Jatropha Genome Database
- JcCA0029371.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0029371.20 + phase: 0 /TE
(424 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G58230.1 | Symbols: MSI1, MEE70, ATMSI1 | MSI1 (MULTICOPY SUP... 793 0.0
AT2G16780.1 | Symbols: MSI2, MSI02, NFC02, NFC2 | MSI2 (MULTICOP... 447 e-126
AT4G35050.1 | Symbols: MSI3, NFC3 | MSI3 (MULTICOPY SUPPRESSOR O... 434 e-122
AT2G19520.1 | Symbols: FVE, ACG1, MSI4, NFC4, NFC04, ATMSI4 | FV... 216 3e-56
AT4G29730.1 | Symbols: NFC5, MSI5 | NFC5 (Nucleosome/chromatin a... 189 3e-48
AT2G19540.1 | Symbols: | transducin family protein / WD-40 repe... 123 3e-28
AT1G29260.1 | Symbols: PEX7, ATPEX7 | PEX7; peroxisome matrix ta... 89 6e-18
AT5G67320.1 | Symbols: HOS15 | HOS15 (high expression of osmotic... 80 2e-15
AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 | COP1... 75 6e-14
AT3G63460.2 | Symbols: | WD-40 repeat family protein | chr3:234... 70 2e-12
AT3G63460.1 | Symbols: | WD-40 repeat family protein | chr3:234... 70 2e-12
AT1G18830.1 | Symbols: | transducin family protein / WD-40 repe... 68 1e-11
AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 3e-11
AT1G52360.1 | Symbols: | coatomer protein complex, subunit beta... 65 8e-11
AT1G11160.1 | Symbols: | nucleotide binding | chr1:3733406-3739... 65 1e-10
AT4G18900.1 | Symbols: | transducin family protein / WD-40 repe... 63 3e-10
AT3G15980.3 | Symbols: | coatomer protein complex, subunit beta... 63 3e-10
AT3G15980.2 | Symbols: | coatomer protein complex, subunit beta... 63 3e-10
AT3G15980.1 | Symbols: | coatomer protein complex, subunit beta... 63 4e-10
AT5G23430.1 | Symbols: | transducin family protein / WD-40 repe... 62 8e-10
AT1G79990.3 | Symbols: | protein binding / structural molecule ... 62 8e-10
AT5G23430.2 | Symbols: | transducin family protein / WD-40 repe... 62 8e-10
AT1G79990.5 | Symbols: | protein binding / structural molecule ... 62 9e-10
AT1G79990.1 | Symbols: | protein binding / structural molecule ... 62 9e-10
AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin ... 61 1e-09
AT3G49660.1 | Symbols: | transducin family protein / WD-40 repe... 61 2e-09
AT4G35370.1 | Symbols: | nucleotide binding | chr4:16815138-168... 60 2e-09
AT4G18905.1 | Symbols: | transducin family protein / WD-40 repe... 59 5e-09
AT5G25150.1 | Symbols: TAF5 | TAF5 (TBP-ASSOCIATED FACTOR 5); nu... 59 7e-09
AT5G13480.1 | Symbols: FY | FY; protein binding | chr5:4326638-4... 59 7e-09
AT2G43770.1 | Symbols: | transducin family protein / WD-40 repe... 57 2e-08
AT2G21390.1 | Symbols: | coatomer protein complex, subunit alph... 57 3e-08
AT4G02730.1 | Symbols: | transducin family protein / WD-40 repe... 55 8e-08
AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide bindin... 54 2e-07
AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS... 54 2e-07
AT3G16650.1 | Symbols: | PP1/PP2A phosphatases pleiotropic regu... 54 3e-07
AT5G05970.1 | Symbols: NEDD1 | NEDD1 (NEURAL PRECURSOR CELL EXPR... 52 6e-07
AT2G32700.6 | Symbols: LUH | WD-40 repeat family protein | chr2:... 52 6e-07
AT5G05970.2 | Symbols: NEDD1 | NEDD1 (NEURAL PRECURSOR CELL EXPR... 52 6e-07
AT2G32700.2 | Symbols: LUH | WD-40 repeat family protein | chr2:... 52 6e-07
AT2G32700.1 | Symbols: LUH | WD-40 repeat family protein | chr2:... 52 6e-07
AT2G32700.4 | Symbols: LUH | WD-40 repeat family protein | chr2:... 52 6e-07
AT2G32700.5 | Symbols: LUH | WD-40 repeat family protein | chr2:... 52 6e-07
AT2G32700.3 | Symbols: LUH | WD-40 repeat family protein | chr2:... 52 6e-07
AT2G26060.2 | Symbols: emb1345 | emb1345 (embryo defective 1345)... 52 6e-07
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 52 7e-07
AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE); nucle... 52 1e-06
AT4G32990.1 | Symbols: | nucleotide binding | chr4:15920230-159... 50 2e-06
AT5G63010.1 | Symbols: | WD-40 repeat family protein | chr5:252... 50 3e-06
AT1G76260.1 | Symbols: | transducin family protein / WD-40 repe... 49 5e-06
AT1G49040.1 | Symbols: SCD1 | SCD1 (STOMATAL CYTOKINESIS-DEFECTI... 49 7e-06
AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING PR... 49 7e-06
AT4G11110.1 | Symbols: SPA2 | SPA2 (SPA1-RELATED 2); protein bin... 49 7e-06
AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING PR... 49 7e-06
AT2G26060.1 | Symbols: emb1345 | emb1345 (embryo defective 1345)... 49 8e-06
AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING PR... 49 8e-06
AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING PR... 48 9e-06
>AT5G58230.1 | Symbols: MSI1, MEE70, ATMSI1 | MSI1 (MULTICOPY
SUPRESSOR OF IRA1); protein binding |
chr5:23556112-23557994 FORWARD
Length = 424
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/424 (88%), Positives = 395/424 (93%)
Query: 1 MGKDXXXXXXXXXXRLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD 60
MGKD RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEP GKD
Sbjct: 1 MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKD 60
Query: 61 YSNQKMILGTHTSENEPNYLMLAQVQLPLGDAENDARHYDDDRSDFGGFGAANGKVQIIQ 120
YS QKMILGTHTSE+EPNYLMLAQVQLPL D E++AR YDDDRS+FGGFG A GKVQIIQ
Sbjct: 61 YSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQ 120
Query: 121 QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTE 180
QINHDGEVNRARYMPQNPFIIATKTV+AEVYVFDYSKHPSKPPLDG CNPDL+LRGHS+E
Sbjct: 121 QINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSE 180
Query: 181 GYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHE 240
GYGLSWSKFKQGHLLSGSDDAQICLWDI++TPKN++LDA Q FK HEGVVEDVAWHLRHE
Sbjct: 181 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHE 240
Query: 241 YLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL 300
YLFGSVGDDQYLLIWDLR+P+ +KPVQSVVAH EVNCLAFNPFNEWVVATGSTDKTVKL
Sbjct: 241 YLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKL 300
Query: 301 FDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE 360
FD+RK++TALHTFD HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT EDAE
Sbjct: 301 FDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAE 360
Query: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDMPGDES 420
