Jatropha Genome Database

JcCA0029581.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029581.30 - phase: 2 /partial
         (60 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08320.2 | Symbols:  | bZIP family transcription factor | chr...   111   1e-25
AT1G08320.3 | Symbols:  | bZIP family transcription factor | chr...   110   2e-25
AT1G08320.1 | Symbols:  | bZIP family transcription factor | chr...   110   2e-25
AT1G22070.1 | Symbols: TGA3 | TGA3; DNA binding / calmodulin bin...    55   9e-09
AT1G68640.1 | Symbols: PAN | PAN (PERIANTHIA); DNA binding / tra...    52   1e-07
AT1G77920.1 | Symbols:  | bZIP family transcription factor | chr...    51   2e-07
AT5G06839.1 | Symbols:  | bZIP family transcription factor | chr...    50   4e-07
AT5G06839.2 | Symbols:  | bZIP family transcription factor | chr...    50   4e-07
AT5G06950.4 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding / tr...    49   4e-07
AT5G06950.3 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding / tr...    49   4e-07
AT5G06950.2 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding / tr...    49   4e-07
AT5G06950.1 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding / tr...    49   4e-07
AT5G65210.5 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    48   1e-06
AT5G65210.4 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    48   1e-06
AT5G65210.3 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    48   1e-06
AT5G65210.1 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    48   1e-06
AT5G65210.2 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    48   1e-06
AT5G10030.1 | Symbols: TGA4, OBF4 | TGA4 (TGACG MOTIF-BINDING FA...    48   1e-06
AT3G12250.2 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING ...    48   1e-06
AT3G12250.1 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING ...    48   1e-06
AT3G12250.3 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING ...    48   1e-06
AT5G65210.6 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    48   1e-06
AT3G12250.5 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING ...    48   1e-06
AT3G12250.4 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING ...    47   2e-06

>AT1G08320.2 | Symbols:  | bZIP family transcription factor |
           chr1:2622113-2625725 REVERSE
          Length = 357

 Score =  111 bits (277), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 49/60 (81%), Positives = 55/60 (91%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRESMMGDENSCQTTSDLQMVQPPQNHFTNF 60
           TVRQAARCFLVIGEYYGRLRALSSLW SRPRE++M DE SCQTT+DLQ+VQ  +NHF+NF
Sbjct: 298 TVRQAARCFLVIGEYYGRLRALSSLWLSRPRETLMSDETSCQTTTDLQIVQSSRNHFSNF 357


>AT1G08320.3 | Symbols:  | bZIP family transcription factor |
           chr1:2622113-2627451 REVERSE
          Length = 481

 Score =  110 bits (275), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 49/60 (81%), Positives = 55/60 (91%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRESMMGDENSCQTTSDLQMVQPPQNHFTNF 60
           TVRQAARCFLVIGEYYGRLRALSSLW SRPRE++M DE SCQTT+DLQ+VQ  +NHF+NF
Sbjct: 422 TVRQAARCFLVIGEYYGRLRALSSLWLSRPRETLMSDETSCQTTTDLQIVQSSRNHFSNF 481


>AT1G08320.1 | Symbols:  | bZIP family transcription factor |
           chr1:2622113-2627451 REVERSE
          Length = 481

 Score =  110 bits (275), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 49/60 (81%), Positives = 55/60 (91%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRESMMGDENSCQTTSDLQMVQPPQNHFTNF 60
           TVRQAARCFLVIGEYYGRLRALSSLW SRPRE++M DE SCQTT+DLQ+VQ  +NHF+NF
Sbjct: 422 TVRQAARCFLVIGEYYGRLRALSSLWLSRPRETLMSDETSCQTTTDLQIVQSSRNHFSNF 481


>AT1G22070.1 | Symbols: TGA3 | TGA3; DNA binding / calmodulin
           binding / protein binding / transcription factor |
           chr1:7789651-7791821 FORWARD
          Length = 384

 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAAR  L +GEY+ RLRALSSLWA+RPRE
Sbjct: 351 TTRQAARGLLALGEYFHRLRALSSLWAARPRE 382


>AT1G68640.1 | Symbols: PAN | PAN (PERIANTHIA); DNA binding /
           transcription factor | chr1:25769739-25772303 REVERSE
          Length = 452

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 26/32 (81%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAAR FLVI +Y  RLRALSSLW +RPR+
Sbjct: 421 TTRQAARAFLVIHDYISRLRALSSLWLARPRD 452


>AT1G77920.1 | Symbols:  | bZIP family transcription factor |
           chr1:29298959-29300607 FORWARD
          Length = 368

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 26/32 (81%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L +GEY  RLRALSSLWA+RP+E
Sbjct: 335 TTRQSARGLLALGEYLHRLRALSSLWAARPQE 366


>AT5G06839.1 | Symbols:  | bZIP family transcription factor |
           chr5:2120911-2126217 FORWARD
          Length = 417

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ ARC L + EY+ RL+ALSSLW +RPR+
Sbjct: 384 TTRQEARCLLAVAEYFHRLQALSSLWLARPRQ 415


