Jatropha Genome Database

JcCA0043061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0043061.10 - phase: 0 /partial
         (339 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15490.1 | Symbols:  | UDP-glucose 6-dehydrogenase, putative ...   647   0.0  
AT3G29360.2 | Symbols:  | UDP-glucose 6-dehydrogenase, putative ...   644   0.0  
AT3G29360.1 | Symbols:  | UDP-glucose 6-dehydrogenase, putative ...   644   0.0  
AT5G39320.1 | Symbols:  | UDP-glucose 6-dehydrogenase, putative ...   637   0.0  
AT1G26570.1 | Symbols: UGD1, ATUGD1 | UGD1 (UDP-GLUCOSE DEHYDROG...   624   e-179

>AT5G15490.1 | Symbols:  | UDP-glucose 6-dehydrogenase, putative |
           chr5:5027872-5029314 REVERSE
          Length = 480

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/339 (92%), Positives = 327/339 (96%)

Query: 1   MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISQHRINAWNSDQLPIYEPGLDDVVKR 60
           MVKICCIGAGYVGGPTMAVIALKCPS+EVAVVDIS  RINAWNSDQLPIYEPGLDDVVK+
Sbjct: 1   MVKICCIGAGYVGGPTMAVIALKCPSVEVAVVDISVPRINAWNSDQLPIYEPGLDDVVKQ 60

Query: 61  CRGRNLFFSVDVEKHVSEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSN 120
           CRG+NLFFS DVEKHV EADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVS S+
Sbjct: 61  CRGKNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSVSD 120

Query: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAISDLFNPDRVLIGGRE 180
           KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAI DLF PDRVLIGGRE
Sbjct: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIEDLFMPDRVLIGGRE 180

Query: 181 TPEGQEAIKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240
           T EG  A+KALKD+YA WVPE+RILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT
Sbjct: 181 TTEGFAAVKALKDIYAQWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240

Query: 241 GADVTEVSYAVGKDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPDVAEYWKQVI 300
           GA+V+EVSYAVGKD+RIGPKFLN+SVGFGGSCFQKDILNLVYICECNGLP+VAEYWKQVI
Sbjct: 241 GANVSEVSYAVGKDSRIGPKFLNSSVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300

Query: 301 KINDYQKNRFVNRVVSSMFNTVSNKKIAILGFAFKKDTG 339
           KINDYQK RFVNR+VSSMFNTVSNKKIA+LGFAFKKDTG
Sbjct: 301 KINDYQKTRFVNRIVSSMFNTVSNKKIAVLGFAFKKDTG 339


>AT3G29360.2 | Symbols:  | UDP-glucose 6-dehydrogenase, putative |
           chr3:11267375-11268817 REVERSE
          Length = 480

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/339 (91%), Positives = 327/339 (96%)

Query: 1   MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISQHRINAWNSDQLPIYEPGLDDVVKR 60
           MVKICCIGAGYVGGPTMAVIALKCP +EVAVVDIS  RINAWNSD LPIYEPGLDDVVK+
Sbjct: 1   MVKICCIGAGYVGGPTMAVIALKCPDVEVAVVDISVPRINAWNSDTLPIYEPGLDDVVKQ 60

Query: 61  CRGRNLFFSVDVEKHVSEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSN 120
           CRG+NLFFS DVEKHV EADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVS S+
Sbjct: 61  CRGKNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSVSD 120

Query: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAISDLFNPDRVLIGGRE 180
           KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAI DLFNPDRVLIGGRE
Sbjct: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIKDLFNPDRVLIGGRE 180

Query: 181 TPEGQEAIKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240
           TPEG +A++ LK+VYAHWVPE +I+TTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT
Sbjct: 181 TPEGFKAVQTLKNVYAHWVPEGQIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240

Query: 241 GADVTEVSYAVGKDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPDVAEYWKQVI 300
           GADVT+VSYAVG D+RIGPKFLN+SVGFGGSCFQKDILNLVYICECNGLP+VAEYWKQVI
Sbjct: 241 GADVTQVSYAVGTDSRIGPKFLNSSVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300

Query: 301 KINDYQKNRFVNRVVSSMFNTVSNKKIAILGFAFKKDTG 339
           KINDYQK+RFVNRVVSSMFN+VSNKKIA+LGFAFKKDTG
Sbjct: 301 KINDYQKSRFVNRVVSSMFNSVSNKKIAVLGFAFKKDTG 339


>AT3G29360.1 | Symbols:  | UDP-glucose 6-dehydrogenase, putative |
           chr3:11267375-11268817 REVERSE
          Length = 480

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/339 (91%), Positives = 327/339 (96%)

Query: 1   MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISQHRINAWNSDQLPIYEPGLDDVVKR 60
           MVKICCIGAGYVGGPTMAVIALKCP +EVAVVDIS  RINAWNSD LPIYEPGLDDVVK+
Sbjct: 1   MVKICCIGAGYVGGPTMAVIALKCPDVEVAVVDISVPRINAWNSDTLPIYEPGLDDVVKQ 60

Query: 61  CRGRNLFFSVDVEKHVSEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSN 120
           CRG+NLFFS DVEKHV EADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVS S+
Sbjct: 61  CRGKNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSVSD 120

Query: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAISDLFNPDRVLIGGRE 180
           KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAI DLFNPDRVLIGGRE
Sbjct: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIKDLFNPDRVLIGGRE 180

Query: 181 TPEGQEAIKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240
           TPEG +A++ LK+VYAHWVPE +I+TTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT
Sbjct: 181 TPEGFKAVQTLKNVYAHWVPEGQIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240

Query: 241 GADVTEVSYAVGKDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPDVAEYWKQVI 300
           GADVT+VSYAVG D+RIGPKFLN+SVGFGGSCFQKDILNLVYICECNGLP+VAEYWKQVI
Sbjct: 241 GADVTQVSYAVGTDSRIGPKFLNSSVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300

Query: 301 KINDYQKNRFVNRVVSSMFNTVSNKKIAILGFAFKKDTG 339
           KINDYQK+RFVNRVVSSMFN+VSNKKIA+LGFAFKKDTG
Sbjct: 301 KINDYQKSRFVNRVVSSMFNSVSNKKIAVLGFAFKKDTG 339


>AT5G39320.1 | Symbols:  | UDP-glucose 6-dehydrogenase, putative |
           chr5:15743254-15744696 FORWARD
          Length = 480

 Score =  637 bits (1644), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/339 (90%), Positives = 326/339 (96%)

Query: 1   MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISQHRINAWNSDQLPIYEPGLDDVVKR 60
           MVKICCIGAGYVGGPTMAVIALKCP IEVAVVDIS  RINAWNSDQLPIYEPGLDD+VK+
Sbjct: 1   MVKICCIGAGYVGGPTMAVIALKCPDIEVAVVDISVPRINAWNSDQLPIYEPGLDDIVKQ 60

Query: 61  CRGRNLFFSVDVEKHVSEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSN 120
           CRG+NLFFS DVEKHV EADIVFVSVNTPTKT GLGAGKAADLTYWESAARMIADVS S+
Sbjct: 61  CRGKNLFFSTDVEKHVREADIVFVSVNTPTKTTGLGAGKAADLTYWESAARMIADVSVSD 120

Query: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAISDLFNPDRVLIGGRE 180
           KIVVEKSTVPVKTAEAIEKIL HNSKGIKFQILSNPEFLAEGTAI+DLFNPDRVLIGGRE
Sbjct: 121 KIVVEKSTVPVKTAEAIEKILMHNSKGIKFQILSNPEFLAEGTAIADLFNPDRVLIGGRE 180

Query: 181 TPEGQEAIKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240
           TPEG +A++ LK+VYA+WVPE +I+TTNLWSAELSKLAANAFLAQRISSVNAMSALCE+T
Sbjct: 181 TPEGFKAVQTLKEVYANWVPEGQIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEST 240

Query: 241 GADVTEVSYAVGKDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPDVAEYWKQVI 300
           GADVT+VSYAVG D+RIG KFLNASVGFGGSCFQKDILNLVYIC+CNGLP+VAEYWKQVI
Sbjct: 241 GADVTQVSYAVGTDSRIGSKFLNASVGFGGSCFQKDILNLVYICQCNGLPEVAEYWKQVI 300

Query: 301 KINDYQKNRFVNRVVSSMFNTVSNKKIAILGFAFKKDTG 339
           KINDYQKNRFVNR+VSSMFNTVSNKK+AILGFAFKKDTG
Sbjct: 301 KINDYQKNRFVNRIVSSMFNTVSNKKVAILGFAFKKDTG 339


>AT1G26570.1 | Symbols: UGD1, ATUGD1 | UGD1 (UDP-GLUCOSE
           DEHYDROGENASE 1); NAD or NADH binding / UDP-glucose
           6-dehydrogenase/ binding / catalytic/ coenzyme binding /
           oxidoreductase/ oxidoreductase, acting on the CH-OH
           group of donors, NAD or NADP as acceptor |
           chr1:9182801-9184246 FORWARD
          Length = 481

 Score =  624 bits (1610), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 298/339 (87%), Positives = 323/339 (95%)

Query: 1   MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISQHRINAWNSDQLPIYEPGLDDVVKR 60
           MVKICCIGAGYVGGPTMAV+ALKCP IEV VVDIS+ RINAWNSD+LPIYEPGL+DVVK+
Sbjct: 1   MVKICCIGAGYVGGPTMAVMALKCPEIEVVVVDISEPRINAWNSDRLPIYEPGLEDVVKQ 60

Query: 61  CRGRNLFFSVDVEKHVSEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSN 120
           CRG+NLFFS DVEKHV E+DIVFVSVNTPTKT+GLGAGKAADLTYWESAARMIADVSKS+
Sbjct: 61  CRGKNLFFSTDVEKHVFESDIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSS 120

Query: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAISDLFNPDRVLIGGRE 180
           KIVVEKSTVPV+TAEAIEKILTHNSKGI+FQILSNPEFLAEGTAI DL+NPDRVLIGGR+
Sbjct: 121 KIVVEKSTVPVRTAEAIEKILTHNSKGIEFQILSNPEFLAEGTAIKDLYNPDRVLIGGRD 180

Query: 181 TPEGQEAIKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240
           T  GQ+AIKAL+DVYAHWVP ++I+ TNLWSAELSKLAANAFLAQRISSVNAMSALCEAT
Sbjct: 181 TAAGQKAIKALRDVYAHWVPVEQIICTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240

Query: 241 GADVTEVSYAVGKDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPDVAEYWKQVI 300
           GADVT+V++AVG DTRIGPKFLNASVGFGGSCFQKDILNL+YICECNGLP+ A YWKQV+
Sbjct: 241 GADVTQVAHAVGTDTRIGPKFLNASVGFGGSCFQKDILNLIYICECNGLPEAANYWKQVV 300

Query: 301 KINDYQKNRFVNRVVSSMFNTVSNKKIAILGFAFKKDTG 339
           K+NDYQK RF NRVVSSMFNTVS KKIAILGFAFKKDTG
Sbjct: 301 KVNDYQKIRFANRVVSSMFNTVSGKKIAILGFAFKKDTG 339