DGPPELLFIHGGHTSKISDFSWNPCEDWVI+SVAEDNILQIWQMAENIYHDEDD PG+E
Sbjct: 361 DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDAPGEEP 420
Query: 421 TKGS 424
+K S
Sbjct: 421 SKAS 424
>AT2G16780.1 | Symbols: MSI2, MSI02, NFC02, NFC2 | MSI2 (MULTICOPY
SUPPRESSOR OF IRA1 2) | chr2:7281615-7283583 REVERSE
Length = 415
Score = 447 bits (1149), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/407 (55%), Positives = 284/407 (69%), Gaps = 26/407 (6%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSNQKMILGTHTSE 74
+ E++ +WKKNTPFLYDL+I+H LEWPSLTV W+P P D + K+ILGTHTS
Sbjct: 14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSG 73
Query: 75 NEPNYLMLAQVQLPLGDAENDARHYDDDRSDFGGFGAANG-----KVQIIQQINHDGEVN 129
+ ++LM+A V P +AE G G AN KV+I Q+I DGEVN
Sbjct: 74 SAQDFLMVADVVTPTPNAEP-------------GIGGANQDPFIPKVEIRQRIRVDGEVN 120
Query: 130 RARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTEGYGLSWSKF 189
RAR MPQ P ++ KT EV++FDY+KH +K C+PDLRL GH EGYGLSWS F
Sbjct: 121 RARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQT-SECDPDLRLVGHDKEGYGLSWSPF 179
Query: 190 KQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDD 249
K+G+LLSGS D +ICLWD+ +TP+++ L+AM ++ HE + DV+WH+++E LFGS G+D
Sbjct: 180 KEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGED 239
Query: 250 QYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTA 309
L+IWD RT + V+ H+ EVN L+FNPFNEWV+AT S+D TV LFD+RK+N
Sbjct: 240 GRLVIWDTRTNQMQHQVK---VHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAP 296
Query: 310 LHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ--TPEDAEDGPPELL 367
LH H+ EVFQV W+P +ET+LAS RRLMVWDL+R+ EEQ DAEDGPPELL
Sbjct: 297 LHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELL 356
Query: 368 FIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDD 414
F HGGH +KISDF+WN E WVIASVAEDN LQ+WQMAE+IY DE+D
Sbjct: 357 FSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEED 403
>AT4G35050.1 | Symbols: MSI3, NFC3 | MSI3 (MULTICOPY SUPPRESSOR OF
IRA1 3); protein binding | chr4:16682752-16684751
REVERSE
Length = 424
Score = 434 bits (1115), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/397 (53%), Positives = 279/397 (70%), Gaps = 16/397 (4%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSNQKMILGTHTSE 74
+ EE+ IWK+NTPFLYDL+I+H LEWPSLT+ W+P P KD ++ K+ILGTHTS
Sbjct: 15 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSG 74
Query: 75 NEPNYLMLAQVQLPLGDAENDARHYDDDRSDFGGFGAANGKVQIIQQINHDGEVNRARYM 134
++LM+A V +P DAE D + KV+I Q+I DGEVNRAR M
Sbjct: 75 GAQDFLMVADVVIPTPDAEPGLGGRDQE--------PIVPKVEIKQKIRVDGEVNRARCM 126
Query: 135 PQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTEGYGLSWSKFKQGHL 194
PQ P ++ KT +EV++FDY++ KP C+PDLRL GH EGYGL+WS FK+G+L
Sbjct: 127 PQKPTLVGAKTSGSEVFLFDYARLSGKPQT-SECDPDLRLMGHEQEGYGLAWSSFKEGYL 185
Query: 195 LSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254
LSGS D +ICLWD+ +T ++ L+ M ++ H+ ++EDVAWH+++E +FGS GDD L+I
Sbjct: 186 LSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVI 245
Query: 255 WDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFD 314
WDLRT + V+ H+ E+N L+FNPFNEWV+AT S+D TV LFD+RK+ LH
Sbjct: 246 WDLRTNQMQHQVK---VHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLS 302
Query: 315 CHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ--TPEDAEDGPPELLFIHGG 372
H+ EVFQV W+P +ET+LAS RRLMVWD++R+ +EQ DAEDGPPELLF HGG
Sbjct: 303 KHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGG 362
Query: 373 HTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIY 409
H +KISDF+WN E WVI+SVAEDN LQ+WQMAE+IY
Sbjct: 363 HKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIY 399
>AT2G19520.1 | Symbols: FVE, ACG1, MSI4, NFC4, NFC04, ATMSI4 | FVE;
metal ion binding | chr2:8456006-8459235 FORWARD
Length = 507
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/442 (33%), Positives = 220/442 (49%), Gaps = 59/442 (13%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSNQKMILGTHTSENE 76
++E+Y WK P LYD + H L WPSL+ W P E+ K+ Q++ L T +
Sbjct: 64 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTDGSV 121
Query: 77 PNYLMLAQ---VQLPLGDAENDARHYDDDRSDFGGFGAANGKVQIIQQINHDGEVNRARY 133
PN L++A V+ + AE+ ++ ++ RS F V+ + I H GEVNR R
Sbjct: 122 PNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKYKTIIHPGEVNRIRE 172
Query: 134 MPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGTCN--PDLRLRGHSTEG-YGLSWSKFK 190
+PQN I+AT T S +V ++D P++ + G N PDL L GH + L+
Sbjct: 173 LPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCP-T 231
Query: 191 QGHLLSGSDDAQICLWDI----------------------DSTPKNR--TLDAMQTFKVH 226
+ +LSG D + LW I + T KN T+ + H
Sbjct: 232 EPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPRGVYHGH 291
Query: 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSV-VAHQSEVNCLAFNPFN 285
E VEDVA+ F SVGDD L++WD RT T PV V AH ++++C+ +NP +
Sbjct: 292 EDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTG--TNPVTKVEKAHDADLHCVDWNPHD 349
Query: 286 EWVVATGSTDKTVKLFDIRK-----INTALHTFDCHKEEVFQVGWNPKNETILASCCLGR 340
+ ++ TGS D TV+LFD RK + + ++ F+ HK V V W+P ++ S
Sbjct: 350 DNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDG 409
Query: 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAED---- 396
L +WD R+ ++ + A P L F H GH K+ DF WN + W I SV++D
Sbjct: 410 LLNIWDYDRVSKKS--DRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCETT 467
Query: 397 ---NILQIWQMAENIYHDEDDM 415
LQIW+M++ IY E+++
Sbjct: 468 GGGGTLQIWRMSDLIYRPEEEV 489
>AT4G29730.1 | Symbols: NFC5, MSI5 | NFC5 (Nucleosome/chromatin
assembly factor group C 5) | chr4:14559255-14562522
REVERSE
Length = 487
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/439 (30%), Positives = 208/439 (47%), Gaps = 63/439 (14%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSNQKMILGTHTSENE 76
+++ Y WK P LYD + H L WPSL+ W P E+ K Q++ L T+ +
Sbjct: 54 VDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSK---TQRLYLSEQTNGSV 110
Query: 77 PNYLMLAQVQLPLGDAENDARHYDDDRSDFGGFGAANGKVQIIQQINHDGEVNRARYMPQ 136
PN L++A + + N+ H S F V+ + I H GEVNR R +PQ
Sbjct: 111 PNTLVIANCET-VNRQLNEKAH-----SPF---------VKKYKTIIHPGEVNRIRELPQ 155
Query: 137 NPFIIATKTVSAEVYVFDYSKHPSKPPLDGT--CNPDLRLRGHSTEG-YGLSWSKFKQGH 193
