Jatropha Genome Database

JcCA0042831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0042831.10 - phase: 0 /pseudo
         (342 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16530.2 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase ...   301   5e-82
AT2G16530.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase ...   296   1e-80
AT1G72590.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase ...   265   3e-71

>AT2G16530.2 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase
           family protein / steroid 5-alpha-reductase family
           protein | chr2:7163276-7165064 REVERSE
          Length = 342

 Score =  301 bits (770), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 152/291 (52%), Positives = 198/291 (68%), Gaps = 7/291 (2%)

Query: 1   MDIRLDWLLRAAWIS----ATLPILIASFPSSRLNSFHQLLLGFSRRGKTMQPSSHFTVP 56
           +++ + WL+R AWI+    + LP++IAS P+S+LNSF +L+L F+ RGK + PSS FT+P
Sbjct: 2   VELEIVWLVRGAWITVWIVSILPLVIASIPTSKLNSFRELVLSFAGRGKILHPSSQFTIP 61

Query: 57  QRFFLHFYLVGVALTTFLLIIIWGYAYKLASLDSGSLDYSTAASQLVGGSQIYSLHVSHF 116
           Q+ F HFY++GV  TT LL   W YA K+A L S     S  AS+L GGS ++S+H S+ 
Sbjct: 62  QKCFAHFYVIGVVWTTLLLAATWMYACKMAPLSSEEFQLSDIASRLAGGSDVFSVHKSNM 121

Query: 117 PTLAYRHKIWISVFLLLLMEMQVLRRLYETVYVLKYSSSARMHIFGYLVGLFFYTVAPLT 176
             + +R K+W +VFLLLLME+ VLRRL E+ YV KYS SARMHI GY  GLFFY  APL+
Sbjct: 122 TPVEHRFKVWRAVFLLLLMEIHVLRRLIESFYVFKYSPSARMHILGYFAGLFFYVTAPLS 181

Query: 177 LCYSCAFEAFNFAAYQMIE--ANVKNQQTVAVDFDWWRLVKPFVKLGWCHWVGAAIFAWG 234
           LC + A E   F   Q+ E  AN K+  T A +F+    + P +KLG   W+G AIF WG
Sbjct: 182 LCSNIAPEVAGFVGNQVAEFIANGKS-HTSAPEFNLLSSISPLMKLGSLQWIGGAIFLWG 240

Query: 235 WLHQLRCHAILGSLREDREQNEEYGIPRGDWFEIVSSPHYLAEMRRYDETL 285
           W+HQ RCHAILGSLRE+  Q +EY IP GDWF +VSSPH+LAE+  Y   L
Sbjct: 241 WIHQRRCHAILGSLRENPSQAKEYIIPYGDWFGMVSSPHFLAEIVLYAGLL 291


>AT2G16530.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase
           family protein / steroid 5-alpha-reductase family
           protein | chr2:7163276-7165064 REVERSE
          Length = 343

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 198/292 (67%), Gaps = 8/292 (2%)

Query: 1   MDIRLDWLLRAAWIS----ATLPILIASFPSSRLNSFHQLLLGFSRRGKTMQPSSH-FTV 55
           +++ + WL+R AWI+    + LP++IAS P+S+LNSF +L+L F+ RGK + PSS  FT+
Sbjct: 2   VELEIVWLVRGAWITVWIVSILPLVIASIPTSKLNSFRELVLSFAGRGKILHPSSQKFTI 61

Query: 56  PQRFFLHFYLVGVALTTFLLIIIWGYAYKLASLDSGSLDYSTAASQLVGGSQIYSLHVSH 115
           PQ+ F HFY++GV  TT LL   W YA K+A L S     S  AS+L GGS ++S+H S+
Sbjct: 62  PQKCFAHFYVIGVVWTTLLLAATWMYACKMAPLSSEEFQLSDIASRLAGGSDVFSVHKSN 121

Query: 116 FPTLAYRHKIWISVFLLLLMEMQVLRRLYETVYVLKYSSSARMHIFGYLVGLFFYTVAPL 175
              + +R K+W +VFLLLLME+ VLRRL E+ YV KYS SARMHI GY  GLFFY  APL
Sbjct: 122 MTPVEHRFKVWRAVFLLLLMEIHVLRRLIESFYVFKYSPSARMHILGYFAGLFFYVTAPL 181

Query: 176 TLCYSCAFEAFNFAAYQMIE--ANVKNQQTVAVDFDWWRLVKPFVKLGWCHWVGAAIFAW 233
           +LC + A E   F   Q+ E  AN K+  T A +F+    + P +KLG   W+G AIF W
Sbjct: 182 SLCSNIAPEVAGFVGNQVAEFIANGKS-HTSAPEFNLLSSISPLMKLGSLQWIGGAIFLW 240

Query: 234 GWLHQLRCHAILGSLREDREQNEEYGIPRGDWFEIVSSPHYLAEMRRYDETL 285
           GW+HQ RCHAILGSLRE+  Q +EY IP GDWF +VSSPH+LAE+  Y   L
Sbjct: 241 GWIHQRRCHAILGSLRENPSQAKEYIIPYGDWFGMVSSPHFLAEIVLYAGLL 292


>AT1G72590.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase
           family protein / steroid 5-alpha-reductase family
           protein | chr1:27335601-27336989 FORWARD
          Length = 320

 Score =  265 bits (677), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 141/286 (49%), Positives = 189/286 (66%), Gaps = 26/286 (9%)

Query: 1   MDIRLDWLLRAAWIS----ATLPILIASFPSSRLNSFHQLLLGFSRRGKTMQPSSH-FTV 55
           M++ + WL++AAWI+    + LP++IAS PSS+LNSF +L+L F+ RGK + PSS  FTV
Sbjct: 1   MEVEIVWLVKAAWITVWIVSILPLVIASIPSSKLNSFRELVLSFAGRGKILHPSSQKFTV 60

Query: 56  PQRFFLHFYLVGVALTTFLLIIIWGYAYKLASLDSGSLDYSTAASQLVGGSQIYSLHVSH 115
           PQ+FF HFY+VGV  TT LL   W YA K+A                 GGS ++S H++H
Sbjct: 61  PQKFFGHFYVVGVVWTTLLLAATWMYACKMA-----------------GGSHVFSFHMTH 103

Query: 116 FPTLAYRHKIWISVFLLLLMEMQVLRRLYETVYVLKYSSSARMHIFGYLVGLFFYTVAPL 175
              + +R K+  +VFLLLLME+ VLRR+ E+ YV KYS+SARMHI  Y+  LF+Y  APL
Sbjct: 104 ---VEHRFKVGRAVFLLLLMEIHVLRRVIESFYVFKYSTSARMHILAYVGALFYYVAAPL 160

Query: 176 TLCYSCAFEAFNFAAYQMIEANVKNQQTVAVDFDWWRLVKPFVKLGWCHWVGAAIFAWGW 235
           +LC + A E   F   Q+ E  + + ++ + DF+    + P +KLG   W+G AIF WGW
Sbjct: 161 SLCSNIAPEVARFVGSQVAE-FIASGKSHSHDFNLLLSISPLMKLGSLQWIGGAIFLWGW 219

Query: 236 LHQLRCHAILGSLREDREQNEEYGIPRGDWFEIVSSPHYLAEMRRY 281
           +HQ RCHAILGSLRE   Q +EY IP GDWFE+VS PH+LAE+  Y
Sbjct: 220 IHQRRCHAILGSLREYPSQAKEYIIPYGDWFEMVSCPHFLAEIVLY 265