W K
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGK 460
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
R + M V+K PG+S VE+ F A + SHP E I+ +L + +M+
Sbjct: 461 VSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMR 516
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 109/190 (57%), Gaps = 7/190 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP- 138
N++++ Y KCG S A QVFD MP +D ++W+ ++ + + L+VF + S
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
+P++ +++ ACA+LG++D GR +H + I +E V+++SLVDMYAKCG + A
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF S ++ + W +M+ G+A G +E+L+LF I+ VK + ++ L+S
Sbjct: 162 VFDS--IRVKNTISWTAMVSGYAKSGRKEEALELF---RILPVK-NLYSWTALISGFVQS 215
Query: 259 GLVKEAWYFF 268
G EA+ F
Sbjct: 216 GKGLEAFSVF 225
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 251 bits (641), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 230/411 (55%), Gaps = 13/411 (3%)
Query: 20 SACLLKRELGLA--IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV 77
S C L +A +HGY+ K G+E N+LIH+Y + +A +F I K +
Sbjct: 302 SVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIE 361
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQD--------VLSWSCLIDGYVRKGDYDEALAV 129
SWNS++ + G + A +F + E + V++W+ +I G +G D++L
Sbjct: 362 SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEY 421
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
F +M+ S N VT+ +L CA L AL+ GR +H +VI + ++++ +LV+MYAK
Sbjct: 422 FRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAK 481
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
CG + E VF + ++ D+ WNS+I G+ HG +++L +F M G PD I +
Sbjct: 482 CGLLSEGSLVFEA--IRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALV 539
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI 308
+LSAC+H GLV++ F + K G+ P+ EHYAC+VD++ R G + EA + + +P+
Sbjct: 540 AVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPM 599
Query: 309 QPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSM 368
+P +LGALLN C H +D+AE + +L LEP + G Y+ LSN+Y+ RW+++ ++
Sbjct: 600 EPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANV 659
Query: 369 REAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
R ++ +KK G S++E+ ++F + E IY +L +VS M
Sbjct: 660 RALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHM 710
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 147/299 (49%), Gaps = 10/299 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ D P + +A L + L A H + + G + + V N L+ +Y
Sbjct: 149 MRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGR 208
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDG 116
+ +A +F +PV+N +SWN M+ G+++ D A ++F+ M + D ++W+ ++
Sbjct: 209 MGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSC 268
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ + G +++ L F MR+SG + + CA L AL +H YVI
Sbjct: 269 HSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEY 328
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
L R +L+ +Y K G +++A H+FR ++ + WNS+I F G + E+L LFSE+
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQ--IRNKGIESWNSLITSFVDAGKLDEALSLFSEL 386
Query: 237 ----HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMA 291
H+ VK + +T+ +++ C G ++ +F + + + S C++ + A
Sbjct: 387 EEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICA 445
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 8/264 (3%)
Query: 81 SMLDGYAKCGDISMARQVFD---LMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
+++ YA+ G + AR VF+ L+ D+ W+ ++ V G Y+ AL ++ MR G
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
+ + +L AC +LG R H VI L L + L+ +Y K G + +A
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
++F M + WN MI GF+ + ++ +F M KPDE+T+ ++LS +
Sbjct: 214 NLFVE--MPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQ 271
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMA--RAGQVAE-AYQFLCQIPIQPTASM 314
G ++ +F + +G E A V A A +AE + ++ + +
Sbjct: 272 CGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPS 331
Query: 315 LGALLNGCMNHGKLDLAETVGRKL 338
AL++ GK+ AE + R++
Sbjct: 332 RNALIHVYGKQGKVKDAEHLFRQI 355
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 121/262 (46%), Gaps = 38/262 (14%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V + +T + A L LG IHG++ + + V N+L++MY+ +
Sbjct: 430 VLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGS 489
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
VF+ I K+L+SWNS++ GY + G+ K
Sbjct: 490 LVFEAIRDKDLISWNSIIKGYG--------------------------MHGFAEK----- 518
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--TSL 183
AL++F+ M SG P+ + +V+VL AC+H G ++KGR + Y + L +
Sbjct: 519 ALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI-FYSMSKRFGLEPQQEHYACI 577
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
VD+ + G ++EA + ++ M+P V + +++ H V + + S++ + ++P
Sbjct: 578 VDLLGRVGFLKEASEIVKNMPMEP-KVCVLGALLNSCRMHKNVDIAEGIASQLSV--LEP 634
Query: 244 DEI-TYLNLLSACAHGGLVKEA 264
+ +Y+ L + + GG +E+
Sbjct: 635 ERTGSYMLLSNIYSAGGRWEES 656
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Query: 179 LRTSLVDMYAKCGAIQEALHVFRS-GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
L +L+ +YA+ G + +A +VF + L+ SD+ +WNS++ HGL + +L+L+ M
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
G+ D +L AC + G F + + G+ ++ + +AG++
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMG 210
Query: 298 EAYQFLCQIPIQPTAS 313
+AY ++P++ S
Sbjct: 211 DAYNLFVEMPVRNRMS 226
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 251 bits (641), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 217/397 (54%), Gaps = 38/397 (9%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
GL IHG I G+ SD + +L+ +YS+ + +A KVFD IP ++ VSWN +
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVL------ 185
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR--VSG-PKPNEVTM 145
+SC Y+R + L +F++M+ V G KP+ VT
Sbjct: 186 ---------------------FSC----YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTC 220
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+ L ACA+LGALD G+ +H ++ +N L L L +LV MY++CG++ +A VF M
Sbjct: 221 LLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYG--M 278
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+ +V W ++I G A +G KE+++ F+EM G+ P+E T LLSAC+H GLV E
Sbjct: 279 RERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGM 338
Query: 266 YFFDCL--GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCM 323
FFD + G+ + P HY C+VD++ RA + +AY + + ++P +++ LL C
Sbjct: 339 MFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACR 398
Query: 324 NHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGY 383
HG ++L E V LIEL+ + G YV L N Y+ +W+K +R M+ + PG
Sbjct: 399 VHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGC 458
Query: 384 SFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
S +E+ G +H F+ D SHP E+IY ML I Q+K
Sbjct: 459 SAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLK 495
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 36/242 (14%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD +T +A A L + G +H +I + G +SN+L+ MYS + A
Sbjct: 213 VKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAY 272
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+VF G+ +N+VSW +++ G A ++G+ + E
Sbjct: 273 QVFYGMRERNVVSWTALISGLA--------------------------MNGFGK-----E 301
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--TSL 183
A+ F EM G P E T+ +L AC+H G + +G M + E + L +
Sbjct: 302 AIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCV 361
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
VD+ + + +A + +S MKP D IW +++G HG V+ + S H++ +K
Sbjct: 362 VDLLGRARLLDKAYSLIKSMEMKP-DSTIWRTLLGACRVHGDVELGERVIS--HLIELKA 418
Query: 244 DE 245
+E
Sbjct: 419 EE 420
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 153/504 (30%), Positives = 247/504 (49%), Gaps = 76/504 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
G++ D T+ L K C+ R + G I ++ G+ F+ N LI+MY F +
Sbjct: 56 GLWADSATYSELIKC--CISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLN 113
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLM-------------------- 102
+A ++FD +P +N++SW +M+ Y+KC A ++ LM
Sbjct: 114 DAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN 173
Query: 103 ----------------PEQDVLSWSCLIDGYVRKGDYDEALAVFEE-------------- 132
E DV S LID + + G+ ++AL+VF+E
Sbjct: 174 GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIG 233
Query: 133 -----------------MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
M+ +G + T+ SVL AC L L+ G H +++ +
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQD- 292
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
L+L +LVDMY KCG++++AL VF MK DV W++MI G A +G +E+L LF
Sbjct: 293 -LILNNALVDMYCKCGSLEDALRVFNQ--MKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAG 294
M G KP+ IT + +L AC+H GL+++ WY+F + K G+ P EHY CM+D++ +AG
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
++ +A + L ++ +P A LL C + LAE +K+I L+P G Y LSN
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
Query: 355 VYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGF 414
+YA ++WD +R M G+KK PG S++E++ +H F+ D SHP ++ L
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQ 529
Query: 415 IVSQMKHIVDYENQEYYFYDNEGK 438
++ ++ I + D EG+
Sbjct: 530 LIHRLTGIGYVPETNFVLQDLEGE 553
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 227/450 (50%), Gaps = 65/450 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY----- 55
MLR G PD+ TFP++ KA + L + G +HG++ K G+E + +VS L+HMY
Sbjct: 98 MLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGE 157
Query: 56 -----SSFRDIP---------------NARKVFDGIP---------VK------------ 74
F DIP N + D I VK
Sbjct: 158 VNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVA 217
Query: 75 ---------------NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
N++ S++D YAKCGD+ AR +FD MPE+ ++SW+ +I GY +
Sbjct: 218 CGRCFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQ 277
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
GD +EAL +F +M G P++VT +SV+ A G G+ +H YV +
Sbjct: 278 NGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI 337
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+LV+MYAK G + A F ++ D W +I G A HG E+L +F M
Sbjct: 338 VCALVNMYAKTGDAESAKKAFED--LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEK 395
Query: 240 G-VKPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
G PD ITYL +L AC+H GLV+E YF + +G+ P EHY CMVD+++RAG+
Sbjct: 396 GNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFE 455
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EA + + +P++P ++ GALLNGC H L+L + + + E E G YV LSN+YA
Sbjct: 456 EAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYA 515
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVE 387
RW + +RE+M+ V K G+S VE
Sbjct: 516 KAGRWADVKLIRESMKSKRVDKVLGHSSVE 545
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 152/357 (42%), Gaps = 48/357 (13%)
Query: 73 VKNLVSWNSMLDGYAKCGD---ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
++N++ + ++D C + +S AR VF+ + V W+ +I GY + D+AL
Sbjct: 35 IRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIF 94
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
++EM G P+ T VL AC+ L + G +H +V+ + + + T L+ MY
Sbjct: 95 YQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMC 154
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
CG + L VF + +V W S+I GF + ++++ F EM GVK +E +
Sbjct: 155 CGEVNYGLRVFED--IPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMV 212
Query: 250 NLLSAC--------------------------AHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
+LL AC A G ++ A Y FD GM ++
Sbjct: 213 DLLVACGRCFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFD-----GMPERT--L 265
Query: 284 ACMVDVMARAGQVAEAYQFLC------QIPIQPTASMLGALLNGCMNHGKLDLAETVGRK 337
++ Q +A + LC + I P +++ M G L +++
Sbjct: 266 VSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAY 325
Query: 338 LIELEPHQDGRYV-GLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALH 393
+ + +D V L N+YA + A S ++A E + K + ++ V + A H
Sbjct: 326 VSKTGFVKDAAIVCALVNMYA---KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 379
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 217/383 (56%), Gaps = 11/383 (2%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D F K+ A + LG ++H + K+ + S+ FV +L+ MY + +ARK+F
Sbjct: 47 DAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLF 106
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVF---DLMPEQDVLSWSCLIDGYV--RKGDY 123
D IP +N V WN+M+ Y CG + A +++ D+MP + S++ +I G V G Y
Sbjct: 107 DEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES--SFNAIIKGLVGTEDGSY 164
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
A+ + +M KPN +T+++++ AC+ +GA + +H Y N + L++ L
Sbjct: 165 -RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGL 223
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
V+ Y +CG+I VF S M+ DV W+S+I +A HG + +L F EM + V P
Sbjct: 224 VEAYGRCGSIVYVQLVFDS--MEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTP 281
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
D+I +LN+L AC+H GL EA +F + G G+ +HY+C+VDV++R G+ EAY+
Sbjct: 282 DDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKV 341
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRW 362
+ +P +PTA GALL C N+G+++LAE R+L+ +EP YV L +Y R
Sbjct: 342 IQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQ 401
Query: 363 DKARSMREAMERMGVKKSPGYSF 385
++A +R M+ GVK SPG S+
Sbjct: 402 EEAERLRLKMKESGVKVSPGSSW 424
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 223/394 (56%), Gaps = 9/394 (2%)
Query: 50 SLIHMYSSFRDIPNARKV-----FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
SL + S DI R V G ++++ N+++ YAK G + AR VF+ +P
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 105 QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRM 163
DV+SW+ +I GY + G EA+ ++ M G N+ T VSVL AC+ GAL +G
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+H ++ N L L + + TSL DMY KCG +++AL +F + + WN++I H
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQ--IPRVNSVPWNTLIACHGFH 530
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEH 282
G ++++ LF EM GVKPD IT++ LLSAC+H GLV E + F+ + + G+TP +H
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 283 YACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
Y CMVD+ RAGQ+ A +F+ + +QP AS+ GALL+ C HG +DL + L E+E
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650
Query: 343 PHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSH 402
P G +V LSN+YA +W+ +R G++K+PG+S +E+ + F +++H
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 710
Query: 403 PSSEQIYMMLGFIVSQMKHIVDYENQEYYFYDNE 436
P E++Y L + +++K I + + D E
Sbjct: 711 PMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVE 744
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 133/280 (47%), Gaps = 51/280 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ PD+ TFP + KA ++ G IH K G+ D +V+ SLIH+YS ++
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ NAR +F D MP +D+ SW+ +I GY +
Sbjct: 201 VGNARILF-------------------------------DEMPVRDMGSWNAMISGYCQS 229
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ EAL + +R + VT+VS+L AC G ++G +H Y I + L L +
Sbjct: 230 GNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS 285
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
L+D+YA+ G +++ VF M D+ WNS+I + + ++ LF EM +
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDR--MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 241 VKPDEITYLNLLS---------AC--AHGGLVKEAWYFFD 269
++PD +T ++L S AC G +++ W+ D
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 10/188 (5%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
++N+ +++ Y G++++AR FD + +DV +W+ +I GY R G+ E + F
Sbjct: 83 IQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSL 142
Query: 133 -MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
M SG P+ T SVL AC + G +H + + + SL+ +Y++
Sbjct: 143 FMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYK 199
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
A+ A +F M D+ WN+MI G+ G KE+L L + + + D +T ++L
Sbjct: 200 AVGNARILFDE--MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSL 253
Query: 252 LSACAHGG 259
LSAC G
Sbjct: 254 LSACTEAG 261
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/439 (32%), Positives = 229/439 (52%), Gaps = 36/439 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +GV PD T+PF+ KA + L G A+H ++ K G+ V+ L+ MY F
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKF-- 157
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
G++S A +F+ M +D+++W+ + V+
Sbjct: 158 -----------------------------GELSSAEFLFESMQVKDLVAWNAFLAVCVQT 188
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ AL F +M + + T+VS+L AC LG+L+ G ++ E+ +++
Sbjct: 189 GNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVE 248
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+ +DM+ KCG + A +F MK +V W++MI G+A +G +E+L LF+ M G
Sbjct: 249 NARLDMHLKCGNTEAARVLFEE--MKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG 306
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL---GKNGMTPKSEHYACMVDVMARAGQVA 297
++P+ +T+L +LSAC+H GLV E +F + + P+ EHYACMVD++ R+G +
Sbjct: 307 LRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLE 366
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EAY+F+ ++P++P + GALL C H + L + V L+E P +V LSN+YA
Sbjct: 367 EAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYA 426
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
+WD +R M ++G KK YS VE G +H F DKSHP S+ IY L I+
Sbjct: 427 AAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILK 486
Query: 418 QMKHIVDYENQEYYFYDNE 436
+++ + + F+D E
Sbjct: 487 KIRKMGYVPDTCSVFHDVE 505
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+L+ GD+ ARQVFD M + + W+ L GYVR E+L ++++MR G +
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+E T V+ A + LG G +H +V+ ++ T LV MY K G + A +
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFL 166
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F S M+ D+ WN+ + G +L+ F++M V+ D T +++LSAC G
Sbjct: 167 FES--MQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLG 224
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/426 (33%), Positives = 238/426 (55%), Gaps = 37/426 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + PD T A LG IHG++ + SD FV NSLI M
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDM------ 448
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
Y+K G + A VF+ + + V++W+ ++ G+ +
Sbjct: 449 -------------------------YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ EA+++F+ M S + NEVT ++V+ AC+ +G+L+KG+ +HH +I + L L
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTD 542
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+DMYAKCG + A VFR+ M + W+SMI + HG + ++ F++M G
Sbjct: 543 TALIDMYAKCGDLNAAETVFRA--MSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESG 600
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
KP+E+ ++N+LSAC H G V+E Y+F+ + G++P SEH+AC +D+++R+G + EAY
Sbjct: 601 TKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAY 660
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ + ++P AS+ G+L+NGC H K+D+ + + L ++ G Y LSN+YA
Sbjct: 661 RTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEG 720
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI--VSQ 418
W++ R +R AM+ +KK PGYS +E+ + RF A +++ +++IY LG + ++
Sbjct: 721 EWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTN 780
Query: 419 MKHIVD 424
+H+VD
Sbjct: 781 EEHVVD 786
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 154/315 (48%), Gaps = 51/315 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV PD +T + + A L + ++HG IT+ ++ D + NSL+ MYS D
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGD 252
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ++ ++F+ I KN VSW +M+ Y +
Sbjct: 253 LLSSERIFEKIAKKNAVSWTAMISSY--------------------------------NR 280
Query: 121 GDYDE-ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL-PLTLV 178
G++ E AL F EM SG +PN VT+ SVL +C +G + +G+ +H + + EL P
Sbjct: 281 GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES 340
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L +LV++YA+CG + + V R ++ ++ WNS+I +A G+V ++L LF +M
Sbjct: 341 LSLALVELYAECGKLSDCETVLR--VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT 398
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-----GMTPKSEHYA--CMVDVMA 291
+KPD T + +SAC + GLV LGK T S+ + ++D+ +
Sbjct: 399 QRIKPDAFTLASSISACENAGLVP--------LGKQIHGHVIRTDVSDEFVQNSLIDMYS 450
Query: 292 RAGQVAEAYQFLCQI 306
++G V A QI
Sbjct: 451 KSGSVDSASTVFNQI 465
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 138/295 (46%), Gaps = 37/295 (12%)
Query: 13 FPFLAKASACLLKRE---LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFD 69
F F + AC RE +G +HG I K G + D + SL+ MY
Sbjct: 101 FVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY-------------- 146
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
+ G++S A +VFD MP +D+++WS L+ + G+ +AL +
Sbjct: 147 -----------------GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRM 189
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
F+ M G +P+ VTM+SV+ CA LG L R +H + L L SL+ MY+K
Sbjct: 190 FKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSK 249
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
CG + + +F + + W +MI + +++L FSEM G++P+ +T
Sbjct: 250 CGDLLSSERIFEK--IAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA-CMVDVMARAGQVAEAYQFL 303
++LS+C GL++E + + P E + +V++ A G++++ L
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL 362
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 141/260 (54%), Gaps = 5/260 (1%)
Query: 81 SMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
++++ YA+CG +S V ++ ++++++W+ LI Y +G +AL +F +M KP
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP 403
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
+ T+ S + AC + G + G+ +H +VI ++ V + SL+DMY+K G++ A VF
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFV-QNSLIDMYSKSGSVDSASTVF 462
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
+K V WNSM+ GF+ +G E++ LF M+ ++ +E+T+L ++ AC+ G
Sbjct: 463 NQ--IKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGS 520
Query: 261 VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLN 320
+++ + L +G+ A ++D+ A+ G + A + + + + +++N
Sbjct: 521 LEKGKWVHHKLIISGLKDLFTDTA-LIDMYAKCGDL-NAAETVFRAMSSRSIVSWSSMIN 578
Query: 321 GCMNHGKLDLAETVGRKLIE 340
HG++ A + +++E
Sbjct: 579 AYGMHGRIGSAISTFNQMVE 598
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
D +PV L+ + YA G +R VF+ P D + LI V D A+
Sbjct: 33 DPLPVTKLI------ESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAID 86
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACA----HLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
++ + + ++ SVL ACA HL G +H +I + V+ TSL+
Sbjct: 87 LYHRLVSETTQISKFVFPSVLRACAGSREHLSV---GGKVHGRIIKGGVDDDAVIETSLL 143
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MY + G + +A VF M D+ W++++ +G V ++L +F M GV+PD
Sbjct: 144 CMYGQTGNLSDAEKVFDG--MPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPD 201
Query: 245 EITYLNLLSACAHGGLVKEA 264
+T ++++ CA G ++ A
Sbjct: 202 AVTMISVVEGCAELGCLRIA 221
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 214/390 (54%), Gaps = 35/390 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGY-ITKAGYESDRFVSNSLIHMYSSFR 59
M G+ D LT L KA + ++G +HG I ++ + ++ S+I MY R
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCR 260
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ NARK+F+ +N+V W +++ G+AKC A + FDL
Sbjct: 261 LLDNARKLFETSVDRNVVMWTTLISGFAKC---ERAVEAFDL------------------ 299
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
F +M PN+ T+ ++L +C+ LG+L G+ +H Y+I N + + V
Sbjct: 300 ----------FRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVN 349
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
TS +DMYA+CG IQ A VF +M +V W+SMI F +GL +E+LD F +M
Sbjct: 350 FTSFIDMYARCGNIQMARTVF--DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQ 407
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
V P+ +T+++LLSAC+H G VKE W F+ + ++ G+ P+ EHYACMVD++ RAG++ E
Sbjct: 408 NVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGE 467
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A F+ +P++P AS GALL+ C H ++DLA + KL+ +EP + YV LSN+YA
Sbjct: 468 AKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYAD 527
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEM 388
W+ +R M G +K G S E+
Sbjct: 528 AGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D F KA L E G+ IHG K G + D +V+ SL+ MY
Sbjct: 108 DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMY------------- 154
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
A+ G + A++VFD +P ++ + W L+ GY++ E
Sbjct: 155 ------------------AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFR 196
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRTSLVDMY 187
+F MR +G + +T++ ++ AC ++ A G+ +H I + + L+ S++DMY
Sbjct: 197 LFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMY 256
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
KC + A +F + + + +V +W ++I GFA E+ DLF +M + P++ T
Sbjct: 257 VKCRLLDNARKLFETSVDR--NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCT 314
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+L +C+ G ++ + +NG+ + ++ +D+ AR G + A +P
Sbjct: 315 LAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP 374
Query: 308 ---IQPTASMLGAL-LNG 321
+ +SM+ A +NG
Sbjct: 375 ERNVISWSSMINAFGING 392
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV--KNLVSWNSMLDGYAKC 89
+H + G+E + + +SL + Y + A F+ IP +N SWN++L GY+K
Sbjct: 26 VHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSK- 84
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
S +C Y + L ++ MR + +V +
Sbjct: 85 -------------------SKTCC---------YSDVLLLYNRMRRHCDGVDSFNLVFAI 116
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
AC LG L+ G ++H + N L + SLV+MYA+ G ++ A VF ++ S
Sbjct: 117 KACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS- 175
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+W ++ G+ + E LF M G+ D +T + L+ AC +
Sbjct: 176 -VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN 222
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/436 (31%), Positives = 224/436 (51%), Gaps = 39/436 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV P+ T+ + A + E +H + K YE V +L
Sbjct: 388 MKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTAL--------- 434
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD Y K G + A +VF + ++D+++WS ++ GY +
Sbjct: 435 ----------------------LDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGA-LDKGRMMHHYVIDNELPLTLVL 179
G+ + A+ +F E+ G KPNE T S+L CA A + +G+ H + I + L +L +
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++L+ MYAK G I+ A VF+ + D+ WNSMI G+A HG ++LD+F EM
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKR--QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
VK D +T++ + +AC H GLV+E +FD + ++ + P EH +CMVD+ +RAGQ+ +
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + + +P +++ +L C H K +L K+I ++P YV LSN+YA
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 710
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
W + +R+ M VKK PGYS++E+ + F+A D+SHP +QIYM L + ++
Sbjct: 711 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTR 770
Query: 419 MKHIVDYENQEYYFYD 434
+K + + Y D
Sbjct: 771 LKDLGYEPDTSYVLQD 786
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 33/255 (12%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R+G+ D F + K SA L G +H K G+ D V SL+
Sbjct: 86 RLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLV---------- 135
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
D Y K + R+VFD M E++V++W+ LI GY R
Sbjct: 136 ---------------------DTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSM 174
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
DE L +F M+ G +PN T + L A G +G +H V+ N L T+ + S
Sbjct: 175 NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNS 234
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+++Y KCG +++A +F +K V WNSMI G+A +GL E+L +F M + V+
Sbjct: 235 LINLYLKCGNVRKARILFDKTEVKS--VVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 243 PDEITYLNLLSACAH 257
E ++ +++ CA+
Sbjct: 293 LSESSFASVIKLCAN 307
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 152/342 (44%), Gaps = 59/342 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRE----LGLAIHGYITKAGYESDRFVSNSLIHMYS 56
M G P+ TF A+ +L E GL +H + K G + VSNSLI++
Sbjct: 185 MQNEGTQPNSFTFA----AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINL-- 238
Query: 57 SFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
Y KCG++ AR +FD + V++W+ +I G
Sbjct: 239 -----------------------------YLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
Y G EAL +F MR++ + +E + SV+ CA+L L +H V+
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+RT+L+ Y+KC A+ +AL +F+ + +V W +MI GF + +E++DLFSEM
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKE-IGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 237 HIVGVKPDEITYLNLLSAC-------AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
GV+P+E TY +L+A H +VK + +G ++D
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG-----------TALLDA 437
Query: 290 MARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+ G+V EA + I + + A+L G G+ + A
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAW-SAMLAGYAQTGETEAA 478
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 4/236 (1%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A +FD P +D S+ L+ G+ R G EA +F + G + + SVL A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
L GR +H I + + TSLVD Y K ++ VF MK +V W
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE--MKERNVVTWT 163
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
++I G+A + + E L LF M G +P+ T+ L A G+ + KN
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDL 330
G+ ++++ + G V +A + ++ + ++++G +G LDL
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTW-NSMISGYAANG-LDL 277
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 228/420 (54%), Gaps = 33/420 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + PD P K+ A L + ++G ++H K GY++D FV +SL+ MY+ +
Sbjct: 107 MMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGE 166
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I ARK+FD +P +N+V+W+ M+ GYA+
Sbjct: 167 IVYARKMFDEMPQRNVVTWSGMMYGYAQM------------------------------- 195
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ +EAL +F+E N+ + SV+ CA+ L+ GR +H I + + +
Sbjct: 196 GENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 255
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+SLV +Y+KCG + A VF +K ++ IWN+M+ +A H ++ ++LF M + G
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVK--NLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+KP+ IT+LN+L+AC+H GLV E Y+FD + ++ + P +HYA +VD++ RAG++ EA
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEAL 373
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ + +PI PT S+ GALL C H +LA K+ EL P G ++ LSN YA
Sbjct: 374 EVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADG 433
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
R++ A R+ + G KK G S+VE +H F A ++ H S++IY L + +M+
Sbjct: 434 RFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEME 493
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 234/432 (54%), Gaps = 40/432 (9%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF------------- 58
T + KA ++ G IHG +++ E D F+ NSL+ MYS
Sbjct: 277 TLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVM 336
Query: 59 ------------------RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFD 100
+ I A ++F+ +P K++VSW M+ G++ G+IS ++F
Sbjct: 337 KNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFG 396
Query: 101 LMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+MPE+D ++W+ +I +V G Y+EAL F +M PN T SVL A A L L +
Sbjct: 397 MMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIE 456
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G +H V+ + L ++ SLV MY KCG +A +F S + +P ++ +N+MI G+
Sbjct: 457 GLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF-SCISEP-NIVSYNTMISGY 514
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPK 279
+ +G K++L LFS + G +P+ +T+L LLSAC H G V W +F + + + P
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPG 574
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
+HYACMVD++ R+G + +A + +P +P + + G+LL+ H ++DLAE +KLI
Sbjct: 575 PDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLI 634
Query: 340 ELEPHQDGRYVGLSNVYAIF---RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFV 396
ELEP YV LS +Y+I R D+ +++++ +KK PG S++ + G +H F+
Sbjct: 635 ELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKR---IKKDPGSSWIILKGEVHNFL 691
Query: 397 AHDKSHPSSEQI 408
A D+S + E+I
Sbjct: 692 AGDESQLNLEEI 703
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 133/286 (46%), Gaps = 30/286 (10%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP 103
D SN L+ Y A +VF G+ VK +VS +SM+ GY K G I AR +FD M
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 104 EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGR 162
E++V++W+ +IDGY + G +++ +F MR G K N T+ + AC +G
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 163 MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC 222
+H V L L L SL+ MY+K G + EA VF G+MK D WNS+I G
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF--GVMKNKDSVSWNSLITGLVQ 353
Query: 223 HGLVKESLDLFSEM-------------------------HIVGVKP--DEITYLNLLSAC 255
+ E+ +LF +M + G+ P D IT+ ++SA
Sbjct: 354 RKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
G +EA +F + + + P S ++ ++ A + E Q
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQ 459
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 43/258 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ V P+ TF + A+A L GL IHG + K +D V NSL+ MY +
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGN 488
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+A K+F I N+VS+N+M+ GY+ +G+ +K
Sbjct: 489 TNDAYKIFSCISEPNIVSYNTMISGYS--------------------------YNGFGKK 522
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPL 175
AL +F + SG +PN VT +++L AC H+G +D G M Y I+
Sbjct: 523 -----ALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPD- 576
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
+VD+ + G + +A ++ + KP +W S++ H ++ L +
Sbjct: 577 ---HYACMVDLLGRSGLLDDASNLISTMPCKPHS-GVWGSLLSASKTH--LRVDLAELAA 630
Query: 236 MHIVGVKPDEITYLNLLS 253
++ ++PD T +LS
Sbjct: 631 KKLIELEPDSATPYVVLS 648
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 46 FVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
F NS I ++ ++ A +F + +++VSW +M+ YA+ G +S A QVFD MP +
Sbjct: 51 FQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVR 110
Query: 106 DVLSWSCLIDGYVR-KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM 164
S++ +I ++ K D +A +F ++ P+ N V+ +++ G D+ +
Sbjct: 111 VTTSYNAMITAMIKNKCDLGKAYELFCDI----PEKNAVSYATMITGFVRAGRFDEAEFL 166
Query: 165 HHYVIDNELPLTL---VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ E P+ V L+ Y + G EA+ VF+ M +V +SM+ G+
Sbjct: 167 YA-----ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQG--MAVKEVVSCSSMVHGYC 219
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
G + ++ LF M + + IT+ ++ G ++ + F
Sbjct: 220 KMGRIVDARSLFDRM----TERNVITWTAMIDGYFKAGFFEDGFGLF 262
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 207/375 (55%), Gaps = 9/375 (2%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF-D 100
E + N++I Y D+ A F PV+ +V+W +M+ GY K + +A +F D
Sbjct: 97 EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKD 156
Query: 101 LMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+ +++++W+ +I GYV ++ L +F M G +PN + S L C+ L AL
Sbjct: 157 MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL 216
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
GR +H V + L + TSL+ MY KCG + +A +F +MK DV WN+MI G+
Sbjct: 217 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFE--VMKKKDVVAWNAMISGY 274
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPK 279
A HG ++L LF EM ++PD IT++ +L AC H GLV +F+ + ++ + P+
Sbjct: 275 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ 334
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
+HY CMVD++ RAG++ EA + + +P +P A++ G LL C H ++LAE KL+
Sbjct: 335 PDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLL 394
Query: 340 ELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGV-----KKSPGYSFVEMHGALHR 394
+L YV L+N+YA RW+ +R+ M+ V K PGYS++E+ +H
Sbjct: 395 QLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVERVKVPGYSWIEIRNKVHH 454
Query: 395 FVAHDKSHPSSEQIY 409
F + D+ HP + I+
Sbjct: 455 FRSSDRIHPELDSIH 469
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 132/299 (44%), Gaps = 41/299 (13%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D F N ++ Y + A+ FD +P K+ SWN+M+ GYA+ G++ AR++F
Sbjct: 35 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 94
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
M E++ +SW+ +I GY+ GD ++A F+ V G
Sbjct: 95 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG------------------------ 130
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+V T+++ Y K ++ A +F+ + ++ WN+MI G+
Sbjct: 131 ---------------VVAWTAMITGYMKAKKVELAEAMFKD-MTVNKNLVTWNAMISGYV 174
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE 281
+ ++ L LF M G++P+ + L C+ ++ + K+ +
Sbjct: 175 ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVT 234
Query: 282 HYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
++ + + G++ +A++ L ++ + A+++G HG D A + R++I+
Sbjct: 235 ALTSLISMYCKCGELGDAWK-LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMID 292
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ P+ + L +LG IH ++K+ +D SLI MY +
Sbjct: 189 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 248
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A K+F+ + K++V+WN+M+ GYA+
Sbjct: 249 LGDAWKLFEVMKKKDVVAWNAMISGYAQ-------------------------------H 277
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRM-MHHYVIDNELPLTLVL 179
G+ D+AL +F EM + +P+ +T V+VL AC H G ++ G V D ++
Sbjct: 278 GNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH 337
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
T +VD+ + G ++EAL + RS +P ++ +++G H V+
Sbjct: 338 YTCMVDLLGRAGKLEEALKLIRSMPFRPHAA-VFGTLLGACRVHKNVE 384
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 248 bits (632), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 228/389 (58%), Gaps = 3/389 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR G+ P + L ASA + GL +HG I K G++ F+ ++IH Y+ D
Sbjct: 550 MLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 609
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A + F+ ++ S N+++ G+ K G + AR+VFD ++D+ SW+ +I GY +
Sbjct: 610 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQS 669
Query: 121 GDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
AL +F EM S KP+ +TMVSV A + LG+L++G+ H Y+ + +P L
Sbjct: 670 LSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNL 729
Query: 180 RTSLVDMYAKCGAIQEALHVF-RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+++DMYAKCG+I+ AL++F ++ + S + WN++I G A HG K +LDL+S++
Sbjct: 730 TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQS 789
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVA 297
+ +KP+ IT++ +LSAC H GLV+ +F+ + + G+ P +HY CMVD++ +AG++
Sbjct: 790 LPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLE 849
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EA + + ++P++ + G LL+ HG +++AE +L ++P G V LSNVYA
Sbjct: 850 EAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYA 909
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFV 386
RW+ +RE M V+ S +S V
Sbjct: 910 DAGRWEDVALVREEMRTRDVEWSRAFSGV 938
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 162/328 (49%), Gaps = 36/328 (10%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQ 97
K E FVS +L+HMY + +ARK+FD +P +NLV+WN ML+GY+K G I A +
Sbjct: 455 KLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEE 514
Query: 98 VFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGA 157
+FD + E+D++SW +IDG +RK DEAL + EM G KP+EV MV +L A A
Sbjct: 515 LFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVG 574
Query: 158 LDKG--------------------RMMHHYVIDNELPLTL-----------VLRTSLVDM 186
KG ++H Y + N++ L L R +L+
Sbjct: 575 SSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAG 634
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDE 245
+ K G +++A VF K D+F WN+MI G+A + +L LF EM VKPD
Sbjct: 635 FVKNGMVEQAREVFDQTHDK--DIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDA 692
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
IT +++ SA + G ++E D L + + P A ++D+ A+ G + A Q
Sbjct: 693 ITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQ 752
Query: 306 IP--IQPTASMLGALLNGCMNHGKLDLA 331
T S A++ G HG LA
Sbjct: 753 TKNISSSTISPWNAIICGSATHGHAKLA 780
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 149/267 (55%), Gaps = 9/267 (3%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IH + K+G +S+ ++ NS+++MY+ R + +A VF + S+N M+DGY +
Sbjct: 314 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 373
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
+ A ++FD+MPE+ +S++ LI GY + + EA+ +F EMR G NEVT+ +V
Sbjct: 374 SRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATV 433
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ AC+HLG + RM+ I +L + + T+L+ MY C +++A +F M
Sbjct: 434 ISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDE--MPER 491
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
++ WN M+ G++ GL++++ +LF ++ + D +++ ++ C + EA ++
Sbjct: 492 NLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDGCLRKNQLDEALVYY 547
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQ 295
+ + GM P MVD+++ + +
Sbjct: 548 TEMLRCGMKPSE---VMMVDLLSASAR 571
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 69/255 (27%)
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
E +VS L +CA + GR +H V+ + L + S+++MYAKC + +A VF
Sbjct: 294 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 353
Query: 201 RSGLMKPSDVF------------IWN-----------------SMIGGFACHGLVKESLD 231
R S F +W+ ++I G+A + E+++
Sbjct: 354 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 413
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAH-GGL------------------------------ 260
LF EM +G+ +E+T ++SAC+H GG+
Sbjct: 414 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYC 473
Query: 261 ----VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
+K+A FD + + + + M++ ++AG + +A + QI + S G
Sbjct: 474 LCLCLKDARKLFDEMPERNLVT----WNVMLNGYSKAGLIEQAEELFDQITEKDIVSW-G 528
Query: 317 ALLNGCMNHGKLDLA 331
+++GC+ +LD A
Sbjct: 529 TMIDGCLRKNQLDEA 543
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 245 bits (625), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 231/417 (55%), Gaps = 33/417 (7%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ P LTF L +ASA L L IHG + K G D F ++LI
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALI------------- 496
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
D Y+ C + +R VFD M +D++ W+ + GYV++ + +E
Sbjct: 497 ------------------DVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEE 538
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL +F E+++S +P+E T +++ A +L ++ G+ H ++ L + +L+D
Sbjct: 539 ALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLD 598
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MYAKCG+ ++A F S + DV WNS+I +A HG K++L + +M G++P+
Sbjct: 599 MYAKCGSPEDAHKAFDSAASR--DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNY 656
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
IT++ +LSAC+H GLV++ F+ + + G+ P++EHY CMV ++ RAG++ +A + + +
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKA 365
+P +P A + +LL+GC G ++LAE I +P G + LSN+YA W +A
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEA 776
Query: 366 RSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
+ +RE M+ GV K PG S++ ++ +H F++ DKSH + QIY +L ++ Q++ +
Sbjct: 777 KKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGV 833
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 147/304 (48%), Gaps = 36/304 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ PD + + A L G +H Y KA +D +V+NSLI M
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDM------ 394
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
YAKC ++ AR+VFD+ DV+ ++ +I+GY R
Sbjct: 395 -------------------------YAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 121 G---DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
G + EAL +F +MR +P+ +T VS+L A A L +L + +H + L L +
Sbjct: 430 GTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDI 489
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
++L+D+Y+ C ++++ VF MK D+ IWNSM G+ +E+L+LF E+
Sbjct: 490 FAGSALIDVYSNCYCLKDSRLVFDE--MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+ +PDE T+ N+++A + V+ F L K G+ ++D+ A+ G
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 298 EAYQ 301
+A++
Sbjct: 608 DAHK 611
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 124/259 (47%), Gaps = 36/259 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
++ V PD + A + L E G IH +I + G E D + N LI
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI-------- 291
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
D Y KCG + A ++F+ MP ++++SW+ L+ GY +
Sbjct: 292 -----------------------DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ EA+ +F M G KP+ S+L +CA L AL G +H Y I L +
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL---VKESLDLFSEMH 237
SL+DMYAKC + +A VF + +DV ++N+MI G++ G + E+L++F +M
Sbjct: 389 NSLIDMYAKCDCLTDARKVF--DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 238 IVGVKPDEITYLNLLSACA 256
++P +T+++LL A A
Sbjct: 447 FRLIRPSLLTFVSLLRASA 465
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++D Y K G+I AR VFD +PE+ ++W+ +I G V+ G +L +F ++ P+
Sbjct: 189 LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPD 248
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
+ +VL AC+ L L+ G+ +H +++ L + L L+D Y KCG + A +F
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
M ++ W +++ G+ + L KE+++LF+ M G+KPD ++L++CA
Sbjct: 309 G--MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 14/265 (5%)
Query: 48 SNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV 107
S+ L+H ++++ + + + G+ + +S N +++ Y++ G + AR+VF+ MPE+++
Sbjct: 56 SDDLLH----YQNVVHGQIIVWGLELDTYLS-NILINLYSRAGGMVYARKVFEKMPERNL 110
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMM-- 164
+SWS ++ G Y+E+L VF E R PNE + S + AC+ L +GR M
Sbjct: 111 VSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVF 168
Query: 165 --HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC 222
+++ + + + T L+D Y K G I A VF + + W +MI G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDA--LPEKSTVTWTTMISGCVK 226
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH 282
G SL LF ++ V PD +LSAC+ ++ + + G+ +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 283 YACMVDVMARAGQVAEAYQFLCQIP 307
++D + G+V A++ +P
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMP 311
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 244 bits (623), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/421 (33%), Positives = 229/421 (54%), Gaps = 13/421 (3%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D + + L + + + E L + + + G R S++ ++ DI N R +
Sbjct: 226 DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIH 285
Query: 69 DGIPVK-----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
G+ VK ++V N+++D Y K + A +F+ M E+D+ +W+ ++ + GD+
Sbjct: 286 -GLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDH 344
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID----NELPLTLVL 179
D LA+FE M SG +P+ VT+ +VL C L +L +GR +H Y+I N +
Sbjct: 345 DGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFI 404
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
SL+DMY KCG +++A VF S M+ D WN MI G+ + +LD+FS M
Sbjct: 405 HNSLMDMYVKCGDLRDARMVFDS--MRVKDSASWNIMINGYGVQSCGELALDMFSCMCRA 462
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAE 298
GVKPDEIT++ LL AC+H G + E F + + P S+HYAC++D++ RA ++ E
Sbjct: 463 GVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEE 522
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
AY+ PI + ++L+ C HG DLA G++L ELEP G YV +SNVY
Sbjct: 523 AYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVE 582
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
++++ +R+AM + VKK+PG S++ + +H F +++HP + I+ L ++S
Sbjct: 583 AGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISH 642
Query: 419 M 419
M
Sbjct: 643 M 643
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 148/322 (45%), Gaps = 40/322 (12%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD TFP L K S + ++ +HG K G++SD +V + L+ YS F + +A
Sbjct: 156 GILPDKYTFPSLLKGSDAMELSDVK-KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDA 214
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD-VLSWSCLIDGYVRKGDY 123
+KV FD +P++D + W+ L++GY + +
Sbjct: 215 QKV-------------------------------FDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
++AL VF +MR G + T+ SVL A G +D GR +H + +V+ +L
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+DMY K ++EA +F + M D+F WNS++ G +L LF M G++P
Sbjct: 304 IDMYGKSKWLEEANSIFEA--MDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRP 361
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH----YACMVDVMARAGQVAEA 299
D +T +L C +++ + +G+ + + ++D+ + G + +A
Sbjct: 362 DIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDA 421
Query: 300 YQFLCQIPIQPTASMLGALLNG 321
+ ++ +AS ++NG
Sbjct: 422 RMVFDSMRVKDSASW-NIMING 442
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 105/234 (44%), Gaps = 47/234 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGY----ESDRFVSNSLIHMYS 56
ML G+ PD +T + L G IHGY+ +G S+ F+ NSL+ MY
Sbjct: 354 MLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYV 413
Query: 57 SFRDIPNARKVFDGIPVKNLVSWNSMLDGYA--KCGDISMARQVFDLMPEQDVLSWSCLI 114
D+ +AR VFD + VK+ SWN M++GY CG++
Sbjct: 414 KCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGEL---------------------- 451
Query: 115 DGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR--MMHHYVIDNE 172
AL +F M +G KP+E+T V +L AC+H G L++GR + + N
Sbjct: 452 -----------ALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNI 500
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHG 224
LP T ++DM + ++EA + + KP + +W S++ HG
Sbjct: 501 LP-TSDHYACVIDMLGRADKLEEA---YELAISKPICDNPVVWRSILSSCRLHG 550
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 3/220 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
S+++ YAKCG + A VF E+DV ++ LI G+V G +A+ + EMR +G
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFG-GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P++ T S+L + L + +H + + LV Y+K ++++A V
Sbjct: 159 PDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKV 217
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F L D +WN+++ G++ +++L +FS+M GV T ++LSA G
Sbjct: 218 FDE-LPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSG 276
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ K G ++D+ ++ + EA
Sbjct: 277 DIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEA 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRTSLVDMYAKCGAIQEALHV 199
N T ++ L CA G+ +H +++ L + TSLV+MYAKCG ++ A+ V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F DVF +N++I GF +G ++++ + EM G+ PD+ T+ +LL
Sbjct: 119 FGG---SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG----- 170
Query: 260 LVKEAWYFFDCLGKNGMTPK----SEHY--ACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
+A D +G+ K S+ Y + +V ++ V +A + ++P + +
Sbjct: 171 --SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSV 228
Query: 314 MLGALLNG 321
+ AL+NG
Sbjct: 229 LWNALVNG 236
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 244 bits (623), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 195/331 (58%), Gaps = 7/331 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
++LD Y+K GD+ A ++FD MP +DV SW+ LI G V EA+ +++ M G +
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 140 PNEVTMVSVLCACAHLGALDKGR-MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
+EVT+V+ L AC+HLG + +G + H Y DN +++ + +DMY+KCG + +A
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAYQ 262
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF K S V WN+MI GFA HG +L++F ++ G+KPD+++YL L+AC H
Sbjct: 263 VFEQFTGKKS-VVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHA 321
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
GLV+ F+ + G+ +HY C+VD+++RAG++ EA+ +C + + P + +L
Sbjct: 322 GLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSL 381
Query: 319 LNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
L + +++AE R++ E+ + DG +V LSNVYA RW +R+ ME VK
Sbjct: 382 LGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVK 441
Query: 379 KSPGYSFVEMHGALHRFVAHDKSHPSSEQIY 409
K PG S++E G +H F DKSH +IY
Sbjct: 442 KIPGLSYIEAKGTIHEFYNSDKSHEQWREIY 472
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 12/255 (4%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
GD+S A Q+F +P+ W+ +I G+ A + + M + + V L
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 150 C------ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
ACA +H + L +L T+L+D Y+K G + A +F
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE- 169
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
M DV WN++I G E+++L+ M G++ E+T + L AC+H G VKE
Sbjct: 170 -MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKE 228
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCM 323
F + + + +D+ ++ G V +AYQ Q + + ++ G
Sbjct: 229 GENIFHGYSNDNVIVSN----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFA 284
Query: 324 NHGKLDLAETVGRKL 338
HG+ A + KL
Sbjct: 285 VHGEAHRALEIFDKL 299
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 201/348 (57%), Gaps = 3/348 (0%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
+N+ NS++ Y KC ++ A +F + + ++SW+ +I G+ + G +AL F +M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
R KP+ T VSV+ A A L + +H V+ + L + + T+LVDMYAKCGAI
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
A +F +M V WN+MI G+ HG K +L+LF EM +KP+ +T+L+++S
Sbjct: 490 MIARLIF--DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 254 ACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
AC+H GLV+ F + +N + +HY MVD++ RAG++ EA+ F+ Q+P++P
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAM 372
++ GA+L C H ++ AE +L EL P G +V L+N+Y W+K +R +M
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSM 667
Query: 373 ERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
R G++K+PG S VE+ +H F + +HP S++IY L ++ +K
Sbjct: 668 LRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 44/324 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P +T + A + L +G IHGY ++G++S +S +L+ MY
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY------------ 281
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
AKCG + ARQ+FD M E++V+SW+ +ID YV+ + EA+
Sbjct: 282 -------------------AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAM 322
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F++M G KP +V+++ L ACA LG L++GR +H ++ L + + SL+ MY
Sbjct: 323 LIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
KC + A +F G ++ + WN+MI GFA +G ++L+ FS+M VKPD T
Sbjct: 383 CKCKEVDTAASMF--GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 248 YLNLLSACAHGGLVKEAWYFF-----DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
Y+++++A A + A + CL KN + +VD+ A+ G + A +
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA-----LVDMYAKCGAIMIA-RL 494
Query: 303 LCQIPIQPTASMLGALLNGCMNHG 326
+ + + + A+++G HG
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHG 518
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 127/254 (50%), Gaps = 33/254 (12%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P F +L K + +G IHG + K+G+ D F L +MY
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMY---------- 180
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
AKC ++ AR+VFD MPE+D++SW+ ++ GY + G
Sbjct: 181 ---------------------AKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL + + M KP+ +T+VSVL A + L + G+ +H Y + + + + T+LVD
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MYAKCG+++ A +F L + +V WNSMI + + KE++ +F +M GVKP +
Sbjct: 280 MYAKCGSLETARQLFDGMLER--NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 246 ITYLNLLSACAHGG 259
++ + L ACA G
Sbjct: 338 VSVMGALHACADLG 351
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 2/218 (0%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
+ + G + A +VF+ + + + + ++ G+ + D D+AL F MR +P
Sbjct: 79 FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNF 138
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+L C L G+ +H ++ + L L T L +MYAKC + EA VF M
Sbjct: 139 TYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR--M 196
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
D+ WN+++ G++ +G+ + +L++ M +KP IT +++L A + L+
Sbjct: 197 PERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGK 256
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
++G +VD+ A+ G + A Q
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD T+ + A A L IHG + ++ + + FV+ +L+ MY+ I AR
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+FD + +++ +WN+M+DGY G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGT-------------------------------HGFGKA 522
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVLRTSLV 184
AL +FEEM+ KPN VT +SV+ AC+H G ++ G + + +N + L++ ++V
Sbjct: 523 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 582
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
D+ + G + EA +KP+ V ++ +M+G H
Sbjct: 583 DLLGRAGRLNEAWDFIMQMPVKPA-VNVYGAMLGACQIH 620
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/445 (32%), Positives = 225/445 (50%), Gaps = 50/445 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR PD TF LA + G IH + G + D N+ I MYS
Sbjct: 247 MLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYS---- 302
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
K D AR +FD+M + +SW+ +I GY K
Sbjct: 303 ---------------------------KSEDTCSARLLFDIMTSRTCVSWTVMISGYAEK 335
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL----- 175
GD DEALA+F M SG KP+ VT++S++ C G+L+ G+ ID +
Sbjct: 336 GDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW-----IDARADIYGCKR 390
Query: 176 -TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+++ +L+DMY+KCG+I EA +F + K V W +MI G+A +G+ E+L LFS
Sbjct: 391 DNVMICNALIDMYSKCGSIHEARDIFDNTPEKT--VVTWTTMIAGYALNGIFLEALKLFS 448
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARA 293
+M + KP+ IT+L +L ACAH G +++ W +F + + ++P +HY+CMVD++ R
Sbjct: 449 KMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRK 508
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
G++ EA + + + +P A + GALLN C H + +AE L LEP YV ++
Sbjct: 509 GKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMA 568
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLG 413
N+YA WD +R M++ +KK PG S ++++G H F + H +E IY L
Sbjct: 569 NIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLN 628
Query: 414 --FIVSQMKHIV---DYENQEYYFY 433
+ ++ KH++ Y+ Q Y +
Sbjct: 629 GLSLFAKDKHVLYKDVYKEQSYELF 653
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G P++ TFPF+AKA A L +H ++ K+ + SD FV + + M+
Sbjct: 43 MKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMF----- 97
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KC + A +VF+ MPE+D +W+ ++ G+ +
Sbjct: 98 --------------------------VKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G D+A ++F EMR++ P+ VT+++++ + + +L MH I + + + +
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+ + Y KCG + A VF + V WNSM ++ G ++ L+ M
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 241 VKPDEITYLNLLSACAH 257
KPD T++NL ++C +
Sbjct: 252 FKPDLSTFINLAASCQN 268
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD--VLSWSCLIDGYVRKGDYDEAL 127
G+ V+ V+ N+ + Y KCGD+ A+ VF+ + D V+SW+ + Y G+ +A
Sbjct: 183 GVDVQVTVA-NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAF 241
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
++ M KP+ T +++ +C + L +GR++H + I + + + MY
Sbjct: 242 GLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMY 301
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+K A +F +M W MI G+A G + E+L LF M G KPD +T
Sbjct: 302 SKSEDTCSARLLF--DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 248 YLNLLSACAH-GGLVKEAWY-----FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
L+L+S C G L W + C N M + ++D+ ++ G + EA
Sbjct: 360 LLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNA-----LIDMYSKCGSIHEARD 414
Query: 302 FLCQIP----IQPTASMLGALLNG 321
P + T + G LNG
Sbjct: 415 IFDNTPEKTVVTWTTMIAGYALNG 438
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 96 RQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
R+++ + V +W+ I V + D E+L +F EM+ G +PN T V ACA L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNS 215
+ M+H ++I + + + T+ VDM+ KC ++ A VF M D WN+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFER--MPERDATTWNA 123
Query: 216 MIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
M+ GF G ++ LF EM + + PD +T + L+ + +
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 226/452 (50%), Gaps = 69/452 (15%)
Query: 1 MLRVGVF-PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
M+R G+ PD TFP + K + + +G ++HG + + G++ D V S + Y +
Sbjct: 100 MMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCK 159
Query: 60 DIPNARKVF-------------------------------DGIPVKNLVSWNSMLDGYAK 88
D+ +ARKVF D +P +NL SWN+++DG K
Sbjct: 160 DLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVK 219
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY------------------------- 123
GD+ A+++FD MP++D++S++ +IDGY + GD
Sbjct: 220 SGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGY 279
Query: 124 ------DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID--NELPL 175
+EA VF EM KP+E MV ++ AC+ +G + + Y+ N+
Sbjct: 280 AQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSS 339
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
V+ +L+DM AKCG + A +F M D+ + SM+ G A HG E++ LF +
Sbjct: 340 HYVV-PALIDMNAKCGHMDRAAKLFEE--MPQRDLVSYCSMMEGMAIHGCGSEAIRLFEK 396
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAG 294
M G+ PDE+ + +L C LV+E +F+ + K + +HY+C+V++++R G
Sbjct: 397 MVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTG 456
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
++ EAY+ + +P + AS G+LL GC HG ++AE V R L ELEP G YV LSN
Sbjct: 457 KLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSN 516
Query: 355 VYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
+YA RW +R+ M G+ K G S++
Sbjct: 517 IYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 118/270 (43%), Gaps = 41/270 (15%)
Query: 98 VFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-PKPNEVTMVSVLCACAHLG 156
VF+ +P W+ LI GY K + E +++ M +G +P+E T V+ C++ G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 157 ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---------------- 200
+ G +H V+ +V+ TS VD Y KC + A VF
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 201 ---RSG----------LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+SG LM ++ WN+++ G G + + LF EM K D I+
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMP----KRDIIS 240
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF---LC 304
Y +++ A GG + A F+ G+ ++ ++ ++ A+ GQ EA++ +C
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFE--EARGVDVRA--WSALILGYAQNGQPNEAFKVFSEMC 296
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETV 334
++P ++ L++ C G +L E V
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKV 326
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 218/427 (51%), Gaps = 8/427 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKA-SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
ML PD TF L A SA G +H + K G+ S NS++ Y+
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+A + + I V VSWNS++D K G+ A +VF L PE+++++W+ +I GY R
Sbjct: 255 SRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
GD ++AL F EM SG + +VL AC+ L L G+M+H +I +
Sbjct: 315 NGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYV 374
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+LV++YAKCG I+EA F G + D+ WN+M+ F HGL ++L L+ M
Sbjct: 375 GNALVNLYAKCGDIKEADRAF--GDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP-KSEHYACMVDVMARAGQVAE 298
G+KPD +T++ LL+ C+H GLV+E F+ + K+ P + +H CM+D+ R G +AE
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAE 492
Query: 299 AYQFLCQ----IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
A + S LL C H +L V + L EP ++ +V LSN
Sbjct: 493 AKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSN 552
Query: 355 VYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGF 414
+Y RW + +R M G+KK+PG S++E+ + FV D SHP E++ L
Sbjct: 553 LYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNC 612
Query: 415 IVSQMKH 421
+ +M++
Sbjct: 613 LQHEMRN 619
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 131/288 (45%), Gaps = 33/288 (11%)
Query: 76 LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
LV S + AK G I+ ARQVFD MPE D ++W+ ++ Y R G + EA+A+F ++R
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
S KP++ + ++L CA LG + GR + VI + +L + SL+DMY KC
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 196 ALHVFR----------------------SGLMKPSDVFI---------WNSMIGGFACHG 224
A VFR DVF+ WN MI G A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSAC-AHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
++ L LF EM KPD T+ +L++AC A V + KNG + E
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 284 ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
++ + G +A + L I + S ++++ CM G+ + A
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVS-WNSIIDACMKIGETEKA 290
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 143/326 (43%), Gaps = 36/326 (11%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD +F + A L + G I + ++G+ + V+NSLI MY D +A KV
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 68 FDGI--PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
F + +N V+W S+L Y A VF MP++ +W+ +I G+ G +
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCAC-AHLGALDKGRMMHHYVIDN------------- 171
L++F+EM S KP+ T S++ AC A + GRM+H ++ N
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 172 --------------ELP----LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIW 213
EL LT V S++D K G ++AL VF L ++ W
Sbjct: 248 SFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFH--LAPEKNIVTW 305
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
+MI G+ +G +++L F EM GV D Y +L AC+ L+ CL
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEA 299
G + +V++ A+ G + EA
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEA 391
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 229/437 (52%), Gaps = 36/437 (8%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R+ P+ +TF A + L LG+ +HG + ++G+++D V N LI
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI---------- 251
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
D Y KC I + +F M ++ +SW L+ YV+ +
Sbjct: 252 ---------------------DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 290
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
++A ++ R + ++ + SVL ACA + L+ GR +H + + + T+ + ++
Sbjct: 291 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 350
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM--HIVG 240
LVDMY KCG I+++ F M ++ NS+IGG+A G V +L LF EM G
Sbjct: 351 LVDMYGKCGCIEDSEQAFDE--MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
P+ +T+++LLSAC+ G V+ FD + G+ P +EHY+C+VD++ RAG V A
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y+F+ ++PIQPT S+ GAL N C HGK L L +L+P G +V LSN +A
Sbjct: 469 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 528
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
RW +A ++RE ++ +G+KK GYS++ + +H F A D+SH +++I L + ++M
Sbjct: 529 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 588
Query: 420 KHIVDYENQEYYFYDNE 436
+ + + YD E
Sbjct: 589 EAAGYKPDLKLSLYDLE 605
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 4/191 (2%)
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
K D P L N +++ Y+K AR V L P ++V+SW+ LI G + G +
Sbjct: 34 KTLDSPPPPFLA--NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFST 91
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL F EMR G PN+ T A A L G+ +H + L + + S D
Sbjct: 92 ALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFD 151
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY K +A +F + ++ WN+ I G +E+++ F E + P+
Sbjct: 152 MYCKTRLRDDARKLFDE--IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS 209
Query: 246 ITYLNLLSACA 256
IT+ L+AC+
Sbjct: 210 ITFCAFLNACS 220
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 199/339 (58%), Gaps = 8/339 (2%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSW 110
++ +Y + R + +ARK F+ IP KN W+ M+ GY + GD+ AR +F + +D++ W
Sbjct: 102 MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIW 161
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ LI GY + G D+A+ F M+ G +P+ VT+ S+L ACA G LD GR +H +
Sbjct: 162 NTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH 221
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESL 230
+ L + +L+DMYAKCG ++ A VF S + V NSMI A HG KE+L
Sbjct: 222 RGIELNQFVSNALIDMYAKCGDLENATSVFES--ISVRSVACCNSMISCLAIHGKGKEAL 279
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
++FS M + +KPDEIT++ +L+AC HGG + E F + + P +H+ C++ ++
Sbjct: 280 EMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLL 339
Query: 291 ARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE-----LEPHQ 345
R+G++ EAY+ + ++ ++P ++LGALL C H ++AE V K+IE +
Sbjct: 340 GRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQV-MKIIETAGSITNSYS 398
Query: 346 DGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
+ +SN+YA RW A ++R ME+ G++KSPG S
Sbjct: 399 ENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 437
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 14/284 (4%)
Query: 47 VSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE-Q 105
V +SLI MY + +ARKVFD +P +N+ +WN+M+ GY GD +A +F+ + +
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR 61
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
+ ++W +I GY ++ + ++A +FE M P E+ V LG R M
Sbjct: 62 NTVTWIEMIKGYGKRIEIEKARELFERM------PFELKNVKAW--SVMLGVYVNNRKME 113
Query: 166 H-YVIDNELPLTLVLRTSL-VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
++P SL + Y + G + EA +F + D+ IWN++I G+A +
Sbjct: 114 DARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFAR--DLVIWNTLIAGYAQN 171
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
G +++D F M G +PD +T ++LSACA G + + G+
Sbjct: 172 GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVS 231
Query: 284 ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
++D+ A+ G + A I ++ A ++++ HGK
Sbjct: 232 NALIDMYAKCGDLENATSVFESISVRSVAC-CNSMISCLAIHGK 274
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD +T + A A + ++G +H I G E ++FVSN+LI MY+ D+ NA
Sbjct: 188 GYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENA 247
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
VF+ I V+++ NSM+ SCL G
Sbjct: 248 TSVFESISVRSVACCNSMI---------------------------SCL----AIHGKGK 276
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL +F M KP+E+T ++VL AC H G L +G + + ++ + L+
Sbjct: 277 EALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLI 336
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+ + G ++EA + + +KP+D + +++G H
Sbjct: 337 HLLGRSGKLKEAYRLVKEMHVKPNDT-VLGALLGACKVH 374
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 206/343 (60%), Gaps = 4/343 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
NS++D YAKC A +F +P++ +SW+ LI GYV+KG + L +F +MR S +
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
++ T +VL A A +L G+ +H ++I + + + LVDMYAKCG+I++A+ V
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F M + WN++I A +G + ++ F++M G++PD ++ L +L+AC+H G
Sbjct: 510 FEE--MPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 260 LVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
V++ +F + G+TPK +HYACM+D++ R G+ AEA + + ++P +P M ++
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 319 LNGCMNHGKLDLAETVGRKLIELEPHQDGR-YVGLSNVYAIFRRWDKARSMREAMERMGV 377
LN C H LAE KL +E +D YV +SN+YA W+K R +++AM G+
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Query: 378 KKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
KK P YS+VE++ +H F ++D++HP+ ++I + + ++++
Sbjct: 688 KKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIE 730
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 2/225 (0%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
+ I K G+++D SN ++ + ARKV+D +P KN VS N+M+ G+ K GD
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM--RVSGPKPNEVTMVSVL 149
+S AR +FD MP++ V++W+ L+ Y R +DEA +F +M S P+ VT ++L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
C + +H + + L S V + + C + L + D
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+N++I G+ GL ES+ LF +M G +P + T+ +L A
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 145/345 (42%), Gaps = 36/345 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G P TF + KA L LG +H G+ D V N +
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQI--------- 291
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD Y+K + R +FD MPE D +S++ +I Y +
Sbjct: 292 ----------------------LDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
Y+ +L F EM+ G ++L A+L +L GR +H + L +
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SLVDMYAKC +EA +F+S + W ++I G+ GL L LF++M
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKS--LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
++ D+ T+ +L A A + + ++G + +VD+ A+ G + +A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEP 343
Q ++P + S AL++ ++G + A K+IE L+P
Sbjct: 508 QVFEEMPDRNAVSW-NALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 31/153 (20%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D TF + KASA LG +H +I ++G N VF
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSG----------------------NLENVF 488
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
G + ++D YAKCG I A QVF+ MP+++ +SW+ LI + GD + A+
Sbjct: 489 SG---------SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIG 539
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
F +M SG +P+ V+++ VL AC+H G +++G
Sbjct: 540 AFAKMIESGLQPDSVSILGVLTACSHCGFVEQG 572
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 130/322 (40%), Gaps = 34/322 (10%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
PDH+TF L + + +H + K G++++ F++ S
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS--------------- 187
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
N +L Y + + +A +F+ +PE+D ++++ LI GY + G Y E
Sbjct: 188 --------------NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTE 233
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
++ +F +MR SG +P++ T VL A L G+ +H + + ++D
Sbjct: 234 SIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILD 293
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
Y+K + E +F M D +N +I ++ + SL F EM +G