>AT5G06839.2 | Symbols:  | bZIP family transcription factor |
           chr5:2120911-2126217 FORWARD
          Length = 418

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ ARC L + EY+ RL+ALSSLW +RPR+
Sbjct: 385 TTRQEARCLLAVAEYFHRLQALSSLWLARPRQ 416


>AT5G06950.4 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding /
           transcription activator/ transcription factor/
           transcription repressor | chr5:2152323-2154174 FORWARD
          Length = 330

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y+ RLRALSSLW +RPRE
Sbjct: 299 TTRQSARALLAIHDYFSRLRALSSLWLARPRE 330


>AT5G06950.3 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding /
           transcription activator/ transcription factor/
           transcription repressor | chr5:2152323-2154174 FORWARD
          Length = 330

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y+ RLRALSSLW +RPRE
Sbjct: 299 TTRQSARALLAIHDYFSRLRALSSLWLARPRE 330


>AT5G06950.2 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding /
           transcription activator/ transcription factor/
           transcription repressor | chr5:2152323-2154174 FORWARD
          Length = 330

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y+ RLRALSSLW +RPRE
Sbjct: 299 TTRQSARALLAIHDYFSRLRALSSLWLARPRE 330


>AT5G06950.1 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding /
           transcription activator/ transcription factor/
           transcription repressor | chr5:2152323-2154174 FORWARD
          Length = 330

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y+ RLRALSSLW +RPRE
Sbjct: 299 TTRQSARALLAIHDYFSRLRALSSLWLARPRE 330


>AT5G65210.5 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059031-26060749
           FORWARD
          Length = 368

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAAR  L +GEY+ RLRALSS WA+R RE
Sbjct: 335 TTRQAARGLLALGEYFQRLRALSSSWATRHRE 366


>AT5G65210.4 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059031-26060749
           FORWARD
          Length = 368

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAAR  L +GEY+ RLRALSS WA+R RE
Sbjct: 335 TTRQAARGLLALGEYFQRLRALSSSWATRHRE 366


>AT5G65210.3 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059031-26060749
           FORWARD
          Length = 368

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAAR  L +GEY+ RLRALSS WA+R RE
Sbjct: 335 TTRQAARGLLALGEYFQRLRALSSSWATRHRE 366


>AT5G65210.1 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059031-26060749
           FORWARD
          Length = 368

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAAR  L +GEY+ RLRALSS WA+R RE
Sbjct: 335 TTRQAARGLLALGEYFQRLRALSSSWATRHRE 366


>AT5G65210.2 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059031-26060749
           FORWARD
          Length = 368

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAAR  L +GEY+ RLRALSS WA+R RE
Sbjct: 335 TTRQAARGLLALGEYFQRLRALSSSWATRHRE 366


>AT5G10030.1 | Symbols: TGA4, OBF4 | TGA4 (TGACG MOTIF-BINDING
           FACTOR 4); DNA binding / calmodulin binding /
           transcription factor | chr5:3137648-3139295 REVERSE
          Length = 364

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAAR  L +GEY+ RLRALSS WA+R RE
Sbjct: 331 TTRQAARGLLALGEYFQRLRALSSSWAARQRE 362


>AT3G12250.2 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING
           FACTOR 6); DNA binding / transcription factor |
           chr3:3906351-3908583 FORWARD
          Length = 330

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 24/32 (75%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y  RLRALSSLW +RPRE
Sbjct: 299 TTRQSARALLAIHDYSSRLRALSSLWLARPRE 330


>AT3G12250.1 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING
           FACTOR 6); DNA binding / transcription factor |
           chr3:3906351-3908583 FORWARD
          Length = 330

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 24/32 (75%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y  RLRALSSLW +RPRE
Sbjct: 299 TTRQSARALLAIHDYSSRLRALSSLWLARPRE 330


>AT3G12250.3 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING
           FACTOR 6); DNA binding / transcription factor |
           chr3:3906573-3908583 FORWARD
          Length = 324

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 24/32 (75%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y  RLRALSSLW +RPRE
Sbjct: 293 TTRQSARALLAIHDYSSRLRALSSLWLARPRE 324


>AT5G65210.6 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059353-26060749
           FORWARD
          Length = 298

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAAR  L +GEY+ RLRALSS WA+R RE
Sbjct: 265 TTRQAARGLLALGEYFQRLRALSSSWATRHRE 296


>AT3G12250.5 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING
           FACTOR 6); DNA binding / transcription factor |
           chr3:3906636-3908583 FORWARD
          Length = 303

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 24/32 (75%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y  RLRALSSLW +RPRE
Sbjct: 272 TTRQSARALLAIHDYSSRLRALSSLWLARPRE 303


>AT3G12250.4 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING
           FACTOR 6); DNA binding / transcription factor |
           chr3:3906351-3908583 FORWARD
          Length = 355

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 24/32 (75%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y  RLRALSSLW +RPRE
Sbjct: 324 TTRQSARALLAIHDYSSRLRALSSLWLARPRE 355