N I+AT T S ++ +++ P + + G PDL L GH + + L+ +
Sbjct: 156 NSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCP-TEPF 214
Query: 194 LLSGSDDAQICLWDID-------STPKNRTLDAMQT-----------------FKVHEGV 229
+LSG D + LW+I S K+ QT + H+
Sbjct: 215 VLSGGKDKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNGHKDT 274
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSV-VAHQSEVNCLAFNPFNEWV 288
VEDVA+ F SVGDD L++WD RT T P V AH ++++C+ +NP + +
Sbjct: 275 VEDVAFCPSSAQEFCSVGDDSCLMLWDARTG--TSPAMKVEKAHDADLHCVDWNPHDNNL 332
Query: 289 VATGSTDKTVKLFDIRK-----INTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLM 343
+ TGS D TV++FD R + + ++ F+ H+ V V W+P ++ S L
Sbjct: 333 ILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLN 392
Query: 344 VWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAED------- 396
+WD R+ ++ E A P L F H GH K+ DF W+ W I SV+++
Sbjct: 393 IWDCDRVGKKS--ERATKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNCESIGGG 450
Query: 397 NILQIWQMAENIYHDEDDM 415
LQIW+M++ IY ED++
Sbjct: 451 GTLQIWRMSDLIYRPEDEV 469
>AT2G19540.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:8461804-8464347 FORWARD
Length = 469
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 143/317 (45%), Gaps = 33/317 (10%)
Query: 119 IQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKH------PSKPPLDGTC---- 168
++++ H G VNR R MPQN I + S V V+D S H DGT
Sbjct: 153 VRRVAHHGCVNRIRAMPQNSHICVSWADSGHVQVWDMSSHLNALAESETEGKDGTSPVLN 212
Query: 169 -NPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHE 227
P + GH EGY + WS G LLSG + I LW+ S + +D + F H
Sbjct: 213 QAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPAS--GSWAVDPI-PFAGHT 269
Query: 228 GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEW 287
VED+ W E +F S D + +WD+R P S AH ++VN +++N
Sbjct: 270 ASVEDLQWSPAEENVFASCSVDGSVAVWDIRLG--KSPALSFKAHNADVNVISWNRLASC 327
Query: 288 VVATGSTDKTVKLFDIRKI---NTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMV 344
++A+GS D T + D+R I + + F+ HK + + W+ + LA +L +
Sbjct: 328 MLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTI 387
Query: 345 WDLSRID--------EEQTPE---DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASV 393
WDLS QT E +D PP+LLF+H G + + W+ +I S
Sbjct: 388 WDLSLEKDEEEEAEFNAQTKELVNTPQDLPPQLLFVHQGQ-KDLKELHWHNQIPGMIIST 446
Query: 394 AED--NILQIWQMAENI 408
A D NIL + + +
Sbjct: 447 AGDGFNILMPYNIQNTL 463
>AT1G29260.1 | Symbols: PEX7, ATPEX7 | PEX7; peroxisome matrix
targeting signal-2 binding / protein binding |
chr1:10224923-10225876 FORWARD
Length = 317
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 22/235 (9%)
Query: 169 NPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEG 228
NP + H+ E + ++ ++ L+ S D + LW +D RT FK H
Sbjct: 97 NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRT------FKEHAY 150
Query: 229 VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWV 288
V W+ +H +F S D L IWD+R P T + AH E+ +N +++ +
Sbjct: 151 CVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP---AHDFEILSCDWNKYDDCI 207
Query: 289 VATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
+AT S DKTVK++D+R L + H V +V ++P +++ASC + +WD
Sbjct: 208 LATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDY- 266
Query: 349 RIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQ 403
EDA L+ + HT + + ++AS D ++ +WQ
Sbjct: 267 ------MVEDA------LVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVYVWQ 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVV 289
V DV W H+ + + D + I+D P + P++S H EV + +NP
Sbjct: 63 VYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSF 122
Query: 290 ATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
T S D TVKL+ + + ++ TF H V+Q WNPK+ + AS L +WD+
Sbjct: 123 LTSSWDDTVKLWAMDR-PASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 181
Query: 350 IDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQM 404
P I H +I WN +D ++A+ + D +++W +
Sbjct: 182 --------------PGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDV 222
>AT5G67320.1 | Symbols: HOS15 | HOS15 (high expression of
osmotically responsive genes 15) |
chr5:26857268-26860974 FORWARD
Length = 613
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 37/241 (15%)
Query: 174 LRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDV 233
L H + L W+K K +LL+GS D +WD+ + + Q F+ H G DV
Sbjct: 361 LSKHKGPIFSLKWNK-KGDYLLTGSVDRTAVVWDV------KAEEWKQQFEFHSGPTLDV 413
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGS 293
W R+ F + D + + + T+P ++ HQ EVNC+ ++P ++A+ S
Sbjct: 414 DW--RNNVSFATSSTDSMIYLCKI---GETRPAKTFTGHQGEVNCVKWDPTGS-LLASCS 467
Query: 294 TDKTVKLFDIRKINTALHTFDCHKEEVFQVGW--------NPKNETILASCCLGRRLMVW 345
D T K+++I++ +T +H H +E++ + W NP + LAS + +W
Sbjct: 468 DDSTAKIWNIKQ-STFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLW 526
Query: 346 DLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMA 405
DAE G ++L GH + +++P ++ IAS + D + IW +
Sbjct: 527 ------------DAELG--KMLCSFNGHREPVYSLAFSPNGEY-IASGSLDKSIHIWSIK 571
Query: 406 E 406
E
Sbjct: 572 E 572
>AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 | COP1
(CONSTITUTIVE PHOTOMORPHOGENIC 1); protein binding /
ubiquitin-protein ligase | chr2:13978000-13983282
FORWARD
Length = 675
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 20/239 (8%)
Query: 114 GKVQIIQQINHDGEVNRARYMPQNPF-----IIATKTVSAEVYVFDYSKHPSKPPLDGTC 168
++++I +I H + A + F + AT VS + VFD+S ++P D C
Sbjct: 354 SRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPA-DMQC 412
Query: 169 NPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEG 228
P + + S LSW+K ++ H+ S + + +WD+ T ++ ++ HE
Sbjct: 413 -PIVEMSTRSKLS-CLSWNKHEKNHIASSDYEGIVTVWDVT------TRQSLMEYEEHEK 464
Query: 229 VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWV 288
V + + S DD + +W R A + ++ + C+ +NP +
Sbjct: 465 RAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINID----MKANICCVKYNPGSSNY 520
Query: 289 VATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
+A GS D + +D+R I+ LH F HK+ V V + NE LAS L +WD+
Sbjct: 521 IAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNE--LASASTDSTLRLWDV 577
>AT3G63460.2 | Symbols: | WD-40 repeat family protein |
chr3:23431009-23437241 REVERSE
Length = 1102