Sbjct: 294 FYSKHDRVLETRMLFDE--MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRN 351
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA-CMVDVMARAGQVAEAYQFLC 304
+ +LS A+ ++ C H +VD+ A+ EA
Sbjct: 352 FPFATMLSIAANLSSLQMGRQLH-CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFK 410
Query: 305 QIPIQPTASMLGALLNGCMNHG 326
+P + T S AL++G + G
Sbjct: 411 SLPQRTTVSWT-ALISGYVQKG 431
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 217/393 (55%), Gaps = 3/393 (0%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
GL +H + + + D + N++I Y+ + AR +FD + K+ V++ +++ GY
Sbjct: 252 FGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYM 311
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
G + A +F M + +W+ +I G ++ ++E + F EM G +PN VT+ S
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSS 371
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L + + L G+ +H + I N + + TS++D YAK G + A VF + K
Sbjct: 372 LLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDN--CKD 429
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
+ W ++I +A HG + LF +M +G KPD++T +LSA AH G A +
Sbjct: 430 RSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHI 489
Query: 268 FDC-LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
FD L K + P EHYACMV V++RAG++++A +F+ ++PI P A + GALLNG G
Sbjct: 490 FDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLG 549
Query: 327 KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
L++A +L E+EP G Y ++N+Y RW++A +R M+R+G+KK PG S++
Sbjct: 550 DLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWI 609
Query: 387 EMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
E L F+A D S S+++Y ++ +V M
Sbjct: 610 ETEKGLRSFIAKDSSCERSKEMYEIIEGLVESM 642
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 169/377 (44%), Gaps = 45/377 (11%)
Query: 8 PDHLTFPFLAKA-SAC--LLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
PD ++ + KA S C L +HG++ + G++SD FV N +I Y+ +I +A
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESA 186
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
RKVFD + +++VSWNSM+ GY++ G ++++ M
Sbjct: 187 RKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAM---------------------- 224
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+ S KPN VT++SV AC L G +H +I+N + + L L +++
Sbjct: 225 --------LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVI 276
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
YAKCG++ A +F M D + ++I G+ HGLVKE++ LFSEM +G+
Sbjct: 277 GFYAKCGSLDYARALFDE--MSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS-- 332
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV---AEAYQ 301
T+ ++S +E F + + G P + + ++ + + + E +
Sbjct: 333 --TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
F + + ++++ N+ KL R + + + YA+
Sbjct: 391 FAIRNGADNNIYVTTSIID---NYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGD 447
Query: 362 WDKARSMREAMERMGVK 378
D A S+ + M+ +G K
Sbjct: 448 SDSACSLFDQMQCLGTK 464
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 100/229 (43%), Gaps = 41/229 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R G P+ +T L + + G IH + + G +++ +V+ S+I Y+
Sbjct: 357 MIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGF 416
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A++VFD ++L++W +++ YA
Sbjct: 417 LLGAQRVFDNCKDRSLIAWTAIITAYAV-------------------------------H 445
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL- 179
GD D A ++F++M+ G KP++VT+ +VL A AH G D M ++ D+ L +
Sbjct: 446 GDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSD----MAQHIFDSMLTKYDIEP 501
Query: 180 ----RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
+V + ++ G + +A+ + P +W +++ G + G
Sbjct: 502 GVEHYACMVSVLSRAGKLSDAMEFISKMPIDPI-AKVWGALLNGASVLG 549
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 221/422 (52%), Gaps = 33/422 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESD-RFVSNSLIHMYSSFR 59
ML GV P +TF + +A LG HG ITK G+ S+ ++ SL+ MY + R
Sbjct: 620 MLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR 679
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ A +F +L + ++ W+ ++ G+ +
Sbjct: 680 GMTEACALFS------------------------------ELSSPKSIVLWTGMMSGHSQ 709
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G Y+EAL ++EMR G P++ T V+VL C+ L +L +GR +H + L +
Sbjct: 710 NGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+L+DMYAKCG ++ + VF + + S+V WNS+I G+A +G +++L +F M
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDE-MRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDC-LGKNGMTPKSEHYACMVDVMARAGQVAE 298
+ PDEIT+L +L+AC+H G V + F+ +G+ G+ + +H ACMVD++ R G + E
Sbjct: 829 HIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQE 888
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A F+ ++P A + +LL C HG E KLIELEP YV LSN+YA
Sbjct: 889 ADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYAS 948
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
W+KA ++R+ M GVKK PGYS++++ H F A DKSH +I M L +
Sbjct: 949 QGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDL 1008
Query: 419 MK 420
MK
Sbjct: 1009 MK 1010
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 150/333 (45%), Gaps = 37/333 (11%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+FP+ TF + A E G IH + K G E + + +L+ MY+ I +AR
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 215
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCG----------------------------------- 90
+VF+ I N V W + GY K G
Sbjct: 216 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 275
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
+ AR +F M DV++W+ +I G+ ++G A+ F MR S K T+ SVL
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
A + LD G ++H I L + + +SLV MY+KC ++ A VF + L + +DV
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA-LEEKNDV 394
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
F WN+MI G+A +G + ++LF +M G D+ T+ +LLS CA ++ F
Sbjct: 395 F-WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 271 LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ K + +VD+ A+ G + +A Q
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 133/252 (52%), Gaps = 9/252 (3%)
Query: 36 ITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK-----NLVSWNSMLDGYAKCG 90
+ +GY D F SL+ ++ D+ + F I +K NL N+++D YAKCG
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
+ ARQ+F+ M ++D ++W+ +I YV+ + EA +F+ M + G + + S L
Sbjct: 478 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 537
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
AC H+ L +G+ +H + L L +SL+DMY+KCG I++A VF S + V
Sbjct: 538 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS--LPEWSV 595
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
N++I G++ + L +E++ LF EM GV P EIT+ ++ AC + F
Sbjct: 596 VSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 271 LGKNGMTPKSEH 282
+ K G + + E+
Sbjct: 655 ITKRGFSSEGEY 666
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 143/323 (44%), Gaps = 38/323 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + V T + A + +LGL +H K G S+ +V +SL+ MYS
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A KVF+ + KN V WN+M+ GYA
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYA-------------------------------HN 406
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ + + +F +M+ SG ++ T S+L CA L+ G H +I +L L +
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+LVDMYAKCGA+++A +F M D WN++IG + E+ DLF M++ G
Sbjct: 467 NALVDMYAKCGALEDARQIFER--MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524
Query: 241 VKPDEITYLNLLSACAH-GGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAE 298
+ D + L AC H GL + CL K G+ + ++D+ ++ G + +
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQ--VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 299 AYQFLCQIPIQPTASMLGALLNG 321
A + +P SM AL+ G
Sbjct: 583 ARKVFSSLPEWSVVSM-NALIAG 604
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 13/299 (4%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++D YAKC +S A + FD + E+DV +W+ ++ Y G + L F + +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
PN+ T VL CA ++ GR +H +I L +LVDMYAKC I +A V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F ++ P+ V W + G+ GL +E++ +F M G +PD + ++ +++ G
Sbjct: 218 FE-WIVDPNTV-CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 275
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG--QVAEAYQF-LCQIPIQPTASMLG 316
+K+A F + +P + M+ + G VA Y F + + ++ T S LG
Sbjct: 276 KLKDARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 317 ALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVG--LSNVYAIFRRWDKARSMREAME 373
++L+ LDL V + I+L + YVG L ++Y+ + + A + EA+E
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASN-IYVGSSLVSMYSKCEKMEAAAKVFEALE 389
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 241 bits (615), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 239/485 (49%), Gaps = 75/485 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYIT-------------------KAGY 41
MLR G PD +FPF+ K+ A L G +H ++T K G
Sbjct: 44 MLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGL 103
Query: 42 ESD--------------RFVSNSLIHMYSSFRDIPNARKVF----------DGIPVKNLV 77
+D N+LI Y++ + +A +F D + + LV
Sbjct: 104 VADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLV 163
Query: 78 S--------W---------------------NSMLDGYAKCGDISMARQVFDLMPEQDVL 108
W NS + Y KCG + R++FD MP + ++
Sbjct: 164 PLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLI 223
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
+W+ +I GY + G + L ++E+M+ SG P+ T+VSVL +CAHLGA G + V
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLV 283
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
N + + + + MYA+CG + +A VF +M + W +MIG + HG+ +
Sbjct: 284 ESNGFVPNVFVSNASISMYARCGNLAKARAVF--DIMPVKSLVSWTAMIGCYGMHGMGEI 341
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMV 287
L LF +M G++PD ++ +LSAC+H GL + F + + + P EHY+C+V
Sbjct: 342 GLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLV 401
Query: 288 DVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG 347
D++ RAG++ EA +F+ +P++P ++ GALL C H +D+AE K+IE EP+ G
Sbjct: 402 DLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIG 461
Query: 348 RYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQ 407
YV +SN+Y+ + + +R M +K PGYS+VE G +H F+A D+SH +E+
Sbjct: 462 YYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEE 521
Query: 408 IYMML 412
++ ML
Sbjct: 522 VHRML 526
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%)
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
W+ + + + E+++++ M SG P+ + +L +CA L G+ +H +V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES 229
+ T+L+ MY KCG + +A VF +N++I G+ + V ++
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACA 256
+F M GV D +T L L+ C
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT 167
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 222/417 (53%), Gaps = 34/417 (8%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+H TF KA L +G + G K G S+ V+NS+I M+
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF---------- 418
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
V + M D A++ F+ + E++++S++ +DG R ++++
Sbjct: 419 -----------VKSDRMED----------AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A + E+ + T S+L A++G++ KG +H V+ L + +L+
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS 517
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY+KCG+I A VF M+ +V W SMI GFA HG L+ F++M GVKP+E
Sbjct: 518 MYSKCGSIDTASRVF--NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+TY+ +LSAC+H GLV E W F+ + ++ + PK EHYACMVD++ RAG + +A++F+
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
+P Q + L C H +L + RK++EL+P++ Y+ LSN+YA +W++
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKH 421
+ MR M+ + K G S++E+ +H+F D +HP++ QIY L +++++K
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKR 752
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 166/384 (43%), Gaps = 82/384 (21%)
Query: 2 LRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAG-YESDRFVSNSLIHMYSSFRD 60
L +G+ P+ + + +A + +G G++ K G +ESD V SLI M+
Sbjct: 158 LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF----- 212
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ NS + Y +VFD M E +V++W+ +I ++
Sbjct: 213 ---------------VKGENSFENAY----------KVFDKMSELNVVTWTLMITRCMQM 247
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EA+ F +M +SG + ++ T+ SV ACA L L G+ +H + I + L +
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS--GLVDDVE 305
Query: 181 TSLVDMYAKC---GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH-GLVKESLDLFSEM 236
SLVDMYAKC G++ + VF M+ V W ++I G+ + L E+++LFSEM
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDR--MEDHSVMSWTALITGYMKNCNLATEAINLFSEM 363
Query: 237 HIVG-VKPDEITYLNLLSACAH----------------GGL------------------- 260
G V+P+ T+ + AC + GL
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 261 VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGA 317
+++A F+ L + + Y +D R +A++ L +I + +A +
Sbjct: 424 MEDAQRAFESLSEKNLVS----YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 318 LLNGCMNHGKLDLAETVGRKLIEL 341
LL+G N G + E + ++++L
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKL 503
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 43/265 (16%)
Query: 1 MLRVGVFP-DHLTFPFLAKASACLLKRE--LGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M R G+ P D +TF L K+ C+ R+ LG +H + + E D + NSLI +YS
Sbjct: 52 MARDGIRPMDSVTFSSLLKS--CIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYS- 108
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP---EQDVLSWSCLI 114
K GD + A VF+ M ++DV+SWS ++
Sbjct: 109 ------------------------------KSGDSAKAEDVFETMRRFGKRDVVSWSAMM 138
Query: 115 DGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-EL 173
Y G +A+ VF E G PN+ +V+ AC++ + GR+ +++
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 174 PLTLVLRTSLVDMYAKC-GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
+ + SL+DM+ K + + A VF M +V W MI G +E++
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDK--MSELNVVTWTLMITRCMQMGFPREAIRF 256
Query: 233 FSEMHIVGVKPDEITYLNLLSACAH 257
F +M + G + D+ T ++ SACA
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAE 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 154/380 (40%), Gaps = 46/380 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY---SS 57
M+ G D T + A A L LG +H + ++G D V SL+ MY S+
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSA 317
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
+ + RKVFD + +++SW +++ GY K +++
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT----------------------- 354
Query: 118 VRKGDYDEALAVFEEMRVSG-PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
EA+ +F EM G +PN T S AC +L G+ + L
Sbjct: 355 -------EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL-VKESLDLFSE 235
+ S++ M+ K +++A F S + ++ +N+ + G C L +++ L SE
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFES--LSEKNLVSYNTFLDG-TCRNLNFEQAFKLLSE 464
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
+ + T+ +LLS A+ G +++ + K G++ ++ + ++ G
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHG-KLDLAETVGRKLIELEPHQDGRYVGL-- 352
+ A + + + S +++ G HG + + ET + + E + YV +
Sbjct: 525 IDTASRVFNFMENRNVISWT-SMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILS 583
Query: 353 --SNVYAIFRRWDKARSMRE 370
S+V + W SM E
Sbjct: 584 ACSHVGLVSEGWRHFNSMYE 603
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKP-NEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
LI ++ GD A++ + M G +P + VT S+L +C G+++H +I+
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRS-GLMKPSDVFIWNSMIGGFACHGLVKESL 230
++ VL SL+ +Y+K G +A VF + DV W++M+ + +G +++
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+F E +G+ P++ Y ++ AC++ V
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFV 182
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/351 (37%), Positives = 205/351 (58%), Gaps = 11/351 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFD-LMP-EQDVLSWSCLIDGYVRKGDYDEALAVFEEM--RV 135
N ++D YAKC + AR +FD L P E+DV++W+ +I GY + GD ++AL + EM
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL-PLTLVLRTSLVDMYAKCGAIQ 194
+PN T+ L ACA L AL G+ +H Y + N+ + L + L+DMYAKCG+I
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+A VF +M ++V W S++ G+ HG +E+L +F EM +G K D +T L +L A
Sbjct: 531 DARLVF-DNMMAKNEV-TWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 255 CAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
C+H G++ + +F+ + G++P EHYAC+VD++ RAG++ A + + ++P++P
Sbjct: 589 CSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPV 648
Query: 314 MLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAME 373
+ A L+ C HGK++L E K+ EL + DG Y LSN+YA RW +R M
Sbjct: 649 VWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMR 708
Query: 374 RMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVD 424
GVKK PG S+VE F DK+HP +++IY +L + M+ I D
Sbjct: 709 HKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL---LDHMQRIKD 756
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 162/312 (51%), Gaps = 20/312 (6%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD++T + A L LG +H + + + FV N L+ MY+ + A
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRK 120
VF + VK++VSWN+M+ GY++ G A ++F+ M E+ DV++WS I GY ++
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL--- 177
G EAL V +M SG KPNEVT++SVL CA +GAL G+ +H Y I + P+ L
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI--KYPIDLRKN 401
Query: 178 ------VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
++ L+DMYAKC + A +F S K DV W MIGG++ HG ++L+
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 232 LFSEM--HIVGVKPDEITYLNLLSACAHGGLVK--EAWYFFDCLGKNGMTPKSEHYACMV 287
L SEM +P+ T L ACA ++ + + + + P C++
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLI 520
Query: 288 DVMARAGQVAEA 299
D+ A+ G +++A
Sbjct: 521 DMYAKCGSISDA 532
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 32/297 (10%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ TFPF+ KA + G + H G+ S+ FV N+L+ MYS R + +ARKV
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD + V ++VSWNS+++ YAK G +A ++F M +
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE---------------------- 222
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
G +P+ +T+V+VL CA LG G+ +H + + +E+ + + LVDMY
Sbjct: 223 --------FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AKCG + EA VF + M DV WN+M+ G++ G ++++ LF +M +K D +T
Sbjct: 275 AKCGMMDEANTVFSN--MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+ +S A GL EA + +G+ P ++ A G + + C
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 120/280 (42%), Gaps = 8/280 (2%)
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD--VLSWSCLIDGYVRKGDYDEAL 127
GI NL S ++ Y G +S A + P D V W+ LI Y G ++ L
Sbjct: 55 GILTLNLTS--HLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCL 112
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F M P+ T V AC + ++ G H + + + +LV MY
Sbjct: 113 YLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMY 172
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEI 246
++C ++ +A VF M DV WNS+I +A G K +L++FS M + G +PD I
Sbjct: 173 SRCRSLSDARKVFDE--MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI 230
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
T +N+L CA G + M C+VD+ A+ G + EA +
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
++ S A++ G G+ + A + K+ E + D
Sbjct: 291 SVKDVVS-WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 99/227 (43%), Gaps = 44/227 (19%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYES-DRFVSNSLIHMYSSFRDIPNARK 66
P+ T A A L +G IH Y + + FVSN LI MY+ I +AR
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARL 534
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
VFD + KN V+W S++ GY + GY +EA
Sbjct: 535 VFDNMMAKNEVTWTSLMTGYG--------------------------MHGY-----GEEA 563
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR------ 180
L +F+EMR G K + VT++ VL AC+H G +D+G M ++ N + +
Sbjct: 564 LGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG--MEYF---NRMKTVFGVSPGPEHY 618
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
LVD+ + G + AL + M+P V +W + + HG V+
Sbjct: 619 ACLVDLLGRAGRLNAALRLIEEMPMEPPPV-VWVAFLSCCRIHGKVE 664
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 222/416 (53%), Gaps = 39/416 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD +T L ASA L G IHGY + G+ L HM
Sbjct: 329 GLQPDVITSINLLPASAILE----GRTIHGYAMRRGF---------LPHM---------- 365
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
V +++D Y +CG + A +FD M E++V+SW+ +I YV+ G
Sbjct: 366 ------------VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNY 413
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
AL +F+E+ S P+ T+ S+L A A +L +GR +H Y++ + ++ SLV
Sbjct: 414 SALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLV 473
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MYA CG +++A F L+K DV WNS+I +A HG + S+ LFSEM V P+
Sbjct: 474 HMYAMCGDLEDARKCFNHILLK--DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPN 531
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ T+ +LL+AC+ G+V E W +F+ + + G+ P EHY CM+D++ R G + A +FL
Sbjct: 532 KSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFL 591
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
++P PTA + G+LLN NH + +AE ++ ++E G YV L N+YA RW+
Sbjct: 592 EEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWE 651
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
++ ME G+ ++ S VE G H F D+SH ++ +IY +L +VS+M
Sbjct: 652 DVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLD-VVSRM 706
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 163/335 (48%), Gaps = 42/335 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV D T+PF+ K+ A + E G IH + K G+ SD +V NSLI +Y
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY----- 175
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+K +W+ A +VF+ MPE+D++SW+ +I GY+
Sbjct: 176 ------------MKLGCAWD--------------AEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL-TLVL 179
GD +L +F+EM G KP+ + +S L AC+H+ + G+ +H + + + + +++
Sbjct: 210 GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV 269
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HI 238
TS++DMY+K G + A +F M ++ WN MIG +A +G V ++ F +M
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNG--MIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
G++PD IT +NLL A A + E + G P ++D+ GQ+
Sbjct: 328 NGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 299 A---YQFLCQIPIQPTASMLGALLNGCMNHGKLDL 330
A + + + + S++ A + N+ L+L
Sbjct: 384 AEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 2/175 (1%)
Query: 83 LDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNE 142
L G+A + A Q+FD M + D W+ +I G+ G Y EA+ + M +G K +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS 202
T V+ + A + +L++G+ +H VI + + SL+ +Y K G +A VF
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 203 GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
M D+ WNSMI G+ G SL LF EM G KPD + ++ L AC+H
Sbjct: 191 --MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 222/424 (52%), Gaps = 40/424 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G+ P+ LTFPFL KA A L G I + K G++ D +V N+LIH+Y +
Sbjct: 104 MKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGT--- 160
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
C S AR+VFD M E++V+SW+ ++ V
Sbjct: 161 ----------------------------CKKTSDARKVFDEMTERNVVSWNSIMTALVEN 192
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + F EM P+E TMV +L AC G L G+++H V+ EL L L
Sbjct: 193 GKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLG 250
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIV 239
T+LVDMYAK G ++ A VF M +V+ W++MI G A +G +E+L LFS+M
Sbjct: 251 TALVDMYAKSGGLEYARLVFER--MVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAE 298
V+P+ +T+L +L AC+H GLV + + +F + K + + P HY MVD++ RAG++ E
Sbjct: 309 SVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNE 368
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLD---LAETVGRKLIELEPHQDGRYVGLSNV 355
AY F+ ++P +P A + LL+ C H D + E V ++LIELEP + G V ++N
Sbjct: 369 AYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANR 428
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
+A R W +A +R M+ +KK G S +E+ G+ HRF + IY +L
Sbjct: 429 FAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLF 488
Query: 416 VSQM 419
Q+
Sbjct: 489 KFQL 492
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 31/227 (13%)
Query: 30 LAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKC 89
L IHG I + ++D F+ + L+ + S +
Sbjct: 30 LQIHGQIHLSSLQNDSFIISELVRVSS-----------------------------LSLA 60
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
D++ AR + + +W+ L GY E++ V+ EM+ G KPN++T +L
Sbjct: 61 KDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLL 120
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
ACA L GR + V+ + + + +L+ +Y C +A VF M +
Sbjct: 121 KACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDE--MTERN 178
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
V WNS++ +G + + F EM PDE T + LLSAC
Sbjct: 179 VVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG 225
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 211/403 (52%), Gaps = 42/403 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ D P L KAS LL RE G IH + K YESD F+ +SLI MYS F +
Sbjct: 108 MYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGE 167
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMA------------------------- 95
+ NARKVF + ++LV +N+M+ GYA A
Sbjct: 168 VGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISG 227
Query: 96 ----------RQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++ +LM + DV+SW+ +I G V ++A F++M G PN
Sbjct: 228 FSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPN 287
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
T++++L AC L + G+ +H Y + L +R++L+DMY KCG I EA+ +FR
Sbjct: 288 SATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFR 347
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
K + F NSMI +A HGL ++++LF +M G K D +T+ +L+AC+H GL
Sbjct: 348 KTPKKTTVTF--NSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLT 405
Query: 262 KEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLN 320
F + K + P+ EHYACMVD++ RAG++ EAY+ + + ++P + GALL
Sbjct: 406 DLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLA 465
Query: 321 GCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
C NHG ++LA + L ELEP G + L+++YA W+
Sbjct: 466 ACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWE 508
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 10/250 (4%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y +CG + AR+VFD MP++D+ +I R G Y E+L F EM G K + +
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
S+L A +L + G+M+H V+ + +SL+DMY+K G + A VF +
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSD--L 178
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
D+ ++N+MI G+A + E+L+L +M ++G+KPD IT+ L+S +H ++
Sbjct: 179 GEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVS 238
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGC 322
+ + +G P + ++ + Q +A+ Q+ + P ++ + LL C
Sbjct: 239 EILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
Query: 323 -----MNHGK 327
M HGK
Sbjct: 299 TTLAYMKHGK 308
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+GR++H +++ + + + LV Y +CG + +A VF M D+ MIG
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDE--MPKRDISGCVVMIGA 91
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTP 278
A +G +ESLD F EM+ G+K D +LL A + L +E CL K
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYES 150
Query: 279 KSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGR-- 336
+ + ++D+ ++ G+V A + + Q + A+++G N+ + D A + +
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLV-VFNAMISGYANNSQADEALNLVKDM 209
Query: 337 KLIELEP 343
KL+ ++P
Sbjct: 210 KLLGIKP 216
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 237 bits (605), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 216/385 (56%), Gaps = 5/385 (1%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G++ D T+ L K+ + L G +HG + + G+ + ++ +Y+S + +A
Sbjct: 97 GIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDA 156
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+KVFD + +N+V WN M+ G+ GD+ +F M E+ ++SW+ +I + G
Sbjct: 157 QKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDR 216
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV-LRTSL 183
EAL +F EM G P+E T+V+VL A LG LD G+ +H + L + + +L
Sbjct: 217 EALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNAL 276
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG-VK 242
VD Y K G ++ A +FR M+ +V WN++I G A +G + +DLF M G V
Sbjct: 277 VDFYCKSGDLEAATAIFRK--MQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVA 334
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQ 301
P+E T+L +L+ C++ G V+ F + + + ++EHY MVD+M+R+G++ EA++
Sbjct: 335 PNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFK 394
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
FL +P+ A+M G+LL+ C +HG + LAE +L+++EP G YV LSN+YA R
Sbjct: 395 FLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGR 454
Query: 362 WDKARSMREAMERMGVKKSPGYSFV 386
W +R M++ ++KS G S +
Sbjct: 455 WQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 37/263 (14%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
IH ++ + + I + S + A +VF I N++ +N+M+ Y+ G
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG- 81
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
P E+L+ F M+ G +E T +L +
Sbjct: 82 -----------PPL-------------------ESLSFFSSMKSRGIWADEYTYAPLLKS 111
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
C+ L L G+ +H +I +R +V++Y G + +A VF M +V
Sbjct: 112 CSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDE--MSERNVV 169
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
+WN MI GF G V+ L LF +M + +++ +++S+ + G +EA F +
Sbjct: 170 VWNLMIRGFCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCGRDREALELFCEM 225
Query: 272 GKNGMTPKSEHYACMVDVMARAG 294
G P ++ + A G
Sbjct: 226 IDQGFDPDEATVVTVLPISASLG 248
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/426 (33%), Positives = 225/426 (52%), Gaps = 16/426 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR + PD TF + KA G+ IH I K+G S+ V SLI MYS
Sbjct: 432 MLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 490
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A K+ + VS G + ++ + ++ +SW+ +I GYV K
Sbjct: 491 IEEAEKIHSRFFQRANVS-----------GTMEELEKMHNKRLQEMCVSWNSIISGYVMK 539
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
++A +F M G P++ T +VL CA+L + G+ +H VI EL + +
Sbjct: 540 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 599
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++LVDMY+KCG + ++ +F L + D WN+MI G+A HG +E++ LF M +
Sbjct: 600 STLVDMYSKCGDLHDSRLMFEKSLRR--DFVTWNAMICGYAHHGKGEEAIQLFERMILEN 657
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
+KP+ +T++++L ACAH GL+ + +F + ++ G+ P+ HY+ MVD++ ++G+V A
Sbjct: 658 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 717
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNH-GKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
+ + ++P + + LL C H +++AE L+ L+P Y LSNVYA
Sbjct: 718 LELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYAD 777
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
W+K +R M +KK PG S+VE+ LH F+ DK+HP E+IY LG I S+
Sbjct: 778 AGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSE 837
Query: 419 MKHIVD 424
MK D
Sbjct: 838 MKPFDD 843
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 131/230 (56%), Gaps = 2/230 (0%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
ELG H ++ +G+ FV N L+ +Y++ RD +A VFD +P++++VSWN M++GY
Sbjct: 23 ELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGY 82
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
+K D+ A F++MP +DV+SW+ ++ GY++ G+ +++ VF +M G + + T
Sbjct: 83 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 142
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
+L C+ L G +H V+ +V ++L+DMYAK E+L VF+ G+ +
Sbjct: 143 IILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ-GIPE 201
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+ V W+++I G + L+ +L F EM V + Y ++L +CA
Sbjct: 202 KNSV-SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+ LD YAKC ++ A+ +FD + S++ +I GY ++ +AL +F + SG
Sbjct: 278 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 337
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+E+++ V ACA + L +G ++ I + L L + + + +DMY KC A+ EA V
Sbjct: 338 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 397
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F M+ D WN++I +G E+L LF M ++PDE T+ ++L AC GG
Sbjct: 398 FDE--MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GG 454
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ + K+GM S ++D+ ++ G + EA
Sbjct: 455 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 494
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 139/305 (45%), Gaps = 41/305 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G+ D TF + K + L LG+ IHG + + G ++D +++L+ MY+ +
Sbjct: 129 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 188
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +VF GIP KN VSW S +I G V+
Sbjct: 189 FVESLRVFQGIPEKNSVSW-------------------------------SAIIAGCVQN 217
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
AL F+EM+ ++ SVL +CA L L G +H + + ++ ++R
Sbjct: 218 NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVR 277
Query: 181 TSLVDMYAKCGAIQEALHVFRS--GLMKPSDVFIWNSMIGGFAC--HGLVKESLDLFSEM 236
T+ +DMYAKC +Q+A +F + L + S +N+MI G++ HG ++L LF +
Sbjct: 278 TATLDMYAKCDNMQDAQILFDNSENLNRQS----YNAMITGYSQEEHGF--KALLLFHRL 331
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
G+ DEI+ + ACA + E + K+ ++ +D+ + +
Sbjct: 332 MSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQAL 391
Query: 297 AEAYQ 301
AEA++
Sbjct: 392 AEAFR 396
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 147/298 (49%), Gaps = 35/298 (11%)
Query: 70 GIPVKNLVSW-----NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
G+ +K+ +S N+ +D Y KC ++ A +VFD M +D +SW+ +I + + G
Sbjct: 364 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGY 423
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
E L +F M S +P+E T S+L AC G+L G +H ++ + + + SL+
Sbjct: 424 ETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLI 482
Query: 185 DMYAKCGAIQEALHVFR--------SGLMKPSD----------VFIWNSMIGGFACHGLV 226
DMY+KCG I+EA + SG M+ + WNS+I G+
Sbjct: 483 DMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQS 542
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAH---GGLVKEAWYFFDCLGKNGMTPKSEHY 283
+++ LF+ M +G+ PD+ TY +L CA+ GL K+ + K +S+ Y
Sbjct: 543 EDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ--IHAQVIKKE---LQSDVY 597
Query: 284 AC--MVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
C +VD+ ++ G + ++ + + + ++ A++ G +HGK + A + ++I
Sbjct: 598 ICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 654
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 34/211 (16%)
Query: 152 CAHLGALDKGRMMH-HYVIDNELPLTLVLR------------------------------ 180
CA GAL+ G+ H H +I P T VL
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+++ Y+K + +A F +M DV WNSM+ G+ +G +S+++F +M G
Sbjct: 76 NKMINGYSKSNDMFKANSFF--NMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 133
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
++ D T+ +L C+ + + G + ++D+ A+ + E+
Sbjct: 134 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+ IP + + S A++ GC+ + L LA
Sbjct: 194 RVFQGIPEKNSVS-WSAIIAGCVQNNLLSLA 223
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 215/412 (52%), Gaps = 34/412 (8%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD TF F K+ + L IHG + ++G+ D V+ SL+ YS+
Sbjct: 105 PDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSAN--------- 155
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
G + +A +VFD MP +D++SW+ +I + G +++AL
Sbjct: 156 ----------------------GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
++++ M G + T+V++L +CAH+ AL+ G M+H D + + +L+DMY
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMY 253
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AKCG+++ A+ VF M+ DV WNSMI G+ HG E++ F +M GV+P+ IT
Sbjct: 254 AKCGSLENAIGVFNG--MRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAIT 311
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
+L LL C+H GLVKE F+ + +TP +HY CMVD+ RAGQ+ + + +
Sbjct: 312 FLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYAS 371
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
+ LL C H L+L E +KL++LE G YV ++++Y+
Sbjct: 372 SCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFA 431
Query: 367 SMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
SMR+ + ++ PG+S++E+ +H+FV DK HP S IY LG ++++
Sbjct: 432 SMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINR 483
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV D T L + A + +G+ +H ES FVSN+LI MY+ + NA
Sbjct: 203 GVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENA 262
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
VF+G+ +++++WNSM+ GY G
Sbjct: 263 IGVFNGMRKRDVLTWNSMIIGYGV-------------------------------HGHGV 291
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--TS 182
EA++ F +M SG +PN +T + +L C+H G + +G + H ++ ++ LT ++
Sbjct: 292 EAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEG-VEHFEIMSSQFHLTPNVKHYGC 350
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+VD+Y + G ++ +L + + D +W +++G H
Sbjct: 351 MVDLYGRAGQLENSLEMIYASSCHE-DPVLWRTLLGSCKIH 390
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 206/388 (53%), Gaps = 36/388 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R V PD + P + KA+ + LG +H + G+ D F + I +Y
Sbjct: 108 MVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLY----- 162
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
K G+ AR+VFD PE+ + SW+ +I G
Sbjct: 163 --------------------------CKAGEFENARKVFDENPERKLGSWNAIIGGLNHA 196
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID--NELPLTLV 178
G +EA+ +F +M+ SG +P++ TMVSV +C LG L +H V+ E ++
Sbjct: 197 GRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIM 256
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ SL+DMY KCG + A H+F M+ +V W+SMI G+A +G E+L+ F +M
Sbjct: 257 MLNSLIDMYGKCGRMDLASHIFEE--MRQRNVVSWSSMIVGYAANGNTLEALECFRQMRE 314
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVA 297
GV+P++IT++ +LSAC HGGLV+E +F + + P HY C+VD+++R GQ+
Sbjct: 315 FGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EA + + ++P++P + G L+ GC G +++AE V ++ELEP DG YV L+NVYA
Sbjct: 375 EAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYA 434
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSF 385
+ W +R+ M+ V K P YS+
Sbjct: 435 LRGMWKDVERVRKLMKTKKVAKIPAYSY 462
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 212/381 (55%), Gaps = 33/381 (8%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD T P + +A + + + G IH K G+ S FVS++L+ MY
Sbjct: 111 VRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY---------- 160
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
G + AR++FD MP +D + ++ + GYV++G+
Sbjct: 161 ---------------------VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAML 199
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
LA+F EM SG + V MVS+L AC LGAL G+ +H + I L L L ++ D
Sbjct: 200 GLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITD 259
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY KC + A VF + M DV W+S+I G+ G V S LF EM G++P+
Sbjct: 260 MYVKCSILDYAHTVFVN--MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNA 317
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
+T+L +LSACAHGGLV+++W +F + + + P+ +HYA + D M+RAG + EA +FL
Sbjct: 318 VTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLED 377
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKA 365
+P++P +++GA+L+GC +G +++ E V R+LI+L+P + YV L+ +Y+ R+D+A
Sbjct: 378 MPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEA 437
Query: 366 RSMREAMERMGVKKSPGYSFV 386
S+R+ M+ + K PG S +
Sbjct: 438 ESLRQWMKEKQISKVPGCSSI 458
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 75 NLVSWNSMLDGYAKCGDI-SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
N+V + ++ Y+K + + VF MP +++ SW+ +I + R G +++ +F M
Sbjct: 46 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 105
Query: 134 -RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
R S +P++ T+ +L AC+ G ++H + +L + ++LV MY G
Sbjct: 106 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 165
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ A +F M D ++ +M GG+ G L +F EM G D + ++LL
Sbjct: 166 LLHARKLFDD--MPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 223
Query: 253 SACAHGGLVK 262
AC G +K
Sbjct: 224 MACGQLGALK 233
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 211/385 (54%), Gaps = 13/385 (3%)
Query: 60 DIPNARKVFD-----GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLI 114
D+ RK + G+ + VS +++D Y KC A VF +P +DV+SW LI
Sbjct: 260 DLEQGRKTHELAIRKGLETEVKVS-TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALI 318
Query: 115 DGYVRKGDYDEALAVFEEMRV-SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
G+ G ++ F M + + +P+ + MV VL +C+ LG L++ + H YVI
Sbjct: 319 SGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF 378
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+ SLV++Y++CG++ A VF +K D +W S+I G+ HG ++L+ F
Sbjct: 379 DSNPFIGASLVELYSRCGSLGNASKVFNGIALK--DTVVWTSLITGYGIHGKGTKALETF 436
Query: 234 SEM-HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMA 291
+ M VKP+E+T+L++LSAC+H GL+ E F + + + P EHYA +VD++
Sbjct: 437 NHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLG 496
Query: 292 RAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVG 351
R G + A + ++P PT +LG LL C H ++AETV +KL ELE + G Y+
Sbjct: 497 RVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYML 556
Query: 352 LSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMM 411
+SNVY + W+ +R ++++ G+KK S +E+ +HRFVA D+ HP E +Y +
Sbjct: 557 MSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGL 616
Query: 412 LGFIVSQMKHIVDYENQEYYFYDNE 436
L + MK D EN Y+ Y+ +
Sbjct: 617 LKELDLHMKE--DLENCVYFEYEGD 639
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 155/323 (47%), Gaps = 35/323 (10%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD +T L A L LG +HG++ + G+ +D SL+
Sbjct: 140 VTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL----SLV------------- 182
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
NS+L+ YAK A +F ++ E+DV+SWS +I YV+ G E
Sbjct: 183 --------------NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 228
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL VF +M G +PN T++ VL ACA L++GR H I L + + T+LVD
Sbjct: 229 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 288
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPD 244
MY KC + +EA VF + DV W ++I GF +G+ S++ FS M + +PD
Sbjct: 289 MYMKCFSPEEAYAVFSR--IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 346
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
I + +L +C+ G +++A F + K G A +V++ +R G + A +
Sbjct: 347 AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 406
Query: 305 QIPIQPTASMLGALLNGCMNHGK 327
I ++ T + +L+ G HGK
Sbjct: 407 GIALKDTV-VWTSLITGYGIHGK 428
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 156/328 (47%), Gaps = 36/328 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITK-AGYESDRFVSNSLIHMYSSFR 59
M R PD+ T P KA L + G IHG++ K SD +V +SLI+MY
Sbjct: 32 MFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMY---- 87
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
KCG + A ++FD + + D+++WS ++ G+ +
Sbjct: 88 ---------------------------IKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 120 KGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
G +A+ F M S P+ VT+++++ AC L GR +H +VI L
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L SL++ YAK A +EA+++F+ ++ DV W+++I + +G E+L +F++M
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFK--MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD 238
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
G +P+ T L +L ACA +++ + + G+ + + +VD+ + E
Sbjct: 239 DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEE 298
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHG 326
AY +IP + S + AL++G +G
Sbjct: 299 AYAVFSRIPRKDVVSWV-ALISGFTLNG 325
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
M ++ + W+ L+ R+ ++E L F M KP+ T+ L AC L ++ G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 162 RMMHHYV-IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
M+H +V D L L + +SL+ MY KCG + EAL +F L KP D+ W+SM+ GF
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE-LEKP-DIVTWSSMVSGF 118
Query: 221 ACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSACA 256
+G ++++ F M + V PD +T + L+SAC
Sbjct: 119 EKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 155
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 32/192 (16%)
Query: 33 HGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDI 92
H Y+ K G++S+ F+ SL+ +YS + NA KVF+GI +K+ V W S++ GY G
Sbjct: 370 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 429
Query: 93 SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCAC 152
+ A + F+ M ++ S KPNEVT +S+L AC
Sbjct: 430 TKALETFNHM------------------------------VKSSEVKPNEVTFLSILSAC 459
Query: 153 AHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
+H G + +G R+ V D L L LVD+ + G + A+ + + P+
Sbjct: 460 SHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQ- 518
Query: 212 IWNSMIGGFACH 223
I +++G H
Sbjct: 519 ILGTLLGACRIH 530
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 216/373 (57%), Gaps = 5/373 (1%)
Query: 17 AKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL 76
++ S +L R L +H I K E D + +L+ Y + +AR VF+ + +N+
Sbjct: 147 SRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENV 206
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY-DEALAVFEEMRV 135
V SM+ GY G + A ++F+ +D++ ++ +++G+ R G+ ++ ++ M+
Sbjct: 207 VCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQR 266
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
+G PN T SV+ AC+ L + + G+ +H ++ + + + + +SL+DMYAKCG I +
Sbjct: 267 AGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIND 326
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
A VF M+ +VF W SMI G+ +G +E+L+LF+ M ++P+ +T+L LSAC
Sbjct: 327 ARRVFDQ--MQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSAC 384
Query: 256 AHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
+H GLV + + F+ + ++ M PK EHYAC+VD+M RAG + +A++F +P +P + +
Sbjct: 385 SHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDI 444
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIELEP-HQDGRYVGLSNVYAIFRRWDKARSMREAME 373
ALL+ C HG ++LA +L +L + G Y+ LSNVYA +WD +RE M+
Sbjct: 445 WAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMK 504
Query: 374 RMGVKKSPGYSFV 386
R + K+ G S+
Sbjct: 505 RRRISKTIGRSWT 517
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 112/252 (44%), Gaps = 33/252 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G P+ TF + A + L E+G +H I K+G + + +SL+ MY+
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG 323
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +AR+VFD + KN+ SW SM+DGY K G+ PE
Sbjct: 324 INDARRVFDQMQEKNVFSWTSMIDGYGKNGN-----------PE---------------- 356
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVL 179
EAL +F M+ +PN VT + L AC+H G +DKG + D + +
Sbjct: 357 ----EALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+VD+ + G + +A R+ +P D IW +++ HG V+ + SE+ +
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERP-DSDIWAALLSSCNLHGNVELASIAASELFKL 471
Query: 240 GVKPDEITYLNL 251
YL L
Sbjct: 472 NADKRPGAYLAL 483
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 138/312 (44%), Gaps = 71/312 (22%)
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
KCG +S ARQVFD +P+ + +++ +I GY++ G E L + + M SG K + T+
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 148 VLCACAHLGA---LDKG--RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR- 201
VL A G+ L + R++H +I ++ L VL T+LVD Y K G ++ A VF
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 202 -------------SGLM---------------KPSDVFIWNSMIGGFACHG-LVKESLDL 232
SG M K D+ ++N+M+ GF+ G K S+D+
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 233 FSEMHIVGVKPDEITYLNLLSACA-----------HGGLVKEAWY------------FFD 269
+ M G P+ T+ +++ AC+ H ++K Y +
Sbjct: 261 YISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAK 320
Query: 270 CLGKNG-------MTPKSE-HYACMVDVMARAGQVAEAYQFLCQIP---IQPT-ASMLGA 317
C G N M K+ + M+D + G EA + ++ I+P + LGA
Sbjct: 321 CGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGA 380
Query: 318 LLNGCMNHGKLD 329
L+ C + G +D
Sbjct: 381 -LSACSHSGLVD 391
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 218/376 (57%), Gaps = 18/376 (4%)
Query: 80 NSMLDGYAKCGD--ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVS 136
N++LD YAK G+ +++AR++FD + ++D +S++ ++ Y + G +EA VF + +
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
N +T+ +VL A +H GAL G+ +H VI L +++ TS++DMY KCG ++ A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
F MK +V W +MI G+ HG ++L+LF M GV+P+ IT++++L+AC+
Sbjct: 342 RKAFDR--MKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 257 HGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASML 315
H GL E W +F+ + G+ G+ P EHY CMVD++ RAG + +AY + ++ ++P + +
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 316 GALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERM 375
+LL C H ++LAE +L EL+ G Y+ LS++YA RW +R M+
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 376 GVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML----------GFI--VSQMKHIV 423
G+ K PG+S +E++G +H F+ D+ HP E+IY L G++ S + H V
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDV 579
Query: 424 DYENQEYYFYDNEGKL 439
D E +E + KL
Sbjct: 580 DEEEKEMTLRVHSEKL 595
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 155/329 (47%), Gaps = 31/329 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M ++ ++P +FP KA + L G H GY+SD FVS++LI MYS+
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +ARKVFD IP +N+VSW SM+ GY G+ A +F +D+L V +
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLF-----KDLL---------VDE 172
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
D D+A+ + + + +VSV+ AC+ + A +H +VI + +
Sbjct: 173 NDDDDAMFL-----------DSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221
Query: 181 TSLVDMYAKC--GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+L+D YAK G + A +F + K D +NS++ +A G+ E+ ++F +
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDK--DRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 239 VGVKP-DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
V + IT +L A +H G ++ D + + G+ ++D+ + G+V
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHG 326
A + ++ + S A++ G HG
Sbjct: 340 TARKAFDRMKNKNVRSWT-AMIAGYGMHG 367
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+++ S++D Y KCG + AR+ FD M ++V SW+ +I GY G +AL +F M
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
SG +PN +T VSVL AC+H G +G R + + L +VD+ + G +
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
Q+A + + MKP D IW+S++ H V+
Sbjct: 441 QKAYDLIQRMKMKP-DSIIWSSLLAACRIHKNVE 473
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 134/326 (41%), Gaps = 47/326 (14%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
+ + DV SW+ +I R GD EAL F MR P + + AC+ L + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ H + + ++L+ MY+ CG +++A VF + ++ W SMI G+
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDE--IPKRNIVSWTSMIRGYD 153
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLN------LLSACA-----------HGGLVKEA 264
+G +++ LF ++ + D+ +L+ ++SAC+ H ++K
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 265 W--------YFFDCLGKNG--------------MTPKSEHYACMVDVMARAGQVAEAYQF 302
+ D K G + Y ++ V A++G EA++
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 303 LCQI----PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
++ + A L +L + G L + + + ++I + +D VG S + +
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTS-IIDM 331
Query: 359 FRRWDKARSMREAMERMGVKKSPGYS 384
+ + + + R+A +RM K ++
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWT 357
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 190/334 (56%), Gaps = 3/334 (0%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
++++D Y KC + A+ VFD M +++V+SW+ ++ GY + G +EA+ +F +M+ SG
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ T+ + ACA++ +L++G H I + L + + SLV +Y KCG I ++ +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F M D W +M+ +A G E++ LF +M G+KPD +T ++SAC+ G
Sbjct: 429 FNE--MNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 260 LVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
LV++ +F + G+ P HY+CM+D+ +R+G++ EA +F+ +P P A L
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 319 LNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
L+ C N G L++ + LIEL+PH Y LS++YA +WD +R M VK
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606
Query: 379 KSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
K PG S+++ G LH F A D+S P +QIY L
Sbjct: 607 KEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKL 640
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 153/287 (53%), Gaps = 3/287 (1%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
LG IHG + K G+ES V + L++MY++ I +A+KVF G+ +N V +NS++ G
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
CG I A Q+F M E+D +SW+ +I G + G EA+ F EM+V G K ++
Sbjct: 216 LACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
SVL AC LGA+++G+ +H +I + + ++L+DMY KC + A VF MK
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR--MK 332
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
+V W +M+ G+ G +E++ +F +M G+ PD T +SACA+ ++E
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
F +G+ +V + + G + ++ + ++ ++ S
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS 439
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 35/272 (12%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
IHG I +A + F+ N+++H Y+ + AR+VFD IP NL SWN++L Y+K G
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE-MRVSGPKPNEVTMVSVLC 150
IS F+ +P++D ++W+ LI+GY G A+ + MR VT++++L
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK--------------------- 189
+ G + G+ +H VI L++ + L+ MYA
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 190 ----------CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
CG I++AL +FR G+ K D W +MI G A +GL KE+++ F EM +
Sbjct: 208 YNSLMGGLLACGMIEDALQLFR-GMEK--DSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
G+K D+ + ++L AC G + E C+
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 43/259 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G+ PDH T A A + E G HG +G VSNSL+ +Y D
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I ++ ++F+ + V++ VSW +M+ YA+ G R V
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFG-----RAV---------------------- 454
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPL 175
E + +F++M G KP+ VT+ V+ AC+ G ++KG+ M Y I +P
Sbjct: 455 ----ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGI---VP- 506
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
++ + ++D++++ G ++EA+ F +G+ P D W +++ AC + ++
Sbjct: 507 SIGHYSCMIDLFSRSGRLEEAMR-FINGMPFPPDAIGWTTLLS--ACRNKGNLEIGKWAA 563
Query: 236 MHIVGVKPDEITYLNLLSA 254
++ + P LLS+
Sbjct: 564 ESLIELDPHHPAGYTLLSS 582
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 190/317 (59%), Gaps = 6/317 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+L + N+++D Y KC +S A +VF + ++D +SW+ +I G V EA+ +F M+
Sbjct: 238 SLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQ 297
Query: 135 VS-GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
S G KP+ + SVL ACA LGA+D GR +H Y++ + + T++VDMYAKCG I
Sbjct: 298 TSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYI 357
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
+ AL +F ++ +VF WN+++GG A HG ESL F EM +G KP+ +T+L L+
Sbjct: 358 ETALEIFNG--IRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALN 415
Query: 254 ACAHGGLVKEAWYFFDCLGKN--GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
AC H GLV E +F + + PK EHY CM+D++ RAG + EA + + +P++P
Sbjct: 416 ACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPD 475
Query: 312 ASMLGALLNGCMNHGKL-DLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMRE 370
+ GA+L+ C N G L +L + + +++E G YV LSN++A RRWD +R
Sbjct: 476 VRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRR 535
Query: 371 AMERMGVKKSPGYSFVE 387
M+ G+ K PG S++E
Sbjct: 536 LMKVKGISKVPGSSYIE 552
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 149/323 (46%), Gaps = 38/323 (11%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD TFP + KA G IHG +TK G+ D +V NSL+H Y
Sbjct: 101 GFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFY--------- 151
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
CG+ A +VF MP +DV+SW+ +I G+ R G Y
Sbjct: 152 ----------------------GVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL F +M V +PN T V VL + +G L G+ +H ++ ++L +L+
Sbjct: 190 EALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI-VGVKP 243
DMY KC + +A+ VF G ++ D WNSMI G KE++DLFS M G+KP
Sbjct: 247 DMYVKCEQLSDAMRVF--GELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
D ++LSACA G V + + + G+ + +VD+ A+ G + A +
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 304 CQIPIQPTASMLGALLNGCMNHG 326
I + + ALL G HG
Sbjct: 365 NGIRSKNVFTW-NALLGGLAIHG 386
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 13/212 (6%)
Query: 37 TKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNS-----MLDGYAKCGD 91
T +G + D + S++ +S + + R V + I + W++ ++D YAKCG
Sbjct: 298 TSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG-IKWDTHIGTAIVDMYAKCGY 356
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
I A ++F+ + ++V +W+ L+ G G E+L FEEM G KPN VT ++ L A
Sbjct: 357 IETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNA 416
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLR--TSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
C H G +D+GR H + E L L ++D+ + G + EAL + ++ +KP D
Sbjct: 417 CCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKP-D 475
Query: 210 VFIWNSMIGGFACHG----LVKESLDLFSEMH 237
V I +++ G L KE LD F ++
Sbjct: 476 VRICGAILSACKNRGTLMELPKEILDSFLDIE 507
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 5/206 (2%)
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
S++ L+ Y + ++ +G P+ T V AC + +G+ +H
Sbjct: 72 FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGI 131
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
V + ++ SLV Y CG + A VF G M DV W +I GF GL K
Sbjct: 132 VTKMGFYDDIYVQNSLVHFYGVCGESRNACKVF--GEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
E+LD FS+M V+P+ TY+ +L + G + + K E ++
Sbjct: 190 EALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 288 DVMARAGQVAEAYQFLCQIPIQPTAS 313
D+ + Q+++A + ++ + S
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKKDKVS 272
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 218/419 (52%), Gaps = 47/419 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ PD + L ++ G A HG V NSL+ MY F
Sbjct: 322 MQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGT-----------VCNSLLSMYCKFEL 370
Query: 61 IPNARKVFDGIPVK-NLVSWNSMLDGYA-------------------------------- 87
+ A K+F I + N +WN+ML GY
Sbjct: 371 LSVAEKLFCRISEEGNKEAWNTMLKGYGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYG 430
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
K GD+++A ++F + +V++W+ +I YV ++A+A+F+ M KP+ +T+V+
Sbjct: 431 KMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVT 489
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L AC + G+L++G+M+H Y+ + E + L L +L+DMYAKCG ++++ +F +G K
Sbjct: 490 LLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK- 548
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
D WN MI G+ HG V+ ++ LF +M VKP T+L LLSAC H GLV++
Sbjct: 549 -DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKL 607
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
F + + + P +HY+C+VD+++R+G + EA + +P P + G LL+ CM HG+
Sbjct: 608 FLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 667
Query: 328 LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
++ + + + +P DG Y+ L+N+Y+ +W++A RE M GV K G+S V
Sbjct: 668 FEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 726
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 129/271 (47%), Gaps = 37/271 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITK-AGYESDRFVSNSLIHMYSSFR 59
ML G PDH T P + A A LL +G +HG + K G++ + V S ++ YS
Sbjct: 116 MLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYS--- 172
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
KCG + A VFD MP++DV++W+ +I G+V+
Sbjct: 173 ----------------------------KCGFLQDACLVFDEMPDRDVVAWTAIISGHVQ 204
Query: 120 KGDYDEALAVFEEMRVSGP---KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
G+ + L +M +G KPN T+ AC++LGAL +GR +H + + N L +
Sbjct: 205 NGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASS 264
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+++S+ Y+K G EA FR + D+F W S+I A G ++ES D+F EM
Sbjct: 265 KFVQSSMFSFYSKSGNPSEAYLSFRE--LGDEDMFSWTSIIASLARSGDMEESFDMFWEM 322
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
G+ PD + L++ LV + F
Sbjct: 323 QNKGMHPDGVVISCLINELGKMMLVPQGKAF 353
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 9/284 (3%)
Query: 23 LLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP--NARKVFDGIPVKNLVSWN 80
LLK L + + + + DR +S L S + NA + G+ +N+ +
Sbjct: 5 LLKPNLVVTLRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLS-ENIFVAS 63
Query: 81 SMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
++ YA G +++ +VF L+ +D+ W+ +I + GDY +L F M +SG P
Sbjct: 64 KLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSP 123
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+ T V+ ACA L G +H V+ + + S V Y+KCG +Q+A V
Sbjct: 124 DHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLV 183
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV---KPDEITYLNLLSACA 256
F M DV W ++I G +G + L +MH G KP+ T AC+
Sbjct: 184 FDE--MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACS 241
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ G +KE KNG+ + M +++G +EAY
Sbjct: 242 NLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY 285
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 220/398 (55%), Gaps = 14/398 (3%)
Query: 36 ITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL---VSWNSMLDGYAKCGDI 92
+ K E D + S++ S + + +++ I K L V N ++D Y KC ++
Sbjct: 441 VAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNM 500
Query: 93 SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCAC 152
A +VF+ + +DV+SW+ +I G+ EA+ +F M +G + V ++ +L A
Sbjct: 501 GYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAA 560
Query: 153 AHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF----RSGLMKPS 208
A L AL+KGR +H Y++ L + ++VDMYA CG +Q A VF R GL++
Sbjct: 561 ASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQ-- 618
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
+ SMI + HG K +++LF +M V PD I++L LL AC+H GL+ E F
Sbjct: 619 ----YTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFL 674
Query: 269 DCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ + P EHY C+VD++ RA V EA++F+ + +PTA + ALL C +H +
Sbjct: 675 KIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE 734
Query: 328 LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
++ E ++L+ELEP G V +SNV+A RW+ +R M+ G++K PG S++E
Sbjct: 735 KEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 794
Query: 388 MHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDY 425
M G +H+F A DKSHP S++IY L + +++ V Y
Sbjct: 795 MDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGY 832
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 130/278 (46%), Gaps = 47/278 (16%)
Query: 2 LRVGVFPDHLT-FPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+RV P L+ FP L KA A L G +H + K GY S F+ N+L+ MY
Sbjct: 136 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMY----- 190
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-DVLSWSCLIDGYVR 119
AK D+S AR++FD E+ D + W+ ++ Y
Sbjct: 191 --------------------------AKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 224
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT-LV 178
G E L +F EM ++GP PN T+VS L AC G+ +H V+ + + L
Sbjct: 225 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 284
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ +L+ MY +CG + +A + R M +DV WNS+I G+ + + KE+L+ FS+M
Sbjct: 285 VCNALIAMYTRCGKMPQAERILRQ--MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 342
Query: 239 VGVKPDEITYLNLLSACA-----------HGGLVKEAW 265
G K DE++ ++++A H ++K W
Sbjct: 343 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 380
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 15/252 (5%)
Query: 68 FDGIPVK-----NLVSWNSMLDGYAK----CGDISMARQ--VFDLMPEQDVLSWSCLIDG 116
FDG+ + ++ NS ++ +A CG Q VFD MP++ +W+ +I
Sbjct: 60 FDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGA 119
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
YV G+ ALA++ MRV G + ++L ACA L + G +H ++ T
Sbjct: 120 YVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST 179
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ +LV MYAK + A +F G + D +WNS++ ++ G E+L+LF EM
Sbjct: 180 GFIVNALVSMYAKNDDLSAARRLF-DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM 238
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC--MVDVMARAG 294
H+ G P+ T ++ L+AC K + K+ T SE Y C ++ + R G
Sbjct: 239 HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS-THSSELYVCNALIAMYTRCG 297
Query: 295 QVAEAYQFLCQI 306
++ +A + L Q+
Sbjct: 298 KMPQAERILRQM 309
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++ Y +CG + A ++ M DV++W+ LI GYV+ Y EAL F +M +G K
Sbjct: 287 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 346
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+EV+M S++ A L L G +H YVI + L + +L+DMY+KC ++
Sbjct: 347 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL---TCYM 403
Query: 200 FRSGL-MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
R+ L M D+ W ++I G+A + E+L+LF ++ ++ DE+ ++L A +
Sbjct: 404 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 461
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 34/249 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G D ++ + AS L G+ +H Y+ K G++S+ V N+LI M
Sbjct: 340 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM------ 393
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
Y+KC + F M ++D++SW+ +I GY +
Sbjct: 394 -------------------------YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 428
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ EAL +F ++ + +E+ + S+L A + L ++ + +H +++ L L V++
Sbjct: 429 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQ 487
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
LVD+Y KC + A VF S +K DV W SMI A +G E+++LF M G
Sbjct: 488 NELVDVYGKCRNMGYATRVFES--IKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG 545
Query: 241 VKPDEITYL 249
+ D + L
Sbjct: 546 LSADSVALL 554
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ D + + A+A L G IH Y+ + G+ + ++ +++ MY+ D
Sbjct: 541 MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 600
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A+ VFD I K L+ + SM++ Y G A ++FD M ++V
Sbjct: 601 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV------------- 647
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPL 175
P+ ++ +++L AC+H G LD+GR M H Y ++ P
Sbjct: 648 ------------------SPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELE-PWPE 688
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
V LVDM + + EA + +P+ +W +++ AC ++ + +
Sbjct: 689 HYV---CLVDMLGRANCVVEAFEFVKMMKTEPT-AEVWCALLA--ACRSHSEKEIGEIAA 742
Query: 236 MHIVGVKPDEITYLNLLS 253
++ ++P L L+S
Sbjct: 743 QRLLELEPKNPGNLVLVS 760
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 215/412 (52%), Gaps = 34/412 (8%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
DH+T+ L S L + G +H K+G D VSN+LI MY
Sbjct: 407 DHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY------------- 453
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
AKCG++ + ++F M D ++W+ +I VR GD+ L
Sbjct: 454 ------------------AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
V +MR S P+ T + L CA L A G+ +H ++ L + +L++MY+
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
KCG ++ + VF M DV W MI + +G +++L+ F++M G+ PD + +
Sbjct: 556 KCGCLENSSRVFER--MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ ++ AC+H GLV E F+ + + + P EHYAC+VD+++R+ ++++A +F+ +P
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARS 367
I+P AS+ ++L C G ++ AE V R++IEL P G + SN YA R+WDK
Sbjct: 674 IKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSL 733
Query: 368 MREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+R++++ + K+PGYS++E+ +H F + D S P SE IY L + S M
Sbjct: 734 IRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLM 785
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 168/341 (49%), Gaps = 35/341 (10%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD TFP + KA A L E+G ++ I G+ESD FV N+L+ MYS
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYS--------- 152
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+ G ++ ARQVFD MP +D++SW+ LI GY G Y+E
Sbjct: 153 ----------------------RMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL ++ E++ S P+ T+ SVL A +L + +G+ +H + + + + +V+ LV
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY K +A VF M D +N+MI G+ +V+ES+ +F E ++ KPD
Sbjct: 251 MYLKFRRPTDARRVFDE--MDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDL 307
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
+T ++L AC H + A Y ++ + K G +S ++DV A+ G + A
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
+ + T S ++++G + G L A + + ++ +E D
Sbjct: 368 MECKDTVSW-NSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 8/221 (3%)
Query: 41 YESDRFVSNSLIHMYSSFRDIPNARKVFD-----GIPVKNLVSWNSMLDGYAKCGDISMA 95
++ D +S++ RD+ A+ +++ G +++ V N ++D YAKCGD+ A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR-NILIDVYAKCGDMITA 361
Query: 96 RQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
R VF+ M +D +SW+ +I GY++ GD EA+ +F+ M + + + +T + ++ L
Sbjct: 362 RDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL 421
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNS 215
L G+ +H I + + + L + +L+DMYAKCG + ++L +F S M D WN+
Sbjct: 422 ADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSS--MGTGDTVTWNT 479
Query: 216 MIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+I G L + ++M V PD T+L L CA
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 34/256 (13%)
Query: 10 HLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFD 69
++ PF+++A + IH + G +S F S LI YS FR+ ++ VF
Sbjct: 4 RVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFR 63
Query: 70 GI-PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
+ P KN+ WNS++ ++K G L P EAL
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNG----------LFP---------------------EALE 92
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+ ++R S P++ T SV+ ACA L + G +++ ++D L + +LVDMY+
Sbjct: 93 FYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYS 152
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
+ G + A VF M D+ WNS+I G++ HG +E+L+++ E+ + PD T
Sbjct: 153 RMGLLTRARQVFDE--MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTV 210
Query: 249 LNLLSACAHGGLVKEA 264
++L A + +VK+
Sbjct: 211 SSVLPAFGNLLVVKQG 226
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 44/267 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + V PD TF A L + LG IH + + GYES+ + N+LI MYS
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC 559
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ N+ +VF+ + +++V+W M+ Y
Sbjct: 560 LENSSRVFERMSRRDVVTWTGMIYAYGM-------------------------------Y 588
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPL 175
G+ ++AL F +M SG P+ V ++++ AC+H G +D+G +M HY ID P+
Sbjct: 589 GEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKID---PM 645
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
+ +VD+ ++ I +A ++ +KP D IW S++ G + E+ + S
Sbjct: 646 -IEHYACVVDLLSRSQKISKAEEFIQAMPIKP-DASIWASVLRACRTSGDM-ETAERVSR 702
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVK 262
I+ + PD+ Y ++L++ A+ L K
Sbjct: 703 -RIIELNPDDPGY-SILASNAYAALRK 727
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 228/437 (52%), Gaps = 38/437 (8%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD T L A + L LG +HG+I + E D FV
Sbjct: 491 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV----------------- 533
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+ S+L Y CG++ + +FD M ++ ++SW+ +I GY++ G D
Sbjct: 534 --------------YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPD 579
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
AL VF +M + G + ++M+ V AC+ L +L GR H Y + + L + SL+
Sbjct: 580 RALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLI 639
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAK G+I ++ VF +K WN+MI G+ HGL KE++ LF EM G PD
Sbjct: 640 DMYAKNGSITQSSKVFNG--LKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPD 697
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
++T+L +L+AC H GL+ E + D + + G+ P +HYAC++D++ RAGQ+ +A + +
Sbjct: 698 DLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVV 757
Query: 304 C-QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRW 362
++ + + +LL+ C H L++ E V KL ELEP + YV LSN+YA +W
Sbjct: 758 AEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKW 817
Query: 363 DKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQI---YMMLGFIVSQM 419
+ R +R+ M M ++K G S++E++ + FV ++ E+I + +L +S+M
Sbjct: 818 EDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKM 877
Query: 420 KHIVDYENQEYYFYDNE 436
+ D + ++ + E
Sbjct: 878 GYRPDTMSVQHDLSEEE 894
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 128/254 (50%), Gaps = 31/254 (12%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ PDH T+P + KA A + +GLA+HG + K G D FV N+L+ Y + + +A
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 242
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
++FD +P +NLVSWNSM+ ++ G + + F L+ E
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNG---FSEESFLLLGE--------------------- 278
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
+ EE P+ T+V+VL CA + G+ +H + + L LVL +L+D
Sbjct: 279 ---MMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMD 335
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG--VKP 243
MY+KCG I A +F+ + +V WN+M+GGF+ G + D+ +M G VK
Sbjct: 336 MYSKCGCITNAQMIFK--MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393
Query: 244 DEITYLNLLSACAH 257
DE+T LN + C H
Sbjct: 394 DEVTILNAVPVCFH 407
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 132/258 (51%), Gaps = 11/258 (4%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
V N + N+ + YAKCG +S A++VF + + V SW+ LI G+ + D +L +
