Jatropha Genome Database

JcCA0043871.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0043871.20 + phase: 0 /TE
         (1329 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   281   2e-75
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   112   2e-24
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    75   3e-13
ATMG00300.1 | Symbols: ORF145A | hypothetical protein | chrM:896...    74   6e-13
ATMG00710.1 | Symbols: ORF120 | hypothetical protein | chrM:2075...    70   8e-12
AT4G00980.1 | Symbols:  | zinc knuckle (CCHC-type) family protei...    58   4e-08

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  281 bits (719), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 162/489 (33%), Positives = 258/489 (52%), Gaps = 19/489 (3%)

Query: 808  VLMTDGGEPECFEEAMESEHKRNWIEAMQEEMKSLHENKTFEXXXXXXXXXXXXXXWVFR 867
            V +    EP  + EA E      W  AM +E+ ++    T+E              WV++
Sbjct: 78   VCIAKAKEPSTYNEAKEF---LVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134

Query: 868  IKQEEHSSQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGMAASFDLEIEQMD 927
            IK     +  R+KARLV KG+ Q++GIDF E FSPV K+TS++ +L ++A ++  + Q+D
Sbjct: 135  IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194

Query: 928  VKTAFLHGDLEEEIYMEQPEGFIKKGKE----DYVCKLKKSLYGLKQAPRQWYKKFEFVM 983
            +  AFL+GDL+EEIYM+ P G+  +  +    + VC LKKS+YGLKQA RQW+ KF   +
Sbjct: 195  ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254

Query: 984  GKQGYKKTTSDQCVFVKKFSXXXXXXXXXXXXXXXXXGQNSVRINSLKKQLSKSFAMKDL 1043
               G+ ++ SD   F+ K +                   N   ++ LK QL   F ++DL
Sbjct: 255  IGFGFVQSHSDHTYFL-KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313

Query: 1044 GPAKQILGMKITRNRRTKKLWLSQEKYIEKVLQRFKMENSKAVSCPLANHFKLSSKQCPS 1103
            GP K  LG++I R+     + + Q KY   +L    +   K  S P+      S+     
Sbjct: 314  GPLKYFLGLEIARS--AAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH---- 367

Query: 1104 TDGEKEVMEKIPYASAVGSLMYAMVCTRPDIAHSVGVVSRFLSNPGKEHWAAVKWIFRYL 1163
                 + ++   Y   +G LMY  + TR DI+ +V  +S+F   P   H  AV  I  Y+
Sbjct: 368  --SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYI 424

Query: 1164 RGTTKVCLCFGDEKPI-LVGYTDADMAGDVDSRKSTSGYLITFAGGAVSWQSRLQKCVAL 1222
            +GT    L +  +  + L  ++DA      D+R+ST+GY +      +SW+S+ Q+ V+ 
Sbjct: 425  KGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSK 484

Query: 1223 STTEAEFIALTEACKELLWMKKFLNELGIHQER-YLIFCDSQSAIHLGKNSSFHSRSKHI 1281
            S+ EAE+ AL+ A  E++W+ +F  EL +   +  L+FCD+ +AIH+  N+ FH R+KHI
Sbjct: 485  SSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHI 544

Query: 1282 DVRYHWIRD 1290
            +   H +R+
Sbjct: 545  ESDCHSVRE 553


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  112 bits (279), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 11/222 (4%)

Query: 1021 GQNSVRINSLKKQLSKSFAMKDLGPAKQILGMKITRNRRTKKLWLSQEKYIEKVLQRFKM 1080
            G ++  +N L  QLS +F+MKDLGP    LG++I        L+LSQ KY E++L    M
Sbjct: 14   GSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQTKYAEQILNNAGM 71

Query: 1081 ENSKAVSCPLANHFKLSSKQCPSTDGEKEVMEKIPYASAVGSLMYAMVCTRPDIAHSVGV 1140
             + K +S PL    KL+S          +  +   + S VG+L Y +  TRPDI+++V +
Sbjct: 72   LDCKPMSTPLP--LKLNSSV-----STAKYPDPSDFRSIVGALQY-LTLTRPDISYAVNI 123

Query: 1141 VSRFLSNPGKEHWAAVKWIFRYLRGTTKVCLCFGDEKPILV-GYTDADMAGDVDSRKSTS 1199
            V + +  P    +  +K + RY++GT    L       + V  + D+D AG   +R+ST+
Sbjct: 124  VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 183