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 10/179 (5%)
Query: 174 LRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDI--DSTPKNRTLDAMQTFKVHEGVVE 231
L H GL ++ L SG+DD +IC+WD+ S P + L + +G +
Sbjct: 118 LSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPL-LKGSGSATQGEIS 176
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVV-AHQSEVNCLAFNPFNEWVVA 290
++W+ + + + S + +IWDLR KP+ + + + + L +NP +
Sbjct: 177 FISWNRKVQQILASTSYNGTTVIWDLRK---QKPIINFADSVRRRCSVLQWNPNVTTQIM 233
Query: 291 TGSTD---KTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
S D T+KL+D+R I + + F H+ V + W P + + L +C R + WD
Sbjct: 234 VASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 105/271 (38%), Gaps = 26/271 (9%)
Query: 143 TKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDDAQ 202
+ + + E++ D+ PL G R + G +F G + G D
Sbjct: 36 SSSANLEIFKLDFQSDDRDLPLVGEIPSSERFNRLAWGRNGSGSEEFALGLIAGGLVDGN 95
Query: 203 ICLWD----IDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258
I LW+ I S P L + VH+G V + ++ L S DD + IWDL
Sbjct: 96 IDLWNPLSLIGSQPSENAL--VGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLL 153
Query: 259 TPAVTK--PV--QSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFD 314
P+ P+ S A Q E++ +++N + ++A+ S + T ++D+RK ++ D
Sbjct: 154 KPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFAD 213
Query: 315 CHKEEVFQVGWNPKNETILASCC---LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG 371
+ + WNP T + L +WD+ I P F
Sbjct: 214 SVRRRCSVLQWNPNVTTQIMVASDDDSSPTLKLWDMRNIMS-----------PVREFT-- 260
Query: 372 GHTSKISDFSWNPCEDWVIASVAEDNILQIW 402
GH + W P + + + A+DN W
Sbjct: 261 GHQRGVIAMEWCPSDSSYLLTCAKDNRTICW 291
>AT3G63460.1 | Symbols: | WD-40 repeat family protein |
chr3:23431009-23437241 REVERSE
Length = 1104
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 10/179 (5%)
Query: 174 LRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDI--DSTPKNRTLDAMQTFKVHEGVVE 231
L H GL ++ L SG+DD +IC+WD+ S P + L + +G +
Sbjct: 118 LSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPL-LKGSGSATQGEIS 176
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVV-AHQSEVNCLAFNPFNEWVVA 290
++W+ + + + S + +IWDLR KP+ + + + + L +NP +
Sbjct: 177 FISWNRKVQQILASTSYNGTTVIWDLRK---QKPIINFADSVRRRCSVLQWNPNVTTQIM 233
Query: 291 TGSTD---KTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
S D T+KL+D+R I + + F H+ V + W P + + L +C R + WD
Sbjct: 234 VASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 105/271 (38%), Gaps = 26/271 (9%)
Query: 143 TKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDDAQ 202
+ + + E++ D+ PL G R + G +F G + G D
Sbjct: 36 SSSANLEIFKLDFQSDDRDLPLVGEIPSSERFNRLAWGRNGSGSEEFALGLIAGGLVDGN 95
Query: 203 ICLWD----IDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258
I LW+ I S P L + VH+G V + ++ L S DD + IWDL
Sbjct: 96 IDLWNPLSLIGSQPSENAL--VGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLL 153
Query: 259 TPAVTK--PV--QSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFD 314
P+ P+ S A Q E++ +++N + ++A+ S + T ++D+RK ++ D
Sbjct: 154 KPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFAD 213
Query: 315 CHKEEVFQVGWNPKNETILASCC---LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHG 371
+ + WNP T + L +WD+ I P F
Sbjct: 214 SVRRRCSVLQWNPNVTTQIMVASDDDSSPTLKLWDMRNIMS-----------PVREFT-- 260
Query: 372 GHTSKISDFSWNPCEDWVIASVAEDNILQIW 402
GH + W P + + + A+DN W
Sbjct: 261 GHQRGVIAMEWCPSDSSYLLTCAKDNRTICW 291
>AT1G18830.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:6489309-6494218 FORWARD
Length = 969
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Query: 174 LRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDV 233
L H GL ++ L SG+DD +C+WD+ + P + T + + +
Sbjct: 111 LSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDL-ANPSKPSHYLKGTGSYMQSEISSL 169
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNP--FNEWVVAT 291
+W+ +++ S + +IWD+ + +++ V + L ++P FN+ +VA+
Sbjct: 170 SWNKGFQHVLASTSHNGTTVIWDVNNEKIITDLKTTV----RCSVLQWDPDHFNQILVAS 225
Query: 292 GS-TDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
+ VKL DIR + + + TF H+ V + W P + L +C R + W+
Sbjct: 226 DEDSSPNVKLLDIRYLQSPVRTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWN 281
>AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region
(InterPro:IPR017986), WD40/YVTN repeat-like
(InterPro:IPR015943), WD40 repeat (InterPro:IPR001680);
BEST Arabidopsis thaliana protein match is: transducin
family protein / WD-40 repeat family protein
(TAIR:AT5G23430.1); Has 84267 Blast hits to 30722
proteins in 748 species: Archae - 68; Bacteria - 7813;
Metazoa - 39755; Fungi - 16342; Plants - 8110; Viruses -
6; Other Eukaryotes - 12173 (source: NCBI BLink). |
chr5:2701448-2706910 FORWARD
Length = 839
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 166 GTCNPDLRLRGHSTEGYGLSWSKF--KQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTF 223
G N L L GHS+ G+ F +G + +G+ I LWD++ RTL
Sbjct: 47 GKPNAILSLYGHSS---GIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTG---- 99
Query: 224 KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNP 283
H V +H E+ F S D L IWD+R + + H VN L F P
Sbjct: 100 --HRSNCVSVNFHPFGEF-FASGSLDTNLKIWDIRKKGC---IHTYKGHTRGVNVLRFTP 153
Query: 284 FNEWVVATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLM 343
W+V +G D VK++D+ LH F H+ ++ + ++P +E +LA+ + +
Sbjct: 154 DGRWIV-SGGEDNVVKVWDL-TAGKLLHEFKSHEGKIQSLDFHP-HEFLLATGSADKTVK 210
Query: 344 VWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQ 403
WDL EL+ G T+ + ++NP V+ + E + W+
Sbjct: 211 FWDLETF--------------ELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWE 256
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 220 MQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCL 279
+Q F H V + + + + G+D + +W + P + S+ H S ++ +
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKP---NAILSLYGHSSGIDSV 65
Query: 280 AFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLG 339
F+ +E +VA G+ T+KL+D+ + + T H+ V ++P E AS L
Sbjct: 66 TFDA-SEGLVAAGAASGTIKLWDLEEAK-VVRTLTGHRSNCVSVNFHPFGE-FFASGSLD 122
Query: 340 RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNIL 399
L +WD+ + + + GHT ++ + P W++ S EDN++