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M++SG P+ T+ S+L AC+ L +L G+ +H ++I N L L + S++ +Y CG
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ +F + M+ + WN++I G+ +G +L +F +M + G++ I+ + +
Sbjct: 547 LCTVQALFDA--MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 604
Query: 253 SACA---HGGLVKEAWYFFDCLGKNGMTPKSEHYAC-MVDVMARAGQVAEAYQFLCQIPI 308
AC+ L +EA + + AC ++D+ A+ G + ++ + +
Sbjct: 605 GACSLLPSLRLGREAHAY----ALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 660
Query: 309 QPTASMLGALLNGCMNHG 326
+ TAS A++ G HG
Sbjct: 661 KSTASW-NAMIMGYGIHG 677
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 7/177 (3%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVT 144
YA CG +R VFD + +++ W+ +I Y R YDE L F EM + P+ T
Sbjct: 130 YAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFT 189
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
V+ ACA + + G +H V+ L + + +LV Y G + +AL +F +
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF--DI 247
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV----GVKPDEITYLNLLSACAH 257
M ++ WNSMI F+ +G +ES L EM PD T + +L CA
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS------VLCACAHLGALDKGRMMHHY 167
I + GD D++ +E ++ ++ +L A ++ GR +H
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 168 VI-DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
V L VL T ++ MYA CG+ ++ VF + ++ ++F WN++I ++ + L
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA--LRSKNLFQWNAVISSYSRNELY 167
Query: 227 KESLDLFSEM-HIVGVKPDEITYLNLLSACA 256
E L+ F EM + PD TY ++ ACA
Sbjct: 168 DEVLETFIEMISTTDLLPDHFTYPCVIKACA 198
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 218/405 (53%), Gaps = 36/405 (8%)
Query: 21 ACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVS 78
+C L R+ G H K G+ SD ++ +SL+ +Y RD
Sbjct: 129 SCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLY---RD------------------ 167
Query: 79 WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
G++ A +VF+ MPE++V+SW+ +I G+ ++ D L ++ +MR S
Sbjct: 168 ----------SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS 217
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PN+ T ++L AC GAL +GR +H + L L + SL+ MY KCG +++A
Sbjct: 218 DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR 277
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS-EMHIVGVKPDEITYLNLLSACAH 257
+F DV WNSMI G+A HGL ++++LF M G KPD ITYL +LS+C H
Sbjct: 278 IFDQ--FSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRH 335
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
GLVKE FF+ + ++G+ P+ HY+C+VD++ R G + EA + + +P++P + + G+
Sbjct: 336 AGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGS 395
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGV 377
LL C HG + + + LEP +V L+N+YA W +A ++R+ M+ G+
Sbjct: 396 LLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGL 455
Query: 378 KKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
K +PG S++E++ + F A D S+ +I +L ++ M+ +
Sbjct: 456 KTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHMEFL 500
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 121/255 (47%), Gaps = 36/255 (14%)
Query: 13 FPFLAKASACLLKRELG--LAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
+ F A SAC LG ++H G +S +SNSLI MY D+ +A ++FD
Sbjct: 222 YTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQ 281
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
K++VSWNSM+ GYA+ G A ++F+LM
Sbjct: 282 FSNKDVVSWNSMIAGYAQHGLAMQAIELFELM---------------------------- 313
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
M SG KP+ +T + VL +C H G + +GR + + ++ L L + LVD+ +
Sbjct: 314 --MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRF 371
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD-EITYL 249
G +QEAL + + MKP+ V IW S++ HG V + E + ++PD T++
Sbjct: 372 GLLQEALELIENMPMKPNSV-IWGSLLFSCRVHGDVWTGIRAAEERLM--LEPDCAATHV 428
Query: 250 NLLSACAHGGLVKEA 264
L + A G KEA
Sbjct: 429 QLANLYASVGYWKEA 443
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 177/305 (58%), Gaps = 3/305 (0%)
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
D++ W+ +I GYV+KG E L ++ +MR + P++ T SV AC+ L L+ G+ H
Sbjct: 157 DLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAH 216
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL 225
+I + +++ ++LVDMY KC + + VF + +V W S+I G+ HG
Sbjct: 217 AVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQ--LSTRNVITWTSLISGYGYHGK 274
Query: 226 VKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYA 284
V E L F +M G +P+ +T+L +L+AC HGGLV + W F + ++ G+ P+ +HYA
Sbjct: 275 VSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYA 334
Query: 285 CMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPH 344
MVD + RAG++ EAY+F+ + P + + G+LL C HG + L E K +EL+P
Sbjct: 335 AMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPT 394
Query: 345 QDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPS 404
G YV +N YA + A +R ME GVKK PGYS +E+ G +HRF+ D SH
Sbjct: 395 NGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRL 454
Query: 405 SEQIY 409
SE+IY
Sbjct: 455 SEKIY 459
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ PD TF + +A + L + E G H + K +S+ V ++L+ MY
Sbjct: 189 IVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMY---------- 238
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KC S +VFD + ++V++W+ LI GY G E
Sbjct: 239 ---------------------FKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSE 277
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--TSL 183
L FE+M+ G +PN VT + VL AC H G +DKG H Y + + + + ++
Sbjct: 278 VLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAM 336
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
VD + G +QEA K +W S++G HG VK
Sbjct: 337 VDTLGRAGRLQEAYEFVMKSPCKEHPP-VWGSLLGACRIHGNVK 379
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 231/424 (54%), Gaps = 36/424 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G D++T L A++ L +E+G H ++ + G + + +++ LI MYS
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGL 468
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I ++K+F+G GYA E+D +W+ +I GY +
Sbjct: 469 IRISQKLFEG-------------SGYA----------------ERDQATWNSMISGYTQN 499
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++ VF +M +PN VT+ S+L AC+ +G++D G+ +H + I L + +
Sbjct: 500 GHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVA 559
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++LVDMY+K GAI+ A +F K + + +MI G+ HG+ + ++ LF M G
Sbjct: 560 SALVDMYSKAGAIKYAEDMFSQ--TKERNSVTYTTMILGYGQHGMGERAISLFLSMQESG 617
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEA 299
+KPD IT++ +LSAC++ GL+ E F+ + + + P SEHY C+ D++ R G+V EA
Sbjct: 618 IKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEA 677
Query: 300 YQFLCQIPIQPT-ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD--GRYVGLSNVY 356
Y+F+ + + A + G+LL C HG+L+LAETV +L + + ++ G V LSN+Y
Sbjct: 678 YEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMY 737
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIV 416
A ++W +R M G+KK G S +E+ G ++ FV+ D+ HP S +IY ++ +
Sbjct: 738 AEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLA 797
Query: 417 SQMK 420
M+
Sbjct: 798 KDMR 801
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 153/329 (46%), Gaps = 49/329 (14%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ D +T+ A A + L + ELG HG+++K +FR++P
Sbjct: 314 IVSDEVTYLLAASAVSALQQVELGRQFHGFVSK------------------NFRELP--- 352
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+V NS++ Y++CG + + VF M E+DV+SW+ +I +V+ G DE
Sbjct: 353 ----------IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDE 402
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
L + EM+ G K + +T+ ++L A ++L + G+ H ++I + + + L+D
Sbjct: 403 GLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLID 461
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY+K G I+ + +F D WNSMI G+ +G +++ +F +M ++P+
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY--------ACMVDVMARAGQVA 297
+T ++L AC+ G V LGK Y + +VD+ ++AG +
Sbjct: 522 VTVASILPACSQIGSVD--------LGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIK 573
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHG 326
A Q + + + +L G HG
Sbjct: 574 YAEDMFSQTKERNSVTYTTMIL-GYGQHG 601
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 34/271 (12%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D T+ KA A + G A+H ++ + S R V NSL++MY S + P+
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD----- 160
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
C + + R+VFD M ++V++W+ LI YV+ G EA
Sbjct: 161 --------------------CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACR 200
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID--NELPLTLVLRTSLVDM 186
F M KP+ V+ V+V A + ++ K + + ++ +E L + +S + M
Sbjct: 201 QFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISM 260
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK---P 243
YA+ G I+ + VF S + + ++ +WN+MIG + + + ES++LF + +G K
Sbjct: 261 YAELGDIESSRRVFDSCVER--NIEVWNTMIGVYVQNDCLVESIELF--LEAIGSKEIVS 316
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
DE+TYL SA + V+ F + KN
Sbjct: 317 DEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
S S L + G+ +ARQ+FD +P+ + W+ +I G++ EAL + M+ +
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 138 PKPN--EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
P N T S L ACA L G+ +H ++I + V+ SL++MY C +
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 196 ALH--VFRSGL--MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
V R M+ +V WN++I + G E+ F M + VKP ++++N+
Sbjct: 161 CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNV 220
Query: 252 LSACAHGGLVKEAWYFFDCLGKNG 275
A + +K+A F+ + K G
Sbjct: 221 FPAVSISRSIKKANVFYGLMLKLG 244
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 191/347 (55%), Gaps = 3/347 (0%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
+ D N++I Y + +A +F +P ++ SWN M+ GYA G++ +AR F+
Sbjct: 309 DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEK 368
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
PE+ +SW+ +I Y + DY EA+ +F M + G KP+ T+ S+L A L L G
Sbjct: 369 TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLG 428
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
MH V+ +P + + +L+ MY++CG I E+ +F +K +V WN+MIGG+A
Sbjct: 429 MQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLK-REVITWNAMIGGYA 486
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA-WYFFDCLGKNGMTPKS 280
HG E+L+LF M G+ P IT++++L+ACAH GLV EA F + + P+
Sbjct: 487 FHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQM 546
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
EHY+ +V+V + GQ EA + +P +P ++ GALL+ C + + LA +
Sbjct: 547 EHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSR 606
Query: 341 LEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
LEP YV L N+YA WD+A +R ME +KK G S+V+
Sbjct: 607 LEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 179/383 (46%), Gaps = 52/383 (13%)
Query: 25 KRELGLAIH-GYITKA-----GYESDRFVS-NSLIHMYSSFRDIPNARKVFDGIPVKNLV 77
+EL I GYI +A E+ V+ N++I Y R++ ARK+FD +P +++V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 78 SWNSMLDGYAKCGDISM---ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+WN+M+ GY CG I AR++FD MP +D SW+ +I GY + EAL +FE+M
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKM- 162
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV-IDNELPLTLVLRTSLVDMYAKCGAI 193
P+ N V+ +++ G +D ++ + + + PL +LV K +
Sbjct: 163 ---PERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPL-----CALVAGLIKNERL 214
Query: 194 QEALHV---FRSGLMKPSD-VFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVK------ 242
EA V + S + D V+ +N++I G+ G V+ + LF ++ + G
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 243 ----PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
+ +++ +++ A G V A FD + + M+D ++ +
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS----WNTMIDGYVHVSRMED 330
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A+ ++P + S +++G + G ++LA R E P + V +++ A
Sbjct: 331 AFALFSEMPNRDAHS-WNMMVSGYASVGNVELA----RHYFEKTPEK--HTVSWNSIIAA 383
Query: 359 FRRWDKARSMREAME---RMGVK 378
+ +K + +EA++ RM ++
Sbjct: 384 Y---EKNKDYKEAVDLFIRMNIE 403
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 46/267 (17%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD T L AS L+ LG+ +H + K D V N+LI MYS +I +
Sbjct: 404 GEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMES 462
Query: 65 RKVFDGIPVK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
R++FD + +K +++WN+M+ GYA G+ S
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNAS------------------------------ 492
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPLTLV 178
EAL +F M+ +G P+ +T VSVL ACAH G +D+ + MM Y I+ ++
Sbjct: 493 -EALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHY-- 549
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+SLV++ + G +EA+++ S +P D +W +++ AC L + +
Sbjct: 550 --SSLVNVTSGQGQFEEAMYIITSMPFEP-DKTVWGALLD--ACRIYNNVGLAHVAAEAM 604
Query: 239 VGVKPDEIT-YLNLLSACAHGGLVKEA 264
++P+ T Y+ L + A GL EA
Sbjct: 605 SRLEPESSTPYVLLYNMYADMGLWDEA 631
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 231/490 (47%), Gaps = 78/490 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD T+ F+ A A L + +G ++H + K G E D +++SLI MY+ + A
Sbjct: 123 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 182
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ------------------- 105
RK+FD I ++ VSWNSM+ GY++ G A +F M E+
Sbjct: 183 RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHL 242
Query: 106 --------------------DVLSWSCLIDGYVRKGDYDEALAVFE-------------- 131
S LI Y + GD D A VF
Sbjct: 243 GDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMI 302
Query: 132 -----------------EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
EM +G P+ T+ +VL AC +GAL+ G+ + + + L
Sbjct: 303 TVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQ 362
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+ + T LVDMY KCG ++EAL VF + M + WN+MI +A G KE+L LF
Sbjct: 363 HNIYVATGLVDMYGKCGRVEEALRVFEA--MPVKNEATWNAMITAYAHQGHAKEALLLFD 420
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEA-WYFFDCLGKNGMTPKSEHYACMVDVMARA 293
M V P +IT++ +LSAC H GLV + YF + G+ PK EHY ++D+++RA
Sbjct: 421 RM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 477
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIEL-EPHQDGRYVGL 352
G + EA++F+ + P +P ML A+L C + + E R L+E+ E G YV
Sbjct: 478 GMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVIS 537
Query: 353 SNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVA-HDKSHPSSEQIYMM 411
SNV A + WD++ MR M GV K+PG S++E+ G L F+A D E +
Sbjct: 538 SNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSL 597
Query: 412 LGFIVSQMKH 421
+V +MK
Sbjct: 598 FDLLVEEMKR 607
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 38/224 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + GV PD T + A + ELG I + ++ + + +V+ L+ MY
Sbjct: 321 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGR 380
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A +VF+ +PVKN +WN+M+ YA +
Sbjct: 381 VEEALRVFEAMPVKNEATWNAMITAYA-------------------------------HQ 409
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVL 179
G EAL +F+ M V P+++T + VL AC H G + +G R H L +
Sbjct: 410 GHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEH 466
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
T+++D+ ++ G + EA KP ++ + +++G ACH
Sbjct: 467 YTNIIDLLSRAGMLDEAWEFMERFPGKPDEIML-AAILG--ACH 507
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 233/448 (52%), Gaps = 44/448 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLK--RELGLAIHGYITKAGYES---DRFVSNSLIHMYSSFR 59
V P+ T LA A L R LG +H + G+E+ D ++ SL+HMY+S
Sbjct: 294 AVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSG 353
Query: 60 -----------------------------DIPNARKVFDGI-PVKNLVSWNSMLDGYAKC 89
D+ A +F+ + + + VSW SM+DGY +
Sbjct: 354 LIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEA 413
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
GD+S A +F + ++D ++W+ +I G V+ + EA ++ +M G KP T +L
Sbjct: 414 GDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL 473
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLT--LVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+ LD+G+ +H + L+L+ SLV MYAKCGAI++A +F + K
Sbjct: 474 SSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK- 532
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
D WNSMI G + HGL ++L+LF EM G KP+ +T+L +LSAC+H GL+
Sbjct: 533 -DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Query: 268 FDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC-MNH 325
F + + + P +HY M+D++ RAG++ EA +F+ +P P ++ GALL C +N
Sbjct: 592 FKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNW 651
Query: 326 GKLD---LAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPG 382
D +AE +L+EL+P +V L NVYA R D + MR+ M GVKK+PG
Sbjct: 652 RDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPG 711
Query: 383 YSFVEMHGALHRFVAHDKSHPSSEQIYM 410
S+V ++G + F++ DKS + Q+ +
Sbjct: 712 CSWVVVNGRANVFLSGDKSASEAAQMVL 739
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 39/293 (13%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N++I Y + A+ +F + KN+V+W SM+ GY + GD+ A ++F MPE++++
Sbjct: 204 NAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV 263
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMR--VSGPKPNEVTMVSVLCACAHLGALDK--GRMM 164
SW+ +I G+ Y EAL +F EM+ V PN T++S+ AC LG + G +
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQL 323
Query: 165 HHYVIDNELPLTL---VLRTSLVDMYAKCGAIQEALHVFRSGL-MKPSDVFI-------- 212
H VI N L SLV MYA G I A + ++ ++ I
Sbjct: 324 HAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGD 383
Query: 213 -------------------WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
W SMI G+ G V + LF ++H D +T+ ++S
Sbjct: 384 LERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH----DKDGVTWTVMIS 439
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
L EA + + G+ P + Y+ ++ + + C I
Sbjct: 440 GLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVI 492
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 150/315 (47%), Gaps = 37/315 (11%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E + N+++ Y R + A +F +P KN+VSW ML G A ++FD
Sbjct: 105 ERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDE 163
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE++V+SW+ L+ G +R GD ++A VF+ M P + V+ +++ +++
Sbjct: 164 MPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM----PSRDVVSWNAMIKGYIENDGMEEA 219
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+++ + + +V TS+V Y + G ++EA +F M ++ W +MI GFA
Sbjct: 220 KLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCE--MPERNIVSWTAMISGFA 273
Query: 222 CHGLVKESLDLFSEMH--IVGVKPDEITYLNLLSACA-------------HGGLVKEAWY 266
+ L +E+L LF EM + V P+ T ++L AC H ++ W
Sbjct: 274 WNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWE 333
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
D +G KS +V + A +G +A A L + + ++ ++N + +G
Sbjct: 334 TVD---HDGRLAKS-----LVHMYASSGLIASAQSLLNESFDLQSCNI---IINRYLKNG 382
Query: 327 KLDLAETVGRKLIEL 341
L+ AET+ ++ L
Sbjct: 383 DLERAETLFERVKSL 397
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 25/212 (11%)
Query: 64 ARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
AR + D IP + +V W S+L YAK G + AR +F++MPE+++++ + ++ GYV+
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVK 120
Query: 120 KGDYDEALAVFEEMRVSGPKP--NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP-LT 176
+EA +F EM PK + M++ LC D GR + +E+P
Sbjct: 121 CRRMNEAWTLFREM----PKNVVSWTVMLTALC--------DDGRSEDAVELFDEMPERN 168
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+V +LV + G +++A VF + M DV WN+MI G+ + ++E+ LF +M
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDA--MPSRDVVSWNAMIKGYIENDGMEEAKLLFGDM 226
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
+ + +T+ +++ G V+EA+ F
Sbjct: 227 S----EKNVVTWTSMVYGYCRYGDVREAYRLF 254
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 43/225 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITK--AGYESDRFVSNSLIHMYSSF 58
M+R G+ P + T+ L ++ + G IH I K A Y+ D + NSL+ MY+
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKC 516
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
I +A ++F + K+ VSWNSM I G
Sbjct: 517 GAIEDAYEIFAKMVQKDTVSWNSM-------------------------------IMGLS 545
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNEL 173
G D+AL +F+EM SG KPN VT + VL AC+H G + +G M Y I +
Sbjct: 546 HHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGI 605
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIG 218
+ S++D+ + G ++EA F S L D ++ +++G
Sbjct: 606 DHYI----SMIDLLGRAGKLKEA-EEFISALPFTPDHTVYGALLG 645
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 208/390 (53%), Gaps = 37/390 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M V + P+ +T + + ELG ++HG K G D V+N+L+HMY
Sbjct: 334 MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMY----- 387
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKC A+ VF++ E+D+++W+ +I G+ +
Sbjct: 388 --------------------------AKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQN 421
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL--PLTLV 178
G EAL +F M PN VT+ S+ ACA LG+L G +H Y + ++
Sbjct: 422 GSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVH 481
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ T+L+D YAKCG Q A +F + ++ + W++MIGG+ G SL+LF EM
Sbjct: 482 VGTALLDFYAKCGDPQSARLIFDT--IEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLK 539
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVA 297
KP+E T+ ++LSAC H G+V E +F + K+ TP ++HY CMVD++ARAG++
Sbjct: 540 KQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE 599
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
+A + ++PIQP GA L+GC H + DL E V +K+++L P YV +SN+YA
Sbjct: 600 QALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYA 659
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVE 387
RW++A+ +R M++ G+ K G+S +E
Sbjct: 660 SDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 130/239 (54%), Gaps = 6/239 (2%)
Query: 22 CLLKRELGLA-IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV---FDGIPVKNLV 77
CL K + + ++ + K G+ D V + + + +D+ N +K+ +P + V
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV 177
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
+LD YAKCG+I A +VF+ + ++V+ W+ +I GYV+ +E L +F MR +
Sbjct: 178 VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENN 237
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
NE T +++ AC L AL +G+ H ++ + + L+ L TSL+DMY KCG I A
Sbjct: 238 VLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNAR 297
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
VF D+ +W +MI G+ +G V E+L LF +M V +KP+ +T ++LS C
Sbjct: 298 RVFNE--HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCG 354
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 114/199 (57%), Gaps = 8/199 (4%)
Query: 66 KVFDGIPVKNLVSWNS-----MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
K F G VK+ + +S +LD Y KCGDIS AR+VF+ D++ W+ +I GY
Sbjct: 262 KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 321
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EAL++F++M+ KPN VT+ SVL C + L+ GR +H I + T V
Sbjct: 322 GSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV-A 380
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+LV MYAKC ++A +VF + D+ WNS+I GF+ +G + E+L LF M+
Sbjct: 381 NALVHMYAKCYQNRDAKYVFE--MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSES 438
Query: 241 VKPDEITYLNLLSACAHGG 259
V P+ +T +L SACA G
Sbjct: 439 VTPNGVTVASLFSACASLG 457
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 144/317 (45%), Gaps = 43/317 (13%)
Query: 33 HGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDI 92
HG +T G D ++ L+ +Y F GY K
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFF--------------------------GYTK---- 93
Query: 93 SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCAC 152
AR VFD +PE D W ++ Y + E + +++ + G + +++ L AC
Sbjct: 94 -DARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKAC 152
Query: 153 AHLGALDKGRMMHHYVIDNELP-LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
L LD G+ +H ++ ++P V+ T L+DMYAKCG I+ A VF ++ +V
Sbjct: 153 TELQDLDNGKKIHCQLV--KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR--NVV 208
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
W SMI G+ + L +E L LF+ M V +E TY L+ AC + + +F CL
Sbjct: 209 CWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCL 268
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP----IQPTASMLGALLNGCMNHGK 327
K+G+ S ++D+ + G ++ A + + + TA ++G NG +N
Sbjct: 269 VKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA- 327
Query: 328 LDLAETVGRKLIELEPH 344
L L + + K +E++P+
Sbjct: 328 LSLFQKM--KGVEIKPN 342
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 209/410 (50%), Gaps = 34/410 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ D + A A L + G IH +G+ SD N+L+ +YS
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS---- 637
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+CG I + F+ D ++W+ L+ G+ +
Sbjct: 638 ---------------------------RCGKIEESYLAFEQTEAGDNIAWNALVSGFQQS 670
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ +EAL VF M G N T S + A + + +G+ +H + +
Sbjct: 671 GNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC 730
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+ MYAKCG+I +A F + + WN++I ++ HG E+LD F +M
Sbjct: 731 NALISMYAKCGSISDAEKQFLE--VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
V+P+ +T + +LSAC+H GLV + +F+ + G++PK EHY C+VD++ RAG ++ A
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 848
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+F+ ++PI+P A + LL+ C+ H +++ E L+ELEP YV LSN+YA+
Sbjct: 849 KEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVS 908
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIY 409
++WD R+ M+ GVKK PG S++E+ ++H F D++HP +++I+
Sbjct: 909 KKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 958
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 144/321 (44%), Gaps = 34/321 (10%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ P+ T+P + K L ELG IH I K ++ + +V + LI MY
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY---------- 535
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
AK G + A + +DV+SW+ +I GY + D+
Sbjct: 536 ---------------------AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK 574
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL F +M G + +EV + + + ACA L AL +G+ +H + L + +LV
Sbjct: 575 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVT 634
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
+Y++CG I+E+ F + D WN+++ GF G +E+L +F M+ G+ +
Sbjct: 635 LYSRCGKIEESYLAFEQ--TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 692
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
T+ + + A + +K+ + K G ++E ++ + A+ G +++A + +
Sbjct: 693 FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 306 IPIQPTASMLGALLNGCMNHG 326
+ + S A++N HG
Sbjct: 753 VSTKNEVSW-NAIINAYSKHG 772
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 162/354 (45%), Gaps = 36/354 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G+ P F + A + E+G +HG + K G+ SD +V N+L+ +Y +
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A +F + ++ V++N++++G ++C GY K
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQC--------------------------GYGEK 372
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
A+ +F+ M + G +P+ T+ S++ AC+ G L +G+ +H Y +
Sbjct: 373 -----AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+++YAKC I+ AL F + +V +WN M+ + ++ S +F +M I
Sbjct: 428 GALLNLYAKCADIETALDYFLE--TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 485
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ P++ TY ++L C G ++ + K + + ++D+ A+ G++ A+
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 545
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
L + + S ++ G + D A T R++++ D VGL+N
Sbjct: 546 DILIRFAGKDVVSWT-TMIAGYTQYNFDDKALTTFRQMLDRGIRSDE--VGLTN 596
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 33/296 (11%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD T L A + G +H Y TK G+ S+ + +L+++Y
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY--------- 434
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
AKC DI A F ++V+ W+ ++ Y D
Sbjct: 435 ----------------------AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLR 472
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+ +F +M++ PN+ T S+L C LG L+ G +H +I L + + L+
Sbjct: 473 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLI 532
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAK G + A + K DV W +MI G+ + ++L F +M G++ D
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGK--DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
E+ N +SACA +KE +G + +V + +R G++ E+Y
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 3/246 (1%)
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
AR ++ G+ +V N ++D Y++ G + +AR+VFD + +D SW +I G +
Sbjct: 211 ARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EA+ +F +M V G P SVL AC + +L+ G +H V+ + +L
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
V +Y G + A H+F + M D +N++I G + G +++++LF MH+ G++P
Sbjct: 330 VSLYFHLGNLISAEHIFSN--MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
D T +L+ AC+ G + K G ++ ++++ A+ + A +
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 304 CQIPIQ 309
+ ++
Sbjct: 448 LETEVE 453
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 109/255 (42%), Gaps = 39/255 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKR---ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
G+ P+H T +L + CL + G +H I K G +S+ +S L
Sbjct: 79 GIRPNHQTLKWLLEG--CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL---------- 126
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
D Y GD+ A +VFD MPE+ + +W+ +I +
Sbjct: 127 ---------------------FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG-ALDKGRMMHHYVIDNELPLTLVLR 180
E +F M PNE T VL AC A D +H ++ L + V+
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 225
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
L+D+Y++ G + A VF ++ D W +MI G + + E++ LF +M+++G
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDG--LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 241 VKPDEITYLNLLSAC 255
+ P + ++LSAC
Sbjct: 284 IMPTPYAFSSVLSAC 298
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 194/337 (57%), Gaps = 4/337 (1%)
Query: 54 MYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCL 113
MY ++ +A KVFD +P +N V+WN M+ G GD A + MP + V+SW+ +
Sbjct: 1 MYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTI 60
Query: 114 IDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
IDGY R EA+ +F M KPNE+T++++L A +LG L +H YV
Sbjct: 61 IDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRG 120
Query: 173 -LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
+P + + SL+D YAKCG IQ A F ++ W +MI FA HG+ KE++
Sbjct: 121 FVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVS 180
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW--YFFDCLGKNGMTPKSEHYACMVDV 289
+F +M +G+KP+ +T +++L+AC+HGGL +E + +F + + +TP +HY C+VD+
Sbjct: 181 MFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDM 240
Query: 290 MARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRY 349
+ R G++ EA + +IPI+ A + LL C + +LAE V RKL+ELE G Y
Sbjct: 241 LRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDY 300
Query: 350 VGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
V +SN++ R+ A+ R+ M+ GV K PG+S V
Sbjct: 301 VLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 337
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 207/407 (50%), Gaps = 42/407 (10%)
Query: 54 MYSSFRDIPNARKVFDGIPVKNLVSWNSMLDG---------------------------- 85
MY +P AR VFD + KN+V+WNS++ G
Sbjct: 1 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 60
Query: 86 -------YAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
YA G A V M E+ +V+SW+ + G + G++ AL VF +M+
Sbjct: 61 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 120
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
G PN TM ++L L L G+ +H + + L + T+LVDMY K G +Q
Sbjct: 121 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 180
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
A+ +F +K + WN M+ G+A G +E + FS M G++PD IT+ ++LS
Sbjct: 181 SAIEIFWG--IKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSV 238
Query: 255 CAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
C + GLV+E W +FD + + G+ P EH +CMVD++ R+G + EA+ F+ + ++P A+
Sbjct: 239 CKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDAT 298
Query: 314 MLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAME 373
+ GA L+ C H L+LAE ++L LEPH Y+ + N+Y+ RW+ +R M
Sbjct: 299 IWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMR 358
Query: 374 RMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
V+ +S++++ +H F A K+HP IY L +VS+MK
Sbjct: 359 NNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMK 405
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV P+ T L K CL G +HG+ + D +V+ +L+ MY D
Sbjct: 119 MQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGD 178
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A ++F GI K+L SWN ML GYA G +
Sbjct: 179 LQSAIEIFWGIKNKSLASWNCMLMGYAMFG-----------------------------R 209
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPL 175
G +E +A F M +G +P+ +T SVL C + G + +G M Y I +P
Sbjct: 210 G--EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGI---IP- 263
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
T+ + +VD+ + G + EA ++ +KP D IW + + H
Sbjct: 264 TIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKP-DATIWGAFLSSCKIH 310
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 213/389 (54%), Gaps = 10/389 (2%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVF-----DGIPVKNLVSWNSMLDGYAKCGDISM 94
G+ DR V L+ D R V G+P+ N+V S++D YAK G I +
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPM-NVVVETSLVDMYAKVGFIEV 270
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A +VF M + +SW LI G+ + G ++A EM+ G +P+ VT+V VL AC+
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQ 330
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
+G+L GR++H Y++ + L V T+L+DMY+KCGA+ + +F + D+ WN
Sbjct: 331 VGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEH--VGRKDLVCWN 387
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC-LGK 273
+MI + HG +E + LF +M ++PD T+ +LLSA +H GLV++ ++F + K
Sbjct: 388 TMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINK 447
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
+ P +HY C++D++ARAG+V EA + + + ALL+GC+NH L + +
Sbjct: 448 YKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDI 507
Query: 334 VGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALH 393
K+++L P G +SN +A +W + +R+ M ++K PGYS +E++G L
Sbjct: 508 AANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELR 567
Query: 394 RFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
F+ D SH + +L + ++++ +
Sbjct: 568 TFLMEDLSHHEHYHMLQVLRNLKTEIRDV 596
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 127/262 (48%), Gaps = 33/262 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + PD TF KA L E G A+ GY++D FV +S++++Y
Sbjct: 107 MIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLY----- 161
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG + A +F M ++DV+ W+ ++ G+ +
Sbjct: 162 --------------------------MKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQA 195
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +A+ + EM+ G + V M+ +L A LG GR +H Y+ LP+ +V+
Sbjct: 196 GKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVE 255
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSLVDMYAK G I+ A VF + K + W S+I GFA +GL ++ + EM +G
Sbjct: 256 TSLVDMYAKVGFIEVASRVFSRMMFKTA--VSWGSLISGFAQNGLANKAFEAVVEMQSLG 313
Query: 241 VKPDEITYLNLLSACAHGGLVK 262
+PD +T + +L AC+ G +K
Sbjct: 314 FQPDLVTLVGVLVACSQVGSLK 335
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 134/277 (48%), Gaps = 10/277 (3%)
Query: 71 IPVKNLVSWNSM-LDGYAKCG---DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
I NL++ +S+ D A CG +IS AR+VFD +P++ V ++ +I Y R + DE
Sbjct: 41 ISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEV 100
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
L ++++M +P+ T + AC L+KG + +D + + +S++++
Sbjct: 101 LRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNL 160
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
Y KCG + EA +F G M DV W +M+ GFA G ++++ + EM G D +
Sbjct: 161 YMKCGKMDEAEVLF--GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRV 218
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
L LL A G K L + G+ +VD+ A+ G + A + ++
Sbjct: 219 VMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM 278
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP 343
+ TA G+L++G +G LA ++E++
Sbjct: 279 MFK-TAVSWGSLISGFAQNG---LANKAFEAVVEMQS 311
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 199/349 (57%), Gaps = 4/349 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NL NS+LD Y +CG +S A+ F M ++D+++W+ LI + + D EAL +F+
Sbjct: 247 NLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRFE 305
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
G PN T S++ ACA++ AL+ G+ +H + + L +L+DMYAKCG I
Sbjct: 306 SQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIP 365
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
++ VF ++ ++ W SM+ G+ HG E+++LF +M G++PD I ++ +LSA
Sbjct: 366 DSQRVF-GEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSA 424
Query: 255 CAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
C H GLV++ +F+ + + G+ P + Y C+VD++ RAG++ EAY+ + ++P +P S
Sbjct: 425 CRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDES 484
Query: 314 MLGALLNGCMNHGKLDL-AETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAM 372
GA+L C H L + RK++EL+P G YV LS +YA +W +R+ M
Sbjct: 485 TWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMM 544
Query: 373 ERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKH 421
MG KK G S++ + + F DK P++ +Y +LG ++ + +
Sbjct: 545 RMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETRE 593
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 138/327 (42%), Gaps = 35/327 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR- 59
M++ G P+ T + K+ + G +HG + K G E +V N++++MY++
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ A +F I VKN V+ W+ LI G+
Sbjct: 162 TMEAACLIFRDIKVKNDVT-------------------------------WTTLITGFTH 190
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
GD L ++++M + + + + A A + ++ G+ +H VI L +
Sbjct: 191 LGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPV 250
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
S++D+Y +CG + EA H F M+ D+ WN++I E+L +F
Sbjct: 251 MNSILDLYCRCGYLSEAKHYFHE--MEDKDLITWNTLISELE-RSDSSEALLMFQRFESQ 307
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
G P+ T+ +L++ACA+ + + + G E ++D+ A+ G + ++
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDS 367
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHG 326
+ +I + +++ G +HG
Sbjct: 368 QRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P K+ + +++ Y + G + AR +FD MP++DV++W+ +I GY A F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
EM G PNE T+ SVL +C ++ L G ++H V+ + +L + ++++MYA C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
EA + + +DV W ++I GF G L ++ +M + +
Sbjct: 161 VTMEAACLIFRDIKVKNDV-TWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA 219
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ A A V + K G ++D+ R G ++EA +
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYF 271
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 36/222 (16%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G P+ TF L A A + G +HG I + G+ + ++N+LI MY+ +IP++
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDS 367
Query: 65 RKVFDGI-PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
++VF I +NLVSW SM+ GY G
Sbjct: 368 QRVFGEIVDRRNLVSWTSMMIGYGS-------------------------------HGYG 396
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT--LVLRT 181
EA+ +F++M SG +P+ + ++VL AC H G ++KG + + V+++E + +
Sbjct: 397 AEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKG-LKYFNVMESEYGINPDRDIYN 455
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+VD+ + G I EA + KP D W +++G H
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKP-DESTWGAILGACKAH 496
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 224/424 (52%), Gaps = 42/424 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV+P+ +TF L A C + + GL IHG K G+ S+ V NS I +Y+ F + +A
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDA 426
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+K F+ + ++++SW+ +I G+ + G
Sbjct: 427 KKA-------------------------------FEDITFREIISWNAMISGFAQNGFSH 455
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLG--ALDKGRMMHHYVIDNELPLTLVLRTS 182
EAL +F + PNE T SVL A A ++ +G+ H +++ L V+ ++
Sbjct: 456 EALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSA 514
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+DMYAK G I E+ VF M + F+W S+I ++ HG + ++LF +M V
Sbjct: 515 LLDMYAKRGNIDESEKVFNE--MSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVA 572
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQ 301
PD +T+L++L+AC G+V + + F+ + + + P EHY+CMVD++ RAG++ EA +
Sbjct: 573 PDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEE 632
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
+ ++P P SML ++L C HG + + V +E++P G YV + N+YA
Sbjct: 633 LMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEE 692
Query: 362 WDKARSMREAMERMGVKKSPGYSFVEM---HGAL--HRFVAHDKSHPSSEQIYMMLGFIV 416
WDKA +R+AM + V K G+S++++ G+L F + DKSHP S++IY M+ I
Sbjct: 693 WDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIG 752
Query: 417 SQMK 420
+M
Sbjct: 753 LEMN 756
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 125/300 (41%), Gaps = 40/300 (13%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
LGL + + K G ESD V NS I MYS
Sbjct: 192 LGLQLQSTVVKTGLESDLVVGNSFITMYS------------------------------- 220
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD-EALAVFEEMRVSGPKPNEVTMV 146
+ G AR+VFD M +D++SW+ L+ G ++G + EA+ +F +M G + + V+
Sbjct: 221 RSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFT 280
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
SV+ C H L R +H I L + L+ Y+KCG ++ VF M
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ--MS 338
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
+V W +MI +++ +F M GV P+E+T++ L++A +KE
Sbjct: 339 ERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK 393
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
K G + + + A+ + +A + I + S A+++G +G
Sbjct: 394 IHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS-WNAMISGFAQNG 452
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 150/344 (43%), Gaps = 46/344 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLA--IHGYITKAGYESDRFVSNSLIHMYSSF 58
M+R GV DH++F + + C + +L LA IHG K GYES V N L+ YS
Sbjct: 267 MMREGVELDHVSFT--SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC 324
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ + VF + +N+VSW +M+
Sbjct: 325 GVLEAVKSVFHQMSERNVVSWTTMIS---------------------------------- 350
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ D+A+++F MR G PNEVT V ++ A + +G +H I
Sbjct: 351 --SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ S + +YAK A+++A F + ++ WN+MI GFA +G E+L +F
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFR--EIISWNAMISGFAQNGFSHEALKMFLSA-A 465
Query: 239 VGVKPDEITYLNLLSACAHGG--LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
P+E T+ ++L+A A VK+ L K G+ + ++D+ A+ G +
Sbjct: 466 AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNI 525
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
E+ + ++ Q + ++++ +HG + + K+I+
Sbjct: 526 DESEKVFNEMS-QKNQFVWTSIISAYSSHGDFETVMNLFHKMIK 568
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 112/260 (43%), Gaps = 42/260 (16%)
Query: 2 LRVGVFPDHL---TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
L++G F H+ T KA LKR G IHG+ T +G+ S VSN+++ MY
Sbjct: 67 LQLGYFGRHMDEVTLCLALKACRGDLKR--GCQIHGFSTTSGFTSFVCVSNAVMGMYR-- 122
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
K G A +F+ + + DV+SW+ ++ G+
Sbjct: 123 -----------------------------KAGRFDNALCIFENLVDPDVVSWNTILSGF- 152
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
D AL M+ +G + T + L C G + V+ L LV
Sbjct: 153 --DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV 210
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK-ESLDLFSEMH 237
+ S + MY++ G+ + A VF M D+ WNS++ G + G E++ +F +M
Sbjct: 211 VGNSFITMYSRSGSFRGARRVFDE--MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMM 268
Query: 238 IVGVKPDEITYLNLLSACAH 257
GV+ D +++ ++++ C H
Sbjct: 269 REGVELDHVSFTSVITTCCH 288
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 94 MARQVFDLMPEQD-VLSWSCLIDGYVRKGDYDEALAVFEE---MRVSGPKPNEVTMVSVL 149
+A ++FD +++ S + I +R+ AL++F+E + G +EVT+ L
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
AC G L +G +H + + + + +++ MY K G AL +F + L+ P D
Sbjct: 86 KACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFEN-LVDP-D 141
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
V WN+++ GF + + +L+ M GV D TY LS C
Sbjct: 142 VVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFC 184
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 215/386 (55%), Gaps = 10/386 (2%)
Query: 57 SFRDIPNARKVFDGIPVKN-----LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWS 111
+ +DI N K+ G+ VK+ L S S+L Y +C + + +VF + + +SW+
Sbjct: 279 NLKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWT 337
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
LI G V+ G + AL F +M KPN T+ S L C++L ++GR +H V
Sbjct: 338 SLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKY 397
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
+ L+D+Y KCG A VF + + DV N+MI +A +G +E+LD
Sbjct: 398 GFDRDKYAGSGLIDLYGKCGCSDMARLVFDT--LSEVDVISLNTMIYSYAQNGFGREALD 455
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMA 291
LF M +G++P+++T L++L AC + LV+E FD K+ + ++HYACMVD++
Sbjct: 456 LFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLG 515
Query: 292 RAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVG 351
RAG++ EA ++ I P + LL+ C H K+++AE + RK++E+EP +G +
Sbjct: 516 RAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLIL 574
Query: 352 LSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDK-SHPSSEQIYM 410
+SN+YA +W++ M+ M+ M +KK+P S+VE++ H F+A D SHP+SEQI
Sbjct: 575 MSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILE 634
Query: 411 MLGFIVSQMKHIVDYENQEYYFYDNE 436
L ++ + K + E++ F D E
Sbjct: 635 NLEELIKKSKDLGYVEDKSCVFQDME 660
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 142/297 (47%), Gaps = 10/297 (3%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARK-----VFDGIPVKNLVSWNSMLDGYAKCGDISMARQV 98
D + +S+ +S A++ V G+ V N+ ++++D Y K G A+ V
Sbjct: 164 DEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLV 223
Query: 99 FDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL 158
D + E+DV+ + LI GY +KG+ EA+ F+ M V +PNE T SVL +C +L +
Sbjct: 224 LDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDI 283
Query: 159 DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIG 218
G+++H ++ + L +TSL+ MY +C + ++L VF+ + P+ V W S+I
Sbjct: 284 GNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKC-IEYPNQVS-WTSLIS 341
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
G +G + +L F +M +KP+ T + L C++ + +E + K G
Sbjct: 342 GLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR 401
Query: 279 KSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAE 332
+ ++D+ + G A + L ++ + +M+ + LDL E
Sbjct: 402 DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFE 458
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
G P + +S + ++D KCGDI ARQVFD M E+ +++W+ LI ++ EA+ +
Sbjct: 95 GFPAE--ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEM 152
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV-LRTSLVDMYA 188
+ M + P+E T+ SV A + L + + H + L ++ V + ++LVDMY
Sbjct: 153 YRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYV 212
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
K G +EA V ++ DV + ++I G++ G E++ F M + V+P+E TY
Sbjct: 213 KFGKTREAKLVLDR--VEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTY 270
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ-FLC-QI 306
++L +C + + + K+G ++ + R V ++ + F C +
Sbjct: 271 ASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY 330
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
P Q + + +L++G + +G+ ++A RK++
Sbjct: 331 PNQVSWT---SLISGLVQNGREEMALIEFRKMM 360
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 33/227 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R + P+ T + + L E G IHG +TK G++ D++ + LI +Y
Sbjct: 359 MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGC 418
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AR VFD + +++S N+M+ YA+ +G+ R
Sbjct: 419 SDMARLVFDTLSEVDVISLNTMIYSYAQ--------------------------NGFGR- 451
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EAL +FE M G +PN+VT++SVL AC + +++G + +++ LT
Sbjct: 452 ----EALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHY 507
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+VD+ + G ++EA + + ++ P D+ +W +++ H V+
Sbjct: 508 ACMVDLLGRAGRLEEA-EMLTTEVINP-DLVLWRTLLSACKVHRKVE 552
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 185/318 (58%), Gaps = 5/318 (1%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
+ +L N+++ YAK G + A + F + +DV+S++ LI G V +E+ +F E
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
MR SG +P+ T++ VL AC+HL AL G H Y + + + + +L+DMY KCG
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ A VF + M D+ WN+M+ GF HGL KE+L LF+ M GV PDE+T L +L
Sbjct: 460 LDVAKRVFDT--MHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAIL 517
Query: 253 SACAHGGLVKEAWYFFDCL--GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
SAC+H GLV E F+ + G + P+ +HY CM D++ARAG + EAY F+ ++P +P
Sbjct: 518 SACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEP 577
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMRE 370
+LG LL+ C + +L V +K+ L + V LSN Y+ RW+ A +R
Sbjct: 578 DIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRM 636
Query: 371 AMERMGVKKSPGYSFVEM 388
++ G+ K+PGYS+V++
Sbjct: 637 IQKKRGLLKTPGYSWVDV 654
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 153/328 (46%), Gaps = 41/328 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML GV P T+PF+ KA A L + G IH ++ + + +D +V +L+
Sbjct: 94 MLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALV-------- 145
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
D YAKCG++ MA +VFD MP++D+++W+ +I G+
Sbjct: 146 -----------------------DFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 121 GDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+ + +F +M R+ G PN T+V + A GAL +G+ +H Y LV+
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM--- 236
+T ++D+YAK I A VF K + W++MIGG+ + ++KE+ ++F +M
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKK--NEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 237 -HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
++ V P I +L CA G + K G ++ A+ G
Sbjct: 301 DNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCM 323
+ +A++ +I ++ S +L+ GC+
Sbjct: 359 LCDAFRQFSEIGLKDVIS-YNSLITGCV 385
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 102/182 (56%), Gaps = 5/182 (2%)
Query: 86 YAKCGDISMARQVFDLMPEQDV--LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEV 143
YA C ++ +AR VFD +P + ++W +I Y ++AL ++ +M SG +P +
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
T VL ACA L A+D G+++H +V ++ + + T+LVD YAKCG ++ A+ VF
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE- 163
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHGGLVK 262
M D+ WN+MI GF+ H + + + LF +M I G+ P+ T + + A G ++
Sbjct: 164 -MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALR 222
Query: 263 EA 264
E
Sbjct: 223 EG 224
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 118/245 (48%), Gaps = 35/245 (14%)
Query: 13 FPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP 72
FP L +A A RE G A+HGY T+ G+ +D V ++ +Y+ + I AR+VFD
Sbjct: 212 FPALGRAGAL---RE-GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDF 267
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
KN V+W++M+ GY + I A +VF M D
Sbjct: 268 KKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND-------------------------- 301
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
V+ P + + +L CA G L GR +H Y + L L ++ +++ YAK G+
Sbjct: 302 -NVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ +A F +K DV +NS+I G + +ES LF EM G++PD T L +L
Sbjct: 359 LCDAFRQFSEIGLK--DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVL 416
Query: 253 SACAH 257
+AC+H
Sbjct: 417 TACSH 421
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 33/198 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ PD T + A + L G + HGY GY + + N+L+ MY+
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A++VFD + +++VSWN+ML G+ I G +
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFG--------------------------IHGLGK- 492
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EAL++F M+ +G P+EVT++++L AC+H G +D+G+ + + + + + +
Sbjct: 493 ----EALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID 548
Query: 181 --TSLVDMYAKCGAIQEA 196
+ D+ A+ G + EA
Sbjct: 549 HYNCMTDLLARAGYLDEA 566
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 20/247 (8%)
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTL-VLRTSLVDMYAKCGAIQEALHVFRSGL 204
+S+L C L G+++H +++ L L+ + +L +YA C ++ A HVF
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
+ W+ MI +A + +++LDL+ +M GV+P + TY +L ACA + +
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 265 WYFFDCLGKNGMTPKSEHYAC--MVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC 322
+ N ++ Y C +VD A+ G++ A + ++P + + A+++G
Sbjct: 123 KLIHSHV--NCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAW-NAMISGF 179
Query: 323 MNHGKLDLAETVG-----RKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGV 377
H L + +G R++ L P+ LS + +F +A ++RE G
Sbjct: 180 SLH--CCLTDVIGLFLDMRRIDGLSPN-------LSTIVGMFPALGRAGALREGKAVHGY 230
Query: 378 KKSPGYS 384
G+S
Sbjct: 231 CTRMGFS 237
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 192/326 (58%), Gaps = 23/326 (7%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR---KGDYD--EALAVFEEMR 134
++L YAK GD+ AR+VFD MPE+ ++W+ +I GY KG+++ +A+ +F
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 135 V--SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT----LVLRTSLVDMYA 188
SG +P + TMV VL A + G L+ G ++H Y+ +L T + + T+LVDMY+
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI--EKLGFTPEVDVFIGTALVDMYS 268
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
KCG + A VF LMK +VF W SM G A +G E+ +L + M G+KP+EIT+
Sbjct: 269 KCGCLNNAFSVFE--LMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITF 326
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+LLSA H GLV+E F + G+TP EHY C+VD++ +AG++ EAYQF+ +P
Sbjct: 327 TSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMP 386
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-------RYVGLSNVYAIFR 360
I+P A +L +L N C +G+ + E +G+ L+E+E + YV LSNV A
Sbjct: 387 IKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKG 446
Query: 361 RWDKARSMREAMERMGVKKSPGYSFV 386
+W + +R+ M+ +K PGYSFV
Sbjct: 447 KWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 41/226 (18%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGY--ESDRFVSNSLIHMYSSFRDIP 62
GV P T + A + E+G +HGYI K G+ E D F+ +L+ MYS +
Sbjct: 215 GVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLN 274
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWSCLIDGYV 118
NA VF+ + VKN+ +W SM G A G + + + M E + ++++ L+ Y
Sbjct: 275 NAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYR 334
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
G +E + +F+ M+ T V H G
Sbjct: 335 HIGLVEEGIELFKSMK---------TRFGVTPVIEHYGC--------------------- 364
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
+VD+ K G IQEA + +KP D + S+ + +G
Sbjct: 365 ----IVDLLGKAGRIQEAYQFILAMPIKP-DAILLRSLCNACSIYG 405
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 210/379 (55%), Gaps = 35/379 (9%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
+LG ++HGY+ + GY D NSLI MY
Sbjct: 363 DLGASVHGYVLRHGYTLDTPALNSLITMY------------------------------- 391
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV-SGPKPNEVTM 145
AKCG + + +F+ M E+D++SW+ +I GY + D +AL +FEEM+ + + + T+
Sbjct: 392 AKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTV 451
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
VS+L AC+ GAL G+++H VI + + ++ T+LVDMY+KCG ++ A F S +
Sbjct: 452 VSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDS--I 509
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
DV W +I G+ HG +L+++SE G++P+ + +L +LS+C+H G+V++
Sbjct: 510 SWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGL 569
Query: 266 YFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
F + ++ G+ P EH AC+VD++ RA ++ +A++F + +P+ +LG +L+ C
Sbjct: 570 KIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRA 629
Query: 325 HGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
+GK ++ + + +IEL+P G YV L + +A +RWD M +G+KK PG+S
Sbjct: 630 NGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWS 689
Query: 385 FVEMHGALHRFVAHDKSHP 403
+EM+G F + SH
Sbjct: 690 KIEMNGKTTTFFMNHTSHS 708
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 160/344 (46%), Gaps = 37/344 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD TF S + E+G +H I K G++ D + +LI MY
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMY--------- 290
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KCG + +V + +P +DV+ W+ +I G +R G +
Sbjct: 291 ----------------------LKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAE 328
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+AL VF EM SG + + SV+ +CA LG+ D G +H YV+ + L SL+
Sbjct: 329 KALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLI 388
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP- 243
MYAKCG + ++L +F M D+ WN++I G+A + + ++L LF EM V+
Sbjct: 389 TMYAKCGHLDKSLVIFER--MNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQV 446
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
D T ++LL AC+ G + + ++ + P S +VD+ ++ G + A +
Sbjct: 447 DSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCF 506
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPHQ 345
I + S G L+ G HGK D+A + + + +EP+
Sbjct: 507 DSISWKDVVSW-GILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 156/340 (45%), Gaps = 37/340 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + PD TFP L KA A L + GL+IH + G+ SD ++S+SL+++Y+ F
Sbjct: 37 MLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGL 96
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +ARKVF+ + +++V W +M+ Y++ G +
Sbjct: 97 LAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG--------------------------- 129
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EA ++ EMR G KP VT++ +L + L + +H + + + +
Sbjct: 130 ----EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVM 182
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
S++++Y KC + +A +F M+ D+ WN+MI G+A G + E L L M G
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQ--MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDG 240
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
++PD+ T+ LS ++ + K G ++ + + G+ +Y
Sbjct: 241 LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASY 300
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+ L IP + +++G M G+ + A V ++++
Sbjct: 301 RVLETIPNKDVVCWT-VMISGLMRLGRAEKALIVFSEMLQ 339
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 95/180 (52%), Gaps = 2/180 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
NSML+ Y KC + A+ +FD M ++D++SW+ +I GY G+ E L + MR G +
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P++ T + L + L+ GRM+H ++ + + L+T+L+ MY KCG + + V
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
+ + DV W MI G G +++L +FSEM G +++++CA G
Sbjct: 303 LET--IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLG 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
GD+ + L+ F M + P+ T S+L ACA L L G +H V+ N +
Sbjct: 25 GDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYIS 84
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+SLV++YAK G + A VF M+ DV W +MIG ++ G+V E+ L +EM G
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEE--MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQG 142
Query: 241 VKPDEITYLNLLSA--------CAHGGLVKEAWYFFDC 270
+KP +T L +LS C H V Y FDC
Sbjct: 143 IKPGPVTLLEMLSGVLEITQLQCLHDFAV---IYGFDC 177
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 224 bits (572), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 220/420 (52%), Gaps = 33/420 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G PD ++ L A + G+ IH YI K G+ +D V NSL+ MY+ D
Sbjct: 362 MRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSD 421
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +F+ D D +SW+ ++ ++
Sbjct: 422 LYCCFNLFE------------------------------DFRNNADSVSWNTILTACLQH 451
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
E L +F+ M VS +P+ +TM ++L C + +L G +H Y + L ++
Sbjct: 452 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK 511
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
L+DMYAKCG++ +A +F S M DV W+++I G+A G +E+L LF EM G
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDS--MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG 569
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEA 299
++P+ +T++ +L+AC+H GLV+E + + ++G++P EH +C+VD++ARAG++ EA
Sbjct: 570 IEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEA 629
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+F+ ++ ++P + LL+ C G + LA+ +++++P +V L +++A
Sbjct: 630 ERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASS 689
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
W+ A +R +M++ VKK PG S++E+ +H F A D HP + IY +L I SQM
Sbjct: 690 GNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 132/300 (44%), Gaps = 33/300 (11%)
Query: 1 MLRVGVF-PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
ML GVF P+ F KA + LL+ + G IHG K+
Sbjct: 260 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL------------------ 301
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
N ++ S+ D YA+CG ++ AR+VFD + D SW+ +I G
Sbjct: 302 -------------AGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G DEA++VF +MR SG P+ +++ S+LCA AL +G +H Y+I L +
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTV 408
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
SL+ MY C + ++F +D WN+++ H E L LF M +
Sbjct: 409 CNSLLTMYTFCSDLYCCFNLFED-FRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVS 467
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+PD IT NLL C +K K G+ P+ ++D+ A+ G + +A
Sbjct: 468 ECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQA 527
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 119/255 (46%), Gaps = 34/255 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ + PD F + KA A LG +H + K S N+LI MY F
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A +VF GIP+K+L+SW+S++ G+++ G F+
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLG--------FEF------------------- 251
Query: 121 GDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
EAL+ +EM G PNE S L AC+ L D G +H I +EL +
Sbjct: 252 ----EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
SL DMYA+CG + A VF ++ D WN +I G A +G E++ +FS+M
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQ--IERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 240 GVKPDEITYLNLLSA 254
G PD I+ +LL A
Sbjct: 366 GFIPDAISLRSLLCA 380
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 30/301 (9%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPVKN----LVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
SLI SS R + RK+ D I N + N +L Y KCG + AR+VFD MPE+
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
+++S++ +I GY + G EA+ ++ +M P++ S++ ACA + G+ +H
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL 225
VI E L+ + +L+ MY + + +A VF MK D+ W+S+I GF+ G
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK--DLISWSSIIAGFSQLGF 249
Query: 226 VKESLDLFSEMHIVGV-KPDEITYLNLLSACA-----------HGGLVKEAWYFFDCLGK 273
E+L EM GV P+E + + L AC+ HG +K L
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE------LAG 303
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
N + S + D+ AR G + A + QI +P + ++ G N+G D A +
Sbjct: 304 NAIAGCS-----LCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYADEAVS 357
Query: 334 V 334
V
Sbjct: 358 V 358
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 114 IDGYVRKGDYDEALAVFE-EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
I+ + Y EAL F+ + S K T +S++CAC+ +L +GR +H +++++
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
+L ++ MY KCG++++A VF M ++ + S+I G++ +G E++ L
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVF--DFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 233 FSEMHIVGVKPDEITYLNLLSACA 256
+ +M + PD+ + +++ ACA
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACA 179
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 208/387 (53%), Gaps = 3/387 (0%)
Query: 2 LRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
+R D T + A L E G +H + K G D V+++L+ MYS
Sbjct: 310 MRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSP 369
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
A K+F + + + NSM+ Y CG I A++VF+ + + ++SW+ + +G+ + G
Sbjct: 370 MEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNG 429
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
E L F +M +EV++ SV+ ACA + +L+ G + L V+ +
Sbjct: 430 CTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSS 489
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
SL+D+Y KCG ++ VF + M SD WNSMI G+A +G E++DLF +M + G+
Sbjct: 490 SLIDLYCKCGFVEHGRRVFDT--MVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGI 547
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAY 300
+P +IT++ +L+AC + GLV+E F+ + +G P EH++CMVD++ARAG V EA
Sbjct: 548 RPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAI 607
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ ++P SM ++L GC+ +G + + K+IELEP YV LS ++A
Sbjct: 608 NLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSG 667
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVE 387
W+ + +R+ M V K+PG S+ +
Sbjct: 668 DWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 174/400 (43%), Gaps = 76/400 (19%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
D +T + KA A L + G IH I G E D +++SL+++Y+ D+ A +
Sbjct: 185 ADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYM 244
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
+ I + S ++++ GYA CG ++ +R +FD + V+ W+ +I GY+ EAL
Sbjct: 245 LEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEAL 304
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F EMR + + + T+ +V+ AC LG L+ G+ MH + L +V+ ++L+DMY
Sbjct: 305 VLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
Query: 188 AKCGAIQEALHVFRS-----------------------------GLMKPSDVFIWNSMIG 218
+KCG+ EA +F ++ + WNSM
Sbjct: 364 SKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTN 423
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA---------------------- 256
GF+ +G E+L+ F +MH + + DE++ +++SACA
Sbjct: 424 GFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDS 483
Query: 257 -------------HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
G V+ FD + K+ P + M+ A GQ EA
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVP----WNSMISGYATNGQGFEAIDLF 539
Query: 304 CQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
++ I+PT +L C G ++ GRKL E
Sbjct: 540 KKMSVAGIRPTQITFMVVLTACNYCGLVE----EGRKLFE 575
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 177/376 (47%), Gaps = 68/376 (18%)
Query: 25 KRELGLAIHGYITKAGY-ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSML 83
+ L +G + K G+ S V+N L+ MYS + AR +FD +P +N SWN+M+
Sbjct: 41 RETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMI 100
Query: 84 DGY-------------------------------AKCGDISMARQVFDLMPEQDVLSWSC 112
+GY AK G++S+AR++F+ MPE+DV++ +
Sbjct: 101 EGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNS 160
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
L+ GY+ G +EAL +F+E+ S + +T+ +VL ACA L AL G+ +H ++
Sbjct: 161 LLHGYILNGYAEEALRLFKELNFSA---DAITLTTVLKACAELEALKCGKQIHAQILIGG 217
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD----------------------- 209
+ + +SLV++YAKCG ++ A ++ + +P D
Sbjct: 218 VECDSKMNSSLVNVYAKCGDLRMASYMLEQ-IREPDDHSLSALISGYANCGRVNESRGLF 276
Query: 210 -------VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
V +WNSMI G+ + + E+L LF+EM + D T +++AC G ++
Sbjct: 277 DRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLE 335
Query: 263 EAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC 322
K G+ + ++D+ ++ G EA + ++ T +L +++
Sbjct: 336 TGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTI-LLNSMIKVY 394
Query: 323 MNHGKLDLAETVGRKL 338
+ G++D A+ V ++
Sbjct: 395 FSCGRIDDAKRVFERI 410
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 212/411 (51%), Gaps = 34/411 (8%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ T + A LG +HG + K G++ D +VSN+LI
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALI------------- 390
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
D YAKC + A ++F + ++ +SW+ +I GY G+ +
Sbjct: 391 ------------------DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGK 432
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A ++F E + EVT S L ACA L ++D G +H I + + SL+D
Sbjct: 433 AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLID 492
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MYAKCG I+ A VF M+ DV WN++I G++ HGL +++L + M KP+
Sbjct: 493 MYAKCGDIKFAQSVFNE--METIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNG 550
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+T+L +LS C++ GL+ + F+ + ++ G+ P EHY CMV ++ R+GQ+ +A + +
Sbjct: 551 LTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIE 610
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
IP +P+ + A+L+ MN + A +++++ P + YV +SN+YA ++W
Sbjct: 611 GIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWAN 670
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
S+R++M+ MGVKK PG S++E G +H F HP + I ML ++
Sbjct: 671 VASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWL 721
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 136/326 (41%), Gaps = 34/326 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G P++ TF KAS L + +HG I K Y D V L+ +Y+
Sbjct: 238 MRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL-- 295
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
GD+S A +VF+ MP+ DV+ WS +I + +
Sbjct: 296 -----------------------------GDMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EA+ +F MR + PNE T+ S+L CA G +H V+ L + +
Sbjct: 327 GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS 386
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+D+YAKC + A+ +F + + WN++I G+ G ++ +F E
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAE--LSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ 444
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
V E+T+ + L ACA + K K ++D+ A+ G + A
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHG 326
++ AS AL++G HG
Sbjct: 505 SVFNEMETIDVASW-NALISGYSTHG 529
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 136/314 (43%), Gaps = 54/314 (17%)
Query: 10 HLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFD 69
H+ FL K L K E+ +H I K GY+S+ FV +LI+ YS
Sbjct: 147 HVFTSFL-KLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSV------------ 193
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
CG + AR VF+ + +D++ W+ ++ YV G ++++L +
Sbjct: 194 -------------------CGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKL 234
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
MR++G PN T + L A LGA D + +H ++ L + L+ +Y +
Sbjct: 235 LSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQ 294
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
G + +A VF M +DV W+ MI F +G E++DLF M V P+E T
Sbjct: 295 LGDMSDAFKVFNE--MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLS 352
Query: 250 NLLSACAHG----------GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
++L+ CA G GLV + + D N ++DV A+ ++ A
Sbjct: 353 SILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNA----------LIDVYAKCEKMDTA 402
Query: 300 YQFLCQIPIQPTAS 313
+ ++ + S
Sbjct: 403 VKLFAELSSKNEVS 416
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 109/250 (43%), Gaps = 36/250 (14%)
Query: 2 LRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
LR V +TF A A L +LG+ +HG K VSNSLI M
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDM------- 493
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
YAKCGDI A+ VF+ M DV SW+ LI GY G
Sbjct: 494 ------------------------YAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHG 529
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI-DNELPLTLVLR 180
+AL + + M+ KPN +T + VL C++ G +D+G+ +I D+ + L
Sbjct: 530 LGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHY 589
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T +V + + G + +A+ + +PS V IW +M+ A E S I+
Sbjct: 590 TCMVRLLGRSGQLDKAMKLIEGIPYEPS-VMIWRAMLS--ASMNQNNEEFARRSAEEILK 646
Query: 241 VKP-DEITYL 249
+ P DE TY+
Sbjct: 647 INPKDEATYV 656
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 116/286 (40%), Gaps = 48/286 (16%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+L + N +L+ Y K G A +FD MPE++ +S+ L GY + + + ++ +
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRLH 138
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
G + N S L L + +H ++ + +L++ Y+ CG++
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
A VF L K D+ +W ++ + +G ++SL L S M + G P+ T+ L A
Sbjct: 199 SARTVFEGILCK--DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 255 C-----------AHGGLVK------------------------EAWYFFDCLGKNGMTPK 279
HG ++K +A+ F+ + KN + P
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP- 315
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGC 322
++ M+ + G EA ++ + P L ++LNGC
Sbjct: 316 ---WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 214/413 (51%), Gaps = 34/413 (8%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ TF + A A L + G +H + G VSNS++ MYS+
Sbjct: 306 VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYST-------- 357
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
CG++ A +F M +D++SWS +I GY + G +E
Sbjct: 358 -----------------------CGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEE 394
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
F MR SG KP + + S+L ++ ++ GR +H + L +R+SL++
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLIN 454
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY+KCG+I+EA +F G D+ +MI G+A HG KE++DLF + VG +PD
Sbjct: 455 MYSKCGSIKEASMIF--GETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDS 512
