Jatropha Genome Database

JcCA0043431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0043431.10 + phase: 0 
         (265 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01290.1 | Symbols:  | ribose-5-phosphate isomerase | chr2:14...   377   e-105
AT1G71100.1 | Symbols: RSW10 | RSW10 (RADIAL SWELLING 10); ribos...   369   e-102
AT3G04790.1 | Symbols:  | ribose 5-phosphate isomerase-related |...   299   1e-81
AT5G44520.1 | Symbols:  | ribose 5-phosphate isomerase-related |...    97   7e-21

>AT2G01290.1 | Symbols:  | ribose-5-phosphate isomerase |
           chr2:149192-149989 REVERSE
          Length = 265

 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/246 (76%), Positives = 216/246 (87%), Gaps = 6/246 (2%)

Query: 19  PYPVILTQDELKKIAAYKAVEHVESGMVIGLGTGSTAKHAVDRIGELLRQGKLKNIIGIP 78
           P P+ LTQDELK+IAAYKAVE VESGMV+GLGTGSTAKHAVDRIGELLRQGKL+NI+GIP
Sbjct: 26  PQPMNLTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIP 85

Query: 79  TSKKTHEQALSVGIPLSDLDSYPIIDLAIDGADEVDPNLNLVKGRGGSLLREKMIEGACK 138
           TSKKT EQALS+GIPLSDLD++P+IDL+IDGADEVDP LNLVKGRGGSLLREKMIEGA K
Sbjct: 86  TSKKTQEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASK 145

Query: 139 KFIVIVDESKLVKYVGGSGLAMPVEIVPFCWKFTAKRLQELFGYAGCVAKLRTNGSNGKE 198
           KF+VIVD+SK+VK++GGS LA+PVEIVPFCWKFTA++L+ L    GC A LR  G  GK 
Sbjct: 146 KFVVIVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRL-GEKGK- 203

Query: 199 NGGEPFVTDNGNYIVDLYLKGNMGDLKAASDAILRLAGVVEHGMFINMATTVVVAGELGV 258
                FVTDNGNYIVD++++ +MGDL A SDAILRL GVVEHGMF++MA+TV++AGELGV
Sbjct: 204 ----AFVTDNGNYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGV 259

Query: 259 TIKNKQ 264
            IKNK 
Sbjct: 260 KIKNKH 265


>AT1G71100.1 | Symbols: RSW10 | RSW10 (RADIAL SWELLING 10);
           ribose-5-phosphate isomerase | chr1:26814726-26815529
           FORWARD
          Length = 267

 Score =  369 bits (946), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/241 (75%), Positives = 213/241 (88%), Gaps = 3/241 (1%)

Query: 24  LTQDELKKIAAYKAVEHVESGMVIGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKT 83
           LTQ+ELKKIAAYKAVE VESGMVIGLGTGSTAKHAV RI ELLR+GKLK+IIGIPTS  T
Sbjct: 27  LTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGIPTSTTT 86

Query: 84  HEQALSVGIPLSDLDSYPIIDLAIDGADEVDPNLNLVKGRGGSLLREKMIEGACKKFIVI 143
           HEQA+S+GIPLSDLDS+P++DL+IDGADEVDP LNLVKGRGGSLLREKMIEGA KKF+VI
Sbjct: 87  HEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGASKKFVVI 146

Query: 144 VDESKLVKYVGGSGLAMPVEIVPFCWKFTAKRLQELFGYAGCVAKLRTN-GSNGKENGGE 202
           VDESKLVKY+GGSGLA+PVE+VPFC  FT  +L+ELF  +GCVAKLR   GSNG+E    
Sbjct: 147 VDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNGEE--AA 204

Query: 203 PFVTDNGNYIVDLYLKGNMGDLKAASDAILRLAGVVEHGMFINMATTVVVAGELGVTIKN 262
           P VTDN NY+VDLYL+ ++GDL+ AS+AILR  GVVEHGMF+ MATT++VAG+ GVT+K+
Sbjct: 205 PAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFGVTVKD 264