Sbjct: 123 TNLKIWDIRK--------------KGCIHTYKGHTRGVNVLRFTPDGRWIV-SGGEDNVV 167
Query: 400 QIWQM-AENIYHD 411
++W + A + H+
Sbjct: 168 KVWDLTAGKLLHE 180
>AT1G52360.1 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr1:19499282-19505397 FORWARD
Length = 926
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 194 LLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
+L+ +C+W+ +T ++F+V E V + R +++ DD Y+
Sbjct: 30 ILASLYSGTLCIWNY------QTQVMAKSFEVTELPVRSAKFVARKQWVVAG-ADDMYIR 82
Query: 254 IWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTF 313
+++ T V+ AH + C+A +P +V+++ S D +KL+D K F
Sbjct: 83 VYNYNT---MDKVKVFEAHSDYIRCVAVHPTLPYVLSS-SDDMLIKLWDWEKGWACTQIF 138
Query: 314 DCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG- 372
+ H V QV +NPK+ AS L R + +W+L D T + + G + + GG
Sbjct: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
Query: 373 ----------HTSKISDFSWNPC 385
HT+K+ D+ C
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSC 221
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 193 HLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
++LS SDD I LWD + + Q F+ H V V ++ + F S D+ +
Sbjct: 113 YVLSSSDDMLIKLWDWE-----KGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTI 167
Query: 253 LIWDLRTPAVTKPVQSVVAHQSEVNCL-AFNPFNEWVVATGSTDKTVKLFDIRKINTALH 311
IW+L +P P ++ AHQ VNC+ F ++ + TGS D T K++D + + +
Sbjct: 168 KIWNLGSP---DPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSCVQ 223
Query: 312 TFDCHKEEVFQVGWNPKNETIL 333
T + H V V ++P+ I+
Sbjct: 224 TLEGHTHNVSAVCFHPELPIII 245
>AT1G11160.1 | Symbols: | nucleotide binding | chr1:3733406-3739363
FORWARD
Length = 1021
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 176 GHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAW 235
HS LS K LL+G DD ++ LW I T +L H V+ VA+
Sbjct: 13 AHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCG------HTSPVDSVAF 66
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTD 295
+ E L + + +WDL +K V++ H+S + + F+PF E+ +A+GS+D
Sbjct: 67 N-SEEVLVLAGASSGVIKLWDLEE---SKMVRAFTGHRSNCSAVEFHPFGEF-LASGSSD 121
Query: 296 KTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT 355
++++D RK + T+ H + + ++P ++ S L + VWDL+
Sbjct: 122 TNLRVWDTRK-KGCIQTYKGHTRGISTIEFSPDGRWVV-SGGLDNVVKVWDLT------- 172
Query: 356 PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQM 404
+LL H I ++P E +++A+ + D ++ W +
Sbjct: 173 -------AGKLLHEFKCHEGPIRSLDFHPLE-FLLATGSADRTVKFWDL 213
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 220 MQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCL 279
+Q F H G V ++ + L + GDD + +W + T P+ S+ H S V+ +
Sbjct: 8 LQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSI--GKTTSPM-SLCGHTSPVDSV 64
Query: 280 AFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLG 339
AFN E +V G++ +KL+D+ + + + F H+ V ++P E LAS
Sbjct: 65 AFNS-EEVLVLAGASSGVIKLWDLEE-SKMVRAFTGHRSNCSAVEFHPFGE-FLASGSSD 121
Query: 340 RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNIL 399
L VWD + QT + GHT IS ++P WV+ S DN++
Sbjct: 122 TNLRVWDTRKKGCIQT--------------YKGHTRGISTIEFSPDGRWVV-SGGLDNVV 166
Query: 400 QIWQM-AENIYHD 411
++W + A + H+
Sbjct: 167 KVWDLTAGKLLHE 179
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 176 GHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAW 235
GH + + + F + L SGS D + +WD R +QT+K H + + +
Sbjct: 98 GHRSNCSAVEFHPFGE-FLASGSSDTNLRVWD------TRKKGCIQTYKGHTRGISTIEF 150
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTD 295
++ S G D + +WDL K + H+ + L F+P E+++ATGS D
Sbjct: 151 SPDGRWVV-SGGLDNVVKVWDL---TAGKLLHEFKCHEGPIRSLDFHPL-EFLLATGSAD 205
Query: 296 KTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
+TVK +D+ + T V + ++P +T+ G ++ W+
Sbjct: 206 RTVKFWDLETFE-LIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWE 255
>AT4G18900.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:10356465-10359078 FORWARD
Length = 461
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 177 HSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWH 236
H+ GL+W+K + L S S D ++ +WD+ T T + H V+ VAW+
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDV------ATGTCKITMEHHTKEVQAVAWN 285
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDK 296
+ S DQ +++ D R P+ + SV+ S+V LA++P +E D
Sbjct: 286 HYAPEVLLSGSFDQTVVLKDGRQPSHSGFKWSVM---SDVESLAWDPHSEHSFVVSLEDG 342
Query: 297 TVKLFDIRKINTALH------TFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
TVK FD+R+ + + T + H E V +N +LA+ R + +WDLS
Sbjct: 343 TVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLS 400
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 140 IIATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTEGYGLSWSKFKQGHLLSGSD 199
I+A+ + +V V+D + GTC + + H+ E ++W+ + LLSGS
Sbjct: 248 ILASASADKKVKVWDVAT--------GTCK--ITMEHHTKEVQAVAWNHYAPEVLLSGSF 297
Query: 200 DAQICLWDIDSTPKNRTLDAMQTFK-VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258
D + L K+ + FK VE +AW E+ F +D + +D+R
Sbjct: 298 DQTVVL-------KDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVR 350
Query: 259 TPAVT----KPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKIN-TALHTF 313
+++ P ++ H +++N ++ATGS D+TVKL+D+ + + T
Sbjct: 351 QASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATH 410
Query: 314 DCHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
+ + +F + ++P N +LA + L +WD
Sbjct: 411 NPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWD 443
>AT3G15980.3 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr3:5412015-5418313 REVERSE
Length = 918
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 194 LLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
+L+ +C+W+ +T ++F+V E V + R +++ DD Y+
Sbjct: 30 ILASLYSGTVCIWNY------QTQTITKSFEVTELPVRSAKFIPRKQWVVAG-ADDMYIR 82
Query: 254 IWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTF 313
+++ T V+ AH + C+A +P +V+++ S D +KL+D F
Sbjct: 83 VYNYNT---MDKVKVFEAHSDYIRCVAVHPTLPYVLSS-SDDMLIKLWDWENGWACTQIF 138
Query: 314 DCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG- 372
+ H V QV +NPK+ AS L R + +W+L D T + + G + + GG
Sbjct: 139 EGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
Query: 373 ----------HTSKISDFSWNPC 385
HT+K+ D+ C
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSC 221
