Jatropha Genome Database

JcCA0043881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0043881.10 + phase: 0 
         (314 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38040.2 | Symbols: CAC3 | CAC3; acetyl-CoA carboxylase | chr...   524   e-149
AT2G38040.1 | Symbols: CAC3 | CAC3; acetyl-CoA carboxylase | chr...   524   e-149

>AT2G38040.2 | Symbols: CAC3 | CAC3; acetyl-CoA carboxylase |
           chr2:15917612-15920749 FORWARD
          Length = 769

 Score =  524 bits (1349), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 248/317 (78%), Positives = 275/317 (86%), Gaps = 4/317 (1%)

Query: 1   MASISHSPSAFRGTS---ASDLLRSSSNGVSGIPLRTLGRARFSS-KTKDFAVIAKIRKV 56
           MASISHS  A  G S   ASD LRSSSNGV+G+PL+TLGRA F++ + KD AV ++++K 
Sbjct: 1   MASISHSSLALGGASSASASDYLRSSSNGVNGVPLKTLGRAVFTTIRRKDLAVTSRLKKG 60

Query: 57  KKQEYPWPDNPDPNVAGGVLSHLSPFKPLKEKPKPVTLDFEKPLIGLEKKIIDVRKMANE 116
           KK E+PWP NPDPNV GGVLS+L+ FKPL +  KPVTLDFEKPL+ LEKKI+DVRKMANE
Sbjct: 61  KKFEHPWPANPDPNVKGGVLSYLAEFKPLGDTQKPVTLDFEKPLVELEKKIVDVRKMANE 120

Query: 117 TGLDFTDQIISLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFSITDKFVELHG 176
           TGLDFT+QII+LENKY+QALKDLYTHLTPIQRVNIARHPNRPTFLDH+ +ITDKF+ELHG
Sbjct: 121 TGLDFTEQIITLENKYRQALKDLYTHLTPIQRVNIARHPNRPTFLDHIHNITDKFMELHG 180

Query: 177 DRAGYDDPAIVTGIGTIDGRRYMFMGHQKGRNTKENIMRNFGMPTPHGYRKALRMMYYAD 236
           DRAGYDDPAIVTGIGTIDG+RYMF+GHQKGRNTKENIMRNFGMPTPHGYRKALRMMYYAD
Sbjct: 181 DRAGYDDPAIVTGIGTIDGKRYMFIGHQKGRNTKENIMRNFGMPTPHGYRKALRMMYYAD 240

Query: 237 HHGFPIVTFIDTPGAFADLKSEELGQGEAIAHNLRTMFGLKVPXXXXXXXXXXXXXXXXX 296
           HHGFPIVTFIDTPGA+ADLKSEELGQGEAIA+NLRTMFGLKVP                 
Sbjct: 241 HHGFPIVTFIDTPGAYADLKSEELGQGEAIANNLRTMFGLKVPILSIVIGEGGSGGALAI 300

Query: 297 XCANKLLMLENAVFYVA 313
            CANK+LMLENAVFYVA
Sbjct: 301 GCANKMLMLENAVFYVA 317


>AT2G38040.1 | Symbols: CAC3 | CAC3; acetyl-CoA carboxylase |
           chr2:15917612-15920749 FORWARD
          Length = 769

 Score =  524 bits (1349), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 248/317 (78%), Positives = 275/317 (86%), Gaps = 4/317 (1%)

Query: 1   MASISHSPSAFRGTS---ASDLLRSSSNGVSGIPLRTLGRARFSS-KTKDFAVIAKIRKV 56
           MASISHS  A  G S   ASD LRSSSNGV+G+PL+TLGRA F++ + KD AV ++++K 
Sbjct: 1   MASISHSSLALGGASSASASDYLRSSSNGVNGVPLKTLGRAVFTTIRRKDLAVTSRLKKG 60

Query: 57  KKQEYPWPDNPDPNVAGGVLSHLSPFKPLKEKPKPVTLDFEKPLIGLEKKIIDVRKMANE 116
           KK E+PWP NPDPNV GGVLS+L+ FKPL +  KPVTLDFEKPL+ LEKKI+DVRKMANE
Sbjct: 61  KKFEHPWPANPDPNVKGGVLSYLAEFKPLGDTQKPVTLDFEKPLVELEKKIVDVRKMANE 120

Query: 117 TGLDFTDQIISLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFSITDKFVELHG 176
           TGLDFT+QII+LENKY+QALKDLYTHLTPIQRVNIARHPNRPTFLDH+ +ITDKF+ELHG
Sbjct: 121 TGLDFTEQIITLENKYRQALKDLYTHLTPIQRVNIARHPNRPTFLDHIHNITDKFMELHG 180

Query: 177 DRAGYDDPAIVTGIGTIDGRRYMFMGHQKGRNTKENIMRNFGMPTPHGYRKALRMMYYAD 236
           DRAGYDDPAIVTGIGTIDG+RYMF+GHQKGRNTKENIMRNFGMPTPHGYRKALRMMYYAD
Sbjct: 181 DRAGYDDPAIVTGIGTIDGKRYMFIGHQKGRNTKENIMRNFGMPTPHGYRKALRMMYYAD 240

Query: 237 HHGFPIVTFIDTPGAFADLKSEELGQGEAIAHNLRTMFGLKVPXXXXXXXXXXXXXXXXX 296
           HHGFPIVTFIDTPGA+ADLKSEELGQGEAIA+NLRTMFGLKVP                 
Sbjct: 241 HHGFPIVTFIDTPGAYADLKSEELGQGEAIANNLRTMFGLKVPILSIVIGEGGSGGALAI 300

Query: 297 XCANKLLMLENAVFYVA 313
            CANK+LMLENAVFYVA
Sbjct: 301 GCANKMLMLENAVFYVA 317