Jatropha Genome Database
- JcCA0043871.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0043871.10 - phase: 0
(218 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G04700.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 170 6e-43
AT5G04680.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 160 5e-40
AT3G18670.1 | Symbols: | ankyrin repeat family protein | chr3:6... 160 8e-40
AT5G04690.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 155 1e-38
AT5G04730.1 | Symbols: | unknown protein | chr5:1364101-1367303... 147 7e-36
AT3G54070.1 | Symbols: | ankyrin repeat family protein | chr3:2... 122 2e-28
AT5G35810.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 114 5e-26
>AT5G04700.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G04680.1);
Has 868 Blast hits to 744 proteins in 75 species: Archae
- 0; Bacteria - 22; Metazoa - 164; Fungi - 15; Plants -
471; Viruses - 0; Other Eukaryotes - 196 (source: NCBI
BLink). | chr5:1354240-1356754 REVERSE
Length = 669
Score = 170 bits (431), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 122/204 (59%), Gaps = 1/204 (0%)
Query: 15 QEVESIVDPLSKEYTNIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALIITIMF 74
+EVE I + KE N + +IF K HQ L + EKWMK+TA SC++V ALI+T+ F
Sbjct: 465 KEVERIAPEIEKERVNTEEQTPIEIFTKEHQGLRQEAEKWMKDTAMSCSLVAALIVTVTF 524
Query: 75 SAAFAVTVGSNDQETGVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVLTSRYSEVDF 134
+A F V G++D G P + TSVL+FLG+LT+RYS DF
Sbjct: 525 AAVFTVPGGTDDNSKGKPFHLRDRRFIIFIVSDLISCFASCTSVLIFLGILTARYSFDDF 584
Query: 135 LKSLPTKLIIGLSALFLSIATMMAAFCSILMIVLKGELN-LVLPITLLASIPVILFIFLQ 193
L LPTK+I GLS LF+SIA M+ AF S L ++ E +V P L A +P +LF+ LQ
Sbjct: 585 LVFLPTKMIAGLSILFVSIAAMLIAFSSALFTMMGKEGKWIVAPTILFACLPALLFVLLQ 644
Query: 194 FPLLVEIFVSTYGLGVFNRKMKYW 217
+PLL E+ STYG G+F+R MK W
Sbjct: 645 YPLLKEMIFSTYGKGIFDRNMKCW 668
>AT5G04680.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G04700.1);
Has 351 Blast hits to 330 proteins in 31 species: Archae
- 0; Bacteria - 0; Metazoa - 63; Fungi - 2; Plants -
240; Viruses - 0; Other Eukaryotes - 46 (source: NCBI
BLink). | chr5:1346314-1348850 REVERSE
Length = 705
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 122/212 (57%), Gaps = 9/212 (4%)
Query: 15 QEVESIVDPLSKEYTNIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALI----- 69
+EVE I + KE N + +IF K HQ L + EKWMK+TA SC++V ALI
Sbjct: 493 KEVERIAPEIEKERVNTEEQTPIEIFAKEHQGLRQEAEKWMKDTAMSCSLVAALIVMVTF 552
Query: 70 ----ITIMFSAAFAVTVGSNDQETGVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVL 125
IT++F+A F V+ GS+D G P T+V +FLG+L
Sbjct: 553 AALIITVIFAAVFTVSGGSDDNSEGNPFHLYEQRFIIFIVSDLISCFAACTAVPIFLGIL 612