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 193 HLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
++LS SDD I LWD ++ Q F+ H V V ++ + F S D+ +
Sbjct: 113 YVLSSSDDMLIKLWDWEN-----GWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTI 167
Query: 253 LIWDLRTPAVTKPVQSVVAHQSEVNCL-AFNPFNEWVVATGSTDKTVKLFDIRKINTALH 311
IW+L +P P ++ AHQ VNC+ F ++ + TGS D T K++D + + +
Sbjct: 168 KIWNLGSP---DPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSCVQ 223
Query: 312 TFDCHKEEVFQVGWNPKNETIL 333
T D H V V ++P+ I+
Sbjct: 224 TLDGHTHNVSAVCFHPELPIII 245
>AT3G15980.2 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr3:5412015-5418313 REVERSE
Length = 918
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 194 LLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
+L+ +C+W+ +T ++F+V E V + R +++ DD Y+
Sbjct: 30 ILASLYSGTVCIWNY------QTQTITKSFEVTELPVRSAKFIPRKQWVVAG-ADDMYIR 82
Query: 254 IWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTF 313
+++ T V+ AH + C+A +P +V+++ S D +KL+D F
Sbjct: 83 VYNYNT---MDKVKVFEAHSDYIRCVAVHPTLPYVLSS-SDDMLIKLWDWENGWACTQIF 138
Query: 314 DCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG- 372
+ H V QV +NPK+ AS L R + +W+L D T + + G + + GG
Sbjct: 139 EGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
Query: 373 ----------HTSKISDFSWNPC 385
HT+K+ D+ C
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSC 221
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 193 HLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
++LS SDD I LWD ++ Q F+ H V V ++ + F S D+ +
Sbjct: 113 YVLSSSDDMLIKLWDWEN-----GWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTI 167
Query: 253 LIWDLRTPAVTKPVQSVVAHQSEVNCL-AFNPFNEWVVATGSTDKTVKLFDIRKINTALH 311
IW+L +P P ++ AHQ VNC+ F ++ + TGS D T K++D + + +
Sbjct: 168 KIWNLGSP---DPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSCVQ 223
Query: 312 TFDCHKEEVFQVGWNPKNETIL 333
T D H V V ++P+ I+
Sbjct: 224 TLDGHTHNVSAVCFHPELPIII 245
>AT3G15980.1 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr3:5411699-5418313 REVERSE
Length = 909
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 194 LLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
+L+ +C+W+ +T ++F+V E V + R +++ DD Y+
Sbjct: 30 ILASLYSGTVCIWNY------QTQTITKSFEVTELPVRSAKFIPRKQWVVAG-ADDMYIR 82
Query: 254 IWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTF 313
+++ T V+ AH + C+A +P +V+++ S D +KL+D F
Sbjct: 83 VYNYNT---MDKVKVFEAHSDYIRCVAVHPTLPYVLSS-SDDMLIKLWDWENGWACTQIF 138
Query: 314 DCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG- 372
+ H V QV +NPK+ AS L R + +W+L D T + + G + + GG
Sbjct: 139 EGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
Query: 373 ----------HTSKISDFSWNPC 385
HT+K+ D+ C
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSC 221
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 193 HLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
++LS SDD I LWD ++ Q F+ H V V ++ + F S D+ +
Sbjct: 113 YVLSSSDDMLIKLWDWEN-----GWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTI 167
Query: 253 LIWDLRTPAVTKPVQSVVAHQSEVNCL-AFNPFNEWVVATGSTDKTVKLFDIRKINTALH 311
IW+L +P P ++ AHQ VNC+ F ++ + TGS D T K++D + + +
Sbjct: 168 KIWNLGSP---DPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSCVQ 223
Query: 312 TFDCHKEEVFQVGWNPKNETIL 333
T D H V V ++P+ I+
Sbjct: 224 TLDGHTHNVSAVCFHPELPIII 245
>AT5G23430.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:7894073-7899862 REVERSE
Length = 837
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 220 MQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCL 279
+Q F H V + + + + G+D + +W + P + S+ H S ++ +
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKP---NAILSLYGHSSGIDSV 65
Query: 280 AFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLG 339
F+ +E +VA G+ T+KL+D+ + + T H+ V ++P E AS L
Sbjct: 66 TFDA-SEVLVAAGAASGTIKLWDLEEAKI-VRTLTGHRSNCISVDFHPFGE-FFASGSLD 122
Query: 340 RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNIL 399
L +WD+ + + + GHT ++ + P WV+ S EDNI+
Sbjct: 123 TNLKIWDIRK--------------KGCIHTYKGHTRGVNVLRFTPDGRWVV-SGGEDNIV 167
Query: 400 QIWQM 404
++W +
Sbjct: 168 KVWDL 172
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 174 LRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDV 233
L GH + + + F + SGS D + +WDI R + T+K H V +
Sbjct: 97 LTGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDI------RKKGCIHTYKGHTRGVNVL 149
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGS 293
+ ++ S G+D + +WDL K + +H+ ++ L F+P +E+++ATGS
Sbjct: 150 RFTPDGRWVV-SGGEDNIVKVWDL---TAGKLLTEFKSHEGQIQSLDFHP-HEFLLATGS 204
Query: 294 TDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
D+TVK +D+ + + V + +NP +T+L C L L ++
Sbjct: 205 ADRTVKFWDLETFEL-IGSGGPETAGVRCLSFNPDGKTVL--CGLQESLKIF 253
>AT1G79990.3 | Symbols: | protein binding / structural molecule |
chr1:30085910-30091949 FORWARD
Length = 920
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 194 LLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
+L+ +C+W+ +T +++F V E V + R +++ DD ++
Sbjct: 30 ILASLYSGTLCIWNY------QTQTMVKSFDVTELPVRSAKFIARKQWVVAG-ADDMFIR 82
Query: 254 IWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTF 313
+++ T K + AH + C+A +P +V+++ S D +KL+D K F
Sbjct: 83 VYNYNTMDKIKVFE---AHADYIRCVAVHPTLPYVLSS-SDDMLIKLWDWEKGWLCTQIF 138
Query: 314 DCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG- 372
+ H V QV +NPK+ AS L R + +W+L D T + G + + GG
Sbjct: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGD 198
Query: 373 ----------HTSKISDFSWNPC 385
HT+K+ D+ C
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSC 221
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 193 HLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
++LS SDD I LWD + + Q F+ H V V ++ + F S D+ +
Sbjct: 113 YVLSSSDDMLIKLWDWE-----KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTI 167
Query: 253 LIWDLRTPAVTKPVQSVVAHQSEVNCL-AFNPFNEWVVATGSTDKTVKLFDIRKINTALH 311
IW+L +P P ++ AH VNC+ F ++ + TGS D T K++D + + +
Sbjct: 168 KIWNLGSP---DPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSCVQ 223
Query: 312 TFDCHKEEVFQVGWNPKNETIL 333
T + H V V ++P+ I+
Sbjct: 224 TLEGHTHNVSAVSFHPELPIII 245