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+T++++L+AC H G + +++F+ + + M P EHY CMVD++ RAG++++A + +
Sbjct: 513 VTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
++ + + LL C G ++ +++EL+P V L+N+Y+ ++
Sbjct: 573 EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEE 632
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
A ++R+ M+ GV K PG+S +++ + FV+ D+ HP SE IY +L VS
Sbjct: 633 AANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVS 685
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 146/327 (44%), Gaps = 34/327 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R D TF KA A L + + G AIH ++ G+ + V+NSL MY+
Sbjct: 200 MSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYT---- 255
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+CG++ +F+ M E+DV+SW+ LI Y R
Sbjct: 256 ---------------------------ECGEMQDGLCLFENMSERDVVSWTSLIVAYKRI 288
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +A+ F +MR S PNE T S+ ACA L L G +H V+ L +L +
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS 348
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
S++ MY+ CG + A +F+ M+ D+ W+++IGG+ G +E FS M G
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQG--MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG 406
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
KP + +LLS + +++ G+ S + ++++ ++ G + EA
Sbjct: 407 TKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEAS 466
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGK 327
+ S L A++NG HGK
Sbjct: 467 MIFGETDRDDIVS-LTAMINGYAEHGK 492
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+S+LD Y + G I + +VF MP ++ ++W+ +I G V G Y E L F EM S
Sbjct: 147 SSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL 206
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+ T L ACA L + G+ +H +VI TL + SL MY +CG +Q+ L +
Sbjct: 207 SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCL 266
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
F + M DV W S+I + G ++++ F +M V P+E T+ ++ SACA
Sbjct: 267 FEN--MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV--SG 137
NS L G++ ARQVFD MP D++SW+ +I YV + DEAL +F MRV
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
P+ + VL AC + G +H Y + L ++ + +SL+DMY + G I ++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
VF M + W ++I G G KE L FSEM D T+ L ACA
Sbjct: 164 RVFSE--MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 196/388 (50%), Gaps = 36/388 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV P+ +T L LK G +HG+ + SD + SLI MY
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY--------- 364
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
AKC + + +VF + WS +I G V+
Sbjct: 365 ----------------------AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVS 402
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+AL +F+ MR +PN T+ S+L A A L L + +H Y+ +L T LV
Sbjct: 403 DALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 185 DMYAKCGAIQEALHVFRSGLM---KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+Y+KCG ++ A +F +G+ K DV +W ++I G+ HG +L +F EM GV
Sbjct: 463 HVYSKCGTLESAHKIF-NGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGV 521
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT-PKSEHYACMVDVMARAGQVAEAY 300
P+EIT+ + L+AC+H GLV+E F + ++ T +S HY C+VD++ RAG++ EAY
Sbjct: 522 TPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAY 581
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ IP +PT+++ GALL C+ H + L E KL ELEP G YV L+N+YA
Sbjct: 582 NLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALG 641
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEM 388
RW +R ME +G++K PG+S +E+
Sbjct: 642 RWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 133/253 (52%), Gaps = 33/253 (13%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
V PD T+PF+AKA+ L +LGL +HG I ++ + D++V N+L+ MY +F +
Sbjct: 111 VKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEM 170
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
AR VFD + ++++SWN+M+ GY + G ++ A +FD M + V D
Sbjct: 171 ARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV--------------DL 216
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
D A T+VS+L C HL L+ GR +H V + L + ++ +L
Sbjct: 217 DHA-----------------TIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNAL 259
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
V+MY KCG + EA VF M+ DV W MI G+ G V+ +L+L M GV+P
Sbjct: 260 VNMYLKCGRMDEARFVFDR--MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRP 317
Query: 244 DEITYLNLLSACA 256
+ +T +L+S C
Sbjct: 318 NAVTIASLVSVCG 330
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 142/278 (51%), Gaps = 10/278 (3%)
Query: 52 IHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWS 111
+ M + + +++ D I VKN ++++ Y KCG + AR VFD M +DV++W+
Sbjct: 234 LEMGRNVHKLVEEKRLGDKIEVKN-----ALVNMYLKCGRMDEARFVFDRMERRDVITWT 288
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
C+I+GY GD + AL + M+ G +PN VT+ S++ C ++ G+ +H + +
Sbjct: 289 CMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ 348
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
++ +++ TSL+ MYAKC + VF SG K W+++I G + LV ++L
Sbjct: 349 QVYSDIIIETSLISMYAKCKRVDLCFRVF-SGASK-YHTGPWSAIIAGCVQNELVSDALG 406
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMA 291
LF M V+P+ T +LL A A +++A L K G + +V V +
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYS 466
Query: 292 RAGQVAEAYQFLCQIPIQPTAS---MLGALLNGCMNHG 326
+ G + A++ I + + + GAL++G HG
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHG 504
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 132/288 (45%), Gaps = 53/288 (18%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK--PNEV 143
YA CG I+ AR++F+ MP+ +LS++ +I YVR+G Y +A++VF M G K P+
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
T V A L ++ G ++H ++ + ++ +L+ MY G ++ A VF
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVF--D 176
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH------ 257
+MK DV WN+MI G+ +G + ++L +F M V D T +++L C H
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 258 -----------------------------GGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
G + EA + FD + + + + CM++
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVIT----WTCMIN 292
Query: 289 VMARAGQVAEAYQFLCQI----PIQPTASMLGALLNGC-----MNHGK 327
G V A + LC++ ++P A + +L++ C +N GK
Sbjct: 293 GYTEDGDVENALE-LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 37/232 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V P+ T L A A L + IH Y+TK G+ S + L+H+YS
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGT 470
Query: 61 IPNARKVFDGI----PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
+ +A K+F+GI K++V W +++ GY
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGM---------------------------- 502
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
GD AL VF EM SG PNE+T S L AC+H G +++G + +++++ L
Sbjct: 503 ---HGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLA 559
Query: 177 LVLR-TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
T +VD+ + G + EA ++ + +P+ +W +++ H V+
Sbjct: 560 RSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTST-VWGALLAACVTHENVQ 610
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 221/435 (50%), Gaps = 35/435 (8%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T L KA + G IHG++ ++G+ P++ +
Sbjct: 208 PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC------------------PSSATI 249
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
S++D Y KCG + AR+ FD + E+ ++SWS LI GY ++G++ EA+
Sbjct: 250 T-----------GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F+ ++ + + + S++ A L +G+ M + L + S+VDMY
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
KCG + EA F M+ DV W +I G+ HGL K+S+ +F EM ++PDE+
Sbjct: 359 LKCGLVDEAEKCFAE--MQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 416
Query: 248 YLNLLSACAHGGLVKEAWYFFD-CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
YL +LSAC+H G++KE F L +G+ P+ EHYAC+VD++ RAG++ EA + +
Sbjct: 417 YLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
PI+P + LL+ C HG ++L + VG+ L+ ++ YV +SN+Y W++
Sbjct: 477 PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQG 536
Query: 367 SMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYE 426
+ RE G+KK G S+VE+ +H F + + SHP + I L +++ + Y
Sbjct: 537 NARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYV 596
Query: 427 ---NQEYYFYDNEGK 438
E + D+E K
Sbjct: 597 YGLKHELHDIDDESK 611
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 160/312 (51%), Gaps = 10/312 (3%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NL++ N ++D Y KC + MA +VFD MPE++V+SWS L+ G+V GD +L++F EM
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
G PNE T + L AC L AL+KG +H + + + + + SLVDMY+KCG I
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK--PDEITYLNLL 252
EA VFR + + WN+MI GF G ++LD F M +K PDE T +LL
Sbjct: 160 EAEKVFRR--IVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 253 SACAHGGLVKEAWYFFDCLGKNGM-TPKSEHY-ACMVDVMARAGQVAEAYQFLCQIPIQP 310
AC+ G++ L ++G P S +VD+ + G + A + QI +
Sbjct: 218 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EK 276
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMRE 370
T +L+ G G+ A + ++L EL D LS++ +F + R ++
Sbjct: 277 TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDS--FALSSIIGVFADFALLRQGKQ 334
Query: 371 AMERMGVKKSPG 382
M+ + VK G
Sbjct: 335 -MQALAVKLPSG 345
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 34/328 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G++P+ TF KA L E GL IHG+ K G+E V NSL+ MYS
Sbjct: 98 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 157
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A KVF I ++L+SWN+M+ G+ G S A F +M E ++
Sbjct: 158 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI------------- 204
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL--PLTLV 178
+P+E T+ S+L AC+ G + G+ +H +++ + P +
Sbjct: 205 ----------------KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ SLVD+Y KCG + A F +K + W+S+I G+A G E++ LF +
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQ--IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
+ + D +++ A L+++ K ++ +VD+ + G V E
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDE 366
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHG 326
A + ++ ++ S ++ G HG
Sbjct: 367 AEKCFAEMQLKDVISWT-VVITGYGKHG 393
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
Query: 140 PNE-VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PN+ +VS+L C G D+G +H Y++ + L L+ L+DMY KC A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF S M +V W++++ G +G +K SL LFSEM G+ P+E T+ L AC
Sbjct: 63 VFDS--MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
+++ K G E +VD+ ++ G++ EA + +I
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 226/430 (52%), Gaps = 36/430 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V D T+ L A + + G ++HG + K G E +N+LI MY F
Sbjct: 241 MQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPT 300
Query: 61 --IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ +A +F+ + K+L+SWNS++ G+A
Sbjct: 301 GTMEDALSLFESLKSKDLISWNSIITGFA------------------------------- 329
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+KG ++A+ F +R S K ++ ++L +C+ L L G+ +H +
Sbjct: 330 QKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEF 389
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ +SL+ MY+KCG I+ A F+ K S V WN+MI G+A HGL + SLDLFS+M
Sbjct: 390 VISSLIVMYSKCGIIESARKCFQQISSKHSTV-AWNAMILGYAQHGLGQVSLDLFSQMCN 448
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVA 297
VK D +T+ +L+AC+H GL++E + + + P+ EHYA VD++ RAG V
Sbjct: 449 QNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVN 508
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
+A + + +P+ P +L L C G++++A V L+E+EP YV LS++Y+
Sbjct: 509 KAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYS 568
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
++W++ S+++ M+ GVKK PG+S++E+ + F A D+S+P + IYMM+ +
Sbjct: 569 DLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQ 628
Query: 418 QMKHIVDYEN 427
+M+ + D +N
Sbjct: 629 EMQWL-DSDN 637
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 119/256 (46%), Gaps = 31/256 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G D +F L K A + + +LG +HG + K GYE + +V +SL+ MY+
Sbjct: 37 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 96
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A + F I N VSWN+++ G+ + DI A + LM + ++ +
Sbjct: 97 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT--------MDA 148
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + L + ++ M L H L G + H I N
Sbjct: 149 GTFAPLLTLLDD-----------PMFCNLLKQVHAKVLKLG-LQHEITICN--------- 187
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+++ YA CG++ +A VF GL D+ WNSMI GF+ H L + + +LF +M
Sbjct: 188 -AMISSYADCGSVSDAKRVF-DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 245
Query: 241 VKPDEITYLNLLSACA 256
V+ D TY LLSAC+
Sbjct: 246 VETDIYTYTGLLSACS 261
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Query: 98 VFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGA 157
+FD MP++D +SW+ +I GY G ++A +F M+ SG + + +L A +
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 158 LDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMI 217
D G +H VI + + +SLVDMYAKC +++A F+ + +P+ V WN++I
Sbjct: 62 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKE-ISEPNSVS-WNALI 119
Query: 218 GGFACHGLVKESLDLFSEMHI-VGVKPDEITYLNLLS 253
GF +K + L M + V D T+ LL+
Sbjct: 120 AGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 156
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 233/435 (53%), Gaps = 39/435 (8%)
Query: 4 VGVFPDHLTFPFLAKASACLL--KRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
VG P+ +TF L+ SAC+ +E G IHG + K G + V N+ I
Sbjct: 128 VGFRPNEVTF--LSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFI--------- 176
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
+W Y K GD++ + ++F+ + ++++SW+ +I +++ G
Sbjct: 177 ----------------NW------YGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNG 214
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
++ LA F R G +P++ T ++VL +C +G + + +H ++ + T
Sbjct: 215 LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITT 274
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+L+D+Y+K G ++++ VF + D W +M+ +A HG ++++ F M G+
Sbjct: 275 ALLDLYSKLGRLEDSSTVFHE--ITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGI 332
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAY 300
PD +T+ +LL+AC+H GLV+E ++F+ + K + P+ +HY+CMVD++ R+G + +AY
Sbjct: 333 SPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAY 392
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ ++P++P++ + GALL C + L +L ELEP YV LSN+Y+
Sbjct: 393 GLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASG 452
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
W A +R M++ G+ ++ G S++E +H+FV D SHP SE+I L I +MK
Sbjct: 453 LWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 512
Query: 421 HIVDYENQ-EYYFYD 434
+ Y+++ E+ +D
Sbjct: 513 SEMGYKSKTEFVLHD 527
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 132/263 (50%), Gaps = 5/263 (1%)
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KV + ++ + ++ Y + G A ++FD MPE+D++SW+ LI GY +G +
Sbjct: 56 KVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGK 115
Query: 126 ALAVFEEMRVS--GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
V M +S G +PNEVT +S++ AC + G+ ++GR +H V+ + + + +
Sbjct: 116 CFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAF 175
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
++ Y K G + + +F +K ++ WN+MI +GL ++ L F+ VG +P
Sbjct: 176 INWYGKTGDLTSSCKLFEDLSIK--NLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEP 233
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
D+ T+L +L +C G+V+ A + G + ++D+ ++ G++ ++
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 304 CQIPIQPTASMLGALLNGCMNHG 326
+I P + A+L HG
Sbjct: 294 HEIT-SPDSMAWTAMLAAYATHG 315
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 122/284 (42%), Gaps = 44/284 (15%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
RVG PD TF + ++ + L IHG I G+ ++ ++ +L+ +YS +
Sbjct: 228 RVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLE 287
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
++ VF I + ++W +ML YA G+ R
Sbjct: 288 DSSTVFHEITSPDSMAWTAMLAAYA--------------------------THGFGR--- 318
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPLTL 177
+A+ FE M G P+ VT +L AC+H G +++G+ M Y ID L
Sbjct: 319 --DAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY- 375
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ +VD+ + G +Q+A + + M+PS +W +++G AC L +
Sbjct: 376 ---SCMVDLLGRSGLLQDAYGLIKEMPMEPSS-GVWGALLG--ACRVYKDTQLGTKAAER 429
Query: 238 IVGVKP-DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
+ ++P D Y+ L + + GL K+A + + + G+ S
Sbjct: 430 LFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRAS 473
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 203/387 (52%), Gaps = 34/387 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G PD T + + G IHGY +AG + + ++L++MYS
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYS---- 597
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG + +ARQV+D +PE D +S S LI GY +
Sbjct: 598 ---------------------------KCGSLKLARQVYDRLPELDPVSCSSLISGYSQH 630
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + +F +M +SG + + S+L A A G +H Y+ L +
Sbjct: 631 GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG 690
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+SL+ MY+K G+I + F S + P D+ W ++I +A HG E+L +++ M G
Sbjct: 691 SSLLTMYSKFGSIDDCCKAF-SQINGP-DLIAWTALIASYAQHGKANEALQVYNLMKEKG 748
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
KPD++T++ +LSAC+HGGLV+E+++ + + K+ G+ P++ HY CMVD + R+G++ EA
Sbjct: 749 FKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREA 808
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
F+ + I+P A + G LL C HG+++L + +K IELEP G Y+ LSN+ A
Sbjct: 809 ESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEV 868
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFV 386
WD+ R+ M+ GV+K PG+S V
Sbjct: 869 GEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 162/391 (41%), Gaps = 80/391 (20%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T+ + A A L K G + + K G E D FV +++ +Y+ + A +V
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSC--------------- 112
F IP ++VSW ML GY K D A ++F M V +C
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 113 ------------------------LIDGYVRKGDYDEALAVFEE---------------- 132
LI Y + GD D + VFE+
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITS 427
Query: 133 ----------------MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
M G + +E ++ S+L L L+ G+ +H Y + + L L
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLD 484
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
L + +SL +Y+KCG+++E+ +F+ K D W SMI GF +G ++E++ LFSEM
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFK--DNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
G PDE T +L+ C+ + + G+ + + +V++ ++ G +
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL 602
Query: 297 AEAYQFLCQIP-IQPTASMLGALLNGCMNHG 326
A Q ++P + P + +L++G HG
Sbjct: 603 KLARQVYDRLPELDPVS--CSSLISGYSQHG 631
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 147/334 (44%), Gaps = 37/334 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ G+ D + L CL LG +HGY K+G D V +SL +YS
Sbjct: 444 MLQEGLRTDEFSVCSLLSVLDCL---NLGKQVHGYTLKSGLVLDLTVGSSLFTLYS---- 496
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG + + ++F +P +D W+ +I G+
Sbjct: 497 ---------------------------KCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EA+ +F EM G P+E T+ +VL C+ +L +G+ +H Y + + + L
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++LV+MY+KCG+++ A V+ + D +S+I G++ HGL+++ LF +M + G
Sbjct: 590 SALVNMYSKCGSLKLARQVYDR--LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG 647
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
D ++L A A + K G+ + + ++ + ++ G + +
Sbjct: 648 FTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCC 707
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
+ QI P AL+ HGK + A V
Sbjct: 708 KAFSQIN-GPDLIAWTALIASYAQHGKANEALQV 740
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 133/257 (51%), Gaps = 16/257 (6%)
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD K+L+SW Y+ G ++ A ++FD +P+ DV+S + +I GY + ++E+L
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
F +M G + NE++ SV+ AC+ L A ++ + I V+ ++L+D++
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+K ++A VFR L ++V+ WN++I G + DLF EM + KPD T
Sbjct: 196 SKNLRFEDAYKVFRDSL--SANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH-YAC--MVDVMARAGQVAEAYQFLC 304
Y ++L+ACA E F + + +E + C +VD+ A+ G +AEA +
Sbjct: 254 YSSVLAACAS----LEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 305 QIPIQPTASMLGALLNG 321
+IP P+ +L+G
Sbjct: 310 RIP-NPSVVSWTVMLSG 325
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 34/262 (12%)
Query: 35 YITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISM 94
+ K GY V ++LI ++S +A KVF N+ WN+
Sbjct: 175 HTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNT------------- 221
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
+I G +R +Y +F EM V KP+ T SVL ACA
Sbjct: 222 ------------------IIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
L L G+++ VI V T++VD+YAKCG + EA+ VF S + PS V W
Sbjct: 264 LEKLRFGKVVQARVIKCGAEDVFVC-TAIVDLYAKCGHMAEAMEVF-SRIPNPS-VVSWT 320
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
M+ G+ +L++F EM GV+ + T +++SAC +V EA + K+
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380
Query: 275 GMTPKSEHYACMVDVMARAGQV 296
G S A ++ + +++G +
Sbjct: 381 GFYLDSSVAAALISMYSKSGDI 402
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 209/399 (52%), Gaps = 36/399 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + P + + KA L +G IH I K + D+ V N L+ +Y
Sbjct: 227 MLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGL 286
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV-LSWSCLIDGYVR 119
+ARKVFDG+ +N+V+WNS++ +K + +F M E+ + SW+
Sbjct: 287 FDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWA-------- 338
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
T+ ++L AC+ + AL G+ +H ++ ++ + L
Sbjct: 339 ------------------------TLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPL 374
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
SL+DMY KCG ++ + VF L K D+ WN M+ +A +G ++E ++LF M
Sbjct: 375 LNSLMDMYGKCGEVEYSRRVFDVMLTK--DLASWNIMLNCYAINGNIEEVINLFEWMIES 432
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
GV PD IT++ LLS C+ GL + F+ + ++P EHYAC+VD++ RAG++ E
Sbjct: 433 GVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKE 492
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + + +P +P+AS+ G+LLN C HG + + E ++L LEPH G YV +SN+YA
Sbjct: 493 AVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYAD 552
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVA 397
+ WD +RE M++ GVKK G S+V++ + FVA
Sbjct: 553 AKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVA 591
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 39/278 (14%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLS---WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNE 142
++ C + +AR++FD + + +L+ W+ + GY R G +AL V+ +M S +P
Sbjct: 177 FSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGN 236
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS 202
++ L AC L L GR +H ++ + + V+ L+ +Y + G +A VF
Sbjct: 237 FSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDG 296
Query: 203 GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA------ 256
M +V WNS+I + V E +LF +M + T +L AC+
Sbjct: 297 --MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALL 354
Query: 257 -----HGGLVKEAW--------YFFDCLGKNG------------MTPKSEHYACMVDVMA 291
H ++K D GK G +T + M++ A
Sbjct: 355 TGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYA 414
Query: 292 RAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHG 326
G + E ++++ + + P ALL+GC + G
Sbjct: 415 INGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTG 452
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 207/421 (49%), Gaps = 39/421 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV D F + KA A L + LG IH + K G ES+ V
Sbjct: 280 GVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSV----------------- 322
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
G P ++D Y KC A + F + E + +SWS +I GY + ++
Sbjct: 323 -----GTP---------LVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFE 368
Query: 125 EALAVFEEMRVSGPKP-NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EA+ F+ +R N T S+ AC+ L + G +H I L + ++L
Sbjct: 369 EAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESAL 428
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ MY+KCG + +A VF S M D+ W + I G A +G E+L LF +M G+KP
Sbjct: 429 ITMYSKCGCLDDANEVFES--MDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKP 486
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDC-LGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
+ +T++ +L+AC+H GLV++ + D L K + P +HY CM+D+ AR+G + EA +F
Sbjct: 487 NSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKF 546
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRW 362
+ +P +P A L+GC H L+L E G +L +L+P YV N+Y +W
Sbjct: 547 MKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKW 606
Query: 363 DKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML----GFIVSQ 418
++A M + M +KK S+++ G +HRF+ DK HP +++IY L GF+
Sbjct: 607 EEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGD 666
Query: 419 M 419
M
Sbjct: 667 M 667
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 129/289 (44%), Gaps = 9/289 (3%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDIPNARKVFD----GIPVKNLVSWNSMLDGYAKCGDIS 93
KAG + L R + + R + D GI +++ N +L Y +C +
Sbjct: 76 KAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLE 135
Query: 94 MARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACA 153
A ++FD M E + +S + +I Y +G D+A+ +F M SG KP ++L +
Sbjct: 136 DADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLV 195
Query: 154 HLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF-RSGLMKPSDVFI 212
+ ALD GR +H +VI L + T +V+MY KCG + A VF + + KP
Sbjct: 196 NPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP---VA 252
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
++ G+ G +++L LF ++ GV+ D + +L ACA + C+
Sbjct: 253 CTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVA 312
Query: 273 KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG 321
K G+ + +VD + A + +I +P A+++G
Sbjct: 313 KLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISG 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV---IDNELPLTLVLR 180
+EA +EM +G + + + AC L +L GR++H + I+N +++L+
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENP---SVLLQ 121
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++ MY +C ++++A +F M + +MI +A G++ +++ LFS M G
Sbjct: 122 NCVLQMYCECRSLEDADKLFDE--MSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 241 VKPDEITYLNLLSA 254
KP Y LL +
Sbjct: 180 DKPPSSMYTTLLKS 193
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 227/453 (50%), Gaps = 55/453 (12%)
Query: 5 GVFPDHLTFPFLAKASACLLKREL---GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
GV +++T ++ SACLL +L G +H YI AG+ESD V NSLI MY
Sbjct: 458 GVSSNYITV--VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY------ 509
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
AKCGD+S ++ +F+ + +++++W+ ++ G
Sbjct: 510 -------------------------AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 544
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
+E L + +MR G ++ + L A A L L++G+ +H + +
Sbjct: 545 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFN 604
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+ DMY+KCG I E + + + + PS WN +I HG +E F EM +
Sbjct: 605 AAADMYSKCGEIGEVVKMLPPSVNRSLPS----WNILISALGRHGYFEEVCATFHEMLEM 660
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
G+KP +T+++LL+AC+HGGLV + ++D + ++ G+ P EH C++D++ R+G++AE
Sbjct: 661 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 720
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A F+ ++P++P + +LL C HG LD L +LEP D YV SN++A
Sbjct: 721 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 780
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML------ 412
RW+ ++R+ M +KK S+V++ + F D++HP + +IY L
Sbjct: 781 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 840
Query: 413 ----GFI--VSQMKHIVDYENQEYYFYDNEGKL 439
G++ SQ D E +E+ +++ +L
Sbjct: 841 IKESGYVADTSQALQDTDEEQKEHNLWNHSERL 873
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 123/230 (53%), Gaps = 3/230 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N + N+++ Y K G++S +R+V MP +DV++W+ LI GY D D+ALA F+ MR
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455
Query: 135 VSGPKPNEVTMVSVLCACAHLG-ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
V G N +T+VSVL AC G L++G+ +H Y++ ++ SL+ MYAKCG +
Sbjct: 456 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 515
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
+ +F + ++ WN+M+ A HG +E L L S+M GV D+ ++ LS
Sbjct: 516 SSSQDLFNG--LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
A A +++E K G S + D+ ++ G++ E + L
Sbjct: 574 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 623
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 149/336 (44%), Gaps = 51/336 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKA---SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M +G+ P L A S + + G+ +HG++ K+G SD +VS +++H+Y
Sbjct: 49 MCDLGIKPSSFVIASLVTACGRSGSMFRE--GVQVHGFVAKSGLLSDVYVSTAILHLYGV 106
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
+ + +RKVF+ +P +N+VSW S++ GY+
Sbjct: 107 YGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD----------------------------- 137
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
KG+ +E + +++ MR G NE +M V+ +C L GR + V+ + L L
Sbjct: 138 --KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 195
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ SL+ M G + A ++F M D WNS+ +A +G ++ES +FS M
Sbjct: 196 AVENSLISMLGSMGNVDYANYIFDQ--MSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 253
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS--EHYACMVDVMAR--- 292
+ + T LLS H + + W G +G+ K + C+ + + R
Sbjct: 254 RFHDEVNSTTVSTLLSVLGH--VDHQKW----GRGIHGLVVKMGFDSVVCVCNTLLRMYA 307
Query: 293 -AGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
AG+ EA Q+P + S +L+ +N G+
Sbjct: 308 GAGRSVEANLVFKQMPTKDLISW-NSLMASFVNDGR 342
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 26 RELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDG 85
++ G IHG + K G++S V N+L+ MY
Sbjct: 277 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMY------------------------------ 306
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
A G A VF MP +D++SW+ L+ +V G +AL + M SG N VT
Sbjct: 307 -AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 365
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
S L AC +KGR++H V+ + L ++ +LV MY K G + E+ V M
Sbjct: 366 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ--M 423
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
DV WN++IGG+A ++L F M + GV + IT +++LSAC
Sbjct: 424 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 473
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 133/318 (41%), Gaps = 57/318 (17%)
Query: 16 LAKASACLLKRE-LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK 74
L +S LLK E LG I G + K+G ES V NSLI M S
Sbjct: 165 LVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSM---------------- 208
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
G++ A +FD M E+D +SW+ + Y + G +E+ +F MR
Sbjct: 209 ---------------GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 253
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
+ N T+ ++L H+ GR +H V+ + + +L+ MYA G
Sbjct: 254 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 313
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
EA VF+ M D+ WNS++ F G ++L L M G + +T+ + L+A
Sbjct: 314 EANLVFKQ--MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 371
Query: 255 C-----------AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
C HG +V ++ +G +V + + G+++E+ + L
Sbjct: 372 CFTPDFFEKGRILHGLVVVSGLFYNQIIGN-----------ALVSMYGKIGEMSESRRVL 420
Query: 304 CQIPIQPTASMLGALLNG 321
Q+P + + AL+ G
Sbjct: 421 LQMPRRDVVAW-NALIGG 437
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV D +F A+A L E G +HG K G+E D F+ N+ MYS
Sbjct: 556 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYS---- 611
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG+I ++ + + SW+ LI R
Sbjct: 612 ---------------------------KCGEIGEVVKMLPPSVNRSLPSWNILISALGRH 644
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++E A F EM G KP VT VS+L AC+H G +DKG + ++ +I + L +
Sbjct: 645 GYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG-LAYYDMIARDFGLEPAIE 703
Query: 181 --TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
++D+ + G + EA MKP+D+ +W S++ HG
Sbjct: 704 HCICVIDLLGRSGRLAEAETFISKMPMKPNDL-VWRSLLASCKIHG 748
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 116/232 (50%), Gaps = 9/232 (3%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y K G + AR +FD+MP ++ +SW+ ++ G VR G Y E + F +M G KP+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 146 VSVLCACAHLGAL-DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
S++ AC G++ +G +H +V + L + + T+++ +Y G + + VF
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE-- 119
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
M +V W S++ G++ G +E +D++ M GV +E + ++S+C GL+K+
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDE 176
Query: 265 WYFFDCLG---KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
+G K+G+ K ++ ++ G V A Q+ + T S
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 228
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 208/381 (54%), Gaps = 12/381 (3%)
Query: 66 KVFDGIPVKNLV-----SWNSMLDGYAKCGDISMARQVFDLMPEQ-DVLSWSCLIDGYVR 119
K G+ +KN + + N+++ Y KCG++ ++F M E+ D ++W+ +I GY+
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+AL + M +G + + +VL A A + L++G +H + L +V+
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++LVDMY+KCG + AL F + M + + WNSMI G+A HG +E+L LF M +
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNT--MPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 240 G-VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVA 297
G PD +T++ +LSAC+H GL++E + F+ + + G+ P+ EH++CM DV+ RAG++
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD 774
Query: 298 EAYQFLCQIPIQPTASMLGALLNGC--MNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
+ F+ ++P++P + +L C N K +L + L +LEP YV L N+
Sbjct: 775 KLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNM 834
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
YA RW+ R+ M+ VKK GYS+V M +H FVA DKSHP ++ IY L +
Sbjct: 835 YAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKEL 894
Query: 416 VSQMKHIVDYENQEYYFYDNE 436
+M+ + YD E
Sbjct: 895 NRKMRDAGYVPQTGFALYDLE 915
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 130/251 (51%), Gaps = 7/251 (2%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
K++ N++++ Y + GD AR+VFD MP ++ +SW+C++ GY R G++ EAL +M
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDK--GRMMHHYVIDNELPLTLVLRTSLVDMYAKC- 190
G N+ VSVL AC +G++ GR +H + + V+ L+ MY KC
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G++ AL F G ++ + WNS+I ++ G + + +FS M G +P E T+ +
Sbjct: 154 GSVGYALCAF--GDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211
Query: 251 LL-SACAHGGL-VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI 308
L+ +AC+ V+ + K+G+ + +V A++G ++ A + Q+
Sbjct: 212 LVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET 271
Query: 309 QPTASMLGALL 319
+ ++ G ++
Sbjct: 272 RNAVTLNGLMV 282
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 153/356 (42%), Gaps = 38/356 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R + P T + A L +LG IHG K G + + VSN+L+ +Y+
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ RK+F +P + VSWNS++ A+ +
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALAR------------------------------SE 495
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EA+ F + +G K N +T SVL A + L + G+ +H + N +
Sbjct: 496 RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE 555
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+ Y KCG + +F S + + D WNSMI G+ + L+ ++LDL M G
Sbjct: 556 NALIACYGKCGEMDGCEKIF-SRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG 614
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ D Y +LSA A ++ C + + + +VD+ ++ G++ A
Sbjct: 615 QRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYAL 674
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGK----LDLAETVGRKLIELEPHQDGRYVGL 352
+F +P++ + S ++++G HG+ L L ET+ KL P +VG+
Sbjct: 675 RFFNTMPVRNSYS-WNSMISGYARHGQGEEALKLFETM--KLDGQTPPDHVTFVGV 727
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 3/170 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N +++ YAKCG I+ AR+VF M ++D +SW+ +I G + G + EA+ ++ MR
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P T++S L +CA L G+ +H + + L + + +L+ +YA+ G + E +
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 200 FRSGLMKPSDVFIWNSMIGGFA-CHGLVKESLDLFSEMHIVGVKPDEITY 248
F S M D WNS+IG A + E++ F G K + IT+
Sbjct: 473 FSS--MPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ G D + + A A + E G+ +H +A ESD V ++L+ MYS
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A + F+ +PV+N SWNSM+ GYA R
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYA-------------------------------RH 698
Query: 121 GDYDEALAVFEEMRVSGPK-PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G +EAL +FE M++ G P+ VT V VL AC+H G L++G H + + L +
Sbjct: 699 GQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG-FKHFESMSDSYGLAPRI 757
Query: 180 R--TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+ + D+ + G + + MKP +V IW +++G
Sbjct: 758 EHFSCMADVLGRAGELDKLEDFIEKMPMKP-NVLIWRTVLGA 798
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 32/255 (12%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGL--AIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
G P TF L + L + ++ L I I K+G +D FV + L+ ++ +
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
ARKVF+ + +N V+ N ++ G + RQ + + + + +ID V
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVG--------LVRQKWGEEATKLFMDMNSMID--VSPES 310
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV-LRT 181
Y L+ F E ++ EV L KGR +H +VI L +V +
Sbjct: 311 YVILLSSFPEYSLA----EEV-------------GLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
LV+MYAKCG+I +A VF M D WNSMI G +G E+++ + M +
Sbjct: 354 GLVNMYAKCGSIADARRVFY--FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 242 KPDEITYLNLLSACA 256
P T ++ LS+CA
Sbjct: 412 LPGSFTLISSLSSCA 426
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 115/274 (41%), Gaps = 51/274 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGL----AIHGYITKAGYESDRFVSNSLIHMYS 56
M++ G+F + + F++ AC +G+ IHG + K Y D VSN LI MY
Sbjct: 93 MVKEGIFSNQ--YAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY- 149
Query: 57 SFRDIPNARKVFDGIPVKNLVSWNSMLD-GYAKC--GDISMARQVFDLMPEQDVLSWSCL 113
W + GYA C GDI + V SW+ +
Sbjct: 150 ----------------------WKCIGSVGYALCAFGDIEVKNSV----------SWNSI 177
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH---YVID 170
I Y + GD A +F M+ G +P E T S++ L D R++ +
Sbjct: 178 ISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV-RLLEQIMCTIQK 236
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESL 230
+ L L + + LV +AK G++ A VF M+ + N ++ G +E+
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQ--METRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 231 DLFSEMH-IVGVKPDEITYLNLLSACAHGGLVKE 263
LF +M+ ++ V P+ +Y+ LLS+ L +E
Sbjct: 295 KLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEE 326
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 236/511 (46%), Gaps = 109/511 (21%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R G + TFP + A A + +G+ +H I K+G++++ +V ++LI MY+ R++
Sbjct: 220 REGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREME 279
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV--------------- 107
+AR + +G+ V ++VSWNSM+ G + G I A +F M E+D+
Sbjct: 280 SARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFA 339
Query: 108 -------------------------LSWSCLIDGYVRKGDYDEALAVFE----------- 131
L + L+D Y ++G D AL VFE
Sbjct: 340 LSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWT 399
Query: 132 --------------------EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
MRV G P+++ SVL A A L L+ G+ +H I +
Sbjct: 400 ALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKS 459
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
P +L + SLV MY KCG++++A +F S M+ D+ W +I G+A +GL++++
Sbjct: 460 GFPSSLSVNNSLVTMYTKCGSLEDANVIFNS--MEIRDLITWTCLIVGYAKNGLLEDAQR 517
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMA 291
F M V G+TP EHYACM+D+
Sbjct: 518 YFDSMRTV----------------------------------YGITPGPEHYACMIDLFG 543
Query: 292 RAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVG 351
R+G + Q L Q+ ++P A++ A+L HG ++ E + L+ELEP+ YV
Sbjct: 544 RSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQ 603
Query: 352 LSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMM 411
LSN+Y+ R D+A ++R M+ + K PG S+VE G +H F++ D+ HP +IY
Sbjct: 604 LSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSK 663
Query: 412 LGFIVSQMKHIVDYENQEYYFY--DNEGKLL 440
+ ++ +K + + + + D EGK L
Sbjct: 664 VDEMMLLIKEAGYFADMSFALHDLDKEGKEL 694
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 153/301 (50%), Gaps = 7/301 (2%)
Query: 26 RELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDG 85
+ G IH Y + + SN L+ S + AR++FD +P ++ +WN+M+
Sbjct: 14 KPFGSCIHSYADRT-----KLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVA 68
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y+ +S A ++F P ++ +SW+ LI GY + G EA +F EM+ G KPNE T+
Sbjct: 69 YSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTL 128
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
SVL C L L +G +H + I L + + L+ MYA+C I EA ++F +
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+ ++V W SM+ G++ +G ++++ F ++ G + ++ T+ ++L+ACA +
Sbjct: 189 EKNNV-TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGV 247
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
C+ K+G + ++D+ A+ ++ A L + + S +++ GC+
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVS-WNSMIVGCVRQ 306
Query: 326 G 326
G
Sbjct: 307 G 307
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 148/329 (44%), Gaps = 36/329 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P+ T + + L+ G IHG+ K G++ D V N L+ MY+ + I A
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEA 179
Query: 65 RKVFDGIP-VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
+F+ + KN V+W SML GY++ +G+ K
Sbjct: 180 EYLFETMEGEKNNVTWTSMLTGYSQ--------------------------NGFAFK--- 210
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
A+ F ++R G + N+ T SVL ACA + A G +H ++ + + ++++L
Sbjct: 211 --AIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSAL 268
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+DMYAKC ++ A + M+ DV WNSMI G GL+ E+L +F MH +K
Sbjct: 269 IDMYAKCREMESARALLEG--MEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKI 326
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
D+ T ++L+ A + CL K G +VD+ A+ G + A +
Sbjct: 327 DDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKV 386
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+ I+ AL+ G ++G D A
Sbjct: 387 F-EGMIEKDVISWTALVTGNTHNGSYDEA 414
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 198/386 (51%), Gaps = 43/386 (11%)
Query: 6 VFPDHLTFPFLAKASACLLK-RELGLAIHGYITK--AGYESDRFVSNSLIHMYSSFRDIP 62
V P+ T+P L KAS + G A+H ++ K DRFV +L+ Y
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFY------- 160
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
A CG + AR +F+ + E D+ +W+ L+ Y +
Sbjct: 161 ------------------------ANCGKLREARSLFERIREPDLATWNTLLAAYANSEE 196
Query: 123 YD---EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
D E L +F M+V +PNE+++V+++ +CA+LG +G H YV+ N L L +
Sbjct: 197 IDSDEEVLLLFMRMQV---RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFV 253
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
TSL+D+Y+KCG + A VF M DV +N+MI G A HG +E ++L+ +
Sbjct: 254 GTSLIDLYSKCGCLSFARKVFDE--MSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQ 311
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAE 298
G+ PD T++ +SAC+H GLV E F+ + G+ PK EHY C+VD++ R+G++ E
Sbjct: 312 GLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEE 371
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + + ++P++P A++ + L HG + E + L+ LE G YV LSN+YA
Sbjct: 372 AEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAG 431
Query: 359 FRRWDKARSMREAMERMGVKKSPGYS 384
RW RE M+ V KSPG S
Sbjct: 432 VNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 41/229 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+R+ V P+ L+ L K+ A L + G+ H Y+ K ++FV SLI +YS
Sbjct: 207 FMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGC 266
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ARKVFD + +++ +N+M+ G A + G+ ++
Sbjct: 267 LSFARKVFDEMSQRDVSCYNAMIRGLA--------------------------VHGFGQE 300
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH-----YVIDNELPL 175
G + +++ + G P+ T V + AC+H G +D+G + + Y I+ ++
Sbjct: 301 G-----IELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEH 355
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
LVD+ + G ++EA + +KP + +W S +G HG
Sbjct: 356 Y----GCLVDLLGRSGRLEEAEECIKKMPVKP-NATLWRSFLGSSQTHG 399
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 214/419 (51%), Gaps = 35/419 (8%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
+G PD T + SA L +G IHGY K G E D V++SL HMY + +
Sbjct: 85 LGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQD 144
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
V +PV+NLV+ W+ LI G + G
Sbjct: 145 GEIVIRSMPVRNLVA-------------------------------WNTLIMGNAQNGCP 173
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+ L +++ M++SG +PN++T V+VL +C+ L +G+ +H I + + +SL
Sbjct: 174 ETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSL 233
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVK 242
+ MY+KCG + +A F + D +W+SMI + HG E+++LF+ M ++
Sbjct: 234 ISMYSKCGCLGDAAKAFSE--REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNME 291
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
+E+ +LNLL AC+H GL + FD + K G P +HY C+VD++ RAG + +A
Sbjct: 292 INEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEA 351
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
+ +PI+ + LL+ C H ++A+ V +++++++P+ YV L+NV+A +R
Sbjct: 352 IIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKR 411
Query: 362 WDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
W +R++M VKK G S+ E G +H+F D+S S++IY L + +MK
Sbjct: 412 WRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMK 470
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 121/205 (59%), Gaps = 2/205 (0%)
Query: 52 IHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWS 111
+ MYS D P+A V+ + KN +S N +++GY + GD+ AR+VFD MP++ + +W+
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
+I G ++ +E L++F EM G P+E T+ SV A L ++ G+ +H Y I
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
L L LV+ +SL MY + G +Q+ V RS M ++ WN++I G A +G + L
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRS--MPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 232 LFSEMHIVGVKPDEITYLNLLSACA 256
L+ M I G +P++IT++ +LS+C+
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCS 203
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 219/417 (52%), Gaps = 35/417 (8%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD +T + A A L + G+ +H KA S V+N+LI+MYS
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS--------- 444
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KC I A +F +P ++V+SW+ +I G E
Sbjct: 445 ----------------------KCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFE 482
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
AL +M+++ +PN +T+ + L ACA +GAL G+ +H +V+ + L L +L+D
Sbjct: 483 ALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLD 541
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY +CG + A F S + DV WN ++ G++ G ++LF M V+PDE
Sbjct: 542 MYVRCGRMNTAWSQFNS---QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDE 598
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
IT+++LL C+ +V++ +F + G+TP +HYAC+VD++ RAG++ EA++F+ +
Sbjct: 599 ITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQK 658
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKA 365
+P+ P ++ GALLN C H K+DL E + + EL+ G Y+ L N+YA +W +
Sbjct: 659 MPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREV 718
Query: 366 RSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
+R M+ G+ G S+VE+ G +H F++ DK HP +++I +L +M +
Sbjct: 719 AKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEV 775
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 122/255 (47%), Gaps = 33/255 (12%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV PD TFP + + + G +H ++ + GYE D V N+LI MY
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY--------- 241
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KCGD+ AR +FD MP +D++SW+ +I GY G
Sbjct: 242 ----------------------VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
E L +F MR P+ +T+ SV+ AC LG GR +H YVI + + + SL
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MY G+ +EA +F M+ D+ W +MI G+ + L +++D + M VKPD
Sbjct: 340 QMYLNAGSWREAEKLFSR--MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 245 EITYLNLLSACAHGG 259
EIT +LSACA G
Sbjct: 398 EITVAAVLSACATLG 412
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 113/244 (46%), Gaps = 34/244 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + V PD +T + A L R LG IH Y+ G+ D V NSL MY +
Sbjct: 288 MRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGS 347
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A K+F + K++VSW +M+ GY ++ +P
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYE-----------YNFLP----------------- 379
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
D+A+ + M KP+E+T+ +VL ACA LG LD G +H I L +++
Sbjct: 380 ---DKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L++MY+KC I +AL +F + + +V W S+I G + E+L +M +
Sbjct: 437 NNLINMYSKCKCIDKALDIFHN--IPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT- 493
Query: 241 VKPD 244
++P+
Sbjct: 494 LQPN 497
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 100/177 (56%), Gaps = 3/177 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR-VSGP 138
N+ L + + G++ A VF M E+++ SW+ L+ GY ++G +DEA+ ++ M V G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
KP+ T VL C + L +G+ +H +V+ L + + +L+ MY KCG ++ A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
+F M D+ WN+MI G+ +G+ E L+LF M + V PD +T +++SAC
Sbjct: 253 LFDR--MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 216/428 (50%), Gaps = 51/428 (11%)
Query: 7 FPDHLTFPFLAKASACLLKREL-GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
F D + F K S+ L G IH + K G+ + + SL+ YSS
Sbjct: 61 FVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSS-------- 112
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE-QDVLSWSCLIDGYVRKGDYD 124
GD+ ARQVFD PE Q+++ W+ +I Y +
Sbjct: 113 -----------------------VGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSV 149
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE--LPLTLVLRTS 182
EA+ +F+ M + + V + L ACA LGA+ G ++ I + L + L LR S
Sbjct: 150 EAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNS 209
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG-- 240
L++MY K G ++A +F + K DV + SMI G+A +G +ESL+LF +M +
Sbjct: 210 LLNMYVKSGETEKARKLFDESMRK--DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQS 267
Query: 241 ----VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQ 295
+ P+++T++ +L AC+H GLV+E F + + + P+ H+ CMVD+ R+G
Sbjct: 268 QDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGH 327
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
+ +A++F+ Q+PI+P + LL C HG ++L E V R++ EL+ G YV LSN+
Sbjct: 328 LKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNI 387
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
YA WD+ MR +R+ ++ PG S++E+ ++ FV S P + +M+G I
Sbjct: 388 YASKGMWDEKSKMR---DRVRKRRMPGKSWIELGSIINEFV----SGPDNNDEQLMMGEI 440
Query: 416 VSQMKHIV 423
++ +V
Sbjct: 441 SEVLRCLV 448
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 208/388 (53%), Gaps = 6/388 (1%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF 99
G S+ FV +++++ Y + +AR+ FD N+VS +++ GY K + A +F
Sbjct: 2 GLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLF 61
Query: 100 DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK-PNEVTMVSVLCACAHLGAL 158
MPE+ V++W+ +I G+ + G +EA+ F +M G PNE T + A +++ +
Sbjct: 62 RAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASH 121
Query: 159 DKGRMMHHYVIDN-ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMI 217
G+ +H I + + SL+ Y+KCG ++++L F + ++ WNSMI
Sbjct: 122 GAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMI 181
Query: 218 GGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
G+A +G +E++ +F +M ++P+ +T L +L AC H GL++E + +F+ +
Sbjct: 182 WGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD 241
Query: 277 TP---KSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
P + EHYACMVD+++R+G+ EA + + +P+ P ALL GC H LA+
Sbjct: 242 DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKL 301
Query: 334 VGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALH 393
K++EL+P YV LSN Y+ W +R M+ G+K+ G S++E+ +
Sbjct: 302 AASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIR 361
Query: 394 RFVAHDKSHPSSEQIYMMLGFIVSQMKH 421
FV DK++ +++Y ML + ++
Sbjct: 362 VFVNADKNNELKDEVYRMLALVSQHLEE 389
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/344 (36%), Positives = 184/344 (53%), Gaps = 9/344 (2%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D TFPF+ KA LG +HG KAG+ +D F N+L+ +Y + RKVF
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
D +P +++VSW +ML G + A VF+ MP ++V+SW+ +I YV+ DEA
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 237
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F M+V KPNE T+V++L A LG+L GR +H Y N L L T+L+DMY+
Sbjct: 238 LFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYS 297
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF-SEMHIVGVKPDEIT 247
KCG++Q+A VF +M+ + WNSMI HG +E+L LF V+PD IT
Sbjct: 298 KCGSLQDARKVF--DVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAIT 355
Query: 248 YLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
++ +LSACA+ G VK+ YF + G++P EH ACM+ ++ +A +V +A + +
Sbjct: 356 FVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
Query: 307 PIQPT-ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRY 349
P S G MN + ET + I GR+
Sbjct: 416 DSDPDFNSSFGNEYTDGMN----ETNETPSQHQIMFTKWDTGRF 455
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 77/172 (44%), Gaps = 41/172 (23%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ T L +AS L +G +H Y K G+ D F+ +LI MYS + +AR
Sbjct: 247 VKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDAR 306
Query: 66 KVFDGIPVKNLVSWNSMLD--GYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
KVFD + K+L +WNSM+ G CG
Sbjct: 307 KVFDVMQGKSLATWNSMITSLGVHGCG--------------------------------- 333
Query: 124 DEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKG-----RMMHHYVI 169
+EAL++FEEM +P+ +T V VL ACA+ G + G RM+ Y I
Sbjct: 334 EEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGI 385
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 113/298 (37%), Gaps = 61/298 (20%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
IH I K +D+ + LI + SSF + A VF+ + + +WN M+ +
Sbjct: 39 IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLS---- 94
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS-GPKPNEVTMVSVLC 150
++ R EAL +F M +S + ++ T V+
Sbjct: 95 ----------------------VNHKPR-----EALLLFILMMISHQSQFDKFTFPFVIK 127
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF-----RS--- 202
AC ++ G +H I + + +L+D+Y KCG VF RS
Sbjct: 128 ACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVS 187
Query: 203 ------GLMKPS---------------DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
GL+ S +V W +MI + + E+ LF M + V
Sbjct: 188 WTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDV 247
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
KP+E T +NLL A G + + D KNG ++D+ ++ G + +A
Sbjct: 248 KPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDA 305
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 213/410 (51%), Gaps = 26/410 (6%)
Query: 43 SDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKN----------LVSWNSMLDGYAKCGDI 92
++ FV N+L ++ SS R N R + + V + + + ++++ Y KCG +
Sbjct: 230 NEDFVWNNLTYL-SSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKV 288
Query: 93 SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCAC 152
A++VFD Q++ + ++D Y + ++EAL +F +M PNE T +L +
Sbjct: 289 LYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSI 348
Query: 153 AHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFI 212
A L L +G ++H V+ + +++ +LV+MYAK G+I++A F SG M D+
Sbjct: 349 AELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF-SG-MTFRDIVT 406
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
WN+MI G + HGL +E+L+ F M G P+ IT++ +L AC+H G V++ ++F+ L
Sbjct: 407 WNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLM 466
Query: 273 KN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
K + P +HY C+V ++++AG +A F+ PI+ LLN C L
Sbjct: 467 KKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLG 526
Query: 332 ETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGA 391
+ V IE P+ G YV LSN++A R W+ +R M GVKK PG S++ +
Sbjct: 527 KKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQ 586
Query: 392 LHRFVAHDKSHPSSEQIYMMLGFIVSQMK------------HIVDYENQE 429
H F+A D HP IY + ++S++K H VD E +E
Sbjct: 587 THVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQRE 636
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 3/221 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-P 138
NS+++ Y KC + AR++FDLMPE++V+SW ++ GY G E L +F+ M SG
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
+PNE V +C++ G +++G+ H + L +R +LV MY+ C EA+
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
V + D+ +++S + G+ G KE LD+ + + +TYL+ L ++
Sbjct: 193 VLDD--LPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL 250
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ A + + G + E ++++ + G+V A
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYA 291
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 45/224 (20%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ TF L + A L + G +HG + K+GY + V N+L++MY+ I +AR
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
K F G+ +++V+WN+M+ G C + R E
Sbjct: 394 KAFSGMTFRDIVTWNTMISG---CSHHGLGR----------------------------E 422
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR----- 180
AL F+ M +G PN +T + VL AC+H+G +++G +H++ N+L ++
Sbjct: 423 ALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQG--LHYF---NQLMKKFDVQPDIQH 477
Query: 181 -TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
T +V + +K G ++A R+ ++ DV W +++ AC+
Sbjct: 478 YTCIVGLLSKAGMFKDAEDFMRTAPIE-WDVVAWRTLLN--ACY 518
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 224/405 (55%), Gaps = 14/405 (3%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNS-----ML 83
LA++ + G++ D F S+++ +S + R+ F G +K NS ++
Sbjct: 224 ALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ-FHGKLIKAGFHQNSHVGSGLI 282
Query: 84 DGYAKCGDISM---ARQVFDLMPEQDVLSWSCLIDGYVRKGDY-DEALAVFEEMRVSGPK 139
D Y+KCG + +VF + D++ W+ +I GY + +EA+ F +M+ G +
Sbjct: 283 DFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHR 342
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV-LRTSLVDMYAKCGAIQEALH 198
P++ + V V AC++L + + + +H I + +P + + +L+ +Y K G +Q+A
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARW 402
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF M + +N MI G+A HG E+L L+ M G+ P++IT++ +LSACAH
Sbjct: 403 VFDR--MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHC 460
Query: 259 GLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
G V E +F+ + + + P++EHY+CM+D++ RAG++ EA +F+ +P +P + A
Sbjct: 461 GKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAA 520
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGV 377
LL C H + LAE +L+ ++P YV L+N+YA R+W++ S+R++M +
Sbjct: 521 LLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRI 580
Query: 378 KKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
+K PG S++E+ H FVA D SHP ++ L ++ +MK +
Sbjct: 581 RKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKV 625
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 14/249 (5%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G ++H K+ S ++SN +++YS + AR F N+ S+N ++ YAK
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
I +ARQ+FD +P+ D +S++ LI GY + A+ +F+ MR G + + T+ +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ AC +D + +H + + + + V Y+K G ++EA+ VF G+ +
Sbjct: 147 IAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY-GMDELR 203
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA-----------H 257
D WNSMI + H ++L L+ EM G K D T ++L+A H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 258 GGLVKEAWY 266
G L+K ++
Sbjct: 264 GKLIKAGFH 272
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRF-VSNSLIHMYSSFR 59
M R+G PD +F + A + L IHG K+ S+R V+N+LI +Y
Sbjct: 336 MQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSG 395
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
++ +AR VFD +P N VS+N M+ GYA+
Sbjct: 396 NLQDARWVFDRMPELNAVSFNCMIKGYAQ------------------------------- 424
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELP 174
G EAL +++ M SG PN++T V+VL ACAH G +D+G+ M + I+ E
Sbjct: 425 HGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAE 484
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+ ++D+ + G ++EA + KP V W +++G H
Sbjct: 485 HY----SCMIDLLGRAGKLEEAERFIDAMPYKPGSV-AWAALLGACRKH 528
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 207/413 (50%), Gaps = 34/413 (8%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD + A A L GL +HG + K G + FV +SLI +YS
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYS----------- 522
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
KCG MA +VF M +++++W+ +I Y R + ++
Sbjct: 523 --------------------KCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSI 562
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F M G P+ V++ SVL A + +L KG+ +H Y + +P L+ +L+DMY
Sbjct: 563 DLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMY 622
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
KCG + A ++F+ M+ + WN MI G+ HG +L LF EM G PD++T
Sbjct: 623 VKCGFSKYAENIFKK--MQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVT 680
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
+L+L+SAC H G V+E F+ + ++ G+ P EHYA MVD++ RAG + EAY F+ +
Sbjct: 681 FLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
PI+ +S+ LL+ H ++L KL+ +EP + YV L N+Y ++A
Sbjct: 741 PIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAA 800
Query: 367 SMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+ M+ G+ K PG S++E+ + F + S P +I+ +L + S M
Sbjct: 801 KLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 102/177 (57%), Gaps = 4/177 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP- 138
+++L Y+KCG A VF M E+D+++W LI G + G + EAL VF +M+
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 139 -KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
KP+ M SV ACA L AL G +H +I L L + + +SL+D+Y+KCG + AL
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
VF S M ++ WNSMI ++ + L + S+DLF+ M G+ PD ++ ++L A
Sbjct: 532 KVFTS--MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 43/257 (16%)
Query: 11 LTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFD- 69
TFP L KA + L G IHG + G+ D F++ SL++MY + A +VFD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 70 ------GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
G+ +++ WNSM+DGY K R+ +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFK-----------------------------FRR--F 149
Query: 124 DEALAVFEEMRVSGPKPNEVTM---VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
E + F M V G +P+ ++ VSV+C + ++G+ +H +++ N L L+
Sbjct: 150 KEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNF-RREEGKQIHGFMLRNSLDTDSFLK 208
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+DMY K G +A VF + S+V +WN MI GF G+ + SLDL+
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVE-IEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNS 267
Query: 241 VKPDEITYLNLLSACAH 257
VK ++ L AC+
Sbjct: 268 VKLVSTSFTGALGACSQ 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 42/281 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKA---SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
ML G+FPD ++ + A +A LLK G ++HGY + G SD + N+LI MY
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLK---GKSLHGYTLRLGIPSDTHLKNALIDMYVK 624
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
A +F + K+L++WN M+ GY GD C+
Sbjct: 625 CGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGD--------------------CIT--- 661
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI-DNELPLT 176
AL++F+EM+ +G P++VT +S++ AC H G +++G+ + ++ D +
Sbjct: 662 --------ALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPN 713
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ ++VD+ + G ++EA + F + +D IW ++ H V+ L + S
Sbjct: 714 MEHYANMVDLLGRAGLLEEA-YSFIKAMPIEADSSIWLCLLSASRTHHNVE--LGILSAE 770
Query: 237 HIVGVKPDE-ITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
++ ++P+ TY+ L++ GL EA + + G+
Sbjct: 771 KLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
S+L Y+KCG + A VF + ++ + W+ ++ Y AL +F MR
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ T+ +V+ C+ LG + G+ +H + + T + ++L+ +Y+KCG +A V
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH--IVGVKPDEITYLNLLSACA- 256
F+S M+ D+ W S+I G +G KE+L +F +M +KPD ++ +ACA
Sbjct: 431 FKS--MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG 488
Query: 257 ----------HGGLVK 262
HG ++K
Sbjct: 489 LEALRFGLQVHGSMIK 504
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 206/424 (48%), Gaps = 37/424 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR + F + A A +G+ +HG I K G+ + +VS SLI Y
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFY----- 270
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A C I +R+VFD + V W+ L+ GY
Sbjct: 271 --------------------------ANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+++AL++F M + PN+ T S L +C+ LG LD G+ MH + L +
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SLV MY+ G + +A+ VF K + WNS+I G A HG K + +F +M +
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKS--IVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 241 VKPDEITYLNLLSACAHGGLVKEA--WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
+PDEIT+ LLSAC+H G +++ +++ G N + K +HY CMVD++ R G++ E
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKE 482
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + + ++ ++P + ALL+ C H +D E + L+ YV LSN+YA
Sbjct: 483 AEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYAS 542
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
RW +R M++ G+ K PG S+V + G H F + D+ H S +IY L F+ +
Sbjct: 543 AGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCS--RIYEKLEFLREK 600
Query: 419 MKHI 422
+K +
Sbjct: 601 LKEL 604
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 154/358 (43%), Gaps = 65/358 (18%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSW 110
+I Y+ + +A +FD +PV+++VSWNSM+ G +CGD++ A ++FD MPE+ V+SW
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSW 131
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSG---------------------------PKPNEV 143
+ +++G R G D+A +F +M V P N +
Sbjct: 132 TAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVI 191
Query: 144 TMVSVLC-----------------------------------ACAHLGALDKGRMMHHYV 168
+ +++C ACA+ A G +H +
Sbjct: 192 SWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLI 251
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
I + SL+ YA C I ++ VF + + V +W +++ G++ + ++
Sbjct: 252 IKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE--QVAVWTALLSGYSLNKKHED 309
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+L +FS M + P++ T+ + L++C+ G + K G+ + +V
Sbjct: 310 ALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVV 369
Query: 289 VMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
+ + +G V +A +I + S +++ GC HG+ A + ++I L D
Sbjct: 370 MYSDSGNVNDAVSVFIKIFKKSIVSW-NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD 426
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
R I AR+VF+ +P ++ + M+ GY + + A +FD MP +DV+SW+ +I G V
Sbjct: 49 RRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCV 108
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT-L 177
GD + A+ +F+EM P+ + V+ +++ C G +D+ + + ++P+
Sbjct: 109 ECGDMNTAVKLFDEM----PERSVVSWTAMVNGCFRSGKVDQAERLFY-----QMPVKDT 159
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
S+V Y + G + +AL +F+ M +V W +MI G + E+LDLF M
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQ--MPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 238 IVGVKPDEITYLNLLSACAHG 258
+K + +++ACA+
Sbjct: 218 RCCIKSTSRPFTCVITACANA 238
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
I EA VF + V ++ MI G+ + ++L+LF EM + D +++ +++
Sbjct: 51 IDEAREVFNQ--VPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPV----RDVVSWNSMI 104
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
S C G + A FD + + + + MV+ R+G+V +A + Q+P++ TA
Sbjct: 105 SGCVECGDMNTAVKLFDEMPERSVVS----WTAMVNGCFRSGKVDQAERLFYQMPVKDTA 160
Query: 313 SMLGALLNGCMNHGKLDLA 331
+ ++++G + GK+D A
Sbjct: 161 AW-NSMVHGYLQFGKVDDA 178
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 196/413 (47%), Gaps = 34/413 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G+ P TF + KA + E G IH I K ++SD F+ ++LI +Y+
Sbjct: 349 MQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGS 408
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ + F +++ SW SM ID +V+
Sbjct: 409 TEDGMQCFASTSKQDIASWTSM-------------------------------IDCHVQN 437
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ A +F ++ S +P E T+ ++ ACA AL G + Y I + + ++
Sbjct: 438 EQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVK 497
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TS + MYAK G + A VF ++ DV +++MI A HG E+L++F M G
Sbjct: 498 TSSISMYAKSGNMPLANQVFIE--VQNPDVATYSAMISSLAQHGSANEALNIFESMKTHG 555
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
+KP++ +L +L AC HGGLV + +F C+ + + P +H+ C+VD++ R G++++A
Sbjct: 556 IKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDA 615
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ Q ALL+ C + + + V +L+ELEP G YV L N+Y
Sbjct: 616 ENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDS 675
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
A +RE M GVKK P S++ + H F D SHPSS+ IY ML
Sbjct: 676 GVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTML 728
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 5/225 (2%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y KC ++ ARQ+FD MPE++++S++ LI GY + G Y++A+ +F E R + K ++ T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
L C LD G ++H V+ N L + L L+DMY+KCG + +A+ +F
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR--C 209
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA---HGGLVK 262
D WNS+I G+ G +E L+L ++MH G+ ++L AC + G ++
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 263 EAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ K GM ++D+ A+ G + EA + +P
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP 314
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 145/328 (44%), Gaps = 41/328 (12%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
E G+AIH Y K G E D +V ++LD Y
Sbjct: 269 EKGMAIHCYTAKLGMEFD-------------------------------IVVRTALLDMY 297
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY-----DEALAVFEEMRVSGPKPN 141
AK G + A ++F LMP ++V++++ +I G+++ + EA +F +M+ G +P+
Sbjct: 298 AKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPS 357
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
T VL AC+ L+ GR +H + N + ++L+++YA G+ ++ + F
Sbjct: 358 PSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFA 417
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
S D+ W SMI + ++ + DLF ++ ++P+E T ++SACA +
Sbjct: 418 S--TSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG 321
K+G+ + + + A++G + A Q ++ P + A+++
Sbjct: 476 SSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISS 534
Query: 322 CMNHGKLDLAETV--GRKLIELEPHQDG 347
HG + A + K ++P+Q
Sbjct: 535 LAQHGSANEALNIFESMKTHGIKPNQQA 562
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 41/295 (13%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
+LG +HG + G F+ N LI MYS + A +FD ++ VSWNS+
Sbjct: 165 DLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL---- 220
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
I GYVR G +E L + +M G +
Sbjct: 221 ---------------------------ISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALG 253
Query: 147 SVLCACA---HLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
SVL AC + G ++KG +H Y + +V+RT+L+DMYAK G+++EA+ +F
Sbjct: 254 SVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLF--S 311
Query: 204 LMKPSDVFIWNSMIGGFACHGLV-----KESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
LM +V +N+MI GF + E+ LF +M G++P T+ +L AC+
Sbjct: 312 LMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAA 371
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
++ + KN + ++++ A G + Q Q AS
Sbjct: 372 KTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIAS 426
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 227/479 (47%), Gaps = 45/479 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV P+ +T A +CL G +H K G+ D V NSL+ MYS
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 61 IPNARKVFDGIPVK-----------------------------------NLVSWNSMLDG 85
+ +ARKVFD + K N+++WN+M+ G
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 86 YAKCGDISMARQVFDLMP-----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
Y K GD A +F M +++ +W+ +I GY++ G DEAL +F +M+ S P
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
N VT++S+L ACA+L R +H V+ L ++ +L D YAK G I+ + +F
Sbjct: 523 NSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIF 582
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
M+ D+ WNS+IGG+ HG +L LF++M G+ P+ T +++ A G
Sbjct: 583 LG--METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGN 640
Query: 261 VKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
V E F + + + P EH + MV + RA ++ EA QF+ ++ IQ + + L