Query: 126 TSRYSEVDFLKSLPTKLIIGLSALFLSIATMMAAFCSILMIVLKGELNLVLPITLLASIP 185
T+RYS DFL +LPTK+I GLS LF+SIA M+ AF +L+ ++ +V P L A +P
Sbjct: 613 TARYSFDDFLVALPTKMITGLSILFVSIAAMLIAFSLVLITMMNKGKWIVAPTILCACLP 672
Query: 186 VILFIFLQFPLLVEIFVSTYGLGVFNRKMKYW 217
+LF+ LQ+PLL E+ STYG G+F+R M W
Sbjct: 673 ALLFVLLQYPLLKEMIFSTYGKGIFDRNMTCW 704
>AT3G18670.1 | Symbols: | ankyrin repeat family protein |
chr3:6424135-6426471 REVERSE
Length = 598
Score = 160 bits (404), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 124/203 (61%), Gaps = 4/203 (1%)
Query: 15 QEVESIVDPLSKEYTNIDGDNANKIFF-KTHQQLVIDGEKWMKETATSCTVVGALIITIM 73
+EVE +V P ++ N+ K F H+ LV GEKWMKETATSCTVV ALI T+M
Sbjct: 394 KEVEKLVQPKHRKMVNLKQKKTPKALFTDQHKDLVEQGEKWMKETATSCTVVAALITTMM 453
Query: 74 FSAAFAVTVGSNDQETGVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVLTSRYSEVD 133
FS+AF V G + G+P++ + S+LMFLG+L SRY E D
Sbjct: 454 FSSAFTVPGGY--RSDGMPLYIHQHRFKIFLISDAISLFTSCMSLLMFLGILKSRYREED 511
Query: 134 FLKSLPTKLIIGLSALFLSIATMMAAFCSILMIVLKGELNLV-LPITLLASIPVILFIFL 192
FL+SLPTKLI+GL ALFLS+ATM+ F LM ++ +++ V LA IP+ +F+ L
Sbjct: 512 FLRSLPTKLIVGLLALFLSMATMIVTFVVTLMTLVGEKISWVSAQFMFLAVIPLGMFVVL 571
Query: 193 QFPLLVEIFVSTYGLGVFNRKMK 215
QFP+L+EIF +TY VF++ +
Sbjct: 572 QFPVLLEIFRATYCPNVFDKPRR 594
>AT5G04690.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G04700.1);
Has 1580 Blast hits to 1190 proteins in 96 species:
Archae - 2; Bacteria - 80; Metazoa - 484; Fungi - 38;
Plants - 415; Viruses - 2; Other Eukaryotes - 559
(source: NCBI BLink). | chr5:1349781-1352525 REVERSE
Length = 625
Score = 155 bits (393), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 120/215 (55%), Gaps = 8/215 (3%)
Query: 8 VTSLLSMQ-------EVESIVDPLSKEYTNIDGDNANKIFFKTHQQLVIDGEKWMKETAT 60
V++ L MQ E+E IV + E N + +IF K H+ + ++ EKWMK+TA
Sbjct: 409 VSATLQMQRELQWFKEMERIVPAIENERVNTENLTPIEIFRKEHEAMRLEAEKWMKDTAM 468
Query: 61 SCTVVGALIITIMFSAAFAVTVGSNDQETGVPIFSQRXXXXXXXXXXXXXXXXXXTSVLM 120
SC++V ALI+T+ F+A F V G++D G P TSVL+
Sbjct: 469 SCSLVAALIVTVTFAAIFTVPGGTDDNSGGRPFHRHERIFVIFIVSDLISCFAACTSVLI 528
Query: 121 FLGVLTSRYSEVDFLKSLPTKLIIGLSALFLSIATMMAAFCSILMIVLKGELNLVLPITL 180
FLG+LT+RY+ DFL SLP +I GLS LF+SIA M+ AF S L + +V P
Sbjct: 529 FLGILTARYAFDDFLFSLPANMIAGLSTLFVSIAAMLVAFSSALFTIFNDPW-IVAPTIF 587
Query: 181 LASIPVILFIFLQFPLLVEIFVSTYGLGVFNRKMK 215
A P +LF+ +Q+PLL E+ STYG +F+R MK
Sbjct: 588 FACFPALLFVMIQYPLLKELIFSTYGKRIFDRNMK 622
>AT5G04730.1 | Symbols: | unknown protein | chr5:1364101-1367303
REVERSE
Length = 603
Score = 147 bits (370), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 114/203 (56%), Gaps = 1/203 (0%)
Query: 15 QEVESIVDPLSKEYTNIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALIITIMF 74