>AT5G23430.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:7894073-7899862 REVERSE
Length = 836
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 220 MQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCL 279
+Q F H V + + + + G+D + +W + P + S+ H S ++ +
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKP---NAILSLYGHSSGIDSV 65
Query: 280 AFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLG 339
F+ +E +VA G+ T+KL+D+ + + T H+ V ++P E AS L
Sbjct: 66 TFDA-SEVLVAAGAASGTIKLWDLEEAKI-VRTLTGHRSNCISVDFHPFGE-FFASGSLD 122
Query: 340 RRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNIL 399
L +WD+ + + + GHT ++ + P WV+ S EDNI+
Sbjct: 123 TNLKIWDIRK--------------KGCIHTYKGHTRGVNVLRFTPDGRWVV-SGGEDNIV 167
Query: 400 QIWQM 404
++W +
Sbjct: 168 KVWDL 172
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 174 LRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDV 233
L GH + + + F + SGS D + +WDI R + T+K H V +
Sbjct: 97 LTGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDI------RKKGCIHTYKGHTRGVNVL 149
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGS 293
+ ++ S G+D + +WDL K + +H+ ++ L F+P +E+++ATGS
Sbjct: 150 RFTPDGRWVV-SGGEDNIVKVWDL---TAGKLLTEFKSHEGQIQSLDFHP-HEFLLATGS 204
Query: 294 TDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
D+TVK +D+ + + V + +NP +T+L C L L ++
Sbjct: 205 ADRTVKFWDLETFEL-IGSGGPETAGVRCLSFNPDGKTVL--CGLQESLKIF 253
>AT1G79990.5 | Symbols: | protein binding / structural molecule |
chr1:30085910-30091949 FORWARD
Length = 912
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 194 LLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
+L+ +C+W+ +T +++F V E V + R +++ DD ++
Sbjct: 30 ILASLYSGTLCIWNY------QTQTMVKSFDVTELPVRSAKFIARKQWVVAG-ADDMFIR 82
Query: 254 IWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTF 313
+++ T K + AH + C+A +P +V+++ S D +KL+D K F
Sbjct: 83 VYNYNTMDKIKVFE---AHADYIRCVAVHPTLPYVLSS-SDDMLIKLWDWEKGWLCTQIF 138
Query: 314 DCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG- 372
+ H V QV +NPK+ AS L R + +W+L D T + G + + GG
Sbjct: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGD 198
Query: 373 ----------HTSKISDFSWNPC 385
HT+K+ D+ C
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSC 221
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 193 HLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
++LS SDD I LWD + + Q F+ H V V ++ + F S D+ +
Sbjct: 113 YVLSSSDDMLIKLWDWE-----KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTI 167
Query: 253 LIWDLRTPAVTKPVQSVVAHQSEVNCL-AFNPFNEWVVATGSTDKTVKLFDIRKINTALH 311
IW+L +P P ++ AH VNC+ F ++ + TGS D T K++D + + +
Sbjct: 168 KIWNLGSP---DPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSCVQ 223
Query: 312 TFDCHKEEVFQVGWNPKNETIL 333
T + H V V ++P+ I+
Sbjct: 224 TLEGHTHNVSAVSFHPELPIII 245
>AT1G79990.1 | Symbols: | protein binding / structural molecule |
chr1:30084522-30091949 FORWARD
Length = 1135
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 194 LLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
+L+ +C+W+ +T +++F V E V + R +++ DD ++
Sbjct: 245 ILASLYSGTLCIWNY------QTQTMVKSFDVTELPVRSAKFIARKQWVVAG-ADDMFIR 297
Query: 254 IWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTF 313
+++ T ++ AH + C+A +P +V+++ S D +KL+D K F
Sbjct: 298 VYNYNT---MDKIKVFEAHADYIRCVAVHPTLPYVLSS-SDDMLIKLWDWEKGWLCTQIF 353
Query: 314 DCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGG- 372
+ H V QV +NPK+ AS L R + +W+L D T + G + + GG
Sbjct: 354 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGD 413
Query: 373 ----------HTSKISDFSWNPC 385
HT+K+ D+ C
Sbjct: 414 KPYLITGSDDHTAKVWDYQTKSC 436
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 193 HLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
++LS SDD I LWD + + Q F+ H V V ++ + F S D+ +
Sbjct: 328 YVLSSSDDMLIKLWDWE-----KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTI 382
Query: 253 LIWDLRTPAVTKPVQSVVAHQSEVNCL-AFNPFNEWVVATGSTDKTVKLFDIRKINTALH 311
IW+L +P P ++ AH VNC+ F ++ + TGS D T K++D + + +
Sbjct: 383 KIWNLGSP---DPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSCVQ 438
Query: 312 TFDCHKEEVFQVGWNPKNETIL 333
T + H V V ++P+ I+
Sbjct: 439 TLEGHTHNVSAVSFHPELPIII 460
>AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin p80
subunit, putative | chr1:22564785-22571555 FORWARD
Length = 1180
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 28/229 (12%)
Query: 176 GHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAW 235
HS LS K ++G DD ++ LW I ++ + H V+ VA+
Sbjct: 13 AHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKP------TSLMSLCGHTSAVDSVAF 66
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTD 295
E L + + +WD+ K V++ H+S + + F+PF E+ +A+GS+D
Sbjct: 67 D-SAEVLVLAGASSGVIKLWDVEE---AKMVRAFTGHRSNCSAVEFHPFGEF-LASGSSD 121
Query: 296 KTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT 355
+K++DIRK + T+ H + + + P ++ S L + VWDL+
Sbjct: 122 ANLKIWDIRK-KGCIQTYKGHSRGISTIRFTPDGRWVV-SGGLDNVVKVWDLT------- 172
Query: 356 PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQM 404
+LL H I ++P E +++A+ + D ++ W +
Sbjct: 173 -------AGKLLHEFKFHEGPIRSLDFHPLE-FLLATGSADRTVKFWDL 213
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 220 MQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKP--VQSVVAHQSEVN 277
+Q F H V ++ + LF + GDD + +W A+ KP + S+ H S V+
Sbjct: 8 LQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLW-----AIGKPTSLMSLCGHTSAVD 62
Query: 278 CLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCC 337
+AF+ E +V G++ +KL+D+ + + F H+ V ++P E LAS
Sbjct: 63 SVAFDSA-EVLVLAGASSGVIKLWDVEEAK-MVRAFTGHRSNCSAVEFHPFGE-FLASGS 119
Query: 338 LGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDN 397
L +WD+ + QT + GH+ IS + P WV+ S DN
Sbjct: 120 SDANLKIWDIRKKGCIQT--------------YKGHSRGISTIRFTPDGRWVV-SGGLDN 164
Query: 398 ILQIWQM-AENIYHD 411
++++W + A + H+
Sbjct: 165 VVKVWDLTAGKLLHE 179
>AT3G49660.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:18413690-18415223 FORWARD
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 24/246 (9%)
Query: 163 PLDGTCNPDLRLRGHSTEGYGLSWSKFKQ-GHLL-SGSDDAQICLWDIDSTPKNRTLDAM 220
P + P + + ++ +S KF G LL S S D I + I+ T + + +