Query: 263 K 263
           +
Sbjct: 265 R 265


>AT3G04790.1 | Symbols:  | ribose 5-phosphate isomerase-related |
           chr3:1313365-1314195 FORWARD
          Length = 276

 Score =  299 bits (765), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 153/271 (56%), Positives = 198/271 (73%), Gaps = 14/271 (5%)

Query: 1   MAIPYPHLSME-TGLSP-------LSPYPVILTQDELKKIAAYKAVEHVESGMVIGLGTG 52
           + +  P +++  TG SP       +    V L+QD+LKK+AA KAVE ++ GMV+GLGTG
Sbjct: 12  LTLRTPSIALRSTGSSPRTSVSFSVKAQSVALSQDDLKKLAAEKAVEAIKPGMVLGLGTG 71

Query: 53  STAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQALSVGIPLSDLDSYPIIDLAIDGADE 112
           STA  AVD+IG+LL  G+L +I+GIPTSK+T EQA S+GIPL  LD++P IDLAIDGADE
Sbjct: 72  STAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQARSLGIPLVGLDTHPRIDLAIDGADE 131

Query: 113 VDPNLNLVKGRGGSLLREKMIEGACKKFIVIVDESKLVKYVGGSGLAMPVEIVPFCWKFT 172
           VDPNL+LVKGRGG+LLREKM+E    KFIV+ D++KLV  +GGSGLAMPVE+V FCW F 
Sbjct: 132 VDPNLDLVKGRGGALLREKMVEAVADKFIVVADDTKLVTGLGGSGLAMPVEVVQFCWNFN 191

Query: 173 AKRLQELFGYAGCVAKLRTNGSNGKENGGEPFVTDNGNYIVDLYLKGNMGDLKAASDAIL 232
             RLQ+LF   GC +KLR +G       G+P+VTDN NYI+DLY K  + D  AA+  I 
Sbjct: 192 LIRLQDLFKEFGCESKLRVDGD------GKPYVTDNSNYIIDLYFKTPLKDGFAAAKEIG 245

Query: 233 RLAGVVEHGMFINMATTVVVAGELGVTIKNK 263
           +  GVVEHG+F+ MAT+V++AG+ GV +  K
Sbjct: 246 KFQGVVEHGLFLGMATSVIIAGKNGVEVMTK 276


>AT5G44520.1 | Symbols:  | ribose 5-phosphate isomerase-related |
           chr5:17934610-17936441 REVERSE
          Length = 296

 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 11/231 (4%)

Query: 33  AAYKAVE-HVESGMVIGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQALSVG 91
           AA+  V+ +V+SGM+IGLG+G  +  A+  +G+ L  G L N++G+P S ++  +A   G
Sbjct: 43  AAHHTVDNYVKSGMIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEAAKYG 102

Query: 92  IPLSDLDSYPIIDLAIDGADEVDPN-LNLVKGRGGS------LLREKMIEGACKKFIVIV 144
           IPL        ID A   AD V+ N L  V GR  S      +L++K I     + + ++
Sbjct: 103 IPLEYYRDGVQIDFAFHDADAVEENTLIAVIGRRRSSQEDDYILKQKSIVKVADEAVFMI 162

Query: 145 DESKLVKYVGGSGLAMPVEIVPFCWKFTAKRLQELFGYAGCVAKLRTNGSNGKENGGEPF 204
            E    +Y  G   ++PV +    W   A+ + +L+     V +  +  + G   G  P 
Sbjct: 163 KEE---QYKAGLEGSIPVLVQSLNWLAIAEEIDDLYLGDAEVWRRASVENEGPLGGDFPI 219

Query: 205 VTDNGNYIVDLYLKGNMGDLKAASDAILRLAGVVEHGMFINMATTVVVAGE 255
           VT +G+ I+D+     +  L   + ++ ++ GVV+HG+ I    TVV+A E
Sbjct: 220 VTSDGHNILDVIFTTPIRSLADLATSLDKIDGVVDHGLIIKTRCTVVIAEE 270