+EVES+V N D +IF H+ L +GE+WMK TAT+C+ V ALI T+ F
Sbjct: 400 KEVESLVSEREVVQKNKDNKTPRQIFEHYHEHLRKEGEEWMKYTATACSFVAALIATVTF 459
Query: 75 SAAFAVTVGSNDQETGVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVLTSRYSEVDF 134
A F V G D +G P+ SVL+FL +LTSRYS DF
Sbjct: 460 QAIFTVP-GGIDGTSGSPLILNDLHFRAFIFTDTLAFFASCISVLIFLSILTSRYSFDDF 518
Query: 135 LKSLPTKLIIGLSALFLSIATMMAAFCSILMIVLKGELNLVLPITLLASIPVILFIFLQF 194
+ SLP K+I+G S LF+SIA+M+ AF + L ++ + LV P+ LAS P +LF+ LQ+
Sbjct: 519 IVSLPRKMILGQSILFISIASMLVAFITSLSASMRHKPALVYPLKPLASFPSLLFLMLQY 578
Query: 195 PLLVEIFVSTYGLGVFNRKMKYW 217
PLL E+ STYG +F R K W
Sbjct: 579 PLLKEMISSTYGKRLFYRDTKNW 601
>AT3G54070.1 | Symbols: | ankyrin repeat family protein |
chr3:20021330-20023603 REVERSE
Length = 574
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 111/202 (54%), Gaps = 8/202 (3%)
Query: 11 LLSMQEVESIVDPLSKEYTNIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALII 70
LL + V+ IV E N G+ A+ IF + H+ L +GE+WMKETAT+C + LI
Sbjct: 357 LLWFKAVKEIVPRSYIETKNTKGELAHDIFTEQHENLRKEGERWMKETATACMLGATLIA 416
Query: 71 TIMFSAAFAVTVGSNDQET-----GVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGVL 125
T++F+AA + G++D G P F +R S+++FL +
Sbjct: 417 TVVFAAAITIPGGNDDSGDKANTLGFPNFRKRLLFDIFTLSDSVALFSSMMSIVIFLSIF 476
Query: 126 TSRYSEVDFLKSLPTKLIIGLSALFLSIATMMAA--FCSILMIVLKGELNLVLPITLLAS 183
TSRY+E DF LPTKL+ GLSALF+SI +M+ A F IL+ V K L+LVL I+ LAS
Sbjct: 477 TSRYAEEDFRYDLPTKLMFGLSALFISIISMILAFTFSMILIRVEKASLSLVL-ISCLAS 535
Query: 184 IPVILFIFLQFPLLVEIFVSTY 205
+ + F +L F L S Y
Sbjct: 536 LTALTFAYLYFHLWFNTLRSVY 557
>AT5G35810.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Ankyrin
(InterPro:IPR002110); BEST Arabidopsis thaliana protein
match is: ankyrin repeat family protein
(TAIR:AT3G54070.1); Has 446 Blast hits to 440 proteins
in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr5:13993428-13994549 REVERSE
Length = 347
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 9/203 (4%)
Query: 10 SLLSMQEVESIVDPLSKEYTNIDGDNANKIFFKTHQQLVIDGEKWMKETATSCTVVGALI 69
+L + V+ IV + + N + A+ +F K H L +GEKWMKETAT+C +V LI
Sbjct: 132 EILWYKAVKEIVPRVYIKTKNKKEEVAHDLFTKEHDNLRKEGEKWMKETATACILVSTLI 191
Query: 70 ITIMFSAAFAVTVGSND-----QETGVPIFSQRXXXXXXXXXXXXXXXXXXTSVLMFLGV 124
T++F+AAF + G ND + G P F + TS+++FL +
Sbjct: 192 ATVVFAAAFTLP-GGNDTSGDIKTLGFPTFRKEFWFEVFIISDSVALLSSVTSIMIFLSI 250
Query: 125 LTSRYSEVDFLKSLPTKLIIGLSALFLSIATMMAAFCSILMIVLKGE--LNLVLPITLLA 182
LTSRY+E F +LPTKL++GL ALF+SI +M+ AF + L+++ E +L+L + +A
Sbjct: 251 LTSRYAEASFQTTLPTKLMLGLLALFVSIISMVLAFTATLILIRDQEPKWSLIL-LVYVA 309
Query: 183 SIPVILFIFLQFPLLVEIFVSTY 205
S + F+ L F L + S Y
Sbjct: 310 SATALSFVVLHFQLWFDTLRSAY 332