Sbjct: 641 VDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFL 700
Query: 320 NGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKK 379
GC HG +D+A L LEP +S +YA+ + ++ + +KK
Sbjct: 701 TGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKK 760
Query: 380 SPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYFYDNEGK 438
G S++E+ +H F D+S ++ +Y ++ + S++ + D N E + + EG+
Sbjct: 761 PLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKM-SRLDNRSDQYNGELWI-EEEGR 817
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 175/367 (47%), Gaps = 45/367 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ GV PD FP + + A E G IH + K G S VSNS++ +Y+ +
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGD----ISMARQV------------------ 98
+ A K F + +++++WNS+L Y + G + + +++
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 99 ----------FDLMPEQ-------DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
DLM + DV +W+ +I G + G +AL +F +M ++G PN
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
VT++S + AC+ L +++G +H + +++ SLVDMY+KCG +++A VF
Sbjct: 352 AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
S +K DV+ WNSMI G+ G ++ +LF+ M ++P+ IT+ ++S G
Sbjct: 412 S--VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDE 469
Query: 262 KEAWYFFDCLGKNGMTPK-SEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGA 317
EA F + K+G + + + ++ + G+ EA + ++ P + + +
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 318 LLNGCMN 324
LL C N
Sbjct: 530 LLPACAN 536
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 5/244 (2%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
+L YAKCG I+ AR+VFD M E+++ +WS +I Y R+ + E +F M G P+
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
+ +L CA+ G ++ G+++H VI + L + S++ +YAKCG + A FR
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 240
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
M+ DV WNS++ + +G +E+++L EM G+ P +T+ L+ G
Sbjct: 241 R--MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG---QVAEAYQFLCQIPIQPTASMLGAL 318
A + G+T + M+ + G Q + ++ + + P A + +
Sbjct: 299 DAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSA 358
Query: 319 LNGC 322
++ C
Sbjct: 359 VSAC 362
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 7/265 (2%)
Query: 115 DGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
D R G EA + + G K T + +L +C G++ GR++H P
Sbjct: 54 DYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEP 113
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
V T L+ MYAKCG I +A VF S M+ ++F W++MIG ++ +E LF
Sbjct: 114 DVFV-ETKLLSMYAKCGCIADARKVFDS--MRERNLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
M GV PD+ + +L CA+ G V+ + K GM+ ++ V A+ G
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG--RYVGL 352
++ A +F ++ + + LL C N + E V K +E E G + L
Sbjct: 231 ELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELV--KEMEKEGISPGLVTWNIL 288
Query: 353 SNVYAIFRRWDKARSMREAMERMGV 377
Y + D A + + ME G+
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMETFGI 313
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 193/387 (49%), Gaps = 22/387 (5%)
Query: 54 MYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCL 113
++SS+ I N R N+++ Y+KC D+ A VF E + +W+ +
Sbjct: 307 IHSSYDGIDNVR--------------NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSI 352
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE- 172
I GY + +EA + EM V+G +PN +T+ S+L CA + L G+ H Y++ +
Sbjct: 353 ISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKC 412
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
+L SLVD+YAK G I A V S LM D + S+I G+ G +L L
Sbjct: 413 FKDYTMLWNSLVDVYAKSGKIVAAKQV--SDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF---DCLGKNGMTPKSEHYACMVDV 289
F EM G+KPD +T + +LSAC+H LV E F C + G+ P +H++CMVD+
Sbjct: 471 FKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQC--EYGIRPCLQHFSCMVDL 528
Query: 290 MARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRY 349
RAG +A+A + +P +P+ + LLN C HG + + KL+E++P G Y
Sbjct: 529 YGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYY 588
Query: 350 VGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIY 409
V ++N+YA W K +R M +GVKK PG ++++ F D S P + Y
Sbjct: 589 VLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTY 648
Query: 410 MMLGFIVSQMKHIVDYENQEYYFYDNE 436
+L + MK Y + D E
Sbjct: 649 PLLDGLNQLMKDNAGYAINKVQSSDEE 675
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 163/307 (53%), Gaps = 9/307 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ PD T+P + KA L G +HG I + Y+S +V N+LI MY FR+
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLM----PEQDVLSWSCLIDG 116
+ AR++FD + ++ VSWN++++ YA G S A ++FD M E V++W+ + G
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGG 254
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
++ G+Y AL + MR + V M+ L AC+ +GA+ G+ +H I +
Sbjct: 255 CLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGI 314
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+R +L+ MY+KC ++ AL VFR + + + WNS+I G+A +E+ L EM
Sbjct: 315 DNVRNTLITMYSKCKDLRHALIVFRQ--TEENSLCTWNSIISGYAQLNKSEEASHLLREM 372
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC--LGKNGMTPKSEHYACMVDVMARAG 294
+ G +P+ IT ++L CA ++ F C L + + + +VDV A++G
Sbjct: 373 LVAGFQPNSITLASILPLCARIANLQHG-KEFHCYILRRKCFKDYTMLWNSLVDVYAKSG 431
Query: 295 QVAEAYQ 301
++ A Q
Sbjct: 432 KIVAAKQ 438
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 161/396 (40%), Gaps = 76/396 (19%)
Query: 20 SACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV 77
SAC+ R G+ +H + +G E + L+ YS+F A+ + +
Sbjct: 51 SACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIEN------- 103
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
DI L P L W+ LI Y + ++E +A ++ M G
Sbjct: 104 ------------SDI--------LHP----LPWNVLIASYAKNELFEEVIAAYKRMVSKG 139
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
+P+ T SVL AC + GR++H + + +L + +L+ MY + + A
Sbjct: 140 IRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIAR 199
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+F M D WN++I +A G+ E+ +LF +M GV+ IT+ N++S
Sbjct: 200 RLFDR--MFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITW-NIIS---- 252
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
GG ++ Y +G G+ + ++ +D P A ++G
Sbjct: 253 GGCLQTGNY----VGALGLISRMRNFPTSLD---------------------PVAMIIG- 286
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY-AIFRRWDKARSMREAMERMG 376
L C G + L G+++ L H Y G+ NV + + K + +R A+ +
Sbjct: 287 -LKACSLIGAIRL----GKEIHGLAIHSS--YDGIDNVRNTLITMYSKCKDLRHAL--IV 337
Query: 377 VKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
+++ S + + + +KS +S + ML
Sbjct: 338 FRQTEENSLCTWNSIISGYAQLNKSEEASHLLREML 373
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 207/397 (52%), Gaps = 6/397 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+LR G PD TF L + G HG K G + V NSL+HMY+
Sbjct: 109 ILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGA 168
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A+K+F IP +++VSWNS++ G + GD+ A ++FD MP+++++SW+ +I Y+
Sbjct: 169 LDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGA 228
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ ++++F EM +G + NE T+V +L AC L +GR +H +I L ++V+
Sbjct: 229 NNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVID 288
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+DMY KC + A +F S + + WN MI HG + L+LF M
Sbjct: 289 TALIDMYGKCKEVGLARRIFDS--LSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM 346
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEA 299
++PDE+T++ +L CA GLV + ++ + + + P H CM ++ + AG EA
Sbjct: 347 LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEA 406
Query: 300 YQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY 356
+ L +P + P ++ LL+ G L E++ + LIE +P Y L N+Y
Sbjct: 407 EEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIY 466
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALH 393
++ RW+ +RE ++ + + PG V++ +H
Sbjct: 467 SVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 121/316 (38%), Gaps = 52/316 (16%)
Query: 48 SNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWN-SMLDGYAKCGD----ISMARQVFDLM 102
SNS+ H++ + + +D SW +L ++ GD +S+ R + L
Sbjct: 32 SNSITHLFQVHARLITSGNFWDS-------SWAIRLLKSSSRFGDSSYTVSIYRSIGKLY 84
Query: 103 PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
V Y+ +AL + ++ G P+ T VS++ +D G+
Sbjct: 85 CANPVF------KAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGK 138
Query: 163 MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG--- 219
M H I + L ++ SL+ MY CGA+ A +F + D+ WNS+I G
Sbjct: 139 MCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVE--IPKRDIVSWNSIIAGMVR 196
Query: 220 ----FACHGLVKE------------------------SLDLFSEMHIVGVKPDEITYLNL 251
A H L E S+ LF EM G + +E T + L
Sbjct: 197 NGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLL 256
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
L+AC +KE L + + ++D+ + +V A + + I+
Sbjct: 257 LNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK 316
Query: 312 ASMLGALLNGCMNHGK 327
+ +L C+ HG+
Sbjct: 317 VTWNVMILAHCL-HGR 331
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 214/430 (49%), Gaps = 38/430 (8%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
TF + +ASA L +G +H K G + FVS LI MYS
Sbjct: 226 TFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYS--------------- 270
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
KCGDI AR F+ MPE+ ++W+ +I GY G +EAL +
Sbjct: 271 ----------------KCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLY 314
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
+MR SG ++ T+ ++ L L+ + H +I N +V T+LVD Y+K G
Sbjct: 315 DMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWG 374
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ A +VF + ++ WN+++GG+A HG +++ LF +M V P+ +T+L +
Sbjct: 375 RVDTARYVFDK--LPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAV 432
Query: 252 LSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
LSACA+ GL ++ W F + + +G+ P++ HYACM++++ R G + EA F+ + P++
Sbjct: 433 LSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKT 492
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMRE 370
T +M ALLN C L+L V KL + P + G YV + N+Y + +A + E
Sbjct: 493 TVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLE 552
Query: 371 AMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEY 430
+E G+ P ++VE+ H F++ D+ +E + + V ++ E EY
Sbjct: 553 TLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELME----EISEY 608
Query: 431 YFYDNEGKLL 440
+ + E LL
Sbjct: 609 GYSEEEQHLL 618
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 129/263 (49%), Gaps = 9/263 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N +L + KCG I AR++FD +PE+++ S+ +I G+V G+Y EA +F+ M
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
T +L A A LG++ G+ +H + + + L+DMY+KCG I++A
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY---LNLLSACA 256
F M WN++I G+A HG +E+L L +M GV D+ T + + + A
Sbjct: 282 FEC--MPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLA 339
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
L K+A L +NG + +VD ++ G+V A ++P + S
Sbjct: 340 KLELTKQA---HASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS-WN 395
Query: 317 ALLNGCMNHGKLDLAETVGRKLI 339
AL+ G NHG+ A + K+I
Sbjct: 396 ALMGGYANHGRGTDAVKLFEKMI 418
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 125/291 (42%), Gaps = 68/291 (23%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV D T + + S L K EL H + + G+ES+ + +L+ YS + + A
Sbjct: 320 GVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTA 379
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R VFD +P KN++SWN+++ GYA G
Sbjct: 380 RYVFDKLPRKNIISWNALMGGYAN-------------------------------HGRGT 408
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG---------------RMMHHYVI 169
+A+ +FE+M + PN VT ++VL ACA+ G ++G R MH+
Sbjct: 409 DAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHY--- 465
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES 229
++++ + G + EA+ R +K + V +W +++ AC ++E+
Sbjct: 466 -----------ACMIELLGRDGLLDEAIAFIRRAPLKTT-VNMWAALLN--ACR--MQEN 509
Query: 230 LDL--FSEMHIVGVKPDEI-TYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
L+L + G+ P+++ Y+ + + G EA + L G++
Sbjct: 510 LELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLS 560
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 188/327 (57%), Gaps = 4/327 (1%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N LI Y + R++ AR FD +P KN VSW +M+ GY K GD+ A ++F LM ++D L
Sbjct: 505 NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKL 564
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEM--RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH 166
+ +I Y + G +AL +F +M R S +P+E+T+ SV+ A + LG G +
Sbjct: 565 VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVES 624
Query: 167 YVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
Y+ ++ + + +L TSL+D+Y K G +A +F + + D +++MI G +G+
Sbjct: 625 YITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSN--LNKKDTVSYSAMIMGCGINGMA 682
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
E+ LF+ M + P+ +T+ LLSA +H GLV+E + F+ + + + P ++HY M
Sbjct: 683 TEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIM 742
Query: 287 VDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
VD++ RAG++ EAY+ + +P+QP A + GALL H ++ E ++LE
Sbjct: 743 VDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPT 802
Query: 347 GRYVGLSNVYAIFRRWDKARSMREAME 373
G L+ +Y+ RWD AR++R++++
Sbjct: 803 GYLSHLAMIYSSVGRWDDARTVRDSIK 829
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 162/332 (48%), Gaps = 14/332 (4%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IH K G +V L+ +YS I A+K FD I KN VSWNS+L GY +
Sbjct: 392 GKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLE 451
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G++ AR+VFD +PE+D +SW+ +I Y +KGD A ++F M + P + ++
Sbjct: 452 SGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI-LIGG 510
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
C + ++ Y D V +++ Y K G +Q A +FR LM
Sbjct: 511 YVNCREM------KLARTY-FDAMPQKNGVSWITMISGYTKLGDVQSAEELFR--LMSKK 561
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEM--HIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
D ++++MI + +G K++L LF++M ++PDEIT +++SA + G +
Sbjct: 562 DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTW 621
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ ++G+ ++D+ + G A+A++ + + T S A++ GC +G
Sbjct: 622 VESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS-YSAMIMGCGING 680
Query: 327 KLDLAETVGRKLIELE-PHQDGRYVGLSNVYA 357
A ++ +IE + P + GL + Y+
Sbjct: 681 MATEANSLFTAMIEKKIPPNVVTFTGLLSAYS 712
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 40/251 (15%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ PD +T + A++ L G + YIT+ G + D +S SLI +Y D A
Sbjct: 596 IQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAF 655
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
K+F + K+ VS+++M+ G CG MA E
Sbjct: 656 KMFSNLNKKDTVSYSAMIMG---CGINGMA----------------------------TE 684
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A ++F M PN VT +L A +H G + +G + + D+ L + +VD
Sbjct: 685 ANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVD 744
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM---HIVGVK 242
M + G ++EA + +S M+P + +W +++ H V+ F E+ H V ++
Sbjct: 745 MLGRAGRLEEAYELIKSMPMQP-NAGVWGALLLASGLHNNVE-----FGEIACSHCVKLE 798
Query: 243 PDEITYLNLLS 253
D YL+ L+
Sbjct: 799 TDPTGYLSHLA 809
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 6/180 (3%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
++ +++ D SW CL+ + + E + V+ +M SG P+ + SVL A
Sbjct: 323 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 382
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
C + + G+ +H + N L + ++T LV +Y++ G I+ A F + +
Sbjct: 383 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDD--IAEKNTV 440
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
WNS++ G+ G + E+ +F ++ + D +++ ++S+ A G + A F +
Sbjct: 441 SWNSLLHGYLESGELDEARRVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAM 496
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 203/387 (52%), Gaps = 39/387 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD TF + A L + + G IHG + G S
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGS--------------------- 298
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
N+V +S+LD Y KCG + ARQVF+ M +++ +SWS L+ GY + G+++
Sbjct: 299 ----------NVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHE 348
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+A+ +F EM + + +VL ACA L A+ G+ +H + +++ ++L+
Sbjct: 349 KAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALI 404
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
D+Y K G I A V+ M ++ WN+M+ A +G +E++ F++M G+KPD
Sbjct: 405 DLYGKSGCIDSASRVYSK--MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPD 462
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
I+++ +L+AC H G+V E +F + K+ G+ P +EHY+CM+D++ RAG EA L
Sbjct: 463 YISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLL 522
Query: 304 CQIPIQPTASMLGALLNGC-MNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRW 362
+ + AS+ G LL C N +AE + ++++ELEP YV LSN+Y R
Sbjct: 523 ERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRH 582
Query: 363 DKARSMREAMERMGVKKSPGYSFVEMH 389
A ++R+ M R GV K+ G S+++ H
Sbjct: 583 GDALNIRKLMVRRGVAKTVGQSWIDAH 609
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 170/364 (46%), Gaps = 72/364 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ + T KA + L + LG HG + G+E + F+S++L ++Y R+
Sbjct: 154 MVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNRE 213
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+AR+VFD +P +++ W ++L ++K DL
Sbjct: 214 PVDARRVFDEMPEPDVICWTAVLSAFSK----------NDL------------------- 244
Query: 121 GDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
Y+EAL +F M R G P+ T +VL AC +L L +G+ +H +I N + +V+
Sbjct: 245 --YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+SL+DMY KCG+++EA VF +G+ K + V W++++GG+ +G ++++++F EM
Sbjct: 303 ESSLLDMYGKCGSVREARQVF-NGMSKKNSVS-WSALLGGYCQNGEHEKAIEIFREME-- 358
Query: 240 GVKPDEITYLNLLSACA-----------HGGLVKEAWY--------FFDCLGKNGMTPKS 280
+ D + +L ACA HG V+ + D GK+G +
Sbjct: 359 --EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSA 416
Query: 281 EH------------YACMVDVMARAGQVAEAYQF---LCQIPIQPTASMLGALLNGCMNH 325
+ M+ +A+ G+ EA F + + I+P A+L C +
Sbjct: 417 SRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHT 476
Query: 326 GKLD 329
G +D
Sbjct: 477 GMVD 480
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 145/313 (46%), Gaps = 34/313 (10%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G+ H ++ K+G E+DR V NSL+ +Y F+ P R+
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLY--FKLGPGMRET--------------------- 116
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
R+VFD +D +SW+ ++ GYV ++ +AL VF EM G NE T+ S
Sbjct: 117 -------RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSA 169
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ AC+ LG + GR H VI + + ++L +Y +A VF M
Sbjct: 170 VKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE--MPEP 227
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHI-VGVKPDEITYLNLLSACAHGGLVKEAWYF 267
DV W +++ F+ + L +E+L LF MH G+ PD T+ +L+AC + +K+
Sbjct: 228 DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEI 287
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
L NG+ + ++D+ + G V EA Q + + + S ALL G +G+
Sbjct: 288 HGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW-SALLGGYCQNGE 346
Query: 328 LDLAETVGRKLIE 340
+ A + R++ E
Sbjct: 347 HEKAIEIFREMEE 359
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 197/380 (51%), Gaps = 41/380 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV PD TFP + KA + ++G AIH + K G+ D +V N+L+ MY
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMY----- 240
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCGDI AR VFD++P +D +SW+ ++ GY+
Sbjct: 241 --------------------------AKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EAL +F M +G +P++V + SVL A + + GR +H +VI + L +
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+ +Y+K G + +A +F L + D WN++I + H L F +MH
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLER--DTVSWNAII---SAHSKNSNGLKYFEQMHRAN 386
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
KPD IT++++LS CA+ G+V++ F + K G+ PK EHYACMV++ RAG + EA
Sbjct: 387 AKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEA 446
Query: 300 YQFLCQ-IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
Y + Q + ++ ++ GALL C HG D+ E ++L ELEP + + L +Y+
Sbjct: 447 YSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSK 506
Query: 359 FRRWDKARSMREAMERMGVK 378
+R + +R+ M G++
Sbjct: 507 AKRAEDVERVRQMMVDRGLE 526
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 8/210 (3%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPV----KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
SL+ S R I + +V IP NL + ++ YA CG +A +VFD M ++
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 106 DV--LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRM 163
D +W+ LI GY G Y++A+A++ +M G KP+ T VL AC +G++ G
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+H ++ + + +LV MYAKCG I +A +VF ++ D WNSM+ G+ H
Sbjct: 217 IHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVF--DMIPHKDYVSWNSMLTGYLHH 274
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
GL+ E+LD+F M G++PD++ ++L+
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVLA 304
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 12/261 (4%)
Query: 125 EAL-AVFEEMRVSGPKPNEVT----MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
EAL +V ++ S K +T S+L C L A+D G +HH + L L +
Sbjct: 70 EALDSVITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGI 129
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+ LV +YA CG + A VF + S F WNS+I G+A G ++++ L+ +M
Sbjct: 130 SSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAED 189
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
GVKPD T+ +L AC G V+ L K G +V + A+ G + +A
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPHQDGRYVGLSNVYA 357
IP + S ++L G ++HG L A + R +++ +EP + V +S+V A
Sbjct: 250 RNVFDMIPHKDYVSW-NSMLTGYLHHGLLHEALDIFRLMVQNGIEPDK----VAISSVLA 304
Query: 358 IFRRWDKARSMREAMERMGVK 378
+ R + + R G++
Sbjct: 305 RVLSFKHGRQLHGWVIRRGME 325
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 187/360 (51%), Gaps = 35/360 (9%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
++G+++HGY K+G + V N LI MYS F
Sbjct: 254 DIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFD--------------------------- 286
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK-PNEVTM 145
D+ +F+ + E ++SW+ +I G V+ G A VF +M ++G P+ +T+
Sbjct: 287 ----DVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITI 342
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
S+L C+ L L+ G+ +H Y + N + T+L+DMYAKCG +A VF+S +
Sbjct: 343 ASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKS--I 400
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
K WNSMI G++ GL +L + EM G+KPDEIT+L +LSAC HGG V E
Sbjct: 401 KAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK 460
Query: 266 YFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
F + K G++P +HYA MV ++ RA EA + ++ I+P +++ GALL+ C+
Sbjct: 461 ICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACII 520
Query: 325 HGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
H +L++ E V RK+ L+ G YV +SN+YA WD +R M+ G G S
Sbjct: 521 HRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVS 580
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE+D + W+ LI GY R G +A +F M G P+ T+V++L C G + +G
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
R +H + L L ++ +L+ Y+KC + A +FR MK WN+MIG ++
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE--MKDKSTVSWNTMIGAYS 118
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
GL +E++ +F M V+ +T +NLLSA
Sbjct: 119 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 151
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ PD +T L + L LG +HGY + +E++ FV +LI MY+ +
Sbjct: 330 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 389
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A VF I +WNSM+ GY+
Sbjct: 390 EVQAESVFKSIKAPCTATWNSMISGYS-------------------------------LS 418
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVL 179
G AL+ + EMR G KP+E+T + VL AC H G +D+G++ +I + TL
Sbjct: 419 GLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQH 478
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+V + + EAL++ +KP D +W +++ H
Sbjct: 479 YALMVGLLGRACLFTEALYLIWKMDIKP-DSAVWGALLSACIIH 521
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 118/250 (47%), Gaps = 19/250 (7%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
V ++ S++ Y++CG + A +++ + ++ + ++ Y KGD D A+ F +
Sbjct: 168 VNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSK 227
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
R K + V +V +L C +D G +H Y I + L ++ L+ MY+K
Sbjct: 228 TRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDD 287
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNL 251
++ L +F ++ + + WNS+I G G + ++F +M + G+ PD IT +L
Sbjct: 288 VETVLFLFEQ--LQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASL 345
Query: 252 LSACAHGGLVKEAWYFFDCLGK--NGMTPK----SEHYAC--MVDVMARAGQVAEAYQFL 303
L+ C+ + LGK +G T + +E++ C ++D+ A+ G +A
Sbjct: 346 LAGCSQLCCLN--------LGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVF 397
Query: 304 CQIPIQPTAS 313
I TA+
Sbjct: 398 KSIKAPCTAT 407
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 196/384 (51%), Gaps = 7/384 (1%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ +TF A A LL + G +HG + K ++ + V +LI MYS R +A V
Sbjct: 229 PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 68 FDGIP-VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGD 122
F + +NL+SWNS++ G G A ++F+ + + D +W+ LI G+ + G
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
EA FE M P+ + S+L AC+ + L G+ +H +VI + + TS
Sbjct: 349 VIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTS 408
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+DMY KCG A +F KP D WN MI G+ HG + ++++F + V+
Sbjct: 409 LIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE 468
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQ 301
P T+ +LSAC+H G V++ F + + G P +EH CM+D++ R+G++ EA +
Sbjct: 469 PSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKE 528
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
+ Q+ ++ +LL C H L E KL ELEP +V LS++YA R
Sbjct: 529 VIDQMSEPSSSVYS-SLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALER 587
Query: 362 WDKARSMREAMERMGVKKSPGYSF 385
W+ S+R+ +++ + K PG S
Sbjct: 588 WEDVESIRQVIDQKQLVKLPGLSL 611
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 128/253 (50%), Gaps = 33/253 (13%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
E G+ +H K+G+E + +V SL+ MYS
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYS------------------------------ 175
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR-VSGPKPNEVTM 145
+CG+ +A ++F+ +P + V++++ I G + G + +VF MR S +PN+VT
Sbjct: 176 -RCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTF 234
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
V+ + ACA L L GR +H V+ E ++ T+L+DMY+KC + A VF + L
Sbjct: 235 VNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVF-TELK 293
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
++ WNS+I G +G + +++LF ++ G+KPD T+ +L+S + G V EA+
Sbjct: 294 DTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAF 353
Query: 266 YFFDCLGKNGMTP 278
FF+ + M P
Sbjct: 354 KFFERMLSVVMVP 366
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 147/343 (42%), Gaps = 59/343 (17%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ TFP L K+ A L G +H + K G+ D F + +L+ MY + + +A KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
D MPE+ + S + + G + G +A
Sbjct: 89 L-------------------------------DEMPERGIASVNAAVSGLLENGFCRDAF 117
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F + RVSG N VT+ SVL C G ++ G +H + + + + + TSLV MY
Sbjct: 118 RMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMY 174
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH-IVGVKPDEI 246
++CG A +F + V +N+ I G +G++ +F+ M +P+++
Sbjct: 175 SRCGEWVLAARMFEK--VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDV 232
Query: 247 TYLNLLSACA-----------HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
T++N ++ACA HG ++K+ + F +G ++D+ ++
Sbjct: 233 TFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG-----------TALIDMYSKCRC 281
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
AY ++ ++++G M +G+ + A + KL
Sbjct: 282 WKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 36/204 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V + P L A + + + G IHG++ KA E D FV SLI MY
Sbjct: 359 MLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGL 418
Query: 61 IPNARKVFDGI--PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
AR++FD K+ V WN M+ GY K G+ A ++F+L+ E+ V
Sbjct: 419 SSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKV----------- 467
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN--ELPLT 176
+P+ T +VL AC+H G ++KG + + + P T
Sbjct: 468 --------------------EPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPST 507
Query: 177 LVLRTSLVDMYAKCGAIQEALHVF 200
+ ++D+ + G ++EA V
Sbjct: 508 EHI-GCMIDLLGRSGRLREAKEVI 530
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 15/211 (7%)
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
PN+ T +L +CA LG + +GR++H V+ + + T+LV MY K + +AL V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA--H 257
M + N+ + G +G +++ +F + + G + +T ++L C
Sbjct: 89 LDE--MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIE 146
Query: 258 GGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
GG+ CL K+G + +V + +R G+ A + ++P + +
Sbjct: 147 GGMQ------LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVT-YN 199
Query: 317 ALLNGCMNHGKLDLAETV---GRKLIELEPH 344
A ++G M +G ++L +V RK EP+
Sbjct: 200 AFISGLMENGVMNLVPSVFNLMRKFSSEEPN 230
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 181/313 (57%), Gaps = 9/313 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+++ Y K G IS AR++FD +DV++W+C+ID Y + G +E + + +M+ K
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK 325
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
PN T V +L +CA+ A GR + + + + L +L T+LVDMYAK G +++A+ +
Sbjct: 326 PNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEI 385
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM--HIVGVKPDEITYLNLLSACAH 257
F MK DV W +MI G+ HGL +E++ LF++M V+P+EIT+L +L+AC+H
Sbjct: 386 FNR--MKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSH 443
Query: 258 GGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
GGLV E F + + TPK EHY C+VD++ RAGQ+ EAY+ + +PI ++
Sbjct: 444 GGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWR 503
Query: 317 ALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMG 376
ALL C +G DL E+V +L E+ + L+ +A+ +K S+ + +
Sbjct: 504 ALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEK--SLDNELNKG- 560
Query: 377 VKKSPGYSFVEMH 389
+K GYS +E+
Sbjct: 561 -RKEAGYSAIEIE 572
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 153/337 (45%), Gaps = 35/337 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ D +F K+ + L +G +HG ++G+ + N+LIH Y I +A
Sbjct: 120 GLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDA 179
Query: 65 RKVFDGIPVK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
RKVFD +P + V+++++++GY + ++A +F +M + +V+
Sbjct: 180 RKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVV--------------- 224
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
N T++S L A + LG L H I L L L L T+L
Sbjct: 225 ----------------VNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITAL 268
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ MY K G I A +F + K DV WN MI +A GL++E + L +M +KP
Sbjct: 269 IGMYGKTGGISSARRIFDCAIRK--DVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKP 326
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ T++ LLS+CA+ D L + + + +VD+ A+ G + +A +
Sbjct: 327 NSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIF 386
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
++ + S A+++G HG A T+ K+ E
Sbjct: 387 NRMKDKDVKSWT-AMISGYGAHGLAREAVTLFNKMEE 422
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 145/386 (37%), Gaps = 76/386 (19%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
IHGY+ K G + D F + L+ +SS DI A +F+ + NL +N+M
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTM--------- 96
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
I GY + + A +VF ++R G + + ++ L +
Sbjct: 97 ----------------------IRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKS 134
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
C+ + G +H + + + LR +L+ Y CG I +A VF + + D
Sbjct: 135 CSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDE-MPQSVDAV 193
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA----------------C 255
+++++ G+ +LDLF M V + T L+ LSA C
Sbjct: 194 TFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLC 253
Query: 256 AHGGL-------------------VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
GL + A FDC + + + CM+D A+ G +
Sbjct: 254 IKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVT----WNCMIDQYAKTGLL 309
Query: 297 AEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRY-VGL 352
E L Q+ ++P +S LL+ C + TV L E D L
Sbjct: 310 EECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTAL 369
Query: 353 SNVYAIFRRWDKARSMREAMERMGVK 378
++YA +KA + M+ VK
Sbjct: 370 VDMYAKVGLLEKAVEIFNRMKDKDVK 395
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 211/392 (53%), Gaps = 39/392 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G PD TF L +AS + E+ +HG K G+ S++LI
Sbjct: 205 MLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGR----SSALIR------- 253
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
S+++ Y KCG ++ A ++ + ++D+LS + LI G+ ++
Sbjct: 254 --------------------SLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQ 293
Query: 121 GD-YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI-DNELPLTLV 178
+ +A +F++M K +EV + S+L C + ++ GR +H + + +++ +
Sbjct: 294 NNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVA 353
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L SL+DMYAK G I++A+ F MK DV W S+I G+ HG ++++DL++ M
Sbjct: 354 LGNSLIDMYAKSGEIEDAVLAFEE--MKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEH 411
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVA 297
+KP+++T+L+LLSAC+H G + W +D + K+G+ + EH +C++D++AR+G +
Sbjct: 412 ERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLE 471
Query: 298 EAYQFLCQIP--IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
EAY + + ++S GA L+ C HG + L++ +L+ +EP + Y+ L++V
Sbjct: 472 EAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASV 531
Query: 356 YAIFRRWDKARSMREAMERMG-VKKSPGYSFV 386
YA WD A + R+ M+ G K+PGYS V
Sbjct: 532 YAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 103/180 (57%), Gaps = 2/180 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NL + ++D Y K GD+ AR++FD + ++DV+SW+ +I + R G + +AL +F+EM
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH 105
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
K N+ T SVL +C LG L +G +H V L++R++L+ +YA+CG ++
Sbjct: 106 REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKME 165
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
EA F S MK D+ WN+MI G+ + S LF M G KPD T+ +LL A
Sbjct: 166 EARLQFDS--MKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 141/345 (40%), Gaps = 60/345 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V + T+ + K+ L + G+ IHG + K + V ++L+ +Y+
Sbjct: 104 MHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGK 163
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYA--KCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ AR FD + ++LVSWN+M+DGY C D S
Sbjct: 164 MEEARLQFDSMKERDLVSWNAMIDGYTANACADTS------------------------- 198
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
++F+ M G KP+ T S+L A + L+ +H I +
Sbjct: 199 --------FSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSA 250
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA-CHGLVKESLDLFSEMH 237
L SLV+ Y KCG++ A + K D+ ++I GF+ + ++ D+F +M
Sbjct: 251 LIRSLVNAYVKCGSLANAWKLHEG--TKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 238 IVGVKPDEITYLNLLSACA-----------HGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
+ K DE+ ++L C HG +K + FD N +
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNS----------L 358
Query: 287 VDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+D+ A++G++ +A ++ + S +L+ G HG + A
Sbjct: 359 IDMYAKSGEIEDAVLAFEEMKEKDVRSWT-SLIAGYGRHGNFEKA 402
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
C++ + ++H I N L L+ L+D+Y K G ++ A +F + DV
Sbjct: 22 CSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDR--ISKRDVV 79
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
W +MI F+ G ++L LF EMH VK ++ TY ++L +C G +KE +
Sbjct: 80 SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEA 299
K + ++ + AR G++ EA
Sbjct: 140 EKGNCAGNLIVRSALLSLYARCGKMEEA 167
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 207/415 (49%), Gaps = 38/415 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M R V P+ +T+ L+ +AC + + G IH + K G ES+ + ++L+ MYS
Sbjct: 247 MRRGLVHPNSVTY--LSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYS-- 302
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
KCG I A +F+ E D +S + ++ G
Sbjct: 303 -----------------------------KCGSIEDAWTIFESTTEVDEVSMTVILVGLA 333
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ G +EA+ F M +G + + + +VL +L G+ +H VI +
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ L++MY+KCG + ++ VFR M + WNSMI FA HG +L L+ EM
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRR--MPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTT 451
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVA 297
+ VKP ++T+L+LL AC+H GL+ + + + + +G+ P++EHY C++D++ RAG +
Sbjct: 452 LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLK 511
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EA F+ +P++P + ALL C HG ++ E +L + P ++ ++N+Y+
Sbjct: 512 EAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYS 571
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
+W + + M+ MGV K G S +E+ H FV DK HP +E IY +L
Sbjct: 572 SRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVL 626
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Query: 76 LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
LV WNS+L YAKCG + A ++FD MP +DV+S + + G++R + + + + M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
SG + T+ VL C +M+H I + + + L+ Y KCG
Sbjct: 150 SG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
VF M +V ++I G + L ++ L LFS M V P+ +TYL+ L+AC
Sbjct: 209 GRGVFDG--MSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAAC 266
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ + E L K G+ + + ++D+ ++ G + +A+
Sbjct: 267 SGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIF 314
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
K + N ++ Y KCG R VFD M ++V++ + +I G + +++ L +F M
Sbjct: 188 KEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLM 247
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
R PN VT +S L AC+ + +G+ +H + + L + ++L+DMY+KCG+I
Sbjct: 248 RRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSI 307
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
++A +F S D ++ G A +G +E++ F M GV+ D
Sbjct: 308 EDAWTIFES--TTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID 356
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 203/398 (51%), Gaps = 35/398 (8%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD TF A+A + G +HG +TK GYE FV +L+ MY R+ +A+KV
Sbjct: 400 PDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKV 459
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD+M E+DV+ W+ +I G+ R G+ + A+
Sbjct: 460 -------------------------------FDVMKERDVVLWTEMIVGHSRLGNSELAV 488
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
F EM + + ++ SV+ AC+ + L +G + H I + + +LVDMY
Sbjct: 489 QFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMY 548
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
K G + A +F L D+ WNSM+G ++ HG+V+++L F ++ G PD +T
Sbjct: 549 GKNGKYETAETIF--SLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVT 606
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
YL+LL+AC+H G + + ++ + + G+ +HY+CMV+++++AG V EA + + Q P
Sbjct: 607 YLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP 666
Query: 308 I-QPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
A + LL+ C+N L + ++++L+P ++ LSN+YA+ RW+
Sbjct: 667 PGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVA 726
Query: 367 SMREAMERMGVKKSPGYSFVEM-HGALHRFVAHDKSHP 403
MR + + K PG S++E+ + F + D+S+P
Sbjct: 727 EMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNP 764
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 128/263 (48%), Gaps = 40/263 (15%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ TF L + A L +G +++ I K GY + V S++ MYSS
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSS-------- 246
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
CGD+ AR++FD + +D ++W+ +I G ++ ++
Sbjct: 247 -----------------------CGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIED 283
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
L F M +SG P + T VL C+ LG+ G+++H +I ++ L L +L+D
Sbjct: 284 GLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLD 343
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE-MHIVGVKPD 244
MY CG ++EA +VF G + ++ WNS+I G + +G ++++ ++ + + +PD
Sbjct: 344 MYCSCGDMREAFYVF--GRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPD 401
Query: 245 EITYLNLLSACA------HGGLV 261
E T+ +SA A HG L+
Sbjct: 402 EYTFSAAISATAEPERFVHGKLL 424
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 16/278 (5%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE-ALAVFEEMRVSGP 138
N+++ Y +CG + AR+VFD MP ++V+S++ L Y R D+ A + M
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
KPN T S++ CA L + G ++ +I +V++TS++ MY+ CG ++ A
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH- 257
+F + D WN+MI G + +++ L F M + GV P + TY +L+ C+
Sbjct: 256 IF--DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 258 -----GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
G L+ D L + ++D+ G + EA+ +I P
Sbjct: 314 GSYSLGKLIHARIIVSDSLADLPLDN------ALLDMYCSCGDMREAFYVFGRIH-NPNL 366
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYV 350
++++GC +G + A + R+L+ + + Y
Sbjct: 367 VSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYT 404
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCL--IDGYVRKGD--YDEALAVFEEMRV 135
N+++ Y +C + AR+VFD MP++++++ L + YV G + + + + +
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 136 SGPKPNEV--TMVSVLCACAHLGALDKGRMMHHYVID------NELPLTLVLRTSLVDMY 187
NE+ ++V + C + L + R +H V+ E P +L+ MY
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYA---NNNLISMY 142
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH-GLVKESLDLFSEMHIVGVKPDEI 246
+CG++++A VF M +V +N++ ++ + + L + M VKP+
Sbjct: 143 VRCGSLEQARKVFDK--MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 247 TYLNLLSACA 256
T+ +L+ CA
Sbjct: 201 TFTSLVQVCA 210
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 173/303 (57%), Gaps = 3/303 (0%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y +CG++S++R +F+ +DV+ WS +I GY GD E + + +MR G + N VT+
Sbjct: 297 YCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTL 356
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
++++ AC + L +H ++ ++L +L+DMYAKCG++ A VF +
Sbjct: 357 LAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE--L 414
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
D+ W+SMI + HG E+L++F M G + D++ +L +LSAC H GLV+EA
Sbjct: 415 TEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQ 474
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
F GK M EHYAC ++++ R G++ +A++ +P++P+A + +LL+ C H
Sbjct: 475 TIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETH 534
Query: 326 GKLDLA-ETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
G+LD+A + + +L++ EP YV LS ++ + A +R M+R + K G+S
Sbjct: 535 GRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFS 594
Query: 385 FVE 387
+E
Sbjct: 595 KIE 597
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 149/360 (41%), Gaps = 73/360 (20%)
Query: 21 ACLLKRE---LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV 77
AC ++E LG +H KAG + D VSNSLI MY+ F +RK
Sbjct: 55 ACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKF-----SRK----------- 98
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
YA R+VFD M +D +S+ +I+ + G EA+ + +EM G
Sbjct: 99 --------YA-------VRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYG 143
Query: 138 PKPNEVTMVSVLCACAHLGALDK-GRMMHHYV-IDNELPLTLVLRTSLVDMYAKCGAIQE 195
P + S+L C +G+ K RM H V +D + +++L T+LVDMY K
Sbjct: 144 FIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAA 203
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
A HVF M+ + W +MI G + + +DLF M ++P+ +T L++L AC
Sbjct: 204 AFHVFDQ--MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Query: 256 AH----GGLVKEAWYF---FDCLGKNGMTPKSEHYAC----------------------- 285
LVKE F C +T C
Sbjct: 262 VELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMW 321
Query: 286 --MVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
M+ A G +E L Q+ I+ + L A+++ C N L A TV ++++
Sbjct: 322 SSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILK 381
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 122/248 (49%), Gaps = 4/248 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+++D Y K D + A VFD M ++ +SW+ +I G V +Y+ + +F M+ +
Sbjct: 189 TALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLR 248
Query: 140 PNEVTMVSVLCACAHLG-ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PN VT++SVL AC L + +H + + L + + MY +CG + +
Sbjct: 249 PNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRV 308
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
+F + K DV +W+SMI G+A G E ++L ++M G++ + +T L ++SAC +
Sbjct: 309 LFETS--KVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNS 366
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
L+ A + K G ++D+ A+ G ++ A + ++ + S ++
Sbjct: 367 TLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSW-SSM 425
Query: 319 LNGCMNHG 326
+N HG
Sbjct: 426 INAYGLHG 433
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++D YAKCG +S AR+VF + E+D++SWS +I+ Y G EAL +F+ M G +
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHE 451
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+++ +++L AC H G +++ + + +P+TL +++ + G I +A V
Sbjct: 452 VDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEV 511
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHG 224
+ MKPS IW+S++ HG
Sbjct: 512 TINMPMKPS-ARIWSSLLSACETHG 535
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 209/422 (49%), Gaps = 40/422 (9%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ TF + KA + L + +G IH + +G
Sbjct: 127 VPPNEYTFASVFKACSALAESRIGKNIHARLEISGLR----------------------- 163
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE--QDVLSWSCLIDGYVRKGDY 123
+N+V +S++D Y KC D+ AR+VFD M ++V+SW+ +I Y +
Sbjct: 164 --------RNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARG 215
Query: 124 DEALAVFEEMR--VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
EA+ +F ++ + N+ + SV+ AC+ LG L G++ H V V+ T
Sbjct: 216 HEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVAT 275
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
SL+DMYAKCG++ A +F ++ V + SMI A HGL + ++ LF EM +
Sbjct: 276 SLLDMYAKCGSLSCAEKIFLR--IRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRI 333
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAY 300
P+ +T L +L AC+H GLV E + + K G+ P S HY C+VD++ R G+V EAY
Sbjct: 334 NPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAY 393
Query: 301 QFLCQIPI--QPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
+ I + + A + GALL+ HG++++ ++LI+ Y+ LSN YA+
Sbjct: 394 ELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAV 453
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
W+ + S+R M+R G K S++E +++ F A D S S +I L + +
Sbjct: 454 SGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKR 513
Query: 419 MK 420
MK
Sbjct: 514 MK 515
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 120/237 (50%), Gaps = 3/237 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP- 138
N ++ Y K +I+ AR++FD M E +V+SW+ +I GY G AL++F++M P
Sbjct: 68 NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPV 127
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PNE T SV AC+ L G+ +H + + L +V+ +SLVDMY KC ++ A
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARR 187
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH--IVGVKPDEITYLNLLSACA 256
VF S + +V W SMI +A + E+++LF + + + ++ +++SAC+
Sbjct: 188 VFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACS 247
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
G ++ + + G + ++D+ A+ G ++ A + +I S
Sbjct: 248 SLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVIS 304
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 191/382 (50%), Gaps = 40/382 (10%)
Query: 31 AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
+IHG I + GYES N V+ +S++D Y C
Sbjct: 349 SIHGVIIRRGYES-------------------------------NEVALSSLIDAYTSCS 377
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
+ A V D M +DV+S S +I G G DEA+++F MR PN +T++S+L
Sbjct: 378 LVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLN 434
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLT-LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
AC+ L + H I L + + + TS+VD YAKCGAI+ A F + +
Sbjct: 435 ACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQ--ITEKN 492
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
+ W +I +A +GL ++L LF EM G P+ +TYL LSAC HGGLVK+ F
Sbjct: 493 IISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFK 552
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP--IQPTASMLGALLNGCMNH-G 326
+ + P +HY+C+VD+++RAG++ A + + +P ++ AS GA+L+GC N
Sbjct: 553 SMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFK 612
Query: 327 KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
KL + V +++ELEP Y+ S+ +A + W+ MR ++ V+ GYS V
Sbjct: 613 KLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 672
Query: 387 EMHGALHRFVAHDKSHPSSEQI 408
RF+A DK S ++
Sbjct: 673 REGNLAKRFLAGDKLSQSDSEL 694
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 142/327 (43%), Gaps = 67/327 (20%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IHGY+ ++G+ V NS++ MY+ D +ARK+FD + ++++S
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSARKLFDEMSERDVIS---------- 192
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVS 147
WS +I YV+ + L +F+EM + +P+ VT+ S
Sbjct: 193 ---------------------WSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTS 231
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLR-TSLVDMYAKCGAIQEALHVFRSGLMK 206
VL AC + +D GR +H + I L V SL+DMY+K + A VF +
Sbjct: 232 VLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR 291
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA---------- 256
++ WNS++ GF + E+L++F M V+ DE+T ++LL C
Sbjct: 292 --NIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS 349
Query: 257 -HGGLVK--------------EAWYFFDCLGKNGMTPKSEHY------ACMVDVMARAGQ 295
HG +++ +A+ + G S Y + M+ +A AG+
Sbjct: 350 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGR 409
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGC 322
EA C + P A + +LLN C
Sbjct: 410 SDEAISIFCHMRDTPNAITVISLLNAC 436
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 38/302 (12%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYE-SDRFVSNSLIHMYSSFRDIPNARK 66
PD +T + KA + ++G ++HG+ + G++ +D FV NSLI M
Sbjct: 224 PDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDM------------ 271
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
Y+K D+ A +VFD ++++SW+ ++ G+V YDEA
Sbjct: 272 -------------------YSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEA 312
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
L +F M + +EVT+VS+L C + +H +I V +SL+D
Sbjct: 313 LEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDA 372
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
Y C + +A V S M DV ++MI G A G E++ +F M P+ I
Sbjct: 373 YTSCSLVDDAGTVLDS--MTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAI 427
Query: 247 TYLNLLSACA-HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
T ++LL+AC+ L W + ++ +VD A+ G + A + Q
Sbjct: 428 TVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQ 487
Query: 306 IP 307
I
Sbjct: 488 IT 489
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 77 VSW----NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
+SW NS+ D Y KCGD+ + FD M +D +SW+ ++ G + G +E L F +
Sbjct: 58 LSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSK 117
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
+RV G +PN T+V V+ AC L G +H YVI + ++ S++ MYA +
Sbjct: 118 LRVWGFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDS 175
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNL 251
+ A +F M DV W+ +I + L LF EM H +PD +T ++
Sbjct: 176 LS-ARKLFDE--MSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSV 232
Query: 252 LSACA 256
L AC
Sbjct: 233 LKACT 237
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 171/288 (59%), Gaps = 8/288 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR+GV P+ T+ + A + L ++ I + + FV +L+ M++ RD
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRD 314
Query: 61 IPNARKVFDGIPV-KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
I +AR++F+ + +NLV+WN+M+ GY + GD+S ARQ+FD MP+++V+SW+ LI GY
Sbjct: 315 IQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAH 374
Query: 120 KGDYDEALAVFEEMRVSG-PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
G A+ FE+M G KP+EVTM+SVL AC H+ L+ G + Y+ N++ L
Sbjct: 375 NGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDS 434
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
SL+ MYA+ G + EA VF MK DV +N++ FA +G E+L+L S+M
Sbjct: 435 GYRSLIFMYARGGNLWEAKRVFDE--MKERDVVSYNTLFTAFAANGDGVETLNLLSKMKD 492
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
G++PD +TY ++L+AC GL+KE F K+ P ++HYACM
Sbjct: 493 EGIEPDRVTYTSVLTACNRAGLLKEGQRIF----KSIRNPLADHYACM 536
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 165/359 (45%), Gaps = 67/359 (18%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R G+ PD +FP + K++ G+ + K G+ D +V N ++ MY +
Sbjct: 99 RCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVE 153
Query: 63 NARKVFDGI-------------------------------PVKNLVSWNSMLDGYAKCGD 91
+ARKVFD I P ++VSW M+ G+AK D
Sbjct: 154 SARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKD 213
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+ AR+ FD MPE+ V+SW+ ++ GY + G ++AL +F +M G +PNE T V V+ A
Sbjct: 214 LENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR---------- 201
C+ R + + + + L ++T+L+DM+AKC IQ A +F
Sbjct: 274 CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVT 333
Query: 202 -----SGLMKPSD---------------VFIWNSMIGGFACHGLVKESLDLFSEMHIVG- 240
SG + D V WNS+I G+A +G +++ F +M G
Sbjct: 334 WNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
KPDE+T +++LSAC H ++ D + KN + Y ++ + AR G + EA
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEA 452
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 184/331 (55%), Gaps = 14/331 (4%)
Query: 66 KVFDGIPVKNLVSW-----NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ F G+ +K+L N+++ Y +C DI A +VF L+ + ++ SW+C+I +
Sbjct: 601 RCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQN 660
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
E +F +++ +PNE+T V +L A LG+ G H ++I +
Sbjct: 661 KAGREVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS 717
Query: 181 TSLVDMYAKCGAIQEALHVFR-SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+LVDMY+ CG ++ + VFR SG+ + + WNS+I HG+ +++++LF E+
Sbjct: 718 AALVDMYSSCGMLETGMKVFRNSGV---NSISAWNSVISAHGFHGMGEKAMELFKELSSN 774
Query: 240 G-VKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVA 297
++P++ ++++LLSAC+H G + E ++ + K G+ P +EH +VD++ RAG++
Sbjct: 775 SEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLR 834
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EAY+F+ I A + GALL+ C HG L + V L E+EP Y+ L+N Y
Sbjct: 835 EAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYV 894
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEM 388
W++A +R+ +E +KK PGYS +++
Sbjct: 895 GLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVS--NSLIHMYSSF 58
M G D +TF + A + + + LG ++HG + K+GY + VS NS+I MYS
Sbjct: 280 MTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYS-- 337
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
KCGD A VF+ + +DV+S + +++G+
Sbjct: 338 -----------------------------KCGDTEAAETVFEELVCRDVISSNAILNGFA 368
Query: 119 RKGDYDEALAVFEEMR-VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL-PLT 176
G ++EA + +M+ V +P+ T+VS+ C L +GR +H Y + E+
Sbjct: 369 ANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRA 428
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
L + S++DMY KCG +A +F++ + D+ WNSMI F+ +G ++ +LF E+
Sbjct: 429 LEVINSVIDMYGKCGLTTQAELLFKTTTHR--DLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 127/308 (41%), Gaps = 61/308 (19%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRF-VSNSLIHMYSSFRDIPNARK 66
PD T + L G A+HGY + +S V NS+I MY A
Sbjct: 391 PDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAEL 450
Query: 67 VFDGIPVKNLVSWNSMLDGYA--------------------------------------- 87
+F ++LVSWNSM+ ++
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Query: 88 --------------KCGDISMARQVFDLMPE-QDVLSWSCLIDGYVRKGDYDEALAVFEE 132
K GD++ A + M E +D+ SW+ +I G G + E+L F+
Sbjct: 511 DSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQA 570
Query: 133 MRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
M G + + +T++ + A +LG + +GR H I + L L+ +L+ MY +C
Sbjct: 571 MSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCK 630
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
I+ A+ VF GL+ ++ WN +I + + +E LF + + +P+EIT++ L
Sbjct: 631 DIESAVKVF--GLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKL---EPNEITFVGL 685
Query: 252 LSACAHGG 259
LSA G
Sbjct: 686 LSASTQLG 693
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++++ YAK ++S A VF M +D++SW+ ++ + G ++L F+ M SG +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDN--ELPLTLVLRTSLVDMYAKCGAIQEAL 197
+ VT V+ AC+ + L G +H VI + + + S++ MY+KCG + A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSACA 256
VF + + DV N+++ GFA +G+ +E+ + ++M V ++PD T +++ S C
Sbjct: 347 TVFEELVCR--DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG 404
Query: 257 HGGLVKEA 264
+E
Sbjct: 405 DLSFSREG 412
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 119/247 (48%), Gaps = 44/247 (17%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ +TF L AS L G+ H ++ + G++++ FVS +L+ MYSS + KV
Sbjct: 677 PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKV 736
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F V ++ +WNS++ + F M E+ A+
Sbjct: 737 FRNSGVNSISAWNSVISAHG-----------FHGMGEK--------------------AM 765
Query: 128 AVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL--RTSLV 184
+F+E+ + +PN+ + +S+L AC+H G +D+G + ++ ++ + + V R +V
Sbjct: 766 ELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEG-LSYYKQMEEKFGVKPVTEHRVWIV 824
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG---LVKESLDLFSEMHIVGV 241
DM + G ++EA + F +G+ +P +W +++ HG L KE ++ EM
Sbjct: 825 DMLGRAGKLREA-YEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEM----- 878
Query: 242 KPDEITY 248
+PD +Y
Sbjct: 879 EPDNASY 885
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 122/256 (47%), Gaps = 10/256 (3%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
+++L + + +L Y + G++ + +FD + E+DV+ W+ +I + G Y A+ +F E
Sbjct: 119 LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIE 178
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M G + + T++ A + L K M+H I+ L L +L+++YAK
Sbjct: 179 MIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGEN 238
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ A VF M+ D+ WN+++ +G ++SL F M G + D +T+ ++
Sbjct: 239 LSSAECVFTH--MEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA---CMVDVMARAGQVAEA----YQFLCQ 305
SAC+ + + K+G +P++ H + ++ + ++ G A + +C+
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEA-HVSVGNSIISMYSKCGDTEAAETVFEELVCR 355
Query: 306 IPIQPTASMLGALLNG 321
I A + G NG
Sbjct: 356 DVISSNAILNGFAANG 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 23/191 (12%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM--RVSG 137
NS++D Y KCG + A +F +D++SW+ +I + + G +A +F+E+ S
Sbjct: 433 NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSC 492
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
K + T++++L +C +L G+ +H ++ K G + A
Sbjct: 493 SKFSLSTVLAILTSCDSSDSLIFGKSVHCWL-------------------QKLGDLTSAF 533
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSACA 256
+ + + D+ WNS+I G A G ESL F M G ++ D IT L +SA
Sbjct: 534 LRLET-MSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASG 592
Query: 257 HGGLVKEAWYF 267
+ GLV + F
Sbjct: 593 NLGLVLQGRCF 603
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 194/376 (51%), Gaps = 38/376 (10%)
Query: 13 FPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP 72
F F + SAC + E G IH + K Y+ D IP
Sbjct: 246 FTFSSLLSACRI--EQGKQIHAILFKVSYQFD--------------------------IP 277
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
V ++L+ YAK +S AR+ F+ M ++V+SW+ +I G+ + G+ EA+ +F +
Sbjct: 278 VAT-----ALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQ 332
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M + +P+E+T SVL +CA A+ + + + V L + SL+ Y++ G
Sbjct: 333 MLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGN 392
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ EAL F S ++ D+ W S+IG A HG +ESL +F M + ++PD+IT+L +L
Sbjct: 393 LSEALLCFHS--IREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVL 449
Query: 253 SACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
SAC+HGGLV+E F + + + + EHY C++D++ RAG + EA L +P +P+
Sbjct: 450 SACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPS 509
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREA 371
L A GC H K + + +KL+E+EP + Y LSN Y W++A +R+
Sbjct: 510 THALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKR 569
Query: 372 MERMGVK-KSPGYSFV 386
R K+PG S++
Sbjct: 570 ERRNCYNPKTPGCSWL 585
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 131/326 (40%), Gaps = 68/326 (20%)
Query: 33 HGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDI 92
HG++ K G + F+ N L+ Y+ R+ +A K+FD +P++N+V+WN ++ G +
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQ---- 114
Query: 93 SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE----ALAVFEEMRVSGPKPNEVTMVSV 148
R GD + + + + V+ + +
Sbjct: 115 --------------------------RDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGL 148
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ C + G +H ++ L + TSLV Y KCG I EA VF + L +
Sbjct: 149 IRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDR-- 206
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEM--HIVGVKPDEITYLNLLSAC-------AHGG 259
D+ +WN+++ + +G++ E+ L M + D T+ +LLSAC H
Sbjct: 207 DLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAI 266
Query: 260 LVKEAWYFFDCLGKN--GMTPKSEH------------------YACMVDVMARAGQVAEA 299
L K ++ F + M KS H + M+ A+ G+ EA
Sbjct: 267 LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREA 326
Query: 300 YQFLCQI---PIQPTASMLGALLNGC 322
+ Q+ +QP ++L+ C
Sbjct: 327 MRLFGQMLLENLQPDELTFASVLSSC 352
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 178/307 (57%), Gaps = 4/307 (1%)
Query: 81 SMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
++++ Y++C I+ A VF+ + E D+++ S LI GY R G++ EAL +F E+R+SG KP
Sbjct: 247 ALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKP 306
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
+ V + VL +CA L G+ +H YVI L L + + ++L+DMY+KCG ++ A+ +F
Sbjct: 307 DCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLF 366
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
+ ++ +NS+I G HG + + F+E+ +G+ PDEIT+ LL C H GL
Sbjct: 367 AG--IPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGL 424
Query: 261 VKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
+ + F+ + G+ P++EHY MV +M AG++ EA++F+ + + +LGALL
Sbjct: 425 LNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALL 484
Query: 320 NGCMNHGKLDLAETVGRKLIELEPHQDGRY-VGLSNVYAIFRRWDKARSMREAMERMGVK 378
+ C H LAE V + + + Y V LSNVYA + RWD+ +R+ +
Sbjct: 485 SCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGG 544
Query: 379 KSPGYSF 385
K PG S+
Sbjct: 545 KLPGISW 551
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 152/342 (44%), Gaps = 12/342 (3%)
Query: 6 VFPDHLTFPF--LAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
VFP+ F + + +A A + L++ I ++ D F L +S D
Sbjct: 65 VFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKG 124
Query: 64 ARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
R + V L + ++++ Y+K G I A ++F +P+ D+ W+ +I GY
Sbjct: 125 LRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGC 184
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G +D+ + +F M+ G +PN TMV++ L +H + + L +
Sbjct: 185 CGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYV 244
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+LV+MY++C I A VF S + D+ +S+I G++ G KE+L LF+E+ +
Sbjct: 245 GCALVNMYSRCMCIASACSVFNS--ISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS 302
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
G KPD + +L +CA + + G+ + + ++D+ ++ G + A
Sbjct: 303 GKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCA 362
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIEL 341
IP + S +L+ G HG A T K E+
Sbjct: 363 MSLFAGIPEKNIVS-FNSLILGLGLHG---FASTAFEKFTEI 400
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 123/302 (40%), Gaps = 47/302 (15%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
+H ++TK+ D + + L Y+ D+ +ARK+FD P +++ WNS++ YAK
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQ 86
Query: 92 ISMARQVFDLMPEQDV----LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+ +F + D +++CL G+ D
Sbjct: 87 FTTVLSLFSQILRSDTRPDNFTYACLARGFSESFD------------------------- 121
Query: 148 VLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
KG R +H I + L + +++V Y+K G I EA +F S +
Sbjct: 122 -----------TKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCS--IP 168
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
D+ +WN MI G+ C G + ++LF+ M G +P+ T + L S L+ AW
Sbjct: 169 DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWS 228
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG---CM 323
K + S +V++ +R +A A I +P +L+ G C
Sbjct: 229 VHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACSSLITGYSRCG 287
Query: 324 NH 325
NH
Sbjct: 288 NH 289
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 41/224 (18%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD + + + A L G +H Y+ + G E D V ++LI MYS + A
Sbjct: 303 GKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCA 362
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+F GIP KN+VS+NS++ G G S A + F + E ++
Sbjct: 363 MSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLI---------------- 406
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPLTLVL 179
P+E+T ++LC C H G L+KG RM + I+ + +
Sbjct: 407 ---------------PDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVY- 450
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+V + G ++EA F L KP D I +++ H
Sbjct: 451 ---MVKLMGMAGKLEEAFE-FVMSLQKPIDSGILGALLSCCEVH 490
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 182/360 (50%), Gaps = 35/360 (9%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
LGL +H + +GYE D V + L+ D +A
Sbjct: 360 LGLQVHSLVVVSGYELDYIVGSILV-------------------------------DLHA 388
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
G+I A ++F +P +D++++S LI G V+ G A +F E+ G ++ + +
Sbjct: 389 NVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSN 448
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L C+ L +L G+ +H I V T+LVDMY KCG I + +F M
Sbjct: 449 ILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDG--MLE 506
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
DV W +I GF +G V+E+ F +M +G++P+++T+L LLSAC H GL++EA
Sbjct: 507 RDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARST 566
Query: 268 FDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ + G+ P EHY C+VD++ +AG EA + + ++P++P ++ +LL C H
Sbjct: 567 LETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHK 626
Query: 327 KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
L + KL++ P Y LSN YA WD+ +REA +++G K+S G S++
Sbjct: 627 NAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKES-GMSWI 685
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 160/339 (47%), Gaps = 3/339 (0%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
+ + + KA + +LG+ ++ I K D + NS++ MY + A F
Sbjct: 106 NEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSF 165
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
I + SWN+++ GY K G + A +F MP+ +V+SW+CLI G+V KG AL
Sbjct: 166 KEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALE 224
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
M+ G + + L AC+ G L G+ +H V+ + L + ++L+DMY+
Sbjct: 225 FLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYS 284
Query: 189 KCGAIQEALHVF-RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
CG++ A VF + L S V +WNSM+ GF + + +L L +++ + D T
Sbjct: 285 NCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYT 344
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
L C + ++ + +G + +VD+ A G + +A++ ++P
Sbjct: 345 LSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP 404
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
+ + G L+ GC+ G LA + R+LI+L D
Sbjct: 405 NKDIIAFSG-LIRGCVKSGFNSLAFYLFRELIKLGLDAD 442
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 72/329 (21%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G +I ++ K G + F++N++I MY FR + +A KVFD + +N+V+W +M+ GY
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G + A I+ Y R D +E A NE +V
Sbjct: 84 DGKPNKA------------------IELYRRMLDSEEEAA------------NEFMYSAV 113
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L AC +G + G +++ + L +VL S+VDMY K G + EA F+ +++PS
Sbjct: 114 LKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKE-ILRPS 172
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS--------------- 253
WN++I G+ GL+ E++ LF M +P+ +++ L+S
Sbjct: 173 STS-WNTLISGYCKAGLMDEAVTLFHRMP----QPNVVSWNCLISGFVDKGSPRALEFLV 227
Query: 254 -------------------ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
AC+ GGL+ C+ K+G+ + ++D+ + G
Sbjct: 228 RMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCG 287
Query: 295 QVAEAYQFLCQ--IPIQPTASMLGALLNG 321
+ A Q + + + ++ ++L+G
Sbjct: 288 SLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 42/265 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
++++G+ D + K + L G IHG K GYES+ + +L+ MY +
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I N +FDG+ +++VSW ++ G+ + G +
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRV---------------------------- 525
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+EA F +M G +PN+VT + +L AC H G L++ R + +E L L
Sbjct: 526 ---EEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLE-TMKSEYGLEPYLE 581
Query: 181 --TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH---GLVKESLDLFSE 235
+VD+ + G QEA + ++P D IW S++ H GLV + +E
Sbjct: 582 HYYCVVDLLGQAGLFQEANELINKMPLEP-DKTIWTSLLTACGTHKNAGLVT----VIAE 636
Query: 236 MHIVGVKPDEITYLNLLSACAHGGL 260
+ G D Y +L +A A G+
Sbjct: 637 KLLKGFPDDPSVYTSLSNAYATLGM 661
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 185/381 (48%), Gaps = 34/381 (8%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T + + A L E G IHG + + + + + LI +YS + + +
Sbjct: 380 PDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECI 439
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD D + E D+ W+ +I G+ +AL
Sbjct: 440 FD------------------------------DCINELDIACWNSMISGFRHNMLDTKAL 469
Query: 128 AVFEEMRVSGPK-PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
+F M + PNE + +VL +C+ L +L GR H V+ + + T+L DM
Sbjct: 470 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 529
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
Y KCG I A F + L K + IWN MI G+ +G E++ L+ +M G KPD I
Sbjct: 530 YCKCGEIDSARQFFDAVLRK--NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGI 587
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
T++++L+AC+H GLV+ + + +G+ P+ +HY C+VD + RAG++ +A +
Sbjct: 588 TFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEA 647
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKA 365
P + ++ + LL+ C HG + LA V KL+ L+P YV LSN Y+ R+WD +
Sbjct: 648 TPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDS 707
Query: 366 RSMREAMERMGVKKSPGYSFV 386
+++ M + V K+PG S+
Sbjct: 708 AALQGLMNKNRVHKTPGQSWT 728
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 170/357 (47%), Gaps = 38/357 (10%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
ELG IH + G+ D ++NSL+ +Y+ +D+ A +F +P N+VSWN M+ G+
Sbjct: 232 ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGF 291
Query: 87 A-----------------------------------KCGDISMARQVFDLMPEQDVLSWS 111
+ GD+ R++F +P+ V +W+
Sbjct: 292 GQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWN 351
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
++ GY Y+EA++ F +M+ KP++ T+ +L +CA L L+ G+ +H VI
Sbjct: 352 AMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRT 411
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
E+ + + L+ +Y++C ++ + +F + D+ WNSMI GF + L ++L
Sbjct: 412 EISKNSHIVSGLIAVYSECEKMEISECIF-DDCINELDIACWNSMISGFRHNMLDTKALI 470
Query: 232 LFSEMHIVGVK-PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
LF MH V P+E ++ +LS+C+ + F + K+G S + D+
Sbjct: 471 LFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMY 530
Query: 291 ARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG 347
+ G++ A QF + ++ + +++G ++G+ D A + RK+I DG
Sbjct: 531 CKCGEIDSARQFFDAV-LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDG 586
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 124/218 (56%), Gaps = 3/218 (1%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF 99
G +SD ++ N L+ +Y D ARKVFD + V+++ SWN+ L K GD+ A +VF
Sbjct: 2 GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVF 61
Query: 100 DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD 159
D MPE+DV+SW+ +I VRKG ++AL V++ M G P+ T+ SVL AC+ +
Sbjct: 62 DGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGV 121
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE-ALHVFRSGLMKPSDVFIWNSMIG 218
G H + L + + +L+ MYAKCG I + + VF S L +P++V + ++IG
Sbjct: 122 FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES-LSQPNEVS-YTAVIG 179