Query: 1200 GYLITFAGGAVSWQSRLQKCVALSTTEAEFIALTEACKELLW 1241
            G+        +SW ++ Q  V+ S+TE E+ AL     EL W
Sbjct: 184  GFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 75.1 bits (183), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 5/132 (3%)

Query: 790 RRSSRVRQPSTRYSANEYVLMTDGGEPECFEEAMESEHKRNWIEAMQEEMKSLHENKTFE 849
           R  + + + + +YS    +  T   EP+    A++      W +AMQEE+ +L  NKT+ 
Sbjct: 4   RSKAGINKLNPKYSLT--ITTTIKKEPKSVIFALKDP---GWCQAMQEELDALSRNKTWI 58

Query: 850 XXXXXXXXXXXXXXWVFRIKQEEHSSQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSI 909
                         WVF+ K     +  R KARLV KGF+Q +GI F E +SPVV+  +I
Sbjct: 59  LVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 118

Query: 910 RTVLGMAASFDL 921
           RT+L +A   ++
Sbjct: 119 RTILNVAQQLEV 130


>ATMG00300.1 | Symbols: ORF145A | hypothetical protein |
           chrM:89617-90054 REVERSE
          Length = 145

 Score = 73.9 bits (180), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 59/122 (48%), Gaps = 5/122 (4%)

Query: 373 AENFCSTFRNGKWKLTKGSMVIANGKKDPKLYVMHAKLSRDAFNVAED-DSAVELWHKRL 431
            E  CS    G  K+ KG   I  G +   LY++   +     N+AE       LWH RL
Sbjct: 20  VEASCS---EGVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDETRLWHSRL 76

Query: 432 GHMSEKGMTTLVKNNMLSGLDKVHLEKYSDCMAGKQNRVAFKISQPSRMKNVLDLVHSDL 491
            HMS++GM  LVK   L       L+   DC+ GK +RV F   Q +  KN LD VHSDL
Sbjct: 77  AHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHT-TKNPLDYVHSDL 135

Query: 492 CG 493
            G
Sbjct: 136 WG 137


>ATMG00710.1 | Symbols: ORF120 | hypothetical protein |
           chrM:207553-207915 REVERSE
          Length = 120

 Score = 70.5 bits (171), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 44/71 (61%)

Query: 589 MNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSGKDVSYDH 648
           MNRT++E+VR +L    L K F  +A  TAVH+IN+ P   + +  P+ VW     +Y +
Sbjct: 1   MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60

Query: 649 LRVFGCKAFVH 659
           LR FGC A++H
Sbjct: 61  LRRFGCVAYIH 71


>AT4G00980.1 | Symbols:  | zinc knuckle (CCHC-type) family protein |
           chr4:422732-424580 REVERSE
          Length = 488

 Score = 58.2 bits (139), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 112/289 (38%), Gaps = 38/289 (13%)

Query: 7   KMISLNGANYHIWRNKMRDLLMVTKMHL------PVFGSSKP----------ADKTDEEW 50
           K+   +G +Y  W ++M   L   K+        P  GSS+           AD T ++W
Sbjct: 194 KISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNPREITRADATGKKW 253

Query: 51  AFEHEQVCGYIRQFVDDNVYNHICNE-THARTLWDKLEELYASKSGNNQLFYLTKLMNFK 109
             +      ++   + D++Y     +  HA+ LWD+L+ +Y      ++   + K + F+
Sbjct: 254 LRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESKSKRSQVRKYIEFR 313

Query: 110 YQEGTSVADHLSEMQVTIHQLSNMGIKFDDKILGLMVLASLPESWETLKISITNSTLHSG 169
             E   + + +         + + G+  D+      +++  P SW      +        
Sbjct: 314 MVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRGFCTRLMEEEYLP- 372

Query: 170 LSWEFVKNAVLNEEMRRK---------AQNLSSSQSDILLADAKRNNHSRGRSQSRSSNT 220
             W  ++     EE+ R          A   S  +    L    R + S G    R    
Sbjct: 373 -VWMLMERVKAEEELLRNGAKGVTYRPATGSSQMERTPSLGTTHRGSQSVG--WKRKEPE 429

Query: 221 RDKSRGRSNKFANIVCHHCGKKGHIKRYCRKFKSDQEKIKGKAKKEESS 269
           RD+          IVC +CG+KGH+ ++C   KSD E+  GK+ +  SS
Sbjct: 430 RDER-------VIIVCDNCGRKGHLAKHCWGSKSD-ERASGKSNRINSS 470