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
G A V E++ +F M GV+ D + N+LS A
Sbjct: 180 GLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 217
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 150/361 (41%), Gaps = 39/361 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN- 63
G P T + A + +L G+ HG K G + + FV N+L+ MY+ I +
Sbjct: 99 GFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDY 158
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
+VF+ + N VS+ +++ G A+ + A Q+F LM E KG
Sbjct: 159 GVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCE---------------KGVQ 203
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL---DKGRMMHHYVIDNELPLTLVLR 180
+++ + + +S P+ C L + + G+ +H + L L
Sbjct: 204 VDSVCLSNILSISAPRE----------GCDSLSEIYGNELGKQIHCLALRLGFGGDLHLN 253
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL+++YAK + A +F M +V WN MI GF +S++ + M G
Sbjct: 254 NSLLEIYAKNKDMNGAELIFAE--MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSG 311
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+P+E+T +++L AC G V+ F + + P + M+ + EA
Sbjct: 312 FQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ----PSVSAWNAMLSGYSNYEHYEEAI 367
Query: 301 QFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYV-GLSNVY 356
Q+ Q P + L +L+ C L+ + + +I E ++ V GL VY
Sbjct: 368 SNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVY 427
Query: 357 A 357
+
Sbjct: 428 S 428
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 172/316 (54%), Gaps = 5/316 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
NS++ Y++C D+ A VF + + +W+ +I G+ +E + +EM +SG
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRTSLVDMYAKCGAIQEALH 198
PN +T+ S+L A +G L G+ H Y++ + L+L SLVDMYAK G I A
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF S M+ D + S+I G+ G + +L F +M G+KPD +T + +LSAC+H
Sbjct: 481 VFDS--MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 259 GLVKEA-WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
LV+E W F G+ + EHY+CMVD+ RAG + +A IP +P+++M
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 318 LLNGCMNHGKLDLAETVGRK-LIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMG 376
LL C+ HG ++ E K L+E +P G Y+ L+++YA+ W K +++ + +G
Sbjct: 599 LLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLG 658
Query: 377 VKKSPGYSFVEMHGAL 392
V+K+ ++ +E L
Sbjct: 659 VQKAHEFALMETDSEL 674
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 158/314 (50%), Gaps = 25/314 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ D T+P + KA A LL G +HG I + + + +V N+LI MY F
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLM----PEQDVLSWSCLIDG 116
+ AR++FD + ++ VSWN++++ Y + A ++ D M E +++W+ + G
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV-------- 168
+ G+Y AL MR + V M++ L AC+H+GAL G++ H V
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 169 -IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
IDN +R SL+ MY++C ++ A VF+ ++ + + WNS+I GFA + +
Sbjct: 355 DIDN-------VRNSLITMYSRCSDLRHAFIVFQQ--VEANSLSTWNSIISGFAYNERSE 405
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC--LGKNGMTPKSEHYAC 285
E+ L EM + G P+ IT ++L A G ++ F C L + +
Sbjct: 406 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG-KEFHCYILRRQSYKDCLILWNS 464
Query: 286 MVDVMARAGQVAEA 299
+VD+ A++G++ A
Sbjct: 465 LVDMYAKSGEIIAA 478
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 9/138 (6%)
Query: 76 LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
L+ WNS++D YAK G+I A++VFD M ++D ++++ LIDGY R G + ALA F++M
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
SG KP+ VTMV+VL AC+H + +G +M H + I L L + +VD+Y +
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR----LRLEHYSCMVDLYCRA 574
Query: 191 GAIQEALHVFRSGLMKPS 208
G + +A +F + +PS
Sbjct: 575 GYLDKARDIFHTIPYEPS 592
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 8/192 (4%)
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD + V LV++ S + + I+ ++ +P W+ LI Y+R + E++
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP------WNVLIGSYIRNKRFQESV 169
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+V++ M G + +E T SV+ ACA L GR++H + + L + +L+ MY
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+ G + A +F M D WN++I + + E+ L M++ GV+ +T
Sbjct: 230 KRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 248 YLNLLSACAHGG 259
+ + C G
Sbjct: 288 WNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 172/316 (54%), Gaps = 5/316 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
NS++ Y++C D+ A VF + + +W+ +I G+ +E + +EM +SG
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRTSLVDMYAKCGAIQEALH 198
PN +T+ S+L A +G L G+ H Y++ + L+L SLVDMYAK G I A
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF S M+ D + S+I G+ G + +L F +M G+KPD +T + +LSAC+H
Sbjct: 481 VFDS--MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 259 GLVKEA-WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
LV+E W F G+ + EHY+CMVD+ RAG + +A IP +P+++M
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 318 LLNGCMNHGKLDLAETVGRK-LIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMG 376
LL C+ HG ++ E K L+E +P G Y+ L+++YA+ W K +++ + +G
Sbjct: 599 LLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLG 658
Query: 377 VKKSPGYSFVEMHGAL 392
V+K+ ++ +E L
Sbjct: 659 VQKAHEFALMETDSEL 674
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 158/314 (50%), Gaps = 25/314 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ D T+P + KA A LL G +HG I + + + +V N+LI MY F
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLM----PEQDVLSWSCLIDG 116
+ AR++FD + ++ VSWN++++ Y + A ++ D M E +++W+ + G
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV-------- 168
+ G+Y AL MR + V M++ L AC+H+GAL G++ H V
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 169 -IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
IDN +R SL+ MY++C ++ A VF+ ++ + + WNS+I GFA + +
Sbjct: 355 DIDN-------VRNSLITMYSRCSDLRHAFIVFQQ--VEANSLSTWNSIISGFAYNERSE 405
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC--LGKNGMTPKSEHYAC 285
E+ L EM + G P+ IT ++L A G ++ F C L + +
Sbjct: 406 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG-KEFHCYILRRQSYKDCLILWNS 464
Query: 286 MVDVMARAGQVAEA 299
+VD+ A++G++ A
Sbjct: 465 LVDMYAKSGEIIAA 478
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 9/138 (6%)
Query: 76 LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
L+ WNS++D YAK G+I A++VFD M ++D ++++ LIDGY R G + ALA F++M
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
SG KP+ VTMV+VL AC+H + +G +M H + I L L + +VD+Y +
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR----LRLEHYSCMVDLYCRA 574
Query: 191 GAIQEALHVFRSGLMKPS 208
G + +A +F + +PS
Sbjct: 575 GYLDKARDIFHTIPYEPS 592
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 8/192 (4%)
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD + V LV++ S + + I+ ++ +P W+ LI Y+R + E++
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP------WNVLIGSYIRNKRFQESV 169
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+V++ M G + +E T SV+ ACA L GR++H + + L + +L+ MY
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+ G + A +F M D WN++I + + E+ L M++ GV+ +T
Sbjct: 230 KRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 248 YLNLLSACAHGG 259
+ + C G
Sbjct: 288 WNTIAGGCLEAG 299
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 212/464 (45%), Gaps = 84/464 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + P LTF + + +C +G +HG K GYE VSN+ + MYSSF D
Sbjct: 282 MLEASLRPTDLTFVSVMGSCSC---AAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFED 338
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGY--AKCGDISMA----RQVFDLMPEQ--------- 105
A KVF+ + K+LV+WN+M+ Y AK G +M+ + + P++
Sbjct: 339 FGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLAT 398
Query: 106 ----DVLSW-----------------SCLIDGYVRKGDYDEALAVFE------------- 131
DVL + LI Y + G ++A +FE
Sbjct: 399 SLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAI 458
Query: 132 -----------------------EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
E+R+ P+ T+ ++L C +L G H YV
Sbjct: 459 ISGFYHNGFPFEGLERFSCLLESEVRI---LPDAYTLSTLLSICVSTSSLMLGSQTHAYV 515
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ + ++ +L++MY++CG IQ +L VF M DV WNS+I ++ HG +
Sbjct: 516 LRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQ--MSEKDVVSWNSLISAYSRHGEGEN 573
Query: 229 SLDLFSEMHIVG-VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACM 286
+++ + M G V PD T+ +LSAC+H GLV+E F+ + + +G+ +H++C+
Sbjct: 574 AVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCL 633
Query: 287 VDVMARAGQVAEAYQF--LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPH 344
VD++ RAG + EA + + I + AL + C HG L L + V + L+E E
Sbjct: 634 VDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKD 693
Query: 345 QDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEM 388
YV LSN+YA W +A R A+ +G K G S++ +
Sbjct: 694 DPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 136/280 (48%), Gaps = 13/280 (4%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD + + L G +H Y ++G VSN+L+ +Y ++ + +K
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-DVLSWSCLIDGYVRKGDYDEA 126
FD I ++ SW ++L K GDI A +VFD MPE+ DV W+ +I G G ++ +
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
+ +F EM G + ++ ++L C + G+LD G+ +H VI + + +L+ M
Sbjct: 175 VELFREMHKLGVRHDKFGFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITM 233
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK-ESLDLFSEMHIVGVKPDE 245
Y C + +A VF + D +N +I G A G + ESL +F +M ++P +
Sbjct: 234 YFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTD 291
Query: 246 ITYLNLLSACA--------HGGLVKEAWYFFDCLGKNGMT 277
+T+++++ +C+ HG +K + + + MT
Sbjct: 292 LTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMT 331
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 185/359 (51%), Gaps = 8/359 (2%)
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R+ DG +V NS++D YA + A V M +D ++++ L+ + G ++
Sbjct: 455 RRHVDG----EMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHE 510
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
AL+V M G + +++++ + A A+LGAL+ G+ +H Y + + + SLV
Sbjct: 511 MALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLV 570
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMY+KCG++++A VF + DV WN ++ G A +G + +L F EM + +PD
Sbjct: 571 DMYSKCGSLEDAKKVFEE--IATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPD 628
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+T+L LLSAC++G L +F + K + P+ EHY +V ++ RAG++ EA +
Sbjct: 629 SVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVV 688
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+ ++P A + LL C G L L E + K + L P Y+ L+++Y + +
Sbjct: 689 ETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPE 748
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSH-PSSEQIYMMLGFIVSQMKH 421
A+ R M + K G S VE+ G +H FV+ D + + IY + I ++K
Sbjct: 749 LAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKR 807
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
++NL N++L Y K I AR++FD M + V +W+ +I + + ++ AL++FEE
Sbjct: 55 LENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEE 114
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M SG PNE T SV+ +CA L + G +H VI V+ +SL D+Y+KCG
Sbjct: 115 MMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ 174
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+EA +F S ++ +D W MI +E+L +SEM GV P+E T++ LL
Sbjct: 175 FKEACELFSS--LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL 232
Query: 253 SACAHGGL 260
A + GL
Sbjct: 233 GASSFLGL 240
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 121/257 (47%), Gaps = 35/257 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ GV P+ TF L AS+ L E G IH I
Sbjct: 216 MVKAGVPPNEFTFVKLLGASS-FLGLEFGKTIHSNI------------------------ 250
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ GIP+ N+V S++D Y++ + A +V + EQDV W+ ++ G+VR
Sbjct: 251 ------IVRGIPL-NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EA+ F EMR G +PN T ++L C+ + +LD G+ +H I + +
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 181 TSLVDMYAKCGAIQ-EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+LVDMY KC A + EA VF G M +V W ++I G HG V++ L EM
Sbjct: 364 NALVDMYMKCSASEVEASRVF--GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR 421
Query: 240 GVKPDEITYLNLLSACA 256
V+P+ +T +L AC+
Sbjct: 422 EVEPNVVTLSGVLRACS 438
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 152/346 (43%), Gaps = 37/346 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G+ P++ T+ + + + + G IH K G+E V N+L+ MY
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMY----- 370
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISM-ARQVFDLMPEQDVLSWSCLIDGYVR 119
KC + A +VF M +V+SW+ LI G V
Sbjct: 371 --------------------------MKCSASEVEASRVFGAMVSPNVVSWTTLILGLVD 404
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G + + EM +PN VT+ VL AC+ L + + +H Y++ + +V+
Sbjct: 405 HGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVV 464
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
SLVD YA + A +V RS MK D + S++ F G + +L + + M+
Sbjct: 465 GNSLVDAYASSRKVDYAWNVIRS--MKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD 522
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
G++ D+++ +SA A+ G ++ + K+G + + +VD+ ++ G + +A
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGR--KLIELEP 343
+ +I S G L++G ++G + A + ++ E EP
Sbjct: 583 KKVFEEIATPDVVSWNG-LVSGLASNGFISSALSAFEEMRMKETEP 627
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 40/209 (19%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ D L+ P ASA L E G +H Y K+G+ V NSL+ MYS + +A
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+KVF+ I ++VSWN ++ G A G IS
Sbjct: 583 KKVFEEIATPDVVSWNGLVSGLASNGFIS------------------------------- 611
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPLTLVL 179
AL+ FEEMR+ +P+ VT + +L AC++ D G M Y I+ ++ +
Sbjct: 612 SALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYV-- 669
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
LV + + G ++EA V + +KP+
Sbjct: 670 --HLVGILGRAGRLEEATGVVETMHLKPN 696
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 190/395 (48%), Gaps = 37/395 (9%)
Query: 30 LAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKC 89
L +H K+G + V+ +LI +YS ML+ Y C
Sbjct: 287 LQLHSLTVKSGLVTQTEVATALIKVYSE------------------------MLEDYTDC 322
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
+ M ++ +D+++W+ +I + D + A+ +F ++R P+ T SVL
Sbjct: 323 YKLFM-----EMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVL 376
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
ACA L +H VI VL SL+ YAKCG++ + VF M D
Sbjct: 377 KACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDD--MDSRD 434
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V WNSM+ ++ HG V L +F +M I PD T++ LLSAC+H G V+E F
Sbjct: 435 VVSWNSMLKAYSLHGQVDSILPVFQKMDI---NPDSATFIALLSACSHAGRVEEGLRIFR 491
Query: 270 CLGKNGMT-PKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKL 328
+ + T P+ HYAC++D+++RA + AEA + + Q+P+ P A + ALL C HG
Sbjct: 492 SMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNT 551
Query: 329 DLAETVGRKLIEL-EPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
L + KL EL EP Y+ +SN+Y +++A + ME V+K P S+ E
Sbjct: 552 RLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTE 611
Query: 388 MHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
+ +H F + + P E +Y L ++S +K +
Sbjct: 612 IGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEM 646
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 116/212 (54%), Gaps = 22/212 (10%)
Query: 58 FRDIPNARKVFDGIPV------------KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
F+ R + DGI + +N++ N +++ YAKCG+I ARQVFD MPE+
Sbjct: 66 FQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPER 125
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
+V+SW+ LI GYV+ G+ E +F M +S PNE T+ SVL +C + + G+ +H
Sbjct: 126 NVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCRY----EPGKQVH 180
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKC---GAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC 222
+ L ++ + +++ MY +C A EA VF + +K ++ WNSMI F C
Sbjct: 181 GLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEA--IKFKNLVTWNSMIAAFQC 238
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
L K+++ +F MH GV D T LN+ S+
Sbjct: 239 CNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD TF + KA A L+ L+IH + K G+ +D ++NSLIH Y+ + +V
Sbjct: 367 PDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRV 426
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD + +++VSWNSML Y+ G + D L
Sbjct: 427 FDDMDSRDVVSWNSMLKAYSLHGQV-------------------------------DSIL 455
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDM 186
VF++M ++ P+ T +++L AC+H G +++G R+ E L ++DM
Sbjct: 456 PVFQKMDIN---PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDM 512
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
++ EA V + M P D +W +++G HG
Sbjct: 513 LSRAERFAEAEEVIKQMPMDP-DAVVWIALLGSCRKHG 549
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 144/369 (39%), Gaps = 66/369 (17%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
FP+ T + ++C + E G +HG K G +V+N++I MY D A +
Sbjct: 158 FPNEFTLS--SVLTSC--RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYE 213
Query: 67 ---VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
VF+ I KNLV+WNSM+ + C A VF M V G+ R
Sbjct: 214 AWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV--------GFDRATLL 265
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+ ++++ S PNEV+ + +H + + L + T+L
Sbjct: 266 NICSSLYKS---SDLVPNEVSKCCL--------------QLHSLTVKSGLVTQTEVATAL 308
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ +Y++ + + D+ WN +I FA + + ++ LF ++ + P
Sbjct: 309 IKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSP 367
Query: 244 DEITYLNLLSACA-----------HGGLVKEAWYFFDCLGKNGM---------------- 276
D T+ ++L ACA H ++K + D + N +
Sbjct: 368 DWYTFSSVLKACAGLVTARHALSIHAQVIKGG-FLADTVLNNSLIHAYAKCGSLDLCMRV 426
Query: 277 -----TPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+ + M+ + GQV ++ I P ++ ALL+ C + G+++
Sbjct: 427 FDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEG 486
Query: 332 ETVGRKLIE 340
+ R + E
Sbjct: 487 LRIFRSMFE 495
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 196/387 (50%), Gaps = 50/387 (12%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV PD T + + A G ++G I K G++S+ V+++LI+M++ + A
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAA 556
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+FD KCG E+ +SW+ +++GY+ G +
Sbjct: 557 IVLFD------------------KCG------------FEKSTVSWNIMMNGYLLHGQAE 586
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EA+A F +M+V +PN VT V+++ A A L AL G +H +I + SLV
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLV 646
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFI--WNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
DMYAKCG I+ + F ++ S+ +I WN+M+ +A HGL ++ LF M +K
Sbjct: 647 DMYAKCGMIESSEKCF----IEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELK 702
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
PD +++L++LSAC H GLV+E F+ +G ++ + + EHYACMVD++ +AG EA +
Sbjct: 703 PDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVE 762
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
+ ++ ++ + + GALLN H L L+ +L++LEP Y
Sbjct: 763 MMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY------------ 810
Query: 362 WDKARSMREAMERMGVKKSPGYSFVEM 388
+ R + E +KK P S++E+
Sbjct: 811 -SQDRRLGEVNNVSRIKKVPACSWIEV 836
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 33/310 (10%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G+AIH Y + G D V+ SL+ MYS K
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYS-------------------------------K 347
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
CG++ +A Q+F + ++DV+SWS +I Y + G +DEA+++F +M KPN VT+ SV
Sbjct: 348 CGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSV 407
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L CA + A G+ +H Y I ++ L T+++ MYAKCG AL F +K
Sbjct: 408 LQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK-- 465
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
D +N++ G+ G ++ D++ M + GV PD T + +L CA +
Sbjct: 466 DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVY 525
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKL 328
+ K+G + ++++ + +A A + + + ++NG + HG+
Sbjct: 526 GQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQA 585
Query: 329 DLAETVGRKL 338
+ A R++
Sbjct: 586 EEAVATFRQM 595
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 177/403 (43%), Gaps = 73/403 (18%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD +F F KA A + + GL IH I + G ESD ++ +L+ MY RD+ +A
Sbjct: 95 GIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF----------------DLMPEQDVL 108
R+VFD + VK++V+WN+M+ G A+ G S A +F +L+P L
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKL 214
Query: 109 SWS--C-------------------LIDGYVRKGDYDEALAVFEE--------------- 132
S C LID Y D A +VFEE
Sbjct: 215 EKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAA 274
Query: 133 ----------------MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
MR + N+V S L A A++G L KG +H Y + L
Sbjct: 275 YAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGD 334
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ + TSL+ MY+KCG ++ A +F + ++ DV W++MI + G E++ LF +M
Sbjct: 335 VSVATSLMSMYSKCGELEIAEQLFIN--IEDRDVVSWSAMIASYEQAGQHDEAISLFRDM 392
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQ 295
+ +KP+ +T ++L CA G C K + + E ++ + A+ G+
Sbjct: 393 MRIHIKPNAVTLTSVLQGCA-GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGR 451
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+ A + ++PI+ A AL G G + A V + +
Sbjct: 452 FSPALKAFERLPIKD-AVAFNALAQGYTQIGDANKAFDVYKNM 493
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 166/376 (44%), Gaps = 35/376 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R+ + P+ +T + + A + LG +IH Y KA ES+ + ++I MY+
Sbjct: 392 MMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGR 451
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A K F+ +P+K+ V++N++ GY + GD A + FD
Sbjct: 452 FSPALKAFERLPIKDAVAFNALAQGYTQIGD---ANKAFD-------------------- 488
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
V++ M++ G P+ TMV +L CA +G ++ +I + +
Sbjct: 489 --------VYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVA 540
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L++M+ KC A+ A+ +F + S V WN M+ G+ HG +E++ F +M +
Sbjct: 541 HALINMFTKCDALAAAIVLFDKCGFEKSTVS-WNIMMNGYLLHGQAEEAVATFRQMKVEK 599
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+P+ +T++N++ A A ++ L + G ++ +VD+ A+ G + +
Sbjct: 600 FQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSE 659
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ +I + S +L+ HG A ++ + E E D V +V + R
Sbjct: 660 KCFIEISNKYIVS-WNTMLSAYAAHGLASCAVSLFLSMQENELKPDS--VSFLSVLSACR 716
Query: 361 RWDKARSMREAMERMG 376
+ E MG
Sbjct: 717 HAGLVEEGKRIFEEMG 732
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 58 FRDIPNAR---KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLI 114
R+ N R +V + V L N +++ Y+ ++R +FD + + V+ W+ +I
Sbjct: 12 LRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMI 71
Query: 115 DGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
GY R G + EAL F M G P++ + L ACA KG +H + + L
Sbjct: 72 RGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGL 131
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+ + T+LV+MY K + A VF M DV WN+M+ G A +G +L LF
Sbjct: 132 ESDVYIGTALVEMYCKARDLVSARQVFDK--MHVKDVVTWNTMVSGLAQNGCSSAALLLF 189
Query: 234 SEMHIVGVKPDEITYLNLLSA-----------CAHGGLVKEAWYF 267
+M V D ++ NL+ A C HG ++K+ + F
Sbjct: 190 HDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 192/364 (52%), Gaps = 5/364 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ D +F + + L ++G +H + K G S++FVS+ ++ +Y +
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A NL S +SM+ GY+ G + A+++FD + E++++ W+ + GY+
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 121 GDYDEALAVFEEMRVSGPK-PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
D L + + P+ + MVSVL AC+ ++ G+ +H + + + + L
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
T+ VDMY+KCG ++ A +F S + D ++N+MI G A HG +S F +M
Sbjct: 431 VTAFVDMYSKCGNVEYAERIFDSSFER--DTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG 488
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
G KPDEIT++ LLSAC H GLV E YF + ++P++ HY CM+D+ +A ++ +
Sbjct: 489 GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDK 548
Query: 299 AYQFLCQI-PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
A + + I ++ A +LGA LN C + +L + V KL+ +E RY+ ++N YA
Sbjct: 549 AIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYA 608
Query: 358 IFRR 361
R
Sbjct: 609 SSAR 612
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 193/444 (43%), Gaps = 79/444 (17%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
++ D T + K SA L G +HG + K G + +F +SLIHMYS
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 66 KVFDGIPVK--NLVSWNSMLDGYAKCGDISMARQVFDLMPE-QDVLSWSCLIDGYVRKGD 122
+F+G V+ + V+ N+M+ Y + GDI A VF PE D +SW+ LI GY + G
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGY 240
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+EAL + M +G K +E + +VL + L +L G+ +H V+ N + +
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG 300
Query: 183 LVDMYAKCGAIQ--EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF---SEMH 237
+VD+Y KCG ++ E+ H+ L +++ +SMI G++ G + E+ LF SE +
Sbjct: 301 IVDVYCKCGNMKYAESAHL----LYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKN 356
Query: 238 IV-----------------------------GVKPDEITYLNLLSACA-----------H 257
+V PD + +++L AC+ H
Sbjct: 357 LVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIH 416
Query: 258 G-----GLV---KEAWYFFDCLGKNGMTPKSEH------------YACMVDVMARAGQVA 297
G G++ K F D K G +E Y M+ A G A
Sbjct: 417 GHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEA 476
Query: 298 EAYQF---LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE---LEPHQDGRYVG 351
+++Q + + +P ALL+ C + G + E + +IE + P + G Y
Sbjct: 477 KSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISP-ETGHYTC 535
Query: 352 LSNVYAIFRRWDKARSMREAMERM 375
+ ++Y R DKA + E ++++
Sbjct: 536 MIDLYGKAYRLDKAIELMEGIDQV 559
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 131/262 (50%), Gaps = 14/262 (5%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQ 97
K+G SN L+++YS + AR VFD + +N+ SWN+++ Y K ++ AR+
Sbjct: 16 KSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARE 75
Query: 98 VFDL-MPEQDVLSWSCLIDGYVRK-GDYDEALAVFEEMRVSGPKP---NEVTMVSVLCAC 152
+F+ E+D+++++ L+ G+ + G EA+ +F EM ++ T+ +++
Sbjct: 76 LFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLS 135
Query: 153 AHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFI 212
A L + G +H ++ T +SL+ MY+KCG +E ++F ++ D
Sbjct: 136 AKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVA 195
Query: 213 WNSMIGGFACHGLVKESLDLF---SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
N+MI + G + ++L +F E++ D I++ L++ A G +EA
Sbjct: 196 RNAMIAAYCREGDIDKALSVFWRNPELN------DTISWNTLIAGYAQNGYEEEALKMAV 249
Query: 270 CLGKNGMTPKSEHYACMVDVMA 291
+ +NG+ + +++V++
Sbjct: 250 SMEENGLKWDEHSFGAVLNVLS 271
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 176/340 (51%), Gaps = 39/340 (11%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D++T ++ + + ++G HG+I + GY+++ V+N+L
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANAL----------------- 436
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE-QDVLSWSCLIDGYVRKGDYDEAL 127
LD Y KCG + A F M E +D +SW+ L+ G R G ++AL
Sbjct: 437 --------------LDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQAL 482
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+ FE M+V KP++ T+ ++L CA++ AL+ G+ +H ++I + + +V+R ++VDMY
Sbjct: 483 SFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMY 541
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+KC A+ VF+ + D+ +WNS+I G +G KE +LF + GVKPD +T
Sbjct: 542 SKCRCFDYAIEVFKEAATR--DLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVT 599
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
+L +L AC G V+ + +F + K ++P+ EHY CM+++ + G + + +FL +
Sbjct: 600 FLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLM 659
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE---LEP 343
P P ML + + C + L ++L+ L+P
Sbjct: 660 PFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 168/366 (45%), Gaps = 38/366 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + V P + T + A + L E+G IH K +D VS S+ MY
Sbjct: 254 MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDR 313
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +AR+VFD K+L SW S + GYA G AR++FDLMPE++++SW+ ++ GYV
Sbjct: 314 LESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHA 373
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
++DEAL MR + VT+V +L C+ + + G+ H ++ + +++
Sbjct: 374 HEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVA 433
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMY KCG +Q A FR + + D WN+++ G A G +++L F M V
Sbjct: 434 NALLDMYGKCGTLQSANIWFRQ-MSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ-VE 491
Query: 241 VKPDEITYLNLLSACA-----------HGGLVKEAWYFFDCLGKNGMTPKSEHYACM--- 286
KP + T LL+ CA HG L+++ Y D + + M C
Sbjct: 492 AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDG-YKIDVVIRGAMVDMYSKCRCFDYA 550
Query: 287 VDVM---------------------ARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
++V R+ +V E + L ++P +L C+
Sbjct: 551 IEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIRE 610
Query: 326 GKLDLA 331
G ++L
Sbjct: 611 GHVELG 616
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 150/359 (41%), Gaps = 72/359 (20%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
S++D Y KC +S AR+VFD + +SW+ ++ Y+ G DEA+ +F +M +
Sbjct: 201 TSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVR 260
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P T+ SV+ AC+ AL+ G+++H + + V+ TS+ DMY KC ++ A V
Sbjct: 261 PLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRV 320
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS---EMHIVGVKP------------- 243
F + D+ W S + G+A GL +E+ +LF E +IV
Sbjct: 321 FDQ--TRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDE 378
Query: 244 ---------------DEITYLNLLSAC-----------AHGGLVKEAW--------YFFD 269
D +T + +L+ C AHG + + + D
Sbjct: 379 ALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLD 438
Query: 270 CLGKNGMTPKSE-------------HYACMVDVMARAGQVAEAYQFL--CQIPIQPTASM 314
GK G + + ++ +AR G+ +A F Q+ +P+
Sbjct: 439 MYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYT 498
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAME 373
L LL GC N L+L + + LI +DG + + A+ + K R A+E
Sbjct: 499 LATLLAGCANIPALNLGKAIHGFLI-----RDGYKIDVVIRGAMVDMYSKCRCFDYAIE 552
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 6/201 (2%)
Query: 61 IPNARKVFDGI----PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
+ ARKV + P+ + N ++ Y KCG + AR++F+ MPE+D SW+ +I
Sbjct: 77 VVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITA 136
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ G DE +F M G + E + VL +C + L R +H V+
Sbjct: 137 CAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN 196
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ L TS+VD+Y KC + +A VF ++ PSDV WN ++ + G E++ +F +M
Sbjct: 197 VDLETSIVDVYGKCRVMSDARRVFDE-IVNPSDV-SWNVIVRRYLEMGFNDEAVVMFFKM 254
Query: 237 HIVGVKPDEITYLNLLSACAH 257
+ V+P T +++ AC+
Sbjct: 255 LELNVRPLNHTVSSVMLACSR 275
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 198/422 (46%), Gaps = 39/422 (9%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYES-DRFVSNSLIHMYSSFRDI 61
R VFP+ +F A A L LG IH + K G E + V N LI MY +
Sbjct: 149 RSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFM 208
Query: 62 PNARKVFDGIPVKNLVSWNS-------------------------------MLDGYAKCG 90
+A VF + K+ VSWN+ ++D + K G
Sbjct: 209 DDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSG 268
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
D + A QV MP + SW+ ++ GYV EA F +M SG + +E ++ VL
Sbjct: 269 DFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLA 328
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
A A L + G ++H L +V+ ++L+DMY+KCG ++ A +F + M ++
Sbjct: 329 AVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWT--MPRKNL 386
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSACAHGGLVKEAW--YF 267
+WN MI G+A +G E++ LF+++ +KPD T+LNLL+ C+H + E YF
Sbjct: 387 IVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYF 446
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ + + P EH ++ M + G+V +A Q + + ALL C
Sbjct: 447 EMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKD 506
Query: 328 LDLAETVGRKLIEL--EPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSF 385
L A+TV K+IEL + Y+ +SN+YA RW + +R+ M GV K G S+
Sbjct: 507 LKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSW 566
Query: 386 VE 387
++
Sbjct: 567 ID 568
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 135/307 (43%), Gaps = 42/307 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
++ G PD L + S L +HGY+TK G+ S+ +SNSL+ Y +
Sbjct: 46 LINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDS 105
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A KV FD MP+ DV+SW+ L+ GYV+
Sbjct: 106 LEDAHKV-------------------------------FDEMPDPDVISWNSLVSGYVQS 134
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL-TLVL 179
G + E + +F E+ S PNE + + L ACA L G +H ++ L +V+
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
L+DMY KCG + +A+ VF+ M+ D WN+++ + +G ++ L F +M
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQH--MEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP-- 250
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
PD +TY L+ A G A+ + P S + ++ + + EA
Sbjct: 251 --NPDTVTYNELIDAFVKSGDFNNAFQVLSDMP----NPNSSSWNTILTGYVNSEKSGEA 304
Query: 300 YQFLCQI 306
+F ++
Sbjct: 305 TEFFTKM 311
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 5/224 (2%)
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SWS ++ R G A E + G KP+ +V +L + G + R +H YV
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELIN-DGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ L SL+ Y ++++A VF M DV WNS++ G+ G +E
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDE--MPDPDVISWNSLVSGYVQSGRFQE 139
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA-CMV 287
+ LF E+H V P+E ++ L+ACA L L K G+ + C++
Sbjct: 140 GICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLI 199
Query: 288 DVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
D+ + G + +A + + T S A++ C +GKL+L
Sbjct: 200 DMYGKCGFMDDAVLVFQHMEEKDTVSW-NAIVASCSRNGKLELG 242
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 199/456 (43%), Gaps = 83/456 (18%)
Query: 8 PDHLTFPFLAKASACLLKR--ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
PD + F AC L E G +H + K G E+ +LI MYS + + ++
Sbjct: 80 PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSV 139
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD------------------- 106
+VF+ + K+LVSWN++L G+ + G A VF M +
Sbjct: 140 RVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLK 199
Query: 107 -------------------VLSWSCLIDGYVRKGDYDEALAVFEEMRV------------ 135
V+ + +I Y G +EA+ V+ + V
Sbjct: 200 ILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLIS 259
Query: 136 ---------------SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
S +PN + S L C+ L G+ +H + N L
Sbjct: 260 GCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLC 319
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM--HI 238
L+DMY KCG I +A +FR+ + V W SMI +A +G ++L++F EM
Sbjct: 320 NGLMDMYGKCGQIVQARTIFRA--IPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEG 377
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG----KNGMTPKSEHYACMVDVMARAG 294
GV P+ +T+L ++SACAH GLVKE +C G K + P +EHY C +D++++AG
Sbjct: 378 SGVLPNSVTFLVVISACAHAGLVKEGK---ECFGMMKEKYRLVPGTEHYVCFIDILSKAG 434
Query: 295 QVAEAYQFLCQIPIQPTAS----MLGALLNGCMNHGKLDLAETVGRKLI-ELEPHQDGRY 349
+ E ++ + ++ S + A+L+ C + L E V R+L+ E P Y
Sbjct: 435 ETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIY 494
Query: 350 VGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSF 385
V +SN YA +WD +R ++ G+ K+ G+S
Sbjct: 495 VLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 120/231 (51%), Gaps = 3/231 (1%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A +FD +P++D+ S + + ++R G+ ++ LA+F ++ + P + T VL AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
L + GR +H +I + +T+L+DMY+K G + +++ VF S ++ D+ WN
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFES--VEEKDLVSWN 154
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
+++ GF +G KE+L +F+ M+ V+ E T +++ CA ++++ +
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT 214
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
G A M+ + G + EA + + + ML +L++GC+ +
Sbjct: 215 GRDLVVLGTA-MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRN 264
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 168/325 (51%), Gaps = 10/325 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML++G P TF A S C+ + + +H I + GYE + +V +SL+ Y+ +
Sbjct: 407 MLQMGFRPTEYTFS-TALKSCCVTELQ---QLHSVIVRMGYEDNDYVLSSLMRSYAKNQL 462
Query: 61 IPNARKVFD-GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ +A + D ++V N + Y++ G + ++ + + D +SW+ I R
Sbjct: 463 MNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSR 522
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL--TL 177
++E + +F+ M S +P++ T VS+L C+ L L G +H + + T
Sbjct: 523 SDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTF 582
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
V L+DMY KCG+I+ + VF + ++ W ++I HG +E+L+ F E
Sbjct: 583 VCNV-LIDMYGKCGSIRSVMKVFEE--TREKNLITWTALISCLGIHGYGQEALEKFKETL 639
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+G KPD ++++++L+AC HGG+VKE F + G+ P+ +HY C VD++AR G +
Sbjct: 640 SLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLK 699
Query: 298 EAYQFLCQIPIQPTASMLGALLNGC 322
EA + ++P A + L+GC
Sbjct: 700 EAEHLIREMPFPADAPVWRTFLDGC 724
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
NS++ Y KCG+ MA ++F D++SW+ +I + + +AL +F M G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
PN+ T VSVL + + L GR +H +I N +VL +L+D YAKCG ++++
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 200 FRSGLMKPSDVFIWNSMIGGFACH-GLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
F ++ ++ WN+++ G+A G + L LF +M +G +P E T+ L +C
Sbjct: 374 F--DYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFSTALKSCC 427
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 5/174 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++ Y K G++S+A +VFD MPE++ +S++ +I GY + GD D+A VF EMR G
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT-LVLRTSLVDMYAKCGAIQEALH 198
PN+ T VS L +CA L + G +H + L + + T L+ +Y + ++ A
Sbjct: 113 PNQST-VSGLLSCASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
VF M + WN M+ G +KE + F E+ +G E ++L +L
Sbjct: 171 VFED--MPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVL 222
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 51/270 (18%)
Query: 24 LKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKN-----LVS 78
LK + + HG+ G +SL+ + S R I G+ +KN +V
Sbjct: 301 LKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI-------HGMLIKNGCETGIVL 353
Query: 79 WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
N+++D YAKCG++ +R FD + +++++ W+ L+ GY K D L++F +M G
Sbjct: 354 GNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQMLQMGF 412
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVI-----DNELPLTLVLR------------- 180
+P E T + L +C + + + +H ++ DN+ L+ ++R
Sbjct: 413 RPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALL 468
Query: 181 --------TSLVDM------YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
TS+V + Y++ G E++ + S L +P D WN I +
Sbjct: 469 LLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLI-STLEQP-DTVSWNIAIAACSRSDYH 526
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+E ++LF M ++PD+ T++++LS C+
Sbjct: 527 EEVIELFKHMLQSNIRPDKYTFVSILSLCS 556
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 2/214 (0%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y + + MA QVF+ MP + + +W+ ++ +G E + F E+ G E +
Sbjct: 159 YGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSF 218
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+ VL + + LD + +H L + + SL+ Y KCG A +F+
Sbjct: 219 LGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDA-- 276
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
D+ WN++I A ++L LF M G P++ TY+++L + L+
Sbjct: 277 GSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGR 336
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
L KNG ++D A+ G + ++
Sbjct: 337 QIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 193/444 (43%), Gaps = 55/444 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLL--KRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
ML+ GV + F + AC L ++++ IHG+ K G + + +L+ M +
Sbjct: 408 MLQRGV--ELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRC 465
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ +A ++FD W S LD I I GY
Sbjct: 466 ERMADAEEMFD--------QWPSNLDSSKATTSI---------------------IGGYA 496
Query: 119 RKGDYDEALAVFEEMRVSGPK-PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
R G D+A+++F +EV++ +L C LG + G +H Y + +
Sbjct: 497 RNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDI 556
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
L SL+ MYAKC +A+ +F + M+ DV WNS+I + E+L L+S M+
Sbjct: 557 SLGNSLISMYAKCCDSDDAIKIFNT--MREHDVISWNSLISCYILQRNGDEALALWSRMN 614
Query: 238 IVGVKPDEITYL-----------NLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
+KPD IT N LS+C L + Y + P +EHY
Sbjct: 615 EKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIY--------DIEPTTEHYTAF 666
Query: 287 VDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
V V+ G + EA + +P+QP S+L ALL+ C H +A+ V + ++ +P
Sbjct: 667 VRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETP 726
Query: 347 GRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSE 406
Y+ SN+Y+ W ++ +RE M G +K P S++ +H F A D SHP +
Sbjct: 727 SEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEK 786
Query: 407 QIYMMLGFIVSQMKHIVDYENQEY 430
IY L ++ + + N EY
Sbjct: 787 DIYRGLEILIMECLKVGYEPNTEY 810
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 5/252 (1%)
Query: 20 SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSW 79
S+ LL+ G +HG + G + V+N+LI YS F D+ +++ + ++ V++
Sbjct: 298 SSVLLR---GRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTF 354
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
M+ Y G + A ++F + E++ ++++ L+ G+ R G +AL +F +M G +
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+ ++ S + AC + +H + I ++T+L+DM +C + +A +
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF-SEMHIVGVKPDEITYLNLLSACAHG 258
F S+IGG+A +GL +++ LF + + DE++ +L+ C
Sbjct: 475 FDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTL 534
Query: 259 GLVKEAWYFFDC 270
G +E Y C
Sbjct: 535 GF-REMGYQIHC 545
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 141/337 (41%), Gaps = 52/337 (15%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY--SSFRDIPN 63
V P+ TF + A + + LG+ IHG I K+G+ + FVSNSL+ +Y S +
Sbjct: 177 VQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDD 236
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
K+FD IP +++ SWN+ ++ V++G
Sbjct: 237 VLKLFDEIPQRDVASWNT-------------------------------VVSSLVKEGKS 265
Query: 124 DEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+A +F EM RV G + T+ ++L +C L +GR +H I L L + +
Sbjct: 266 HKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNA 325
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+ Y+K +++ ++ +M D + MI + G+V ++++F+ + +
Sbjct: 326 LIGFYSKFWDMKKVESLYE--MMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV----TE 379
Query: 243 PDEITYLNLLSA-CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV--MARAGQVAEA 299
+ ITY L++ C +G +K F D L + G+ VD + +V+E
Sbjct: 380 KNTITYNALMAGFCRNGHGLKALKLFTDMLQR-GVELTDFSLTSAVDACGLVSEKKVSEQ 438
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGR 336
C G N C+ LD+ R
Sbjct: 439 IHGFCI--------KFGTAFNPCIQTALLDMCTRCER 467
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 6/186 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-P 138
N+++ Y K G A VF + V+S++ LI G+ R EAL VF MR +G
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK--CGAIQEA 196
+PNE T V++L AC + G +H ++ + ++ + SL+ +Y K + +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNLLSAC 255
L +F + DV WN+++ G ++ DLF EM+ V G D T LLS+C
Sbjct: 238 LKLFDE--IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 256 AHGGLV 261
++
Sbjct: 296 TDSSVL 301
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 186/399 (46%), Gaps = 36/399 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + + PD T + + L + G K G+ S+ V + I M+S
Sbjct: 226 MREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNR 285
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ++ K+F + + V NSM+ Y SW C
Sbjct: 286 LDDSVKLFRELEKWDSVLCNSMIGSY----------------------SWHCC------- 316
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
++AL +F +P++ T SVL + + LD G +H VI L +
Sbjct: 317 --GEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVA 373
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI-V 239
TSL++MY K G++ A+ VF K D+ WN++I G A + ESL +F+++ +
Sbjct: 374 TSLMEMYFKTGSVDLAMGVFAKTDGK--DLIFWNTVIMGLARNSRAVESLAIFNQLLMNQ 431
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAE 298
+KPD +T + +L AC + G V E F + K +G+ P +EHYAC+++++ R G + E
Sbjct: 432 SLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINE 491
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A +IP +P++ + +L ++ G LAETV + ++E EP Y+ L +Y +
Sbjct: 492 AKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEM 551
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVA 397
RW+ + +R AM +K + G S + + ++ F A
Sbjct: 552 TWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 125/252 (49%), Gaps = 10/252 (3%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P L F L S L +H + +AG+ + N + +Y + NA ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD IP KN ++WN L G K G ++ A +FD MPE+DV+SW+ +I G V G ++ +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 128 AVFEEMRVSGPKPNEVT--MVSVLCACAHLGALDKGRMMHHYVIDNELP-LTLVLRTSLV 184
VF +M+ +P E T +++ L C G +H I + + LV+ S++
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVR-----HGEQIHGNAICSGVSRYNLVVWNSVM 176
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMY + G AL VF + M+ DV WN +I + G + +LD F M + ++PD
Sbjct: 177 DMYRRLGVFDYALSVFLT--MEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
Query: 245 EITYLNLLSACA 256
E T ++S C+
Sbjct: 235 EYTVSMVVSICS 246
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 35/254 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R + P TF LA C+ E IHG
Sbjct: 127 MQRWEIRPTEFTFSILASLVTCVRHGE---QIHG-------------------------- 157
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
NA + G+ NLV WNS++D Y + G A VF M ++DV+SW+CLI
Sbjct: 158 --NA--ICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDS 213
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ + AL F MR +P+E T+ V+ C+ L L KG+ I ++
Sbjct: 214 GNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVL 273
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+ +DM++KC + +++ +FR ++ D + NSMIG ++ H +++L LF
Sbjct: 274 GAGIDMFSKCNRLDDSVKLFRE--LEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQS 331
Query: 241 VKPDEITYLNLLSA 254
V+PD+ T+ ++LS+
Sbjct: 332 VRPDKFTFSSVLSS 345
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 176/383 (45%), Gaps = 47/383 (12%)
Query: 14 PFLAKASACLLKREL--GLAIHGYITKAGYE-SDRFVSNSLIHMYSSFRDIPNARKVFDG 70
PF++ + C ++ G IH Y+ K G++ S V ++LI MY I N+ ++
Sbjct: 317 PFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQS 376
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
+P NL NS++ CG ++F LM ++
Sbjct: 377 LPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDE------------------------- 411
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHL--GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
G +EVT+ +VL A + +L ++H I + + + SL+D Y
Sbjct: 412 ------GTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYT 465
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
K G + + VF + ++F S+I G+A +G+ + + + EM + + PDE+T
Sbjct: 466 KSGQNEVSRKVFDE--LDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTI 523
Query: 249 LNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
L++LS C+H GLV+E FD L K G++P + YACMVD++ RAG V +A + L Q
Sbjct: 524 LSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQAR 583
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRK----LIELEPHQDGRYVGLSNVYAIFRRWD 363
+LL C H ET+GR+ L+ LEP Y+ +S Y ++
Sbjct: 584 GDADCVAWSSLLQSCRIHRN----ETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFE 639
Query: 364 KARSMREAMERMGVKKSPGYSFV 386
+R +RE + + GYS V
Sbjct: 640 ISRQIREIAASRELMREIGYSSV 662
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 129/263 (49%), Gaps = 6/263 (2%)
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
V G + N+ N ++D Y+ CGD+S + + F+ +PE+DV+SW+ ++ G ++
Sbjct: 240 VKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDS 299
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL-TLVLRTSLVD 185
L +F +M+ G +P+ +S L C+ + G+ +H YV+ + +L ++++L+D
Sbjct: 300 LDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALID 359
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY KC I+ + +++S + ++ NS++ G+ K+ +++F M G DE
Sbjct: 360 MYGKCNGIENSALLYQS--LPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDE 417
Query: 246 ITYLNLLSACAHG--GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+T +L A + + C K+G ++D ++GQ + +
Sbjct: 418 VTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVF 477
Query: 304 CQIPIQPTASMLGALLNGCMNHG 326
++ P L +++NG +G
Sbjct: 478 DELD-TPNIFCLTSIINGYARNG 499
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 150/325 (46%), Gaps = 40/325 (12%)
Query: 1 MLRVGVFPDHLTFP-FLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
M+ G+ TFP L+ S L RE G+ +H + G+ + FV ++L+ +Y+ R
Sbjct: 103 MVSCGLRESASTFPSVLSVCSDELFCRE-GIQVHCRVISLGFGCNMFVRSALVGLYACLR 161
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ A K+FD + +NL N +L + + G+ ++++F+
Sbjct: 162 LVDVALKLFDEMLDRNLAVCNLLLRCFCQTGE---SKRLFE------------------- 199
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT-LV 178
V+ M + G N +T ++ C+H + +G+ +H V+ + ++ +
Sbjct: 200 ---------VYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIF 250
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ LVD Y+ CG + ++ F + + DV WNS++ A +G V +SLDLFS+M
Sbjct: 251 VANVLVDYYSACGDLSGSMRSFNA--VPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQF 308
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY-ACMVDVMARAGQVA 297
G +P +++ L+ C+ ++ + K G S H + ++D+ + +
Sbjct: 309 WGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIE 368
Query: 298 EA---YQFLCQIPIQPTASMLGALL 319
+ YQ L + ++ S++ +L+
Sbjct: 369 NSALLYQSLPCLNLECCNSLMTSLM 393
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 4/258 (1%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P + + N +D K G++ A + FD M +DV++++ LI G R G A+ ++
Sbjct: 42 PSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYA 101
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
EM G + + T SVL C+ +G +H VI + +R++LV +YA
Sbjct: 102 EMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLR 161
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ AL +F M ++ + N ++ F G K +++ M + GV + +TY +
Sbjct: 162 LVDVALKLFDE--MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYM 219
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA-CMVDVMARAGQVAEAYQFLCQIPIQP 310
+ C+H LV E + K+G + A +VD + G ++ + + +P +
Sbjct: 220 IRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKD 279
Query: 311 TASMLGALLNGCMNHGKL 328
S ++++ C ++G +
Sbjct: 280 VISW-NSIVSVCADYGSV 296
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 143/273 (52%), Gaps = 7/273 (2%)
Query: 35 YITKAGYESDRFVSNSLIHMYSSFRDIPNARKV----FDGIPVKNLVSWNSMLDGYAKCG 90
++ + G+ D +++ + + R I +++ + + N+ S++ Y+KCG
Sbjct: 408 WMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG 467
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
++FD + +++V +W+ +ID YV D + VF M +S +P+ VTM VL
Sbjct: 468 VPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLT 527
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
C+ L AL G+ +H +++ E + ++ MY KCG ++ A F + +K S
Sbjct: 528 VCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGS-- 585
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
W ++I + C+ L +++++ F +M G P+ T+ +LS C+ G V EA+ FF+
Sbjct: 586 LTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNL 645
Query: 271 LGK-NGMTPKSEHYACMVDVMARAGQVAEAYQF 302
+ + + P EHY+ +++++ R G+V EA +
Sbjct: 646 MLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 148/327 (45%), Gaps = 78/327 (23%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++D Y KCGD++ R+VF +++ +SW+ L+ GY G +D+AL M+ G +P+
Sbjct: 358 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPD 417
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
VT+ +VL CA L A+ +G+ +H Y + N + L TSL+ MY+KCG + + +F
Sbjct: 418 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD 477
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA----- 256
++ +V W +MI + + ++ +++F M + +PD +T +L+ C+
Sbjct: 478 R--LEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKAL 535
Query: 257 ------HGGLVKE------------------------AWYFFDCLG-------------- 272
HG ++K+ A + FD +
Sbjct: 536 KLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAY 595
Query: 273 -----------------KNGMTPKSEHYACMVDVMARAGQVAEAYQF----LCQIPIQPT 311
G TP + + ++ + ++AG V EAY+F L +QP+
Sbjct: 596 GCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPS 655
Query: 312 A---SMLGALLNGCMNHGKLDLAETVG 335
S++ LLN C G+++ A+ +
Sbjct: 656 EEHYSLVIELLNRC---GRVEEAQRLA 679
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 144/331 (43%), Gaps = 56/331 (16%)
Query: 15 FLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP 72
F A AC+ ++ L G +H +I G ES+ F+ L+HMY++
Sbjct: 114 FSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTA--------------- 158
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD--YDEALAVF 130
CG + A++VFD +V SW+ L+ G V G Y + L+ F
Sbjct: 159 ----------------CGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
EMR G N ++ +V + A AL +G H I N L ++ L+TSLVDMY KC
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYL 249
G + A VF + + D+ +W +MI G A + E+L LF M + P+ +
Sbjct: 263 GKVGLARRVFDEIVER--DIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 250 NLLSACAHGGLVKEAWYFFDCLGK--NGMTPKSEHY-------ACMVDVMARAGQVAEAY 300
+L +K LGK + KS++Y + ++D+ + G +A
Sbjct: 321 TILPVLGDVKALK--------LGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGR 372
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+ Q A AL++G +G+ D A
Sbjct: 373 RVFYGSK-QRNAISWTALMSGYAANGRFDQA 402
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 19/244 (7%)
Query: 26 RELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDG 85
RELG+ ++ Y ++S F S + + +F+ + +K S++D
Sbjct: 206 RELGVDLNVYSLSNVFKS--FAGASALRQGLKTHALAIKNGLFNSVFLKT-----SLVDM 258
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK--PNEV 143
Y KCG + +AR+VFD + E+D++ W +I G EAL +F M +S K PN V
Sbjct: 259 YFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM-ISEEKIYPNSV 317
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDN----ELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+ ++L + AL G+ +H +V+ + E P + + L+D+Y KCG + V
Sbjct: 318 ILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF---VHSGLIDLYCKCGDMASGRRV 374
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F K + W +++ G+A +G ++L M G +PD +T +L CA
Sbjct: 375 FYGS--KQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELR 432
Query: 260 LVKE 263
+K+
Sbjct: 433 AIKQ 436
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 42/195 (21%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD +T + + L +LG +HG+I K +ES FVS +I MY D+ +A
Sbjct: 517 PDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFS 576
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD + VK ++W ++++ Y C ++ + +A+
Sbjct: 577 FDAVAVKGSLTWTAIIEAYG-CNEL------------------------------FRDAI 605
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVID-NELPLTLVLRT 181
FE+M G PN T +VL C+ G +D+ M+ Y + +E +LV
Sbjct: 606 NCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLV--- 662
Query: 182 SLVDMYAKCGAIQEA 196
+++ +CG ++EA
Sbjct: 663 --IELLNRCGRVEEA 675
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 144/276 (52%), Gaps = 5/276 (1%)
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
+ V NL+ +S++ YA+CG+++ A + FD+M E+DV+SW+ +I RKG +A+ +F
Sbjct: 213 VGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMF 272
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
M PNE T+ S+L AC+ AL GR +H V+ + + + TSL+DMYAKC
Sbjct: 273 IGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC 332
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G I + VF M + W S+I A G +E++ LF M + + +T ++
Sbjct: 333 GEISDCRKVFDG--MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVS 390
Query: 251 LLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
+L AC G + + KN + + +V + + G+ +A+ L Q+P +
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRD 450
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPH 344
S A+++GC + G A +++I+ +EP+
Sbjct: 451 VVSWT-AMISGCSSLGHESEALDFLKEMIQEGVEPN 485
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 150/325 (46%), Gaps = 37/325 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML P+ T + KA + G +H + K ++D FV SL+ MY+ +
Sbjct: 275 MLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGE 334
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I + RKVFDG+ +N V+W S++ +A R+
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHA-------------------------------RE 363
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EA+++F M+ N +T+VS+L AC +GAL G+ +H +I N + + +
Sbjct: 364 GFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIG 423
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++LV +Y KCG ++A +V + + DV W +MI G + G E+LD EM G
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQ--LPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEG 481
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
V+P+ TY + L ACA+ + KN + ++ + A+ G V+EA+
Sbjct: 482 VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAF 541
Query: 301 QFLCQIP----IQPTASMLGALLNG 321
+ +P + A ++G NG
Sbjct: 542 RVFDSMPEKNLVSWKAMIMGYARNG 566
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 33/255 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R + ++LT + +A + LG +H I K E + ++ ++L+ +Y
Sbjct: 376 MKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLY----- 430
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG+ A V +P +DV+SW+ +I G
Sbjct: 431 --------------------------CKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSL 464
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EAL +EM G +PN T S L ACA+ +L GR +H N + +
Sbjct: 465 GHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG 524
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+ MYAKCG + EA VF S M ++ W +MI G+A +G +E+L L M G
Sbjct: 525 SALIHMYAKCGFVSEAFRVFDS--MPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEG 582
Query: 241 VKPDEITYLNLLSAC 255
+ D+ + +LS C
Sbjct: 583 FEVDDYIFATILSTC 597
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 99/179 (55%), Gaps = 4/179 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++ + GD+ AR+VFD MPE++ ++W+ +IDGY++ G DEA A+FE+ G +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 140 -PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
NE V +L C+ + GR +H ++ + L++ +SLV YA+CG + AL
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALR 239
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
F +M+ DV W ++I + G +++ +F M P+E T ++L AC+
Sbjct: 240 AF--DMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ GV P+ T+ KA A +G +IH K S+ FV ++LIHMY
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMY----- 531
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG +S A +VFD MPE++++SW +I GY R
Sbjct: 532 --------------------------AKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARN 565
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
G EAL + M G + ++ ++L C +
Sbjct: 566 GFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 127/222 (57%), Gaps = 7/222 (3%)
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
Y +A+ + ++ G P+ V + +CA+L +L+ + +H + + ++ L
Sbjct: 221 YKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNM 276
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
++ M+ +C +I +A VF + K D+ W+ M+ ++ +G+ ++L LF EM G+K
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDK--DMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
P+E T+L + ACA G ++EA+ FD + ++G++PK+EHY ++ V+ + G + EA Q
Sbjct: 335 PNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQ 394
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP 343
++ +P +PTA A+ N HG +DL + + +++++P
Sbjct: 395 YIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L G PD F L ++ A L E +H + ++ + D ++N +I M+
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMF----- 281
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+C I+ A++VFD M ++D+ SW ++ Y
Sbjct: 282 --------------------------GECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDN 315
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G D+AL +FEEM G KPNE T ++V ACA +G +++ +H + NE ++
Sbjct: 316 GMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTE 374
Query: 181 TSL--VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L + + KCG + EA R +P+ F W +M HG + L+ + E +
Sbjct: 375 HYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADF-WEAMRNYARLHGDI--DLEDYMEELM 431
Query: 239 VGVKPDE 245
V V P +
Sbjct: 432 VDVDPSK 438
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 34/322 (10%)
Query: 36 ITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGD 91
+ + G + DR NSL+ + S AR +FD + + ++ S+N++LD K G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 92 ISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+ +A ++ MP + +V+S+S +IDG+ + G +DEAL +F EMR G + V+ +
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 148 VLCACAHLG----ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
+L +G ALD R M I ++ V +L+ Y K G E VF
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDV----VTYNALLGGYGKQGKYDEVKKVFTE- 504
Query: 204 LMKPS----DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
MK ++ ++++I G++ GL KE++++F E G++ D + Y L+ A G
Sbjct: 505 -MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
LV A D + K G++P Y ++D R+ + + + + ++S L A
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSA-- 621
Query: 320 NGCMNHGKLDLAETVGRKLIEL 341
L ET G ++I+L
Sbjct: 622 ----------LTETEGNRVIQL 633
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 161/358 (44%), Gaps = 38/358 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV PD +TF L + E + +T E D F N+L+
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSC 112
+ A ++ +PVK N+VS+++++DG+AK G A +F M D +S++
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
L+ Y + G +EAL + EM G K + VT ++L G D+ + + +
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFR----SGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ L+ ++L+D Y+K G +EA+ +FR +GL +DV +++++I +GLV
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR--ADVVLYSALIDALCKNGLVGS 567
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSAC------------AHGGLVKEAWYFFDCLGKN-- 274
++ L EM G+ P+ +TY +++ A ++GG + + L +
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEG 627
Query: 275 --------GMTPKSEHYACM--VDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC 322
+T +S + + M + E ++ + Q+ I+P A+LN C
Sbjct: 628 NRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNAC 685
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 181 TSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGL-VKESLDLFSE 235
++L+ Y + G +EA+ VF S GL +P ++ +N++I G+ K+ F E
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGL-RP-NLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
M GV+PD IT+ +LL+ C+ GGL + A FD + + Y ++D + + GQ
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 296 VAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVG 351
+ A++ L Q+P++ P +++G G+ D A + ++ L D Y
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 352 LSNVYAIFRRWDKARSMREAMERMGVKK 379
L ++Y R ++A + M +G+KK
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKK 477
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPE----QDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
++M+ + G +++A+++F+ V ++S LI Y R G ++EA++VF M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHY--VIDNELPLTLVLRTSLVDMYAKCGAI 193
G +PN VT +V+ AC G ++ ++ + + N + + SL+ + ++ G
Sbjct: 297 YGLRPNLVTYNAVIDACGK-GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 194 QEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ A ++F + DVF +N+++ G + + ++ ++M + + P+ ++Y +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL---CQIPI 308
+ A G EA F + G+ Y ++ + + G+ EA L + I
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 309 QPTASMLGALLNGCMNHGKLDLAETV 334
+ ALL G GK D + V
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKV 501
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 192/405 (47%), Gaps = 33/405 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYI--TKAGYESDRFVSNSLIHMYSSF 58
M+++G P +TF L CL+ R +G A I K+GYE + V N+LI
Sbjct: 132 MMKLGYEPSIVTFGSLLHG-FCLVNR-IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKN 189
Query: 59 RDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDIS-MARQVFDLMPEQ---DVLSW 110
++ A ++ + + K L V++N++L G G S AR + D+M DV+++
Sbjct: 190 GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF 249
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA-CAHLGALDKGRMMHHYVI 169
+ LID +V++G+ DEA +++EM S PN VT S++ C H D +
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVK 227
P +V +L+ + K + E + +F+ + +D+F +N++I G+ G ++
Sbjct: 310 KGCFP-NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
+LD+F M V PD IT+ LL G ++ A FD + ++ Y M+
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428
Query: 288 DVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIE---- 340
+ +A +V +A++ C++P++ P A ++ G +G A+ + R++ E
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Query: 341 ---------LEPH-QDGRYVGLSNVYAIFRRWDKARSMREAMERM 375
LE H + + L + ++ W++++S M+R+
Sbjct: 489 CQMNAEDDHLEEHSSSNKEISLGSAQSLREIWERSKSNPFWMQRL 533
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 168/356 (47%), Gaps = 19/356 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+++G P +T L + + +++ + G+ + + N++I+ RD
Sbjct: 669 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 728
Query: 61 IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGD-ISMARQVFDLMPEQ---DVLSWSC 112
+ NA +VF + K + V++N+++ G + G AR + D++ + +V+ ++
Sbjct: 729 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 788
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA-CAHLGALDKGRMMHHYVIDN 171
LID +V++G+ EA +++EM PN T S++ C H G L + M ++
Sbjct: 789 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH-GCLGDAKYMFDLMVSK 847
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVF----RSGLMKPSDVFIWNSMIGGFACHGLVK 227
+V +L+ + K +++ + +F GL+ D F +N++I G+ G +
Sbjct: 848 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV--GDAFTYNTLIHGYCQAGKLN 905
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
+ +F+ M GV PD +TY LL + G +++A + L K+ M Y ++
Sbjct: 906 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 965
Query: 288 DVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+ R ++ EA ++ L + ++P A +++G G A+ + R++ E
Sbjct: 966 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 1021
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 8/218 (3%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALA 128
V N+ ++NS+++G+ G + A+ +FDLM + DV++++ LI G+ + ++ +
Sbjct: 815 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 874
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F EM G + T +++ G L+ + + + ++D + +V L+D
Sbjct: 875 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 934
Query: 189 KCGAIQEALHVFRSGLMKPS---DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
G I++AL V L K D+ +N +I G +KE+ LF + GVKPD
Sbjct: 935 NNGKIEKAL-VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 993
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
I Y+ ++S GL +EA + ++G P Y
Sbjct: 994 IAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 1031
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 50/261 (19%)
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK----GRMMHHYV 168
L G++ +++A A+F EM S P P+ V +L A A+L + + M Y
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK----PS---------------- 208
I ++L T L+ + +C + AL V +MK PS
Sbjct: 102 ISHDL----YSFTILIHCFCRCSRLSFALSVL-GKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 209 ------------------DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
+V ++N++I G +G + +L+L +EM G+ D +TY
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 251 LLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIP 307
LL+ + G +A + K + P + ++DV + G + EA Y+ + Q
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 308 IQPTASMLGALLNGCMNHGKL 328
+ P +++NG HG+L
Sbjct: 277 VDPNNVTYNSIINGLCMHGRL 297
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 98/246 (39%), Gaps = 40/246 (16%)
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+D+A ++F EM S P P+ V VL A + D ++H + + + L T
Sbjct: 589 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 648
Query: 183 LVDMYAKC-----------------------------------GAIQEALHVFRS--GLM 205
L+ + +C QEA+ + S G
Sbjct: 649 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 708
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+V I+N++I G + + +L++F M G++ D +TY L+S ++ G +A
Sbjct: 709 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 768
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGC 322
+ K + P + ++D + G + EA Y+ + + + P +L+NG
Sbjct: 769 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 828
Query: 323 MNHGKL 328
HG L
Sbjct: 829 CIHGCL 834
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 134/314 (42%), Gaps = 46/314 (14%)
Query: 72 PVKNLVSWNSMLDGYAKCGD----ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
P+ ++V + +L AK I + ++ +L D+ S++ LI + R AL
Sbjct: 604 PIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLAL 663
Query: 128 AVFEEMRVSGPKPNEVTMVSVL---C-------ACAHLGALDKGRMMHHYVIDNELPLTL 177
A+ +M G +P+ VT+ S+L C A + + ++D + + VI N + L
Sbjct: 664 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 723
Query: 178 -------------------------VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD--V 210
V +L+ + G +A + R + + D V
Sbjct: 724 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 783
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA-CAHGGLVKEAWYFFD 269
+ ++I F G + E+ +L+ EM V P+ TY +L++ C HG L +A Y FD
Sbjct: 784 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL-GDAKYMFD 842
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHG 326
+ G P Y ++ ++ +V + + C++ Q A L++G G
Sbjct: 843 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 902
Query: 327 KLDLAETVGRKLIE 340
KL++A+ V ++++
Sbjct: 903 KLNVAQKVFNRMVD 916
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 165/356 (46%), Gaps = 18/356 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ P+ + + + A + +L +I + + G E + F + LI + +D
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 61 IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSC---- 112
NA V + + N V +N++++G K G S A+++ + ++ S SC
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 113 -LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
+IDG+V+ GD D A+ + EM +G PN VT S++ +D M H +
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVK 227
EL L L +L+D + K ++ A +F GLM +V ++NS+I GF G +
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM--PNVSVYNSLISGFRNLGKMD 712
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
++DL+ +M G+ D TY ++ G + A + L G+ P + +V
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLV 772
Query: 288 DVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+ +++ GQ +A + L ++ + P + ++ G G L+ A + +++E
Sbjct: 773 NGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLE 828
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 117/266 (43%), Gaps = 17/266 (6%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS-GPKPNEVTMVSVLC 150
+ + R+V E D L +S + + D AL + EMR G ++ T SV+
Sbjct: 259 VKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIV 318
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF----RSGLMK 206
A G +++ + ++ +P++++ TSLV+ Y K + +AL +F GL
Sbjct: 319 AFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL-- 376
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
D +++ M+ F + ++++++ + M V + P + ++ C + A
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALE 436
Query: 267 FFDCLGKNGMTPKSEHYAC--MVDVMARAGQVAEAYQFLC---QIPIQPTASMLGALLNG 321
F+ ++ + + + C + + + G+V A FL Q I+P ++
Sbjct: 437 IFNDSFESWI---AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLA 493
Query: 322 CMNHGKLDLAETVGRKLIE--LEPHQ 345
+DLA ++ +++E LEP+
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLEPNN 519
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 184/388 (47%), Gaps = 30/388 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR---ELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M+ G PD T+ + L KR +L L++ + K E+D + ++I +
Sbjct: 211 MVARGCQPDLFTYGTVVNG---LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 58 FRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLS 109
++++ +A +F + K N+V++NS++ G S A ++ M E+ +V++
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA-CAHLGALDKGRMMHHYV 168
+S LID +V++G EA +++EM P+ T S++ C H LD+ + M +
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAKHMFELM 386
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHG 224
I + +V +L+ + K ++E + +FR GL+ + +N++I G G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV--GNTVTYNTLIQGLFQAG 444
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA 284
+ +F +M GV PD ITY LL G +++A F+ L K+ M P Y
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 285 CMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE- 340
M++ M +AG+V + + C + ++P + +++G G + A+ + R++ E
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 341 -LEPHQDGRYVGLSNVYAIFRRWDKARS 367
P+ G Y L + A R DKA S
Sbjct: 565 GTLPNS-GTYNTL--IRARLRDGDKAAS 589
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 134/266 (50%), Gaps = 12/266 (4%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
++LI + + A K++D + + ++ +++S+++G+ + A+ +F+LM
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 105 QD----VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+D V++++ LI G+ + +E + +F EM G N VT +++ G D
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGLMKPSDVFIWNSMI 217
+ + ++ + +P ++ + L+D K G +++AL VF + M+P D++ +N MI
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP-DIYTYNIMI 507
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
G G V++ DLF + + GVKP+ I Y ++S GL +EA F + ++G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFL 303
P S Y ++ R G A + + +
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELI 593
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 169/375 (45%), Gaps = 25/375 (6%)
Query: 16 LAKASACLLKRELGLAIHG-YITKAGYE-SDRFVSNSLIHMYSSFRDIPNARKVFDGI-- 71
LAK A L K ++ G Y + A Y+ ++ N L+ + + +A +F +
Sbjct: 19 LAKRFAQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDL-----KLDDAVDLFGEMVQ 73
Query: 72 --PVKNLVSWNSMLDGYAKCGD----ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
P+ ++V +N +L AK IS+ ++ +L D+ S++ LI+ + R+
Sbjct: 74 SRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPL 133
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM--HHYVIDNELPLTLVLRTSL 183
ALAV +M G +P+ VT+ S+L H + + + +V++ + P T+ T +
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ-PNTVTFNTLI 192
Query: 184 VDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
++ A EA+ + + + D+F + +++ G G + +L L +M +
Sbjct: 193 HGLFLHNKA-SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 251
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
+ D + Y ++ A + V +A F + G+ P Y ++ + G+ ++A +
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 302 FLCQI---PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD-GRYVGLSNVYA 357
L + I P AL++ + GKL AE + ++I+ D Y L N +
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 358 IFRRWDKARSMREAM 372
+ R D+A+ M E M
Sbjct: 372 MHDRLDEAKHMFELM 386
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 13/277 (4%)
Query: 64 ARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLID 115
R +F+ I + V S++ ++ G K G + ++F M EQ D +++ +ID
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 116 GYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
G+ + G ++A + EEM+ G +P VT SV+ A + LD+ M+ + L
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLF 233
+V+ +SL+D + K G I EA + + K +++ WNS++ + E+L F
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
M + P+++TY L++ +A+ F+ + K GM P + Y M+ +A+A
Sbjct: 716 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 775
Query: 294 GQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGK 327
G +AEA + P ++ A++ G N +
Sbjct: 776 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR 812
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 138/309 (44%), Gaps = 16/309 (5%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIP---VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
N ++ + A KVF+ + NL ++N ++D + G + A ++ D M +
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKA 406
Query: 106 ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
+V + + ++D + DEA A+FEEM P+E+T S++ +G +D
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGG 219
++ ++D++ ++ TSL+ + G ++ +++ + + D+ + N+ +
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC 526
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
G ++ +F E+ PD +Y L+ G E + F + + G
Sbjct: 527 MFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLD----LAE 332
+ Y ++D + G+V +AYQ L ++ +PT G++++G +LD L E
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 333 TVGRKLIEL 341
K IEL
Sbjct: 647 EAKSKRIEL 655
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 131/311 (42%), Gaps = 13/311 (4%)
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEM 133
S+NS+L A+C + Q+ M V + ++ G V+ E V + M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
R +P +++ A + + D + + + T+ L T+L+ +AK G +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 194 QEALHVFRSGLMKPS----DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
AL + MK S D+ ++N I F G V + F E+ G+KPDE+TY
Sbjct: 220 DSALSLLDE--MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
+++ + EA F+ L KN P + Y M+ AG+ EAY L + +
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 310 ---PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
P+ +L GK+D A V ++ + Y L ++ + D A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 367 SMREAMERMGV 377
+R++M++ G+
Sbjct: 398 ELRDSMQKAGL 408
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 153/315 (48%), Gaps = 15/315 (4%)
Query: 31 AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKN-----LVSWNSMLDG 85
++ G + K GYE D N+LI + A + D + V+N +V++NS+++G
Sbjct: 134 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENGCQPDVVTYNSIVNG 192
Query: 86 YAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
+ GD S+A + M E+ DV ++S +ID R G D A+++F+EM G K +
Sbjct: 193 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 252
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
VT S++ G + G ++ ++ E+ ++ L+D++ K G +QEA +++
Sbjct: 253 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 312
Query: 202 SGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
+ + ++ +N+++ G+ + E+ ++ M PD +T+ +L+
Sbjct: 313 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 372
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA---EAYQFLCQIPIQPTASMLG 316
V + F + K G+ + Y+ +V ++G++ E +Q + + P G
Sbjct: 373 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 432
Query: 317 ALLNGCMNHGKLDLA 331
LL+G ++GKL+ A
Sbjct: 433 ILLDGLCDNGKLEKA 447
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 164/355 (46%), Gaps = 17/355 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G PD +T+ + L L + + + ++D F +++I
Sbjct: 174 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 233
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
I A +F + K ++V++NS++ G K G + + M + +V++++
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
L+D +V++G EA +++EM G PN +T +++ L + M ++ N+
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVKE 228
+V TSL+ Y + + + VFR+ GL+ ++ ++ ++ GF G +K
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV--ANAVTYSILVQGFCQSGKIKL 411
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+ +LF EM GV PD +TY LL G +++A F+ L K+ M Y +++
Sbjct: 412 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 471
Query: 289 VMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
M + G+V +A+ C +P ++P +++G G L A + RK+ E
Sbjct: 472 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 526
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 110/240 (45%), Gaps = 16/240 (6%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
N++++N+++DGY +S A + DLM D+++++ LI GY D+ + VF
Sbjct: 322 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 381
Query: 131 EEMRVSGPKPNEVT---MVSVLCACAHLGALDK--GRMMHHYVIDNELPLTLVLRTSLVD 185
+ G N VT +V C + ++ M+ H V+ + + ++L D
Sbjct: 382 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL-----D 436
Query: 186 MYAKCGAIQEALHVFRSGLMKPSD--VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
G +++AL +F D + ++ ++I G G V+++ +LF + GVKP
Sbjct: 437 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 496
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ +TY ++S G + EA + ++G P Y ++ R G + + + +
Sbjct: 497 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 556
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 179/386 (46%), Gaps = 26/386 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR---ELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M+ G PD +T+ + L KR +L L++ + + E + N++I +
Sbjct: 212 MVVKGCQPDLVTYGIVVNG---LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 58 FRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLS 109
++++ +A +F + K N+V++NS++ G S A ++ M E+ +V++
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
+S LID +V++G EA +++EM P+ T S++ LD+ + M +I
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGL 225
+ +V +L+ + K + E + +FR GL+ + + ++I GF
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV--GNTVTYTTLIHGFFQARE 446
Query: 226 VKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC 285
+ +F +M GV PD +TY LL + G V+ A F+ L ++ M P Y
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 286 MVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
M++ M +AG+V + + C + ++P +++G G + A+ + R++ E
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 343 PHQD-GRYVGLSNVYAIFRRWDKARS 367
P D G Y L + A R DKA S
Sbjct: 567 PLPDSGTYNTL--IRAHLRDGDKAAS 590
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 145/295 (49%), Gaps = 16/295 (5%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
++LI + + A K++D + + ++ +++S+++G+ + A+ +F+LM
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 105 QD----VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+D V++++ LI G+ + DE + +F EM G N VT +++ D
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGLMKPSDVFIWNSMI 217
+++ ++ + + ++ + L+D G ++ AL VF + M+P D++ +N MI
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP-DIYTYNIMI 508
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
G G V++ DLF + + GVKP+ +TY ++S GL +EA F + + G
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLD 329
P S Y ++ R G A + + + ++ AS +G L+ ++ G+LD
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLD 622
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 168/384 (43%), Gaps = 49/384 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ FP + F L A A + K +L +++ + G + + + LI+ +
Sbjct: 72 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ 131
Query: 61 IPNARKVFDGIPV----KNLVSWNSMLDGYA---KCGD-ISMARQVFDLMPEQDVLSWSC 112
+ A V + ++V+ NS+L+G+ + D +S+ Q+ ++ + D +++
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI G R EA+A+ + M V G +P+ VT V+ G +D
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID------------- 238
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
L L+L L G ++P V I+N++I + V ++L+L
Sbjct: 239 LALSL-------------------LKKMEQGKIEPG-VVIYNTIIDALCNYKNVNDALNL 278
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
F+EM G++P+ +TY +L+ + G +A + + + P ++ ++D +
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 293 AGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRY 349
G++ EA Y + + I P +L+NG H +LD A + + EL +D +
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA----KHMFELMISKDC-F 393
Query: 350 VGLSNVYAIFRRWDKARSMREAME 373
+ + + + KA+ + E ME
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGME 417
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 115/265 (43%), Gaps = 21/265 (7%)
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD----KGRMMHHYVIDNELPLTLVL 179
D+A+ +F +M S P P+ V +L A A + D G M + I + L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH----NLYT 118
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMK---PSDVFIWNSMIGGFACHG-LVKESLDLFSE 235
+ L++ + + + AL V + +MK D+ NS++ GF CHG + +++ L +
Sbjct: 119 YSILINCFCRRSQLSLALAVL-AKMMKLGYEPDIVTLNSLLNGF-CHGNRISDAVSLVGQ 176
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
M +G +PD T+ L+ EA D + G P Y +V+ + + G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 296 VAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPHQDGRYV 350
+ A L ++ I+P + +++ N+ ++ A + ++ + P+ Y
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV-VTYN 295
Query: 351 GLSNVYAIFRRW-DKARSMREAMER 374
L + RW D +R + + +ER
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIER 320
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 148/295 (50%), Gaps = 16/295 (5%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
NSLI ++ + A K+FD + + N+V++NS+++G+ + A+Q+F LM
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 105 QD----VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+D V++++ LI+G+ + + + +F +M G N VT +++ D
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGLMKPSDVFIWNSMI 217
+M+ ++ + + ++ +L+D K G +++A+ VF + M+P D++ +N M
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP-DIYTYNIMS 492
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
G G V++ DLF + + GVKPD I Y ++S GL +EA+ F + ++G
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLD 329
P S Y ++ R G A + + + ++ AS G L+ ++ G+LD
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLD 606
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 174/383 (45%), Gaps = 20/383 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G PD +T+ + + +L L + + K E+D + +++I +R
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ +A +F + K ++ +++S++ G S A ++ M E+ +V++++
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LID + ++G EA +F+EM PN VT S++ LD+ + + ++ +
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVKE 228
+V +L++ + K + + + +FR GL+ + + ++I GF
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV--GNTVTYTTLIHGFFQASDCDN 433
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+ +F +M GV P+ +TY LL G +++A F+ L K+ M P Y M +
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 289 VMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQ 345
M +AG+V + + C + ++P +++G G + A T+ K+ E P
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 346 D-GRYVGLSNVYAIFRRWDKARS 367
D G Y L + A R DKA S
Sbjct: 554 DSGTYNTL--IRAHLRDGDKAAS 574
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 152/365 (41%), Gaps = 53/365 (14%)
Query: 22 CLLKRE---LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG-------- 70
CL +R LAI G + K GY NSL++ + I A + D
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 71 ---------------------------IPVK----NLVSWNSMLDGYAKCGDISMARQVF 99
+ VK +LV++ ++++G K G+ +A +
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 100 DLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL-CACAH 154
+ M E DV+ +S +ID + D+AL +F EM G +P+ T S++ C C +
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD--VFI 212
D R++ +++ ++ +V SL+D +AK G + EA +F + + D +
Sbjct: 289 GRWSDASRLLSD-MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
+NS+I GF H + E+ +F+ M PD +TY L++ V + F +
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 273 KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLD 329
+ G+ + Y ++ +A A Q+ + P LL+G +GKL+
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 330 LAETV 334
A V
Sbjct: 468 KAMVV 472
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 152/346 (43%), Gaps = 46/346 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ FP + F L A A + K +L ++ + G + + N +I+
Sbjct: 56 MVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQ 115
Query: 61 IPNARKVFDGIPVK-----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWS 111
+ A + G +K ++V+ NS+L+G+ IS A + D M E D ++++
Sbjct: 116 LSFALAIL-GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 174
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
L+ G + EA+A+ E M V G +P+ VT +V+ G D
Sbjct: 175 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD------------ 222
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
L +L++ K G I+ +DV I++++I + V ++L+
Sbjct: 223 -------LALNLLNKMEK-GKIE-------------ADVVIYSTVIDSLCKYRHVDDALN 261
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMA 291
LF+EM G++PD TY +L+S + G +A + + + P + ++D A
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 292 RAGQVAEAYQF---LCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
+ G++ EA + + Q I P +L+NG H +LD A+ +
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 167/346 (48%), Gaps = 27/346 (7%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPE 104
N+L+H Y A +FD + ++ V++N+++DG + G++ A+++ + M
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT 437
Query: 105 Q----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
Q DV++++ L+ G+V+ G+ A V++EM G KP+ + LG DK
Sbjct: 438 QLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 161 GRMMHHYVI--DNELPLTLVLRTSLVDMYAKCGAIQEALH----VFRSGLMKPSDVFIWN 214
+H ++ D+ P L + +D K G + +A+ +FR GL+ D +
Sbjct: 498 AFRLHEEMVATDHHAP-DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLV--PDHVTYT 554
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
++I G+ +G K + +L+ EM + P ITY L+ A G +++A+ + + K
Sbjct: 555 TVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 614
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLA 331
G+ P + ++ M +AG + EAY++LC++ I P L++ + K +
Sbjct: 615 GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEV 674
Query: 332 ETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREA--MERM 375
+ +++++ E DG A+F+ +K RE +ER+
Sbjct: 675 VKLYKEMLDKEIEPDG-----YTHRALFKHLEKDHESREVEFLERL 715
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 187/456 (41%), Gaps = 61/456 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R + +T+ L + K E HG + ++G+ + N LI Y
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGY--AKC--GDISMARQVFDLMPEQDVLSWSCLIDG 116
+A V D + + S + Y A C G I AR++ M DV+S++ L+ G
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHG 383
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
Y++ G + EA +F+++R P+ VT +++ G L+ + + + +
Sbjct: 384 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 443
Query: 177 LVLRTSLVDMYAKCGAIQEALHVF----RSGLMKPS------------------------ 208
++ T+LV + K G + A V+ R G+ KP
Sbjct: 444 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGI-KPDGYAYTTRAVGELRLGDSDKAFRLH 502
Query: 209 -----------DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
D+ I+N I G G + ++++ ++ VG+ PD +TY ++
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 562
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASM 314
G K A +D + + + P Y ++ A+AG++ +A+Q+ ++ ++P
Sbjct: 563 NGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIELE----PHQDGRYVGLSNVYAIFRRWDKARSMRE 370
ALL G G +D A R L ++E P Y L + F +W++ + +
Sbjct: 623 HNALLYGMCKAGNIDEAY---RYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 371 AMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSE 406
M ++ GY+ H AL + + +K H S E
Sbjct: 680 EMLDKEIEPD-GYT----HRALFKHL--EKDHESRE 708
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 145/363 (39%), Gaps = 52/363 (14%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV--------------------------- 107
++++N+MLD K GD+ +++ M +++
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 108 ------------LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
S++ LI+GY ++G +D+A V +EM +G P T +CA
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGLMKPSDVFI 212
G +D R + + + +V +L+ Y K G EA +F R+G + PS +
Sbjct: 357 GRIDDAREL----LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS-IVT 411
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
+N++I G G ++ + L EM + PD ITY L+ G + A +D +
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 273 KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ----PTASMLGALLNGCMNHGKL 328
+ G+ P Y R G +A++ ++ P ++ ++G G L
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 329 DLAETVGRKLIELEPHQDG-RYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
A RK+ + D Y + Y ++ AR++ + M R + S FV
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591
Query: 388 MHG 390
++G
Sbjct: 592 IYG 594
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 118/289 (40%), Gaps = 18/289 (6%)
Query: 92 ISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
++ A V++ M E V++++ ++D + GD + ++ EM+ + +EVT
Sbjct: 219 MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNI 278
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV----FRSG 203
++ + G +++ R H + + +T L++ Y K G +A V +G
Sbjct: 279 LINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG 338
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
+ + + N I G + ++ +L S M PD ++Y L+ G E
Sbjct: 339 IYPTTSTY--NIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVE 392
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLN 320
A FD L + P Y ++D + +G + A + ++ Q P L+
Sbjct: 393 ASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 321 GCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMR 369
G + +G L +A V +++ DG Y + R D ++ R
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDG-YAYTTRAVGELRLGDSDKAFR 500
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 167/360 (46%), Gaps = 34/360 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G PD +T+ +L + + + + I K + + N+LIH + +
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGR 368
Query: 61 IPNARKVFDGIP-----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWS 111
+ +A+ V + V ++ ++NS++ GY K G + +A +V M + +V S++
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEV---TMVSVLCACAHLGALDKGRMMHHYV 168
L+DG+ + G DEA V EM G KPN V ++S C + R+
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK--------EHRIPEAVE 480
Query: 169 IDNELPLT-----LVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFA 221
I E+P + SL+ + I+ AL + R + + ++ +N++I F
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE 281
G +KE+ L +EM G DEITY +L+ G V +A F+ + ++G P +
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 282 HYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKL 338
+++ + R+G V EA +F ++ ++ P +L+NG G+++ T+ RKL
Sbjct: 601 SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKL 660
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 141/297 (47%), Gaps = 10/297 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G P+ ++ L L K + + ++ G + + N LI +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVF-DLMPE---QDVLSWSC 112
IP A ++F +P K ++ ++NS++ G + +I A + D++ E + ++++
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI+ ++R+G+ EA + EM G +E+T S++ G +DK R + ++ +
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS--DVFIWNSMIGGFACHGLVKESL 230
+ + L++ + G ++EA+ + +++ S D+ +NS+I G G +++ L
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
+F ++ G+ PD +T+ L+S GG V +A D ++G P ++ ++
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 167/386 (43%), Gaps = 47/386 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYS---- 56
ML + P TF + KA + + + L++ +TK G + + +LIH S
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 57 ---------------------SFRD----------IPNARKVFDGIPVKNL----VSWNS 81
+F D I A K+ + + ++ +++
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS-GPKP 140
+++G K G + A+ +F +P+ +++ ++ LI G+V G D+A AV +M S G P
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
+ T S++ G + + H + + + T LVD + K G I EA +V
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 201 R---SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+ +KP+ V +N +I F + E++++F EM G KPD T+ +L+S
Sbjct: 448 NEMSADGLKPNTVG-FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA---SM 314
+K A + + G+ + Y +++ R G++ EA + + ++ Q +
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIE 340
+L+ G G++D A ++ K++
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLR 592
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 108/232 (46%), Gaps = 8/232 (3%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
N V +N ++ + K I A ++F MP + DV +++ LI G + AL +
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+M G N VT +++ A G + + R + + ++ PL + SL+ +
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 191 GAIQEALHVFRSGLMK---PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
G + +A +F L PS++ N +I G G+V+E+++ EM + G PD +T
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISC-NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ +L++ G +++ F L G+ P + + ++ + + G V +A
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 148/311 (47%), Gaps = 12/311 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + GV + +T+ L + S K + + + G ESD V SLI +
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 61 IPNARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWSC 112
+ A +FD + K L ++ +++DG K G++ A + + M + V + ++
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LIDGY RKG DEA +++ M G + + T ++ L D+ + +++
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGLMKPSDVFIWNSMIGGFACHGLVKES 229
+ L+ V T+L+D+Y K G ++EA +F S ++P+ + +N MI + G +KE+
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAI-TYNVMIYAYCKQGKIKEA 523
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
L + M G+ PD TY +L+ V EA F +G G+ S Y M+
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583
Query: 290 MARAGQVAEAY 300
+++AG+ EA+
Sbjct: 584 LSKAGKSDEAF 594
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 146/341 (42%), Gaps = 50/341 (14%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVF-----DGIPVKNLVSWNSMLDGYAKCGDISM 94
G + + + N++I+ Y RD V DG+ V N V++ +++ K G +S
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV-VYNKVTYTLLMELSVKNGKMSD 312
Query: 95 ARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
A ++FD M E+ DV ++ LI RKG+ A +F+E+ G P+ T +++
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PS 208
+G + ++ + + + +T V+ +L+D Y + G + EA ++ K +
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 209 DVFIWNS---------------------MIGG--------------FACHGLVKESLDLF 233
DVF N+ M GG + G V+E+ LF
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
EM GV+P+ ITY ++ A G +KEA + NGM P S Y ++ A
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIA 552
Query: 294 GQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLA 331
V EA + ++ ++ + +++G GK D A
Sbjct: 553 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 124/298 (41%), Gaps = 53/298 (17%)
Query: 96 RQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
R++ D + V S + +++G R+G+ +++ + +E V G KP T +++ A
Sbjct: 213 RRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ 272
Query: 156 -------GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
G L M V+ N++ TL++ S+
Sbjct: 273 RDFSGVEGVLKV--MKKDGVVYNKVTYTLLMELSVK------------------------ 306
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
+G + ++ LF EM G++ D Y +L+S G +K A+ F
Sbjct: 307 --------------NGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLF 352
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNH 325
D L + G++P S Y ++D + + G++ A + ++ + T + L++G
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 326 GKLDLAETVGRKLIELEPHQDGRYV--GLSNVYAIFRRWDKARSMREAMERMGVKKSP 381
G +D A + ++E + Q + +++ + +R+D+A+ M GVK S
Sbjct: 413 GMVDEASMI-YDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 158/351 (45%), Gaps = 17/351 (4%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G FPD TF L + + I + + GY+ D + NS+I ++ A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 65 RKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDG 116
+V D + + N V++N+++ K + A ++ ++ + DV +++ LI G
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
++ A+ +FEEMR G +P+E T ++ + G LD+ M + + +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
++ +L+D + K +EA +F G+ + S +N++I G V+++ L
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS--VTYNTLIDGLCKSRRVEDAAQL 527
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
+M + G KPD+ TY +LL+ GG +K+A + NG P Y ++ + +
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 293 AGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
AG+V A + L I I T ++ G K A + R+++E
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 17/313 (5%)
Query: 80 NSMLDGYA-KCGDISMAR-QVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
N ++DG + K +IS A+ V+ + P DV +++ LI R A+ + E+M G
Sbjct: 162 NLLVDGNSLKLVEISHAKMSVWGIKP--DVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
P+E T +V+ G LD + +++ + V +V + K G +++AL
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 198 HVFRSGLMKPS---DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+ + + D + +N+++ G G VK ++++ M G PD TY +++S
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF---LCQIPIQPT 311
G VKEA D + +P + Y ++ + + QV EA + L I P
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 312 ASMLGALLNG-CM--NHG-KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARS 367
+L+ G C+ NH ++L E + K E + + Y L + + D+A +
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD---EFTYNMLIDSLCSKGKLDEALN 456
Query: 368 MREAMERMGVKKS 380
M + ME G +S
Sbjct: 457 MLKQMELSGCARS 469
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 151/315 (47%), Gaps = 17/315 (5%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSF----RDIPNARKVFDGIPVKNLVSWNSMLD 84
A+ + K G + D + N++I + R I +++ ++ ++
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 85 GYAKCGDISMARQVFDLMPE----QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
GYAK GD+ + +VFD+M V +++ LI+G V K ++A+ + +EM ++G
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYV-IDNE-LPLTLVLRTSLVDMYAKCGAIQEALH 198
NE T ++ A +G D G+ ++ + NE L + + +L+ K G +Q AL
Sbjct: 658 NEHTYTKIMQGYASVG--DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 199 VFR--SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
V + S P + F++N +I G+A G V E+ DL +M GVKPD TY + +SAC+
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTAS 313
G + A + + G+ P + Y ++ ARA +A Y+ + + I+P +
Sbjct: 776 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKA 835
Query: 314 MLGALLNGCMNHGKL 328
+ LL ++ +
Sbjct: 836 VYHCLLTSLLSRASI 850
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 156/359 (43%), Gaps = 65/359 (18%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLIDGYVRKGDYDEALAVF 130
+V++ +++ Y K G IS A +V +M E+ V ++S +I+G+V+ D+ A AVF
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKG--------RMMHHYVIDNELPLTLVLRTS 182
E+M G KP+ + +++ A +G +D+ ++ H +P
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP-------- 594
Query: 183 LVDMYAKCGAIQEALHVF----RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
++ YAK G ++ +L VF R G + P+ V +N +I G +++++++ EM +
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCV-PT-VHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM---------------------- 276
GV +E TY ++ A G +A+ +F L G+
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 277 ------------TPKSEH-YACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLN 320
P++ Y ++D AR G V EA + Q+ ++P + ++
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 321 GCMNHGKLDLAETVGRKLIELEPHQDGR-YVGLSNVYAIFRRWDKARSMREAMERMGVK 378
C G ++ A ++ L + + Y L +A +KA S E M+ MG+K
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 43/276 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G P TF L + E + I +T AG ++ ++ Y+S D
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 61 IPNARKVF-----DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWS 111
A + F +G+ V ++ ++ ++L K G + A V M +++ ++
Sbjct: 675 TGKAFEYFTRLQNEGLDV-DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 733
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
LIDG+ R+GD EA + ++M+ G KP+ T S + AC+ G +++
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ-------- 785
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
++ +M EAL V KP ++ + ++I G+A L +++L
Sbjct: 786 ----------TIEEM--------EALGV------KP-NIKTYTTLIKGWARASLPEKALS 820
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
+ EM +G+KPD+ Y LL++ + EA+ +
Sbjct: 821 CYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIY 856
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 126/308 (40%), Gaps = 47/308 (15%)
Query: 47 VSNSLIHMYSSFRDIPNA----RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL- 101
+ SLIH Y+ RD+ A RK+ + +LV+++ ++ G++K G A FD
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 102 ----------------------------------MPEQDVLS----WSCLIDGYVRKGDY 123
M E+ + + + ++DGY D
Sbjct: 406 KRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADE 465
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+ L VF+ ++ G P VT ++ +G + K + + + + L + +
Sbjct: 466 KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 184 VDMYAKCGAIQEALHVFRSGL---MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++ + K A VF + MKP DV ++N++I F G + ++ EM +
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKP-DVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+P T++ ++ A G ++ + FD + + G P + +++ + Q+ +A
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 301 QFLCQIPI 308
+ L ++ +
Sbjct: 645 EILDEMTL 652
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 96/240 (40%), Gaps = 15/240 (6%)
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
+RK I N +W +++ + K S R F LM + Y R+GD
Sbjct: 279 SRKSLQRILDTNGDNWQAVISAFEKISKPS--RTEFGLM-----------VKFYGRRGDM 325
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
A FE MR G P S++ A A +D+ + + + ++LV + +
Sbjct: 326 HRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVI 385
Query: 184 VDMYAKCGAIQEALHVFRSG--LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
V ++K G + A + F + K + I+ +I ++ + L EM G+
Sbjct: 386 VGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGI 445
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
Y ++ K+ F L + G TP Y C++++ + G++++A +
Sbjct: 446 DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALE 505
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 166/385 (43%), Gaps = 52/385 (13%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
+G+ D TF + C + L L+I G + K GYE DR SL++ + + +
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 64 ARKVFDGIP----VKNLVSWNSMLDGYAKCGDIS-------------------------- 93
A + D + ++V++N+++D K ++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 94 ----------MARQVFDLMPEQ---DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
AR + D++ ++ +V+++S L+D +V+ G EA +FEEM P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
+ VT S++ +D+ M ++ +V +L++ + K +++ + +F
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 201 RS----GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
R GL+ S+ +N++I GF G V ++ + FS+M G+ PD TY LL
Sbjct: 354 REMSQRGLV--SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTAS 313
G +++A F+ + K M Y ++ M + G+V EA+ C + ++P
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 314 MLGALLNGCMNHGKLDLAETVGRKL 338
+++G G L E + K+
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
++V+++S+++G I A Q+FDLM + DV+S++ LI+G+ + ++ + +F
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGR----MMHHYVIDNELPLTLVLRTSLVDM 186
EM G N VT +++ G +DK + M + I ++ +L L D
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 187 YAKCGAIQEALHVFRSGLMKPSD--VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
G +++AL +F + D + + ++I G G V+E+ LF + + G+KPD
Sbjct: 414 ----GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
+TY ++S GL+ E + + + G+
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 106/251 (42%), Gaps = 17/251 (6%)
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
++D L+ +++ D+ G E L + +D++ +N +I F C V
Sbjct: 85 IVDFNRLLSAIVKLKKYDVVISLGKKMEVLGI-------RNDLYTFNIVINCFCCCFQVS 137
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
+L + +M +G +PD +T +L++ V +A D + + G P Y ++
Sbjct: 138 LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 197
Query: 288 DVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLI--ELE 342
D + + +V +A+ F +I I+P AL+NG N + A + +I ++
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 343 PHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSH 402
P+ + S + F + K +E E M V+ S V ++ HD+
Sbjct: 258 PN----VITYSALLDAFVKNGKVLEAKELFEEM-VRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 403 PSSEQIYMMLG 413
+++ +M+
Sbjct: 313 EANQMFDLMVS 323
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 162/365 (44%), Gaps = 45/365 (12%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
++G PD +TF L G + G +++A DR V D+
Sbjct: 133 KLGYEPDTITFSTLVN----------GFCLEGRVSEAVALVDRMVE------MKQRPDLV 176
Query: 63 NARKVFDGIPVKNLVS--------------------WNSMLDGYAKCGDISMARQVFDLM 102
+ +G+ +K VS + +L+ K G+ ++A +F M
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 103 PEQD----VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL 158
E++ V+ +S +ID + G +D+AL++F EM + G K + VT S++ + G
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 159 DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSM 216
D G M +I + +V ++L+D++ K G + EA ++ + + D +NS+
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
I GF + E+ +F M G +PD +TY L+++ V + F + G+
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 277 TPKSEHYACMVDVMARAGQV---AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
P + Y +V ++G++ E +Q + + P+ G LL+G ++G+L+ A
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 334 VGRKL 338
+ K+
Sbjct: 477 IFEKM 481
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 125/256 (48%), Gaps = 14/256 (5%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVF 99
D ++LI ++ + A+++++ + + + +++NS++DG+ K + A Q+F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 100 DLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
DLM E D++++S LI+ Y + D+ + +F E+ G PN +T +++
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS----DVF 211
G L+ + + ++ +P ++V L+D G + +AL +F M+ S +
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK--MQKSRMTLGIG 491
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
I+N +I G V ++ LF + GVKPD +TY ++ G + EA F +
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Query: 272 GKNGMTPKSEHYACMV 287
++G TP Y ++
Sbjct: 552 KEDGCTPDDFTYNILI 567
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 159/359 (44%), Gaps = 25/359 (6%)
Query: 1 MLRVGVFPDHLTF-PFL---AKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYS 56
M+ G PD +T+ P L K+ L +L + KA V +SL
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK-DG 259
Query: 57 SFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGD----ISMARQVFDLMPEQDVL 108
SF D A +F+ + +K ++V+++S++ G G M R++ DV+
Sbjct: 260 SFDD---ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
++S LID +V++G EA ++ EM G P+ +T S++ L + M +
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR----SGLMKPSDVFIWNSMIGGFACHG 224
+ +V + L++ Y K + + + +FR GL+ + +N+++ GF G
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI--PNTITYNTLVLGFCQSG 434
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA 284
+ + +LF EM GV P +TY LL G + +A F+ + K+ MT Y
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 285 CMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
++ M A +V +A+ C + ++P ++ G G L A+ + RK+ E
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 12/248 (4%)
Query: 103 PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM-VSVLCACAHLGALDKG 161
P + ++ L R YD L + M ++G + + TM + + C C L
Sbjct: 66 PLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAF 125
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH-VFRSGLMKPS-DVFIWNSMIGG 219
++ P T+ T LV+ + G + EA+ V R MK D+ +++I G
Sbjct: 126 SVLGRAWKLGYEPDTITFST-LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 184
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
G V E+L L M G +PDE+TY +L+ G A F + + +
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLD-----LA 331
Y+ ++D + + G +A ++ I+ +L+ G N GK D L
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 332 ETVGRKLI 339
E +GR +I
Sbjct: 305 EMIGRNII 312
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 162/355 (45%), Gaps = 17/355 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G PD +T+ + +L + + + E + N++I ++
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ +A +F + K N+V+++S++ G S A ++ M E+ DV ++S
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LID +V++G EA +++EM P+ VT S++ LD+ + M +++
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVKE 228
+V +L+ + K ++E + VFR GL+ + +N +I G G
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV--GNTVTYNILIQGLFQAGDCDM 449
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+ ++F EM GV P+ +TY LL G +++A F+ L ++ M P Y M++
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 289 VMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
M +AG+V + + C + ++P +++G G + A+ + +++ E
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 147/300 (49%), Gaps = 16/300 (5%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVF 99
D F ++LI + + A K++D + +++ V+++S+++G+ + A+Q+F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 100 DLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
+ M + DV++++ LI G+ + +E + VF EM G N VT ++
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGLMKPSDVFI 212
G D + + ++ + +P ++ +L+D K G +++A+ VF + M+P+ ++
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT-IYT 503
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
+N MI G G V++ DLF + + GVKPD + Y ++S G +EA F +
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 273 KNGMTPKSEHYACMVDVMARAGQ---VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLD 329
++G P S Y ++ R G AE + + AS +G L+ ++ G+LD
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 622
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 166/386 (43%), Gaps = 56/386 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRE---LGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M +G+ +H T+ L C +R L LA+ G + K GYE + +SL++ Y
Sbjct: 107 MQNLGIPHNHYTYSILIN---CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163
Query: 58 FRDIPNARKVFDGIPVK----NLVSWNSML------------------------------ 83
+ I A + D + V N V++N+++
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 84 -----DGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+G K GD +A + + M E VL ++ +IDG + D+AL +F+EM
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 135 VSGPKPNEVTMVSVL-CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
G +PN VT S++ C C + D R++ +I+ ++ + ++L+D + K G +
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD-MIERKINPDVFTFSALIDAFVKEGKL 342
Query: 194 QEALHVFRSGLMKPSD--VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
EA ++ + + D + ++S+I GF H + E+ +F M PD +TY L
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ---VAEAYQFLCQIPI 308
+ V+E F + + G+ + Y ++ + +AG E ++ + +
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 309 QPTASMLGALLNGCMNHGKLDLAETV 334
P LL+G +GKL+ A V
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVV 488
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 130/328 (39%), Gaps = 82/328 (25%)
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK----GRMM-------HHYVID-- 170
D+A+A+F EM S P P+ + +L A A + D G M +HY
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 171 -------NELPLTL---------------VLRTSLVDMYAKCGAIQEAL----HVFRSGL 204
++LPL L V +SL++ Y I EA+ +F +G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY---------------- 248
+P+ V +N++I G H E++ L M G +PD +TY
Sbjct: 183 -QPNTV-TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 249 LNLLSACAHG--------------GLVK-----EAWYFFDCLGKNGMTPKSEHYACMVDV 289
NLL+ G GL K +A F + G+ P Y+ ++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 290 MARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPH 344
+ G+ ++A + L + I P AL++ + GKL AE + ++++ ++P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 345 QDGRYVGLSNVYAIFRRWDKARSMREAM 372
Y L N + + R D+A+ M E M
Sbjct: 361 I-VTYSSLINGFCMHDRLDEAKQMFEFM 387
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 150/312 (48%), Gaps = 17/312 (5%)
Query: 36 ITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGD 91
I AG+ + +V N L++ + +I +A+KVFD I ++L VS+N++++GY K G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 92 IS----MARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+ + Q+ DV ++S LI+ ++ D A +F+EM G PN+V +
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV----FRSG 203
++ + G +D + + ++ L +VL +LV+ + K G + A ++ R G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
L +P D + ++I GF G V+ +L++ EM G++ D + + L+ G V +
Sbjct: 411 L-RP-DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLN 320
A + + G+ P Y M+D + G ++ L ++ P+ LLN
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLN 528
Query: 321 GCMNHGKLDLAE 332
G G++ A+
Sbjct: 529 GLCKLGQMKNAD 540
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 14/221 (6%)
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF-----RSGLMKPSDVFIWNSMIGGFAC 222
++D PL + + L++ + K G I +A VF RS ++P+ V +N++I G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS--LQPT-VVSFNTLINGYCK 287
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH 282
G + E L +M +PD TY L++A + A FD + K G+ P
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 283 YACMVDVMARAGQV---AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
+ ++ +R G++ E+YQ + +QP + L+NG +G L A + +I
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 340 E--LEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
L P + Y L + + + A +R+ M++ G++
Sbjct: 408 RRGLRPDKIT-YTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 181/386 (46%), Gaps = 26/386 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR---ELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M++ G PD +T+ + L KR +L L++ + K E+D + N++I
Sbjct: 214 MVQRGCQPDLVTYGTVVNG---LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 58 FRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLS 109
++ + +A +F + K ++ +++S++ G S A ++ M E+ +V++
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
+S LID +V++G EA +++EM P+ T S++ LD+ + M +I
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGL 225
+ +V ++L+ + K ++E + +FR GL+ + + ++I GF
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV--GNTVTYTTLIHGFFQARD 448
Query: 226 VKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC 285
+ +F +M VGV P+ +TY LL G + +A F+ L ++ M P Y
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 286 MVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
M++ M +AG+V + ++ C + ++ P +++G G + A+++ +K+ E
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 343 P-HQDGRYVGLSNVYAIFRRWDKARS 367
P G Y L + A R D+ S
Sbjct: 569 PLPNSGTYNTL--IRARLRDGDREAS 592
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 164/386 (42%), Gaps = 56/386 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRE---LGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M +G+ D T+ C +R L LA+ + K GYE D +SL++ Y
Sbjct: 109 MQTLGISHDLYTYSIFIN---CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 58 FRDIPNARKVFD-------------------GIPVKN--------------------LVS 78
+ I +A + D G+ + N LV+
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 79 WNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+ ++++G K GDI +A + M E DV+ ++ +IDG + D+AL +F EM
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 135 VSGPKPNEVTMVSVL-CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
G +P+ T S++ C C + D R++ +I+ ++ +V ++L+D + K G +
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD-MIERKINPNVVTFSALIDAFVKEGKL 344
Query: 194 QEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
EA ++ + + D+F ++S+I GF H + E+ +F M P+ +TY L
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPI 308
+ V+E F + + G+ + Y ++ +A A ++ + + +
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 309 QPTASMLGALLNGCMNHGKLDLAETV 334
P LL+G +GKL A V
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVV 490
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 156/348 (44%), Gaps = 15/348 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+++G PD +T L + +A+ + + GY+ D +LIH
Sbjct: 744 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 803
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSC 112
A + D + + +LV++ ++++G K GD +A + + M E +V+ +S
Sbjct: 804 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 863
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL-CACAHLGALDKGRMMHHYVIDN 171
+ID + D+AL +F EM G +PN +T S++ C C + D R++ +I+
Sbjct: 864 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSD-MIER 922
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD--VFIWNSMIGGFACHGLVKES 229
++ LV ++L+D + K G + +A ++ + + D +F ++S+I GF + E+
Sbjct: 923 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 982
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
+ M P+ +TY L++ V + F + + G+ + Y ++
Sbjct: 983 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 1042
Query: 290 MARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
+A A ++ + + + P LL+G +GKL A V
Sbjct: 1043 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 1090
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 166/384 (43%), Gaps = 49/384 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ FP + F L A A + K EL +++ + G D + + I+ +
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 61 IPNARKVFDGIPV----KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ A V + ++V+ +S+L+GY IS A + D M E D +++
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI G EA+A+ ++M G +P+ VT +V+ G +D
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID------------- 240
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
L SL+ K G I+ +DV I+N++I G + + ++L+L
Sbjct: 241 ------LALSLLKKMEK-GKIE-------------ADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
F+EM G++PD TY +L+S + G +A + + + P ++ ++D +
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 293 AGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRY 349
G++ EA Y + + I P +L+NG H +LD A + + EL +D +
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA----KHMFELMISKDC-F 395
Query: 350 VGLSNVYAIFRRWDKARSMREAME 373
+ + + + KA+ + E ME
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGME 419
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 143/307 (46%), Gaps = 14/307 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ G PD +T+ + +L L + + A E++ + +++I +R
Sbjct: 814 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 873
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+A +F + K N+++++S++ G S A ++ M E+ +++++S
Sbjct: 874 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 933
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LID +V+KG +A ++EEM PN T S++ L L + + M +I +
Sbjct: 934 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 993
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVKE 228
+V +L++ + K + + + +FR GL+ + + ++I GF
Sbjct: 994 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV--GNTVTYTTLIHGFFQARDCDN 1051
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+ +F +M VGV P+ +TY LL G + +A F+ L ++ M P Y M++
Sbjct: 1052 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 1111
Query: 289 VMARAGQ 295
M +AG+
Sbjct: 1112 GMCKAGK 1118
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 159/371 (42%), Gaps = 59/371 (15%)
Query: 72 PVKNLVSWNSMLDGYAKCGD----ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
P +++ ++ +L AK IS ++ L ++ +++ LI+ + R AL
Sbjct: 679 PFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLAL 738
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAH-------------------------LGALDKGR 162
A+ +M G +P+ VT+ S+L H L G
Sbjct: 739 ALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL 798
Query: 163 MMHHY------VIDNELPL----TLVLRTSLVDMYAKCGAIQEALHVFRS--GLMKPSDV 210
+H+ +ID + LV ++V+ K G AL++ ++V
Sbjct: 799 FLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANV 858
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
I++++I + ++L+LF+EM GV+P+ ITY +L+S + G +A
Sbjct: 859 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSD 918
Query: 271 LGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNG-CMNHG 326
+ + + P ++ ++D + G++ +A Y+ + + I P +L+NG CM
Sbjct: 919 MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM--- 975
Query: 327 KLD-LAETVGRKLIELEPHQDG-----RYVGLSNVYAIFRRWDKARSM-REAMERMGVKK 379
LD L E ++++EL +D Y L N + +R DK + RE +R V
Sbjct: 976 -LDRLGE--AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGN 1032
Query: 380 SPGYSFVEMHG 390
+ Y+ + +HG
Sbjct: 1033 TVTYTTL-IHG 1042
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 166/388 (42%), Gaps = 47/388 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V P+ T+ + L E I +AG + D F SLI Y +D
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQD----VLSWSC 112
+ +A KVF+ +P+K N V++ ++ G I A +F M + + V +++
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI EAL + +EM +G KPN T ++ + +K R + +++
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHV---FRSGLMKPS--------------------- 208
L ++ +L++ Y K G I++A+ V S + P+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG 448
Query: 209 ------------DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
DV +NS+I G G + L S M+ G+ PD+ TY +++ +
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTAS 313
V+EA FD L + G+ P Y ++D +AG+V EA+ L ++ + P +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 314 MLGALLNGCMNHGKLDLAETVGRKLIEL 341
AL++G GKL A + K++++
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKI 596
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 150/377 (39%), Gaps = 90/377 (23%)
Query: 49 NSLIHMYSSFRDIPNARKVF----DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
N+L++ + F + ++V+ + N+ ++N M++GY K G++ A Q + E
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 105 Q----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
D +++ LI GY ++ D D A VF EM + G + NEV ++ +D+
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA-----------------IQEALHVF--- 200
+ + D+E T +RT V + + CG+ I+ +H +
Sbjct: 307 AMDLFVKMKDDECFPT--VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 201 ---------------------RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH-- 237
GLM +V +N++I G+ G++++++D+ M
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLM--PNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 238 ------------IVG--------------------VKPDEITYLNLLSACAHGGLVKEAW 265
I G V PD +TY +L+ G A+
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGC 322
+ G+ P Y M+D + ++ +V EA + L Q + P M AL++G
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 323 MNHGKLDLAETVGRKLI 339
GK+D A + K++
Sbjct: 543 CKAGKVDEAHLMLEKML 559
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 127/323 (39%), Gaps = 33/323 (10%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVF 99
D NSLI + +A ++ + + LV ++ SM+D K + A +F
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 100 DLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
D + ++ +V+ ++ LIDGY + G DEA + E+M PN +T +++
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFI 212
G L + ++ ++ L T+ T L+ K G A F+ L KP D
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP-DAHT 639
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
+ + I + G + ++ D+ ++M GV PD TY +L+ G A+ +
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 273 KNGMTPK---------------------SEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
G P SE C + M V E + + + + P
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759
Query: 312 ASMLGALLNGCMNHGKLDLAETV 334
A L+ G G L +AE V
Sbjct: 760 AKSYEKLILGICEVGNLRVAEKV 782
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 155/348 (44%), Gaps = 15/348 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+++G P +T L + +A+ + + GY D +LIH
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSC 112
A + D + + NLV++ +++G K GD +A + + M E DV+ ++
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL-CACAHLGALDKGRMMHHYVIDN 171
+ID + D+AL +F+EM G +PN VT S++ C C++ D +++ +I+
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD-MIEK 324
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKES 229
++ LV +L+D + K G EA ++ + + D+F +NS++ GF H + ++
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
+F M PD +TY L+ V++ F + G+ + Y ++
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 290 MARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETV 334
+ G A + Q+ + P LL+G N+GKL+ A V
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 146/296 (49%), Gaps = 18/296 (6%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
N+LI + A K++D + + ++ ++NS+++G+ + A+Q+F+ M
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 105 QD----VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+D V++++ LI G+ + ++ +F EM G + VT +++ H G D
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS----DVFIWNSM 216
+ + ++ + +P ++ + L+D G +++AL VF M+ S D++I+ +M
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF--DYMQKSEIKLDIYIYTTM 511
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
I G G V + DLF + + GVKP+ +TY ++S L++EA+ + ++G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLD 329
P S Y ++ R G A + + + ++ AS +G + N ++ G+LD
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN-MLHDGRLD 626
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 46/306 (15%)
Query: 72 PVKNLVSWNSMLDGYAKCGD----ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
P+ ++V +N +L AK IS+ ++ L + +++ LI+ + R+ AL
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGAL-DKGRMMHHYVIDNELPLTLVLRT----- 181
A+ +M G +P+ VT+ S+L H + D ++ V P T+ T
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 182 ----------SLVDMYAKCGAIQEALH--VFRSGLMK-------------------PSDV 210
+LVD + G + V +GL K +DV
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA-CAHGGLVKEAWYFFD 269
I+N++I + V ++L+LF EM G++P+ +TY +L+S C++G + D
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHG 326
+ K + P + ++D + G+ EA Y + + I P +L+NG H
Sbjct: 321 MIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 327 KLDLAE 332
+LD A+
Sbjct: 380 RLDKAK 385
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 144/325 (44%), Gaps = 33/325 (10%)
Query: 115 DGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
D +G++ EA+ V + + G + + ++ + C AL+ R++H +I P
Sbjct: 92 DSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSP 151
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNS-----MIGGFACHGLVKES 229
+ R ++++MY+ C ++ +AL VF ++ WNS M+ F +G +E+
Sbjct: 152 CDVGARNAIIEMYSGCCSVDDALKVFE-------EMPEWNSGTLCVMMRCFVNNGYGEEA 204
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVD 288
+DLF+ G KP+ + + S C G VKE F + + G+ P EHY +
Sbjct: 205 IDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTK 264
Query: 289 VMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGR 348
++A +G + EA F+ ++P++P+ + L+N HG ++L G + EL D
Sbjct: 265 MLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVEL----GDRCAELVEKLDA- 319
Query: 349 YVGLSNVYAIFRRWDKARSMREAMERMG--VKKSPGYSFVEMHGALHRFVAHDKSHPSSE 406
R DK S + VKK P + R V D SHP
Sbjct: 320 -----------TRLDKVSSAGLVATKASDFVKKEPSTRSEPYFYSTFRPV--DSSHPQMN 366
Query: 407 QIYMMLGFIVSQMKHIVDYENQEYY 431
IY L + SQ+K + + YY
Sbjct: 367 IIYETLMSLRSQLKEMGYVPDTRYY 391
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++++ Y+ C + A +VF+ MPE + + ++ +V G +EA+ +F + G K
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVI-DNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PN V C G + +G + + + + ++ S+ M A G + EAL+
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
M+PS V +W +++ HG V+
Sbjct: 278 FVERMPMEPS-VDVWETLMNLSRVHGDVE 305
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 157/322 (48%), Gaps = 24/322 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKA--------SACLLKRELGLAIHGYITKAGYESDRFVSNSLI 52
M R G PD +++ L SA L+ L A HG+I K D NSL
Sbjct: 82 MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR-ASHGFICKP----DIVSFNSLF 136
Query: 53 HMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ--- 105
+ +S + + V+ G+ +K N+V++++ +D + K G++ +A + F M
Sbjct: 137 NGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALS 195
Query: 106 -DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM 164
+V++++CLIDGY + GD + A+++++EMR N VT +++ G + + M
Sbjct: 196 PNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEM 255
Query: 165 HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS--DVFIWNSMIGGFAC 222
+ ++++ + ++ T+++D + + G A+ L + D+ + +I G
Sbjct: 256 YSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCG 315
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH 282
+G +KE+ ++ +M + PD + + +++A G +K A + L + G P
Sbjct: 316 NGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVA 375
Query: 283 YACMVDVMARAGQVAEAYQFLC 304
+ M+D +A+ GQ+ EA + C
Sbjct: 376 LSTMIDGIAKNGQLHEAIVYFC 397
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 143/334 (42%), Gaps = 19/334 (5%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV----KNLVSWNSML 83
L L Y+ GY R NS++ + A + +P +++S+NS++
Sbjct: 39 LSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLI 98
Query: 84 DGYAKCGDISMARQVFD-------LMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS 136
DG+ + GDI A V + + + D++S++ L +G+ + DE V+ + +
Sbjct: 99 DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLK 157
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
PN VT + + G L H + + L +V T L+D Y K G ++ A
Sbjct: 158 CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 197 LHVFRS--GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+ +++ + +V + ++I GF G ++ + +++S M V+P+ + Y ++
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPT 311
G A F + GM Y ++ + G++ EA + + + + P
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIE--LEP 343
+ ++N G++ A + KLIE EP
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 119/300 (39%), Gaps = 71/300 (23%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWSCLIDGYVRKGDYD------ 124
N+V++ +++DG+ K G++ A +++ M E V L ++ +IDG+ ++GD D
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 125 -----------------------------EALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
EA + E+M S P+ V +++ A
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL-------------HVFRS 202
G + M+H +I+ +V ++++D AK G + EA+ V
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLID 411
Query: 203 GLMKPSDV-------------------FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
L K D F++ S I G G + ++ L + M G+
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
D + Y L+ A GL+ EA FD + +G++P S + ++ + G +A A L
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL 531
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 178/385 (46%), Gaps = 27/385 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR---ELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M++ G PD +T+ + L KR +L L + + A +++ + N++I
Sbjct: 214 MVQRGCQPDLVTYGTVVNG---LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 58 FRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLS 109
+R + A +F + K N+V++NS+++ G S A ++ M E+ +V++
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA-CAHLGALDKGRMMHHYV 168
++ LID + ++G EA + EEM P+ +T ++ C H LD+ + M ++
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH-NRLDEAKQMFKFM 389
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHG 224
+ + + +L++ + KC +++ + +FR GL+ + + ++I GF G
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV--GNTVTYTTIIQGFFQAG 447
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA 284
+ +F +M V D +TY LL G + A F L K+ M Y
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 285 CMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LE 342
M++ M +AG+V EA+ C + I+P +++G + L A+ + RK+ E
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 343 PHQDGRYVGLSNVYAIFRRWDKARS 367
P+ G Y L + A R D+A S
Sbjct: 568 PNS-GTYNTL--IRANLRDCDRAAS 589
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 15/356 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+++G PD +T L + +A+ + + GY+ D F +LIH
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSC 112
A + D + + +LV++ ++++G K GDI +A + + M + +V+ ++
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL-CACAHLGALDKGRMMHHYVIDN 171
+ID + + A+ +F EM G +PN VT S++ C C + D R++ + +++
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN-MLEK 322
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKES 229
++ +V +L+D + K G + EA + + + D +N +I GF H + E+
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
+F M P+ TY L++ V++ F + + G+ + Y ++
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 290 MARAGQVAEAYQFLCQIPIQ--PTASML-GALLNGCMNHGKLDLAETVGRKLIELE 342
+AG A Q+ PT M LL+G ++GKLD A + + L + E
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 150/361 (41%), Gaps = 46/361 (12%)
Query: 72 PVKNLVSWNSMLDGYAKCGD----ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
P ++V +N +L AK IS+ Q+ L D+ ++S I+ + R+ AL
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAH-------------------------LGALDKGR 162
AV +M G +P+ VT+ S+L H L G
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 163 MMHH----------YVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS--GLMKPSDV 210
+H+ ++ LV ++V+ K G I AL++ ++V
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
I+N++I + V+ ++DLF+EM G++P+ +TY +L++ + G +A
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 271 LGKNGMTPKSEHYACMVDVMARAGQVAEAYQF---LCQIPIQPTASMLGALLNGCMNHGK 327
+ + + P + ++D + G++ EA + + Q I P L+NG H +
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 328 LDLAETVGRKLIELEPHQD-GRYVGLSNVYAIFRRW-DKARSMREAMERMGVKKSPGYSF 385
LD A+ + + ++ + + Y L N + +R D RE +R V + Y+
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 386 V 386
+
Sbjct: 439 I 439
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 155/349 (44%), Gaps = 17/349 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+++G P +T L + +A+ + + GY D +LIH
Sbjct: 70 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 129
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSC 112
A + D + + NLV++ +++G K GDI +A + + M E DV+ ++
Sbjct: 130 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 189
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL-CACAHLGALDKGRMMHHYVIDN 171
+ID + D+AL +F+EM G +PN VT S++ C C++ D +++ +I+
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD-MIEK 248
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS---DVFIWNSMIGGFACHGLVKE 228
++ LV +L+D + K G EA ++K S D+F +NS+I GF H + +
Sbjct: 249 KINPNLVTFNALIDAFVKEGKFVEA-EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 307
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+ +F M PD TY L+ V++ F + G+ + Y ++
Sbjct: 308 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 367
Query: 289 VMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETV 334
+ G A + Q+ + P LL+G N+GKL+ A V
Sbjct: 368 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 416
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 143/296 (48%), Gaps = 18/296 (6%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
N+LI + A K+ D + + ++ ++NS+++G+ + A+Q+F+ M
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 317
Query: 105 QDVL----SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+D +++ LI G+ + ++ +F EM G + VT +++ H G D
Sbjct: 318 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 377
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS----DVFIWNSM 216
+ + ++ + +P ++ + L+D G +++AL VF M+ S D++I+ +M
Sbjct: 378 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF--DYMQKSEIKLDIYIYTTM 435
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
I G G V + DLF + + GVKP+ +TY ++S L++EA+ + ++G
Sbjct: 436 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 495
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLD 329
P S Y ++ R G A + + + ++ AS +G + N ++ G+LD
Sbjct: 496 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN-MLHDGRLD 550
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 125/273 (45%), Gaps = 13/273 (4%)
Query: 72 PVKNLVSWNSMLDGYAKCGD----ISMAR--QVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
P+ ++ +N +L AK IS+A ++ L E +++ S L++GY +
Sbjct: 38 PLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 97
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A+A+ ++M G +P+ +T +++ + + ++ LV +V+
Sbjct: 98 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 157
Query: 186 MYAKCGAIQEALHVFRS--GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
K G I A ++ +DV I+N++I + V ++L+LF EM G++P
Sbjct: 158 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 217
Query: 244 DEITYLNLLSA-CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
+ +TY +L+S C++G + D + K + P + ++D + G+ EA +
Sbjct: 218 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKL 276
Query: 303 ---LCQIPIQPTASMLGALLNGCMNHGKLDLAE 332
+ + I P +L+NG H +LD A+
Sbjct: 277 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 309
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 146/309 (47%), Gaps = 19/309 (6%)
Query: 35 YITKAGYESDRFVSNSLIHMYSSFRDIPNA----RKVFDGIPVKNLVSWNSMLDGYAKCG 90
++ G ++D N LIH I R + + N V++N++++G++ G
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312
Query: 91 DISMARQV------FDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT 144
+ +A Q+ F L P ++++ LIDG++ +G++ EAL +F M G P+EV+
Sbjct: 313 KVLIASQLLNEMLSFGLSPNH--VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
+L D R + + N + + + T ++D K G + EA+ V + +
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV-VLLNEM 429
Query: 205 MKPS---DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
K D+ ++++I GF G K + ++ ++ VG+ P+ I Y L+ C G +
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL-CQIP--IQPTASMLGAL 318
KEA ++ + G T + +V + +AG+VAEA +F+ C I P L
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 319 LNGCMNHGK 327
+NG N G+
Sbjct: 550 INGYGNSGE 558
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 141/314 (44%), Gaps = 13/314 (4%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMA 95
G + N+LI + S + A K+F + K L VS+ +LDG K + +A
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 387
Query: 96 RQVFDLMPEQDV----LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
R + M V ++++ +IDG + G DEA+ + EM G P+ VT +++
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSD 209
+G + + + L ++ ++L+ + G ++EA+ ++ + +++ D
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
F +N ++ G V E+ + M G+ P+ +++ L++ + G +A+ FD
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA---SMLGALLNGCMNHG 326
+ K G P Y ++ + + G + EA +FL + P A M LL G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 327 KLDLAETVGRKLIE 340
L A ++ ++++
Sbjct: 628 NLAKAVSLFGEMVQ 641
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 139/343 (40%), Gaps = 49/343 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ PD +T+ L + + + I I + G + + ++LI+
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488
Query: 61 IPNARKVFDGIPV----KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSC 112
+ A ++++ + + ++ ++N ++ K G ++ A + M +L S+ C
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI+GY G+ +A +VF+EM G P T G+L KG
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY----------GSLLKG----------- 587
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS--DVFIWNSMIGGFACHGLVKESL 230
K G ++EA +S P+ D ++N+++ G + +++
Sbjct: 588 --------------LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633
Query: 231 DLFSEMHIVGVKPDEITYLNLLSA-CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
LF EM + PD TY +L+S C G V + + + + P Y C VD
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDG 693
Query: 290 MARAGQVAEAYQFLCQIPI---QPTASMLGALLNGCMNHGKLD 329
M +AGQ F Q+ P A+++G GK++
Sbjct: 694 MFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 113/278 (40%), Gaps = 26/278 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD LT L E+GL I G E DR+ N LI + +I A
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843
Query: 65 RKVFDGIPVKNLV-------SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWS----CL 113
FD + V + + ++M+ + +R V M +Q + S L
Sbjct: 844 ---FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 900
Query: 114 IDGYVRKGDYDEALAVFEEM---RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
I+G R GD A V EEM ++ P E MV L C G D+ ++ +++
Sbjct: 901 INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC---GKADEATLLLRFMLK 957
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEA--LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+L T+ T+L+ + K G + EA L V S D+ +N +I G G +
Sbjct: 958 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1017
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
+ +L+ EM G + TY A G L +E +
Sbjct: 1018 AFELYEEMKGDGFLANATTY----KALIRGLLARETAF 1051
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 121/282 (42%), Gaps = 9/282 (3%)
Query: 70 GIPVKNLVSWNSMLDGYAKCGD----ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
G + N V + +DG K G I Q+ +L D+++ + +IDGY R G ++
Sbjct: 678 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 737
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
+ EM PN T +L + + +++ +I N + + SLV
Sbjct: 738 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 797
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDV--FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ ++ L + ++ + + +V + +N +I +G + + DL M +G+
Sbjct: 798 GICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL 857
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY--- 300
D+ T ++S +E+ + K G++P+S Y +++ + R G + A+
Sbjct: 858 DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 917
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
+ + I P A++ GK D A + R +++++
Sbjct: 918 EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 959
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 115/268 (42%), Gaps = 19/268 (7%)
Query: 79 WNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
++ ++ Y + G I + ++F LM V + + ++ V+ G+ + +EM
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 135 VSGPKPNEVT---MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
P+ T +++VLCA G+ +K + + + T+V +++ Y K G
Sbjct: 186 KRKICPDVATFNILINVLCA---EGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 192 AIQEAL----HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+ A+ H+ G+ +DV +N +I + + L +M + P+E+T
Sbjct: 243 RFKAAIELLDHMKSKGV--DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
Y L++ ++ G V A + + G++P + ++D G EA + +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360
Query: 308 ---IQPTASMLGALLNGCMNHGKLDLAE 332
+ P+ G LL+G + + DLA
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLAR 388
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 156/330 (47%), Gaps = 18/330 (5%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
N+ S+N ++ + G I A + LM + DV+S+S +++GY R G+ D+ +
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 131 EEMRVSGPKPNEV---TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
E M+ G KPN +++ +LC L ++ + LP T+V T+L+D +
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA--FSEMIRQGILPDTVVY-TTLIDGF 804
Query: 188 AKCGAIQEALHVF---RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
K G I+ A F S + P DV + ++I GF G + E+ LF EM G++PD
Sbjct: 805 CKRGDIRAASKFFYEMHSRDITP-DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL- 303
+T+ L++ G +K+A+ + + + G +P Y ++D + + G + A + L
Sbjct: 864 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 923
Query: 304 --CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFR 360
+I +QP +++NG G ++ A + + + D Y L + Y
Sbjct: 924 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 983
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHG 390
DKA+ + + M G++ + V M+G
Sbjct: 984 EMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 144/311 (46%), Gaps = 19/311 (6%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVS----WNSMLDGYAKCGDISMA 95
GY D +++++ Y F ++ K+ + + K L + S++ + ++ A
Sbjct: 719 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 778
Query: 96 RQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+ F M Q D + ++ LIDG+ ++GD A F EM P+ +T +++
Sbjct: 779 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 838
Query: 152 CAHLGAL-DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL----HVFRSGLMK 206
+G + + G++ H P ++ T L++ Y K G +++A H+ ++G
Sbjct: 839 FCQIGDMVEAGKLFHEMFCKGLEPDSVTF-TELINGYCKAGHMKDAFRVHNHMIQAGC-- 895
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
+V + ++I G G + + +L EM +G++P+ TY ++++ G ++EA
Sbjct: 896 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 955
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCM 323
G+ + Y ++D ++G++ +A + L ++ +QPT L+NG
Sbjct: 956 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 1015
Query: 324 NHGKLDLAETV 334
HG L+ E +
Sbjct: 1016 LHGMLEDGEKL 1026
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 146/362 (40%), Gaps = 67/362 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAG---YE-------SDRFVSNS 50
M+R G+ PD + + L G G I A YE D +
Sbjct: 785 MIRQGILPDTVVYTTLID----------GFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQ- 105
+I + D+ A K+F + K L V++ +++GY K G + A +V + M +
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894
Query: 106 ---DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
+V++++ LIDG ++GD D A + EM G +PN T S++ G +++
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 163 MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFIWNSMIGG 219
+ L V T+L+D Y K G + +A + + L ++P+ + +N ++ G
Sbjct: 955 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT-IVTFNVLMNG 1013
Query: 220 FACHGLV-----------------------------------KESLDLFSEMHIVGVKPD 244
F HG++ K + ++ +M GV PD
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
TY NL+ +KEAW+ F + G + Y+ ++ + + EA +
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 1133
Query: 305 QI 306
Q+
Sbjct: 1134 QM 1135
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 123/296 (41%), Gaps = 12/296 (4%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD +TF L + +H ++ +AG + +LI D+ +A
Sbjct: 859 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 918
Query: 65 RKVFDGI----PVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDG 116
++ + N+ ++NS+++G K G+I A ++ D ++++ L+D
Sbjct: 919 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 978
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA-CAHLGALDKGRMMHHYVIDNELPL 175
Y + G+ D+A + +EM G +P VT ++ C H G L+ G + ++++ +
Sbjct: 979 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH-GMLEDGEKLLNWMLAKGIAP 1037
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLF 233
SLV Y ++ A +++ + D + +++ G +KE+ LF
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
EM G TY L+ EA FD + + G+ E + D
Sbjct: 1098 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 1153
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 156/330 (47%), Gaps = 18/330 (5%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
N+ S+N ++ + G I A + LM + DV+S+S +++GY R G+ D+ +
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 131 EEMRVSGPKPNEV---TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
E M+ G KPN +++ +LC L ++ + LP T+V T+L+D +
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA--FSEMIRQGILPDTVVY-TTLIDGF 804
Query: 188 AKCGAIQEALHVF---RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
K G I+ A F S + P DV + ++I GF G + E+ LF EM G++PD
Sbjct: 805 CKRGDIRAASKFFYEMHSRDITP-DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL- 303
+T+ L++ G +K+A+ + + + G +P Y ++D + + G + A + L
Sbjct: 864 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 923
Query: 304 --CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFR 360
+I +QP +++NG G ++ A + + + D Y L + Y
Sbjct: 924 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 983
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHG 390
DKA+ + + M G++ + V M+G
Sbjct: 984 EMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 144/311 (46%), Gaps = 19/311 (6%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVS----WNSMLDGYAKCGDISMA 95
GY D +++++ Y F ++ K+ + + K L + S++ + ++ A
Sbjct: 719 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 778
Query: 96 RQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+ F M Q D + ++ LIDG+ ++GD A F EM P+ +T +++
Sbjct: 779 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 838
Query: 152 CAHLGAL-DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL----HVFRSGLMK 206
+G + + G++ H P ++ T L++ Y K G +++A H+ ++G
Sbjct: 839 FCQIGDMVEAGKLFHEMFCKGLEPDSVTF-TELINGYCKAGHMKDAFRVHNHMIQAGC-- 895
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
+V + ++I G G + + +L EM +G++P+ TY ++++ G ++EA
Sbjct: 896 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 955
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCM 323
G+ + Y ++D ++G++ +A + L ++ +QPT L+NG
Sbjct: 956 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 1015
Query: 324 NHGKLDLAETV 334
HG L+ E +
Sbjct: 1016 LHGMLEDGEKL 1026
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 146/362 (40%), Gaps = 67/362 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAG---YE-------SDRFVSNS 50
M+R G+ PD + + L G G I A YE D +
Sbjct: 785 MIRQGILPDTVVYTTLID----------GFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQ- 105
+I + D+ A K+F + K L V++ +++GY K G + A +V + M +
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894
Query: 106 ---DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
+V++++ LIDG ++GD D A + EM G +PN T S++ G +++
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 163 MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFIWNSMIGG 219
+ L V T+L+D Y K G + +A + + L ++P+ + +N ++ G
Sbjct: 955 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT-IVTFNVLMNG 1013
Query: 220 FACHGLV-----------------------------------KESLDLFSEMHIVGVKPD 244
F HG++ K + ++ +M GV PD
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
TY NL+ +KEAW+ F + G + Y+ ++ + + EA +
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 1133
Query: 305 QI 306
Q+
Sbjct: 1134 QM 1135
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 123/296 (41%), Gaps = 12/296 (4%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD +TF L + +H ++ +AG + +LI D+ +A
Sbjct: 859 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 918
Query: 65 RKVFDGI----PVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDG 116
++ + N+ ++NS+++G K G+I A ++ D ++++ L+D
Sbjct: 919 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 978
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA-CAHLGALDKGRMMHHYVIDNELPL 175
Y + G+ D+A + +EM G +P VT ++ C H G L+ G + ++++ +
Sbjct: 979 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH-GMLEDGEKLLNWMLAKGIAP 1037
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLF 233
SLV Y ++ A +++ + D + +++ G +KE+ LF
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
EM G TY L+ EA FD + + G+ E + D
Sbjct: 1098 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 1153
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 172/389 (44%), Gaps = 54/389 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G PD TF L + K E L ++ +G + + + + L++
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 61 IPNA-----RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWS 111
I A R++ G+ V N V +N+M+DGY + GD+ AR + M +Q D L+++
Sbjct: 370 IEKAEEILGREMAKGL-VPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 112 CLID-----------------------------------GYVRKGDYDEALAVFEEMRVS 136
CLI GY RK ++D+ + +EM +
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 137 GPKPNEV---TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
G PN V T+++ LC + L + +++ + D + + + L+D G I
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLL---EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 194 QEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
++A + L K ++ +N++I G + G + E+ DL E+ G+KPD TY +L
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
+S G V+ ++ + ++G+ P + Y ++ + + G + + ++ ++P
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPD 664
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+ +L+ HG ++ A + +++IE
Sbjct: 665 LLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 143/359 (39%), Gaps = 61/359 (16%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPE----QDVLSWSCLIDGYVRKGDYDEALAVF 130
+L+++N++L G K G + A V M + D ++S L DGY + AL V+
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDK-----GRMMHHYVIDNELPLTLVLRTSLVD 185
E SG K N T +L A G ++K GR M ++ NE V+ +++D
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE-----VIYNTMID 397
Query: 186 MYAKCGAIQEA---LHVFRSGLMKPS---------------------------------- 208
Y + G + A + MKP
Sbjct: 398 GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
V +N +IGG+ + D+ EM G P+ ++Y L++ G + EA
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF---LCQIPIQPTASMLGALLNGCMNH 325
+ G++PK Y ++D G++ +A++F + + I+ L++G
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 326 GKLDLAE----TVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKS 380
GKL AE + RK ++ + Y L + Y + ++ E M+R G+K +
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFT---YNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/331 (17%), Positives = 140/331 (42%), Gaps = 15/331 (4%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G++P + L + + + + I ++ + +F+ I D+
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 65 RKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLIDG 116
++F+ + ++ +N ++DG K ++ A Q+FD M + +L +++ LIDG
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
Y + G+ +++ V E M+ +P+ +T ++L G ++ + + D
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFS 234
+ L D Y+ + AL V+ + + + + + ++ G ++++ ++
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 235 EMHIVGVKPDEITYLNLLSA-CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
G+ P+E+ Y ++ C G LV A + + K GM P Y C++
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVG-ARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 294 GQVAEAYQFLCQIPIQ---PTASMLGALLNG 321
G++ A + + ++ ++ P+ L+ G
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGG 468
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 41/217 (18%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
NLV++N+++DG + G +S A + + + DV +++ LI GY G+ +A++
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
EEM+ SG KP T ++ C G
Sbjct: 623 EEMKRSGIKPTLKTYHLLISLCTKEG---------------------------------- 648
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
I+ +F +KP D+ ++N ++ +A HG ++++ +L +M + D+ TY +
Sbjct: 649 --IELTERLFGEMSLKP-DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNS 705
Query: 251 LLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
L+ G + E D + M P+++ Y +V
Sbjct: 706 LILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 150/320 (46%), Gaps = 16/320 (5%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSM 82
+L + I + G + + + + LI D NA +V + + N+ V + ++
Sbjct: 495 DLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTI 554
Query: 83 LDGYAKCGDISMARQVFDLMPEQDVLSWSC-----LIDGYVRKGDYDEALAVFEEMRVSG 137
++G K G S AR++ M E+ L SC +IDG+ ++G+ D A+A +EEM +G
Sbjct: 555 INGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG 614
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
PN +T S++ +D+ M + + + L + +L+D + K ++ A
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 198 HVFRSGL---MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+F L + PS I+NS+I GF G + +LDL+ +M G++ D TY L+
Sbjct: 675 ALFSELLEEGLNPSQP-IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ---VAEAYQFLCQIPIQPT 311
G + A + + G+ P Y +V+ +++ GQ V + ++ + + + P
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN 793
Query: 312 ASMLGALLNGCMNHGKLDLA 331
+ A++ G G LD A
Sbjct: 794 VLIYNAVIAGHYREGNLDEA 813
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 152/357 (42%), Gaps = 21/357 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ +GV D++T L +AS K L + + G E D + + + D
Sbjct: 224 MVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLD 283
Query: 61 IPNARKVFDGIPVKNLV-----SWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWS 111
+ A + + K L ++ S++ K G++ A ++ D M +V++ +
Sbjct: 284 LAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAAT 343
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
LI G+ + D AL +F++M GP PN VT ++ G ++K + +
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHV----FRSGLMKPSDVFIWNSMIGGFACHGLVK 227
L ++ +++ + K +EAL + F +GL ++VF+ N+++ G
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL---ANVFVCNTILSWLCKQGKTD 460
Query: 228 ESLDLFSEMHIVGVKPDEITYLN-LLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
E+ +L S+M G+ P+ ++Y N +L C + F + L K G+ P + Y+ +
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK-GLKPNNYTYSIL 519
Query: 287 VDVMAR---AGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+D R E + I+ + ++NG G+ A + +IE
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 154/351 (43%), Gaps = 40/351 (11%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
+ L++ G + K GYE D +SLI+ + +VFD I +LVS
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFC------QGNRVFDAI---DLVS--------- 163
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT--- 144
M F DV+ ++ +IDG + G ++A+ +F+ M G + + VT
Sbjct: 164 -----KMEEMGF----RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
+V+ LC D R+M V+ + +P ++ T+++D++ K G EA+ ++
Sbjct: 215 LVAGLCCSGRWS--DAARLMRDMVMRDIVP-NVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 205 MK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
+ DVF +NS+I G HG V E+ + M G PD +TY L++ V
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 263 EAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG- 321
E F + + G+ + Y ++ +AG+ A + ++ +P LL G
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGL 391
Query: 322 CMN---HGKLDLAETVGRKLIELEPHQDGRYV-GLSNVYAIFRRWDKARSM 368
CMN L L E + + IEL+ + G+ + + WD RS+
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
++ ++NS+++G G + A+Q+ DLM + DV++++ LI+G+ + DE +F
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
EM G + +T +++ G GR I + + +RT + +Y C
Sbjct: 338 REMAQRGLVGDTITYNTII-----QGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLC 392
Query: 191 --GAIQEALHVFRSGLMKPS----DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+++AL +F + M+ S D+ +N +I G G V+++ DLF + G+KPD
Sbjct: 393 MNWRVEKALVLFEN--MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
++Y ++S ++ + + ++G+ P
Sbjct: 451 VVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 16/299 (5%)
Query: 64 ARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLM----PEQDVLSWSCLID 115
A K+ D IP++ ++ ++ ++L Y++ G A +F+ M P +++++ ++D
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 116 GYVRKG-DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
+ + G + + L V +EMR G K +E T +VL ACA G L + + +
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDL 232
V +L+ ++ K G EAL V + P+D +N ++ + G KE+ +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
M GV P+ ITY ++ A G EA F + + G P + Y ++ ++ +
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 293 AGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPHQD 346
+ E + LC + P + +L C N G V R++ EP +D
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 12/317 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G PD TF L A ++G +T+AG+ + N+L++ + D
Sbjct: 482 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGD 541
Query: 61 IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
+ V + K S++ ML YAK G+ ++ + + E + L+
Sbjct: 542 WRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRT 601
Query: 117 YVRKGDYDEALA----VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
+ ALA F + G KP+ V S+L D+ + + ++
Sbjct: 602 LLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG 661
Query: 173 LPLTLVLRTSLVDMYAK---CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES 229
L LV SL+DMY + C +E L +KP D+ +N++I GF GL++E+
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP-DLVSYNTVIKGFCRRGLMQEA 720
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
+ + SEM G++P TY +S G+ E +C+ KN P + +VD
Sbjct: 721 VRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDG 780
Query: 290 MARAGQVAEAYQFLCQI 306
RAG+ +EA F+ +I
Sbjct: 781 YCRAGKYSEAMDFVSKI 797
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 23/226 (10%)
Query: 93 SMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
S+A ++ D +P Q DV +++ ++ Y R G Y++A+ +FE M+ GP P VT +
Sbjct: 192 SVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVI 251
Query: 149 LCACAH--------LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
L LG LD+ M + +E + VL A+ G ++EA F
Sbjct: 252 LDVFGKMGRSWRKILGVLDE--MRSKGLKFDEFTCSTVLSAC-----AREGLLREAKEFF 304
Query: 201 ---RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+S +P V +N+++ F G+ E+L + EM D +TY L++A
Sbjct: 305 AELKSCGYEPGTV-TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
G KEA + + K G+ P + Y ++D +AG+ EA +
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 409
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 12/227 (5%)
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEE 132
V++N++L + K G + A V M E D ++++ L+ YVR G EA V E
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPLTLVLRTSLVDMY 187
M G PN +T +V+ A G D+ M + N VL SL+
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL--SLLGKK 434
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
++ + + L +S P+ WN+M+ G+ K +F EM G +PD T
Sbjct: 435 SRSNEMIKMLCDMKSNGCSPNRA-TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
+ L+SA G +A + + + G Y +++ +AR G
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 151/355 (42%), Gaps = 56/355 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD T+ L + + + AG+ D+ N+L+ +Y A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 65 RKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDG 116
KV + + + ++V++NS++ YA+ G + A ++ + M E+ DV +++ L+ G
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ R G + A+++FEEMR +G KPN T
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTF------------------------------- 422
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
+ + MY G E + +F GL D+ WN+++ F +G+ E +
Sbjct: 423 ----NAFIKMYGNRGKFTEMMKIFDEINVCGL--SPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
F EM G P+ T+ L+SA + G ++A + + G+TP Y ++ +AR
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 293 AGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKL----DLAETVGRKLIE 340
G ++ + L ++ +P +LL+ N ++ LAE V +IE
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 16/319 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G PD T+ L K E ++I + AG + + N+ I MY +
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 61 IPNARKVFDGIPV----KNLVSWNSMLDGYAKCGDISMARQVFDLM------PEQDVLSW 110
K+FD I V ++V+WN++L + + G S VF M PE++ ++
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TF 492
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ LI Y R G +++A+ V+ M +G P+ T +VL A A G ++ + + D
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 171 NELPLTLVLRTSLVDMYA---KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ SL+ YA + G + SG+++P V + ++ C L+
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD-LLP 611
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
E+ FSE+ G PD T +++S +V +A D + + G TP Y ++
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 288 DVMARAGQVAEAYQFLCQI 306
+ +R+ ++ + L +I
Sbjct: 672 YMHSRSADFGKSEEILREI 690
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 139/318 (43%), Gaps = 18/318 (5%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGY---ITKAGYES--DRFVSNSLIHMYSSFRDIP 62
P+ + LA ++ LA+ + + + Y+S D V +I M +
Sbjct: 131 PESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVS 190
Query: 63 NARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLI 114
+A +F+G+ ++ S+ S++ +A G A VF M E +++++ ++
Sbjct: 191 SAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVIL 250
Query: 115 DGYVRKGD-YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
+ + + G +++ ++ E+M+ G P+ T +++ C + + +
Sbjct: 251 NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGF 310
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK---PSDVFIWNSMIGGFACHGLVKESL 230
V +L+D+Y K +EA+ V ++ PS + +NS+I +A G++ E++
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS-IVTYNSLISAYARDGMLDEAM 369
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
+L ++M G KPD TY LLS G V+ A F+ + G P + + +
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429
Query: 291 ARAGQVAEAYQFLCQIPI 308
G+ E + +I +
Sbjct: 430 GNRGKFTEMMKIFDEINV 447
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 133/313 (42%), Gaps = 10/313 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G P+ TF L A + E + ++ + AG D N+++ +
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 61 IPNARKVF----DGIPVKNLVSWNSMLDGYAKCGDI----SMARQVFDLMPEQDVLSWSC 112
+ KV DG N +++ S+L YA +I S+A +V+ + E +
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
L+ + EA F E++ G P+ T+ S++ + K + Y+ +
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESL 230
++ SL+ M+++ ++ + R L K D+ +N++I + + ++++
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
+FSEM G+ PD ITY + + A + +EA + K+G P Y +VD
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Query: 291 ARAGQVAEAYQFL 303
+ + EA F+
Sbjct: 780 CKLNRKDEAKLFV 792
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 136/300 (45%), Gaps = 13/300 (4%)
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCG----DISMARQVFDLMPEQDVLSWSC 112
+ NA +F+ + +K N++++N ++ G+ G + R + +V+++S
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LID +V++G EA + +EM G P+ +T S++ LDK M ++
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESL 230
+ L++ Y K I + L +FR ++ +D +N++I GF G + +
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
+LF EM V P+ +TY LL G ++A F+ + K+ M Y ++ M
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 291 ARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG 347
A +V +A+ C +P ++P ++ G G L AE + RK+ E DG
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 113/237 (47%), Gaps = 10/237 (4%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
+ +++ S++DG+ K + A Q+ DLM + ++ +++ LI+GY + D+ L +F
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+M + G + VT +++ LG L+ + + ++ ++P +V L+D
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 191 GAIQEALHVFRSGLMKPS----DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
G ++AL +F ++ S D+ I+N +I G V ++ DLF + + GVKP
Sbjct: 487 GESEKALEIFEK--IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
TY ++ G + EA F + ++G P Y ++ G ++ + +
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 161/382 (42%), Gaps = 20/382 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR-ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
++++G P+ +TF L CL R L + + + G++ D N+L++
Sbjct: 149 IIKLGYEPNTITFSTLING-LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 60 DIPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWS 111
A + D + N V++ +L+ K G ++A ++ M E+ D + +S
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
+IDG + G D A +F EM + G N +T ++ + G D G + +I
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKES 229
++ +V + L+D + K G ++EA + + + + D + S+I GF + ++
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
+ M G P+ T+ L++ + + F + G+ + Y ++
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 290 MARAGQV---AEAYQFLCQIPIQPTASMLGALLNGCMNHGK----LDLAETVGRKLIELE 342
G++ E +Q + + P LL+G ++G+ L++ E + + +EL+
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 343 PHQDGRYV-GLSNVYAIFRRWD 363
+ G+ N + WD
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWD 529
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 118/266 (44%), Gaps = 9/266 (3%)
Query: 75 NLVSWNSMLDGYAKCGDISMA----RQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
NL + + M++ + +C + +A ++ L E + +++S LI+G +G EAL +
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+ M G KP+ +T+ +++ G + ++ +++ V ++++ K
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 191 GAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
G A+ + R + D ++ +I G HG + + +LF+EM + G+ + ITY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF---LCQ 305
L+ + G + + K + P ++ ++D + G++ EA + +
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLA 331
I P +L++G LD A
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKA 387
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 136/304 (44%), Gaps = 20/304 (6%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMA 95
G + F N L+ DI +A KV D IP V NLV++ ++L GY GD+ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 96 RQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT---MVSV 148
++V + M ++ D +++ L+DGY + G + EA V ++M + +PNEVT M+
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP- 207
LC G + R M +++ L ++D + + EA ++R L
Sbjct: 306 LCKEKKSG---EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 208 -SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
D + +++I G V E+ LF E G P +TY L++ G + EA
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGR 421
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL---CQIPIQPTASMLGALLNGCM 323
+D + + P + Y +++ +++ G V E + L +I P + L G
Sbjct: 422 LWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQ 481
Query: 324 NHGK 327
GK
Sbjct: 482 KLGK 485
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCL----IDGYVRKGDYDEALAVF 130
N V++ M+ K AR +FD M E+ + S L ID DEA ++
Sbjct: 295 NEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLW 354
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+M + P+ + +++ G + + R + +P L T + M K
Sbjct: 355 RKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEK- 413
Query: 191 GAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
G + EA ++ + + F +N +I G + +G VKE + + EM +G P++ T+
Sbjct: 414 GELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473
Query: 249 LNLLS-----------------ACAHGGLVKEAWYFF 268
L L A +G + KE+W F
Sbjct: 474 LILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWELF 510
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 170/360 (47%), Gaps = 26/360 (7%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKN------LVSWNSMLDG 85
I+ +I+KA + +SLIH +S RD P+ + ++N +++ S++
Sbjct: 84 INIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYR 143
Query: 86 YAKCGDISMARQVFDLMPEQDV------LSWSCLIDGYVRKGDYDEALAVFEEMRVSGP- 138
+ + G++ A +V ++M ++V S +I G+ + G + AL FE SG
Sbjct: 144 FVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVL 203
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PN VT +++ A LG +D+ R + + D V ++ + Y K GA+ +AL
Sbjct: 204 VPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALM 263
Query: 199 VFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
R + K DV ++ +I G + G V+E+L L +M GV+P+ ITY ++
Sbjct: 264 QDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC 323
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC---QIPIQPTAS 313
G ++EA+ F+ + G+ Y ++D + R G + A+ L Q IQP+
Sbjct: 324 KMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSIL 383
Query: 314 MLGALLNGCMNHGKLDLAETVGR----KLIELEPHQDGRYVGLSNVYAIF---RRWDKAR 366
++NG G++ A+ V + +I D Y+ + N+ A+ RR+ +A+
Sbjct: 384 TYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDS-YIKVQNIDAVLEIRRRFLEAK 442
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 112/238 (47%), Gaps = 12/238 (5%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLM----PEQDVLSWSCLIDGYVRKGDYDEALAVF 130
NL+++ +++ G K G + A +F+ + E D + LIDG RKG+ + A ++
Sbjct: 311 NLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSML 370
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+M G +P+ +T +V+ G + + + V+ + ++ ++L+D Y K
Sbjct: 371 GDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGD-----VITYSTLLDSYIKV 425
Query: 191 GAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
I L + R L P D+ + N ++ F G E+ L+ M + + PD TY
Sbjct: 426 QNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATY 485
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
++ G ++EA F+ L K+ ++ + Y ++D + + G + A + L ++
Sbjct: 486 ATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIEL 542
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWSCLIDGYVRKGDYDEALAVF 130
+++ + +++G K G + A + + V ++++ LI+G ++G EAL +F
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 131 EEMRVSGPKPNEVT---MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+ + G P+EVT ++ LC LD +++ V +P +++ S+VD Y
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLF--LDAEKLLDSMVSKGLVP-NIIIYNSIVDGY 770
Query: 188 AKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
K G ++A+ V +M D F +SMI G+ G ++E+L +F+E + D
Sbjct: 771 CKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADF 830
Query: 246 ITYLNLLSACAHGGLVKEA 264
+L L+ G ++EA
Sbjct: 831 FGFLFLIKGFCTKGRMEEA 849
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 100/223 (44%), Gaps = 10/223 (4%)
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACA--HLGALDKGRMMHHYVIDNELPLT 176
++G ++ A+ V+ MR G VT S + +L +LD ++ + +
Sbjct: 598 KRGSFEAAIEVYMIMRRKGLT---VTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMD 654
Query: 177 LVLRTSLVDMYAKCGAIQEALHV--FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
++ T +++ K G + +AL++ F + +NS+I G G + E+L LF
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
+ +G+ P E+TY L+ GL +A D + G+ P Y +VD + G
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 295 QVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETV 334
Q +A + + + + P A + +++ G G ++ A +V
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSV 817
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 12/173 (6%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFD------LMPEQDVLSWSCLIDGYVRKGDYDEALA 128
N +++NS+++G + G + A ++FD L+P + +++ LID ++G + +A
Sbjct: 689 NTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSE--VTYGILIDNLCKEGLFLDAEK 746
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGAL-DKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+ + M G PN + S++ LG D R++ ++ P + +S++ Y
Sbjct: 747 LLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTV-SSMIKGY 805
Query: 188 AKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
K G ++EAL VF K +D F + +I GF G ++E+ L EM +
Sbjct: 806 CKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLV 858
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 15/304 (4%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKN----LVSWNSMLDGYAKCGDISMA 95
G + D F N LI ++ +A ++ + KN LV +N+++D + K G + A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 96 RQVFDLMPEQ-----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
+++D M + DV++++ LI G+ + +E + VF EM G N VT +++
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS-- 208
D +M+ ++ + + ++ L+D G ++ AL VF +
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
D+ + +MI G V++ DLF + + GVKP+ +TY ++S GL +EA F
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNH 325
+ ++G P S Y ++ R G A + + + ++ AS G L+ ++
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHD 578
Query: 326 GKLD 329
G+LD
Sbjct: 579 GRLD 582
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 170/426 (39%), Gaps = 89/426 (20%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG----------------- 70
L LAI G + K GY NSL++ + I A + D
Sbjct: 128 LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 71 ------------------IPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMP----E 104
+ VK +LV++ ++++G K G+ +A + + M E
Sbjct: 188 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 105 QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL-CACAHLGALDKGRM 163
DV+ ++ +IDG + D+A +F +M G KP+ T ++ C C + D R+
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP---SDVFIWNSMIGGF 220
+ + N P LV +L+D + K G + EA ++ + DV +N++I GF
Sbjct: 308 LSDMLEKNINP-DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 221 ACHGLVKESLDLFSEM----------------------------HIV-------GVKPDE 245
+ V+E +++F EM +V GV PD
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
+TY LL + G V+ A F+ + K M Y M++ + +AG+V + + C
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 306 IP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP-HQDGRYVGLSNVYAIFRR 361
+ ++P +++G G + A+ + ++ E P G Y L + A R
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL--IRARLRD 544
Query: 362 WDKARS 367
D+A S
Sbjct: 545 GDEAAS 550
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 137/312 (43%), Gaps = 45/312 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ FP + F L A A + K +L +++ + G + + + I+ +
Sbjct: 66 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQ 125
Query: 61 IPNARKVFDGIPVK-----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWS 111
+ A + G +K ++V+ NS+L+G+ IS A + D M E D ++++
Sbjct: 126 LSLALAIL-GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
L+ G + EA+A+ E M V G +P+ VT +V+ G D
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD------------ 232
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
L +L++ K G I+ +DV I+N++I G + + ++ D
Sbjct: 233 -------LALNLLNKMEK-GKIE-------------ADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 232 LFSEMHIVGVKPDEITYLNLLSA-CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
LF++M G+KPD TY L+S C +G + D L KN + P + ++D
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN-INPDLVFFNALIDAF 330
Query: 291 ARAGQVAEAYQF 302
+ G++ EA +
Sbjct: 331 VKEGKLVEAEKL 342
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
FPD + + L K + E G+ + +++ G + +LIH + RD NA+
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 67 VF-----DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGY 117
VF DG+ +++++N +LDG G++ A VF+ M ++ D+++++ +I+
Sbjct: 413 VFKQMVSDGVH-PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
+ G ++ +F + + G KPN VT +++
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 19/318 (5%)
Query: 76 LVSWNSMLDGYAKCG-DISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
++S+N++LD + +IS A VF M E +V +++ LI G+ G+ D AL +F
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
++M G PN VT +++ L +D G + + L L+ +++ +
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 191 GAIQEALHVF----RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
G ++E V R G D +N++I G+ G ++L + +EM G+ P I
Sbjct: 289 GRMKEVSFVLTEMNRRGY--SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
TY +L+ + G + A F D + G+ P Y +VD ++ G + EAY+ L ++
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 307 P---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR-- 361
P+ AL+NG GK++ A V + E D V S V + F R
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD--VVSYSTVLSGFCRSY 464
Query: 362 -WDKARSMREAMERMGVK 378
D+A ++ M G+K
Sbjct: 465 DVDEALRVKREMVEKGIK 482
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 151/342 (44%), Gaps = 28/342 (8%)
Query: 57 SFRDIPNARKVF----DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVL 108
S R+I A VF + N+ ++N ++ G+ G+I +A +FD M + +V+
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 241
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
+++ LIDGY + D+ + M + G +PN ++ V+ G +GRM
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN-----GLCREGRMKEVSF 296
Query: 169 IDNEL-----PLTLVLRTSLVDMYAKCGAIQEAL----HVFRSGLMKPSDVFIWNSMIGG 219
+ E+ L V +L+ Y K G +AL + R GL PS V + S+I
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL-TPS-VITYTSLIHS 354
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
G + +++ +M + G+ P+E TY L+ + G + EA+ + NG +P
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGR 336
Y +++ G++ +A L + + P +L+G +D A V R
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 337 KLIELEPHQDG-RYVGLSNVYAIFRRWDKARSMREAMERMGV 377
+++E D Y L + RR +A + E M R+G+
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 148/304 (48%), Gaps = 17/304 (5%)
Query: 36 ITKAGYESDRFVSNSLIHMY---SSFRD--IPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
+ + GY D N+LI Y +F + +A + G+ +++++ S++ K G
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL-TPSVITYTSLIHSMCKAG 359
Query: 91 DISMARQVFDLMPEQDVL----SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
+++ A + D M + + +++ L+DG+ +KG +EA V EM +G P+ VT
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL-- 204
+++ G ++ + + + L +V ++++ + + + EAL V R +
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 205 -MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
+KP D ++S+I GF KE+ DL+ EM VG+ PDE TY L++A G +++
Sbjct: 480 GIKP-DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLN 320
A + + + G+ P Y+ +++ + + + EA + L ++ + P+ L+
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 321 GCMN 324
C N
Sbjct: 599 NCSN 602
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 23/260 (8%)
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRK 120
R++ D ++V++N++++G+ G + A V + M E+ DV+S+S ++ G+ R
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
D DEAL V EM G KP+ +T S++ + ++ ++ LP
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
T+L++ Y G +++AL + + K DV ++ +I G +E+ L ++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 239 VGVKPDEITYLNLLSACAH---------------GGLVKEAWYFFDC-LGKNGMTPKSEH 282
P ++TY L+ C++ G++ EA F+ LGKN P
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH-KPDGTA 642
Query: 283 YACMVDVMARAGQVAEAYQF 302
Y M+ RAG + +AY
Sbjct: 643 YNIMIHGHCRAGDIRKAYTL 662
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 142/329 (43%), Gaps = 45/329 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKA----------GYESDRFVSNSLIHM 54
G+ P+ T+ L G + GY+ +A G+ N+LI+
Sbjct: 375 GLCPNERTYTTLVD----------GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 55 YSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQ----D 106
+ + +A V + + K L VS++++L G+ + D+ A +V M E+ D
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 107 VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH 166
+++S LI G+ + EA ++EEM G P+E T +++ A G L+K +H+
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 167 YVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK---PSDV----FIWN----- 214
+++ + +V + L++ K +EA + + PSDV I N
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 215 -----SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
S+I GF G++ E+ +F M KPD Y ++ G +++A+ +
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAE 298
+ K+G + +V + + G+V E
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 135/293 (46%), Gaps = 13/293 (4%)
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGD----ISMARQVFDLMPEQDVLSWSC 112
+ NA +F+ + +K +++ + +++ G+ G + R + DV+++S
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LID +V++G EA + +EM G P+ VT S++ LDK M ++
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESL 230
+ L++ Y K I + L +FR ++ +D +N++I GF G ++ +
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
+LF EM V+PD ++Y LL G ++A F+ + K+ M Y ++ M
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 291 ARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
A +V +A+ C +P ++P ++ G G L A+ + RK+ E
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 114/240 (47%), Gaps = 10/240 (4%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
+ V++ S++DG+ K + A + DLM + ++ +++ LI+GY + D+ L +F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+M + G + VT +++ LG L+ + + ++ + +V L+D
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 191 GAIQEALHVFRSGLMKPS----DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
G ++AL +F ++ S D+ I+N +I G V ++ DLF + + GVKPD
Sbjct: 471 GEPEKALEIFEK--IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
TY ++ G + EA F + ++G +P Y ++ G ++ + + +I
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 117/266 (43%), Gaps = 9/266 (3%)
Query: 75 NLVSWNSMLDGYAKCGDISMA----RQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
NL + + M++ +C +S+A ++ L E D +++S LI+G +G EAL +
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+ M G KP +T+ +++ G + ++ +++ V ++ + K
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 191 GAIQEALHVFRSGLMKPS--DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
G A+ + R + D ++ +I G G + + +LF+EM I G K D I Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF---LCQ 305
L+ + G + + K +TP ++ ++D + G++ EA + + Q
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLA 331
I P +L++G +LD A
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKA 371
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 127/301 (42%), Gaps = 10/301 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ + PD + F L K +H + + G D SLI +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ A + D + K N+ ++N +++GY K I ++F M + D ++++
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI G+ G + A +F+EM +P+ V+ +L G +K + + ++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESL 230
+ L + + ++ + +A +F S +K DV +N MIGG G + E+
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
LF +M G P+ TY L+ A G ++ + + + G + + +VD++
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Query: 291 A 291
+
Sbjct: 608 S 608
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 22/295 (7%)
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG----ALDKGRMMHHYVIDNELPLTLVL 179
D+A+ +F+EM S P+P + + A LD + M I + L TL +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNL-YTLSI 112
Query: 180 RTSLVDMYAKCGAIQEALHVFRS--GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+++ +C + A L D ++++I G G V E+L+L M
Sbjct: 113 ---MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+G KP IT L++ G V +A D + + G P Y ++ VM ++GQ A
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 298 EAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG--RYVGL 352
A + L ++ I+ A +++G G LD A + ++ E++ + Y L
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTL 288
Query: 353 SNVYAIFRRWDK-ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSE 406
+ RWD A+ +R+ ++R K +P V + FV K + E
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKR---KITP--DVVAFSALIDCFVKEGKLREAEE 338
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 162/386 (41%), Gaps = 56/386 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRE---LGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M R+G+ + T+ L C +R L LA+ G + K GYE +SL++ Y
Sbjct: 111 MQRLGISHNLYTYNILIN---CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 58 FRDIPNARKVFDGIP---------------------------------------VKNLVS 78
+ I +A + D + NLV+
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 79 WNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+ +++G K GDI +A + + M E +V+ +S +ID + D+AL +F EM
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 135 VSGPKPNEVTMVSVL-CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
G +PN +T S++ C C + D R++ +I+ ++ +V +L+D + K G +
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSD-MIERKINPNVVTFNALIDAFVKEGKL 346
Query: 194 QEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
EA ++ + + D+F ++S+I GF H + E+ +F M P+ +TY L
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PI 308
++ + E F + + G+ + Y ++ +A A Q+ +
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 309 QPTASMLGALLNGCMNHGKLDLAETV 334
P LL+G +GKL+ A V
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVV 492
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 174/432 (40%), Gaps = 89/432 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+++G P +T L + +A+ + + GY D +LIH
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSC 112
A + D + + NLV++ +++G K GDI +A + + M E +V+ +S
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL-CACAHLGALDKGRMMHHYVIDN 171
+ID + D+AL +F EM G +PN +T S++ C C + D R++ +I+
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD-MIER 324
Query: 172 ELPLTLVLRTSLVDMYAKCGAI-----------------------------------QEA 196
++ +V +L+D + K G + EA
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 197 LHVFRSGLMKPSDVF----IWNSMIGGFACHGLVKESLDLFSEM---------------- 236
H+F LM D F +N++I GF + E ++LF EM
Sbjct: 385 KHMFE--LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 237 -----------------HIV--GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
+V GV P+ +TY LL G +++A F+ L ++ M
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETV 334
P Y M++ M +AG+V + + C + ++P + +++G G + A+ +
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 335 GRKLIELEPHQD 346
RK+ E P D
Sbjct: 563 FRKMREDGPLPD 574
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
N+LI + + A K++D + + ++ +++S+++G+ + A+ +F+LM
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 105 QD----VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+D V++++ LI+G+ + DE + +F EM G N VT +++ D
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGLMKPSDVFIWNSMI 217
+M+ ++ + + ++ +L+D K G +++A+ VF + M+P+ ++ +N MI
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT-IYTYNIMI 512
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
G G V++ DLF + + GVKPD I Y ++S GL +EA F + ++G
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Query: 278 PKS 280
P S
Sbjct: 573 PDS 575
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 127/257 (49%), Gaps = 10/257 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + P+ +TF L A K ++ + K + D F +SLI+ +
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ A+ +F+ + K N+V++N++++G+ K I ++F M ++ + ++++
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI G+ + D D A VF++M G PN +T ++L G L+K ++ Y+ ++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESL 230
+ T+ +++ K G +++ +F S +K DV I+N+MI GF GL +E+
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 231 DLFSEMHIVGVKPDEIT 247
LF +M G PD T
Sbjct: 561 ALFRKMREDGPLPDSGT 577
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 154/369 (41%), Gaps = 55/369 (14%)
Query: 72 PVKNLVSWNSMLDGYAKCGD----ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
P+ ++ +N +L AK IS+ ++ L ++ +++ LI+ + R+ AL
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGAL-DKGRMMHHYVIDNELPLTLVLRT----- 181
A+ +M G +P+ VT+ S+L H + D ++ V P T+ T
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 182 ----------SLVDMYAKCGAIQEALH--VFRSGLMKPSD-------------------V 210
+LVD + G + V +GL K D V
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
I++++I + ++L+LF+EM GV+P+ ITY +L+S + +A
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 271 LGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ + + P + ++D + G++ EA Y + + I P +L+NG H +
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 328 LDLAETVGRKLIELEPHQDG-----RYVGLSNVYAIFRRWDKARSM-REAMERMGVKKSP 381
LD A + + EL +D Y L N + +R D+ + RE +R V +
Sbjct: 381 LDEA----KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 382 GYSFVEMHG 390
Y+ + +HG
Sbjct: 437 TYTTL-IHG 444
>AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15661092-15662705 FORWARD
Length = 537
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 142/312 (45%), Gaps = 23/312 (7%)
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
+D R+G +A+ + + R G + + + C AL + +++H ++ +
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+ S+++MY+ CG++++AL VF S M ++ W +I FA +G ++++D F
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNS--MPERNLETWCGVIRCFAKNGQGEDAIDTF 270
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMAR 292
S G KPD + + AC G + E F+ + K G+ P EHY +V ++A
Sbjct: 271 SRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAE 330
Query: 293 AGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGR--YV 350
G + EA +F+ ++P + L+N HG L L + + +L+ + +
Sbjct: 331 PGYLDEALRFV--ESMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKA 388
Query: 351 GLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYM 410
GL V + + ++E ++RM K P Y M A D S P + ++YM
Sbjct: 389 GLVPVKS-------SDLVKEKLQRMA--KGPNYGIRYM-------AAGDISRPENRELYM 432
Query: 411 MLGFIVSQMKHI 422
L + M I
Sbjct: 433 ALKSLKEHMIEI 444
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 84/160 (52%), Gaps = 6/160 (3%)
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
+ + + ++ ++NS+++ Y+ CG + A VF+ MPE+++ +W +I + + G ++A
Sbjct: 207 ITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDA 266
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--TSLV 184
+ F + G KP+ + AC LG +++G ++H + E + + SLV
Sbjct: 267 IDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLV 325
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
M A+ G + EAL S M+P +V +W +++ HG
Sbjct: 326 KMLAEPGYLDEALRFVES--MEP-NVDLWETLMNLSRVHG 362
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 164/383 (42%), Gaps = 51/383 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M ++G+ P+ +T+ L K + L+ G + G + + NSLI+ + F D
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 61 IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMAR-------------------- 96
I A + K L V++ S++ GY G I+ A
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 97 ---------------QVFDLMPEQDV----LSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
++F+ M E +V ++++ +I+GY +GD +A +EM G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
P+ + ++ G + ++ + L + T L+ + + G ++EAL
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 198 HVFRSGLMKPSDV--FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
V + + + D+ + +I G H K L EMH G+KPD++ Y +++ A
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASML 315
+ G KEA+ +D + G P Y +++ + +AG V EA + LC +QP +S+
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA-EVLCS-KMQPVSSVP 750
Query: 316 GALLNGC----MNHGKLDLAETV 334
+ GC + G++D+ + V
Sbjct: 751 NQVTYGCFLDILTKGEVDMQKAV 773
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 6/230 (2%)
Query: 80 NSMLDGYAKCGDI----SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
+S+++G K G I ++ ++V D ++ ++ LID + + EA +F+ M
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
G +PN+VT ++ G LD ++D L L++ SL++ + K G I
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 196 ALHVFRSGLMKPSD--VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
A + K + V + S++GG+ G + ++L L+ EM G+ P T+ LLS
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
GL+++A F+ + + + P Y M++ G +++A++FL
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 75 NLVSWNSMLDGYAKCGD----ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
+LV + ++DG K D + +++ D + D + ++ +ID + GD+ EA ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+ M G PNEVT +V+ G +++ ++ + V +D+ K
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 191 GA-IQEALHVFRS---GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
+Q+A+ + + GL+ ++ +N +I GF G ++E+ +L + M GV PD I
Sbjct: 766 EVDMQKAVELHNAILKGLL--ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
TY +++ VK+A ++ + + G+ P Y ++ AG++ +A +
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 144/310 (46%), Gaps = 15/310 (4%)
Query: 36 ITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF-DGIPV---KNLVSWNSMLDGYAKCGD 91
ITK + ++L+H FR A ++F D + V ++ + ++ + D
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 92 ISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+S A+++ M + +++ ++ LIDG +K EA+ + +++ KP+ VT +
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL--- 204
++ + + G M ++ + +SLV+ K G I+EAL++ + +
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
+ P ++F++N++I E+ LF M +G++P+++TY L+ G + A
Sbjct: 363 VSP-NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNG 321
F + G+ Y +++ + G ++ A F+ ++ ++PT +L+ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 322 CMNHGKLDLA 331
+ GK++ A
Sbjct: 482 YCSKGKINKA 491
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEE 132
V + SM+D +K GD A ++DLM + + ++++ +I+G + G +EA + +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID--NELPLTLVLRTSLVDM---- 186
M+ PN+VT C L L KG + ++ N + L+ T+ +M
Sbjct: 743 MQPVSSVPNQVTY-----GC-FLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 187 YAKCGAIQEALHVFRS--GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+ + G I+EA + G D + +MI VK++++L++ M G++PD
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE 281
+ Y L+ C G + +A + + + G+ P ++
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 147/307 (47%), Gaps = 17/307 (5%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGI----PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
N L+H ++ + ++ F + + ++N M+D K GD+ AR +F+ M
Sbjct: 99 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 158
Query: 105 Q----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+ D ++++ +IDG+ + G D+ + FEEM+ +P+ +T +++ G L
Sbjct: 159 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 218
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF----RSGLMKPSDVFIWNSM 216
G + + N L +V ++LVD + K G +Q+A+ + R GL+ P++ + + S+
Sbjct: 219 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV-PNE-YTYTSL 276
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
I G + ++ L +EM VGV+ + +TY L+ +KEA F + G+
Sbjct: 277 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 336
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAET 333
P Y ++ +A + A + L ++ I+P + G + G + K++ A+
Sbjct: 337 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 396
Query: 334 VGRKLIE 340
V ++ E
Sbjct: 397 VMNEMKE 403
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 136/312 (43%), Gaps = 45/312 (14%)
Query: 78 SWNSMLDGYAKCGDISMARQVFDLM----PEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
S N +L +AK G ++ F M V +++ +ID ++GD + A +FEEM
Sbjct: 97 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 156
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
+ G P+ VT S++ +G LD T+ + DM +
Sbjct: 157 KFRGLVPDTVTYNSMIDGFGKVGRLDD---------------TVCFFEEMKDMCCE---- 197
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
DV +N++I F G + L+ + EM G+KP+ ++Y L+
Sbjct: 198 --------------PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 243
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF---LCQIPIQP 310
A G++++A F+ + + G+ P Y ++D + G +++A++ + Q+ ++
Sbjct: 244 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 303
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMRE 370
AL++G + ++ AE + K+ G L++ A+ + KA++M
Sbjct: 304 NVVTYTALIDGLCDAERMKEAEELFGKM-----DTAGVIPNLASYNALIHGFVKAKNMDR 358
Query: 371 AMERMGVKKSPG 382
A+E + K G
Sbjct: 359 ALELLNELKGRG 370
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 134/309 (43%), Gaps = 44/309 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRF-VSNSLIHMYSSFR 59
M RVG+ P+ T+ L A+ K G SD F + N ++ + +
Sbjct: 261 MRRVGLVPNEYTYTSLIDANC----------------KIGNLSDAFRLGNEMLQVGVEW- 303
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLID 115
N+V++ +++DG + A ++F M V+ S++ LI
Sbjct: 304 ---------------NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 348
Query: 116 GYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
G+V+ + D AL + E++ G KP+ + + + L ++ +++ + + + +
Sbjct: 349 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 408
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD----VFIWNSMIGGFACHGLVKESLD 231
++ T+L+D Y K G E LH+ MK D V + +I G + LV +++D
Sbjct: 409 NSLIYTTLMDAYFKSGNPTEGLHLLDE--MKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 466
Query: 232 LFSEM-HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
F+ + + G++ + + ++ V+ A F+ + + G+ P Y ++D
Sbjct: 467 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 526
Query: 291 ARAGQVAEA 299
+ G V EA
Sbjct: 527 FKQGNVLEA 535
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
N + +M+DG K + A +F+ M ++ D +++ L+DG ++G+ EALA+
Sbjct: 480 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 539
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
++M G K + + S++ +H L K R +I + VL S++ + +
Sbjct: 540 DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYEL 599
Query: 191 GAIQEALHVFRSGLMK 206
G I EA+ + +S LMK
Sbjct: 600 GCIDEAVEL-QSYLMK 614
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 149/335 (44%), Gaps = 27/335 (8%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMA 95
G D F LI+ +S ++ A +FD + N++ +N +L G+ + G+I A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 96 RQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+++ D M + + +++ +IDGY + GD EA +F+EM++ G P+ +++
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 152 CAHLGALDKGRMM----HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG---- 203
C L +++ + + P ++ + V + K E L+ G
Sbjct: 742 CCRLNDVERAITIFGTNKKGCASSTAPFNALI--NWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
KP+DV +N MI G ++ + +LF +M + P ITY +LL+ G E
Sbjct: 800 FGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI--------PIQPTASML 315
+ FD G+ P Y+ +++ + G +A + Q+ + + S
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTC 918
Query: 316 GALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYV 350
ALL+G G++++AE V ++ L+ D V
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 26/324 (8%)
Query: 36 ITKAGYESDRFVSNSLIHMYSSFRDIPNARK-----VFDGIPVKNLVSWNSMLDGYAKCG 90
+ + G D F NSLI S + + AR V +G+ N ++ + + GY +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK-PNAFTYGAFISGYIEAS 536
Query: 91 DISMARQVFDLMPEQDVLS----WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
+ + A + M E VL + LI+ Y +KG EA + + M G + T
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF----RS 202
++ +D + + + + L++ ++K G +Q+A +F
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 203 GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
GL +V I+N ++GGF G ++++ +L EM + G+ P+ +TY ++ G +
Sbjct: 657 GL--TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 263 EAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL------CQIPIQPTASMLG 316
EA+ FD + G+ P S Y +VD R V A C P
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP----FN 770
Query: 317 ALLNGCMNHGKLDLAETVGRKLIE 340
AL+N GK +L V +L++
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMD 794
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 122/293 (41%), Gaps = 52/293 (17%)
Query: 61 IPNARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSC 112
+ A+ +FDG+ L+ ++ S+++GY + ++ ++ M +++++ ++
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
++ G GD D A + +EM SG +PN
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPN------------------------------- 451
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS----DVFIWNSMIGGFACHGLVKE 228
+V+ T+L+ + + +A+ V + MK D+F +NS+I G + + E
Sbjct: 452 ----VVIYTTLIKTFLQNSRFGDAMRVLKE--MKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+ EM G+KP+ TY +S A + + + G+ P +++
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 289 VMARAGQVAE---AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+ G+V E AY+ + I A L+NG + K+D AE + R++
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 158/356 (44%), Gaps = 19/356 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+++G P +TF L + L + + GY+ + + N++I +
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 61 IPNARKVF-----DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWS 111
+ NA + DGI ++V++NS++ G G S A ++ M ++ DV +++
Sbjct: 202 VDNALDLLNRMEKDGIG-PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
LID V++G EA +EEM P+ VT ++ LD+ M +++
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVF----RSGLMKPSDVFIWNSMIGGFACHGLVK 227
+V + L++ Y K ++ + +F + G+++ + + +I G+ G +
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR--NTVTYTILIQGYCRAGKLN 378
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
+ ++F M GV P+ ITY LL G +++A + KNGM Y ++
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 288 DVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
M +AG+VA+A+ C + Q P ++ G G A+ + RK+ E
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 116/240 (48%), Gaps = 15/240 (6%)
Query: 103 PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT---MVSVLCACAHLG-AL 158
P + +S L+ + YD + ++E+M++ G N T +++ C C+ L AL
Sbjct: 77 PLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 159 D-KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS--GLMKPSDVFIWNS 215
G+M+ + +E P ++V SL++ + + + +AL++F G+ +V I+N+
Sbjct: 137 SFLGKMIK---LGHE-P-SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 216 MIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNG 275
+I G V +LDL + M G+ PD +TY +L+S G +A C+ K
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 276 MTPKSEHYACMVDVMARAGQVAEAYQF---LCQIPIQPTASMLGALLNGCMNHGKLDLAE 332
+ P + ++D + G+V+EA +F + + + P L+ G + +LD AE
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 45/289 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGY--ITKAGYESDRFVSNSLIHMYSSF 58
M + ++PD F F A AC+ + + A Y + + + D + LI+ +
Sbjct: 247 MTKREIYPD--VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 59 RDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SW 110
+ A ++F + K ++V+++ +++GY K + ++F M ++ V+ ++
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ LI GY R G + A +F M G PN +T +L H G D G++ VI
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL----H-GLCDNGKIEKALVI- 418
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESL 230
L DM ++G+ +D+ +N +I G G V ++
Sbjct: 419 ------------LADMQ-------------KNGM--DADIVTYNIIIRGMCKAGEVADAW 451
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
D++ ++ G+ PD TY ++ GL +EA F + ++G+ P
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 158/353 (44%), Gaps = 13/353 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+++G PD +TF L + E +A+ I G++ + +LI R
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDIS----MARQVFDLMPEQDVLSWSC 112
+ +A ++F+ + N+V++N+++ G + G + R + E +V++++
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LID +V+ G EA ++ M P+ T S++ G LD+ R M + + N
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESL 230
V+ T+L+ + K +++ + +F K ++ + +I G+ G +
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
++F++M PD TY LL G V++A F+ + K M Y ++ M
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Query: 291 ARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+ G+V +A+ C + ++P +++G G + A+++ +K+ E
Sbjct: 444 CKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 125/303 (41%), Gaps = 32/303 (10%)
Query: 34 GYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDIS 93
G + K G+E D SL++ Y + I +A +FD
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD------------------------ 177
Query: 94 MARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACA 153
Q+ + + +V++++ LI + + A+ +F +M +G +PN VT +++
Sbjct: 178 ---QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 154 HLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVF 211
+G + ++ + ++ T+L+D + K G + EA ++ + DVF
Sbjct: 235 EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF 294
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
+ S+I G +GL+ E+ +F M G P+E+ Y L+ V++ F +
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 272 GKNGMTPKSEHYACMVD---VMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKL 328
+ G+ + Y ++ ++ R E + + P LL+G +GK+
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 329 DLA 331
+ A
Sbjct: 415 EKA 417
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 23/244 (9%)
Query: 103 PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCAC---AHLGALD 159
P ++ ++ L+ + YD +++FE+M++ G P +LC C H L
Sbjct: 79 PLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPP-------LLCTCNIVMHCVCLS 131
Query: 160 KGRMMHHYVIDNELPL----TLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFI 212
+ + L LV TSL++ Y I++A+ +F L KP +V
Sbjct: 132 SQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP-NVVT 190
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA-CAHGGLVKEAWYFFDCL 271
+ ++I + + +++LF++M G +P+ +TY L++ C G AW D +
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRD-M 249
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKL 328
K + P + ++D + G++ EA Y + Q+ + P G+L+NG +G L
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 329 DLAE 332
D A
Sbjct: 310 DEAR 313
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 10/277 (3%)
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
+++AL +F M S P P+ + +L A + D ++ + L + +L T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDV--VISLFEQMQILGIPPLLCT 120
Query: 182 SLVDMYAKCGAIQEA-LHVFRSGLMK---PSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ M+ C + Q F +MK D+ + S++ G+ +++++ LF ++
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+G KP+ +TY L+ + A F+ +G NG P Y +V + G+
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 298 EAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD-GRYVGLS 353
+A L + I+P AL++ + GKL A+ + +I++ + D Y L
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHG 390
N ++ D+AR M MER G + +HG
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGI----PVKNLVSWNSMLDGYAKCGDISMARQVFDLM-- 102
+LIH Y + + A ++F+ + + N+V++++++DG+ K G + A Q+F+ M
Sbjct: 516 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 575
Query: 103 ----PEQD--------------VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT 144
P+ D V+++ L+DG+ + +EA + + M + G +PN++
Sbjct: 576 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 635
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
+++ +G LD+ + + + ++ P TL +SL+D Y K A V S +
Sbjct: 636 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL-SKM 694
Query: 205 MKPS---DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
++ S +V I+ MI G G E+ L M G +P+ +TY ++ G +
Sbjct: 695 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 754
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ + +G G+ P Y ++D + G + A+ L
Sbjct: 755 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 796
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 168/423 (39%), Gaps = 93/423 (21%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGL---AIHGYITKAGYESDRFVSNSLIHMYSS 57
M P+ +T+ L CL K++LG ++ + + Y S + + NSL+H Y +
Sbjct: 287 MRATSCLPNVVTYSTLL--CGCLNKKQLGRCKRVLNMMMMEGCYPSPK-IFNSLVHAYCT 343
Query: 58 FRDIPNARKVFDGIP----VKNLVSWNSMLDGYAKCGD--------ISMARQVFDLMPEQ 105
D A K+ + + V +N ++ CGD + +A + + M
Sbjct: 344 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI--CGDKDSLNCDLLDLAEKAYSEMLAA 401
Query: 106 DVLSWSCLIDGYVR----KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
V+ + + R G Y++A +V EM G P+ T VL
Sbjct: 402 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL------------ 449
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
++ +++ L +L + R GL+ +DV+ + M+ F
Sbjct: 450 ---NYLCNASKMELAFLLFEEMK----------------RGGLV--ADVYTYTIMVDSFC 488
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE 281
GL++++ F+EM VG P+ +TY L+ A V A F+ + G P
Sbjct: 489 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 548
Query: 282 HYACMVDVMARAGQVAEAYQF---LC---QIPI-------------QPTASMLGALLNGC 322
Y+ ++D +AGQV +A Q +C +P +P GALL+G
Sbjct: 549 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 608
Query: 323 MNHGKLDLAETVGRKLIE------LEPHQ---DGRYVGLSNVYAIFRRWDKARSMREAME 373
+++ A RKL++ EP+Q D GL V + D+A+ ++ M
Sbjct: 609 CKSHRVEEA----RKLLDAMSMEGCEPNQIVYDALIDGLCKV----GKLDEAQEVKTEMS 660
Query: 374 RMG 376
G
Sbjct: 661 EHG 663
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 199/482 (41%), Gaps = 78/482 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV P+ +TF + + + + + G E + L+ + +
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSC 112
I +A V + K N++ +N+++D + + G ++ A ++ DLM + + +++
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA-CAHLGALDKGRMMHHYVIDN 171
LI GY + G D A + +EM G N+ + SV+C C+HL R + ++ N
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 172 ELP----LTLVL----------------------------RTSLVDMYAKC--GAIQEAL 197
P LT ++ RTS ++ C G + EA
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 198 HVFRSGLMKPS--DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
+ + L + D +N++I G + E+ EM G+KPD TY L+
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTA 312
+ V+EA F+D +NGM P Y+ M+D +A + E +F ++ +QP
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA----------IFRRW 362
+ L+ G+L +A LE +D ++ G+S A I R
Sbjct: 646 VVYNHLIRAYCRSGRLSMA---------LELREDMKHKGISPNSATYTSLIKGMSIISRV 696
Query: 363 DKARSMREAMERMGVKKSPGY--SFVEMHGALHRFVA--------HDKS-HPSSEQIYMM 411
++A+ + E M G++ + + + ++ +G L + V H K+ HP+ +M
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756
Query: 412 LG 413
+G
Sbjct: 757 IG 758
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 124/301 (41%), Gaps = 15/301 (4%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV-------KNLVSWNSMLDGYAKCGDISM 94
E R +S+ LI +Y + D PV + + N +L + +
Sbjct: 185 EIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQK 244
Query: 95 ARQVFDLMPE---QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+ FD++ + DV ++ I+ + + G +EA+ +F +M +G PN VT +V+
Sbjct: 245 CCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDG 304
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSD 209
G D+ M +++ + TL+ + LV + I +A V + K P +
Sbjct: 305 LGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V ++N++I F G + +++++ M G+ TY L+ G A
Sbjct: 365 VIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 424
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHG 326
+ G + ++ ++ A +F+ ++ ++ P +L L++G HG
Sbjct: 425 EMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 484
Query: 327 K 327
K
Sbjct: 485 K 485
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 14/282 (4%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYA 87
I I G DR N+LI + + A D + + L +++ ++ G
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 88 KCGDISMARQVFD------LMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
+ A Q +D ++P DV ++S +IDG + +E F+EM +PN
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLP--DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
V ++ A G L + + + TSL+ + ++EA +F
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Query: 202 SGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
M+ +VF + ++I G+ G + + L EMH V P++ITY ++ A G
Sbjct: 705 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 764
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
V EA + + + G+ P S Y + + G V EA++
Sbjct: 765 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 178 VLRTSLV--DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
+L TSLV + + KC EA V G+ DV+++ + I F G V+E++ LFS+
Sbjct: 231 ILLTSLVRANEFQKCC---EAFDVVCKGV--SPDVYLFTTAINAFCKGGKVEEAVKLFSK 285
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
M GV P+ +T+ ++ G EA+ F + + + GM P Y+ +V + RA +
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 296 VAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLA 331
+ +AY L ++ + P + L++ + G L+ A
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 158/366 (43%), Gaps = 29/366 (7%)
Query: 36 ITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFD-----GIPVKNLVSWNSMLDGYAKCG 90
+ + GY D + LI + + R+IP A +V + G P ++ ++N++++G+ K
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP--DVFAYNALINGFCKMN 172
Query: 91 DISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
I A +V D M + D ++++ +I +G D AL V ++ +P +T
Sbjct: 173 RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYT 232
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
++ A G +D+ + ++ L + +++ K G + A + R+ +K
Sbjct: 233 ILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK 292
Query: 207 --PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
DV +N ++ G +E L ++M P+ +TY L++ G ++EA
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL-------CQIPIQPTASMLGA 317
+ + G+TP + Y ++ R G++ A +FL C I ++L
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 318 LLNGCMNHGKLDLAETVGRKLIEL--EPHQDGRYVGLSNVYAIFRRWDKARSMREAMERM 375
L C N GK D A + KL E+ P+ S A++ DK R++ +E M
Sbjct: 413 L---CKN-GKADQALEIFGKLGEVGCSPNSSSYNTMFS---ALWSSGDKIRALHMILEMM 465
Query: 376 GVKKSP 381
P
Sbjct: 466 SNGIDP 471
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 146/385 (37%), Gaps = 85/385 (22%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R G PD + L K L + + + K G + D F N+LI+ +
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNR 173
Query: 61 IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQD----VLSWSC 112
I +A +V D + K+ V++N M+ G + +A +V + + + V++++
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV------------------------ 148
LI+ + +G DEAL + +EM G KP+ T ++
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 149 -----------LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
L A + G ++G + + + +V + L+ + G I+EA+
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 198 HVFRSGLMKPS----DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
++ + LMK D + ++ +I F G + +++ M G PD + Y +L+
Sbjct: 354 NLLK--LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 254 ACAHGGLVKEAWYFFDCLGK-----------------------------------NGMTP 278
G +A F LG+ NG+ P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 279 KSEHYACMVDVMARAGQVAEAYQFL 303
Y M+ + R G V EA++ L
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELL 496
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 15/250 (6%)
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMA----RQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ++ G+ + L++ N +L+G K G I A R++ ++ P + +S++ LI G
Sbjct: 146 KMIYSGV-IPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSV 204
Query: 121 GDYDEALAVFEEMRVSGPKPNEVT---MVSVLCACAHLGALDKGRMMHHYVIDN---ELP 174
+ D+AL +F M G +PN VT +V LC +G + + + ++D+ P
Sbjct: 205 NNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG--NNNKKLLEEILDSSQANAP 262
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDL 232
L +V+ T L+D K G + +AL V++ K P+D ++N +I G G + +
Sbjct: 263 LDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGF 322
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
+M GV PD TY L+SA G EA + G+ P Y ++ +
Sbjct: 323 MCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCI 382
Query: 293 AGQVAEAYQF 302
G V A +F
Sbjct: 383 HGDVNRANEF 392
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 144/354 (40%), Gaps = 23/354 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G P+ +++ L K + + L + + K G +R N ++H
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 61 IPNARK-----VFDGIPVK---NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV----L 108
I N K + D ++V ++D K G++ A +V+ M +++V +
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK-----GRM 163
++ +I G G+ A +M G P+ T +++ A G D+ G M
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+ V +++ ++++ + + E L + P +V +WN +I G+ +
Sbjct: 362 QNGGVAPDQISYKVIIQGLCI--HGDVNRANEFLLSMLKSSLLP-EVLLWNVVIDGYGRY 418
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
G +L + + M GVKP+ T L+ GG + +AW+ + + + P + Y
Sbjct: 419 GDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTY 478
Query: 284 ACMVDVMARAGQVAEAYQF---LCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
++ G + A+Q + + QP L+ G G+L AE++
Sbjct: 479 NLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 127/269 (47%), Gaps = 16/269 (5%)
Query: 52 IHMYSSFRD--IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
I M S F++ + A +V+ + KN+ V +N ++ G G++ A M ++
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR 329
Query: 106 ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT-MVSVLCACAHLGALDK 160
DV +++ LI ++G +DEA + M+ G P++++ V + C H G +++
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIH-GDVNR 388
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFIWNSMI 217
++ + L ++L ++D Y + G AL V L +KP +V+ N++I
Sbjct: 389 ANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKP-NVYTNNALI 447
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
G+ G + ++ + +EM + PD TY LL A G ++ A+ +D + + G
Sbjct: 448 HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ 507
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQI 306
P Y +V + G++ +A L +I
Sbjct: 508 PDIITYTELVRGLCWKGRLKKAESLLSRI 536