Sbjct: 6 PATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTIN-TINDPIAEPV 64
Query: 221 QTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLA 280
Q F HE + DVA+ ++ S DD+ L +WD+ T ++ +++++ H + C+
Sbjct: 65 QEFTGHENGISDVAFSSDARFIV-SASDDKTLKLWDVETGSL---IKTLIGHTNYAFCVN 120
Query: 281 FNPFNEWVVATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGR 340
FNP + +V+ GS D+TV+++D+ L H + V V +N I++S G
Sbjct: 121 FNPQSNMIVS-GSFDETVRIWDV-TTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDG- 177
Query: 341 RLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQ 400
+WD +T D E+ P +S ++P +++ DN L+
Sbjct: 178 LCRIWDSGTGHCVKTLIDDENPP-------------VSFVRFSPNGKFILVGTL-DNTLR 223
Query: 401 IWQMAE 406
+W ++
Sbjct: 224 LWNISS 229
>AT4G35370.1 | Symbols: | nucleotide binding |
chr4:16815138-16817504 FORWARD
Length = 433
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 197 GSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256
G+ ++ I +WD+D TL T H G V D+AW+ + S +D+ + +WD
Sbjct: 186 GTMESSIEIWDLDLVCTCATLCTTGTDNSHTGPVIDLAWNKEFRNIVASGSEDKKVKVWD 245
Query: 257 LRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFDCH 316
+ T ++ H+ +V+ +A+N + V+ +GS D+TV L D R + + +
Sbjct: 246 VATGKCKVTMEH---HEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNSGLKWST- 301
Query: 317 KEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSK 376
+ +V ++ W+P +E + +D A D P FI H S+
Sbjct: 302 EAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTR----------ASDLSPS--FIIHAHDSE 349
Query: 377 ISDFSWNPCEDWVIASVAEDNILQIWQMAEN 407
+S S+N ++A+ + D +++W ++ N
Sbjct: 350 VSSISYNIHAPNLLATGSADESVKLWDLSNN 380
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 16/213 (7%)
Query: 137 NPFIIATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTEGYGLSWSKFKQGHLLS 196
N I T S E++ D + GT N H+ L+W+K + + S
Sbjct: 181 NFVAIGTMESSIEIWDLDLVCTCATLCTTGTDN------SHTGPVIDLAWNKEFRNIVAS 234
Query: 197 GSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256
GS+D ++ +WD+ +T K + T + HE V VAW+ + S D+ +++ D
Sbjct: 235 GSEDKKVKVWDV-ATGKCKV-----TMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKD 288
Query: 257 LRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTA-LHTFDC 315
R P+ + S +++V LA++P +E D TVK FD R + +
Sbjct: 289 GRDPSNSGLKWST---EAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHA 345
Query: 316 HKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
H EV + +N +LA+ + +WDLS
Sbjct: 346 HDSEVSSISYNIHAPNLLATGSADESVKLWDLS 378
>AT4G18905.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:10360234-10362991 FORWARD
Length = 494
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 18/181 (9%)
Query: 177 HSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWH 236
H+ GL+W+K + L S S D ++ +WD+ T T + H V+ VAW+
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDV------ATGTCKITMEHHTKEVQAVAWN 317
Query: 237 LRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDK 296
+ S DQ +++ D R P+ + SV+ S+V LA++P E D
Sbjct: 318 HYAPEVLLSGSFDQTVVMKDGRQPSHSGFKWSVM---SDVESLAWDPHCEHSFVVSLEDG 374
Query: 297 TVKLFDIRKINTA-------LHTFDCHKEE--VFQVGWNPKNETILASCCLGRRLMVWDL 347
TVK FDIR + +T H ++ V + +N +LA+ + + + +WDL
Sbjct: 375 TVKGFDIRAAQSGSDSDLNPTYTIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDL 434
Query: 348 S 348
S
Sbjct: 435 S 435
>AT5G25150.1 | Symbols: TAF5 | TAF5 (TBP-ASSOCIATED FACTOR 5);
nucleotide binding / transcription regulator |
chr5:8677117-8682058 FORWARD
Length = 669
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 29/234 (12%)
Query: 174 LRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDV 233
L GHS Y ++S +LS S D I LW ST N L +K H V D
Sbjct: 414 LLGHSGPVYSATFSP-PGDFVLSSSADTTIRLW---STKLNANL---VCYKGHNYPVWDA 466
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGS 293
+ Y F S D+ IW + +P++ + H S+V+C+ ++P N +ATGS
Sbjct: 467 QFSPFGHY-FASCSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVQWHP-NCNYIATGS 521
Query: 294 TDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
+DKTV+L+D+ + + F H+ V + +P +AS +M+WDLS
Sbjct: 522 SDKTVRLWDV-QTGECVRIFIGHRSMVLSLAMSPDGR-YMASGDEDGTIMMWDLS----- 574
Query: 354 QTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAEN 407
A P + GH S + S++ E ++AS + D +++W + +
Sbjct: 575 ----TARCITPLM-----GHNSCVWSLSYSG-EGSLLASGSADCTVKLWDVTSS 618
>AT5G13480.1 | Symbols: FY | FY; protein binding |
chr5:4326638-4331557 REVERSE
Length = 647
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 150 VYVFDYSKHPSKPPLDGTCNPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDID 209
V V+D++K C + L GH + + W K L+SG D + LWD
Sbjct: 231 VKVWDFTK----------CVDESSLTGHGWDVKSVDWHPTKS-LLVSGGKDQLVKLWDT- 278
Query: 210 STPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSV 269
R+ + + H+ +V V W+ +L + DQ + ++D+RT K +QS
Sbjct: 279 -----RSGRELCSLHGHKNIVLSVKWNQNGNWLL-TASKDQIIKLYDIRT---MKELQSF 329
Query: 270 VAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNP 327
H +V LA++P +E +GS+D ++ + + N + + H V+ + W+P
Sbjct: 330 RGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHP 387
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 36/238 (15%)
Query: 169 NPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLW--DIDSTPKNRTLDAMQTFKVH 226
N ++ L+ H + WS + +++SG D + W ++++ N+T H
Sbjct: 156 NFEMILQAHDQPIRSMVWSH-NENYMVSGDDGGTLKYWQNNMNNVKANKT--------AH 206
Query: 227 EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPV--QSVVAHQSEVNCLAFNPF 284
+ + D+++ + + F S DD + +WD TK V S+ H +V + ++P
Sbjct: 207 KESIRDLSF-CKTDLKFCSCSDDTTVKVWDF-----TKCVDESSLTGHGWDVKSVDWHPT 260
Query: 285 NEWVVATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMV 344
+V +G D+ VKL+D R L + HK V V WN +N L + + + +
Sbjct: 261 KSLLV-SGGKDQLVKLWDTRS-GRELCSLHGHKNIVLSVKWN-QNGNWLLTASKDQIIKL 317
Query: 345 WDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIW 402
+D+ + E Q+ GHT ++ +W+PC + S + D + W
Sbjct: 318 YDIRTMKELQSFR--------------GHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 361
>AT2G43770.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:18134272-18135303 REVERSE
Length = 343
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 170 PDLRLRGHSTEGYGLSWSKFKQGHLL--SGSDDAQICLWDIDSTPKNRTLDAMQTFKVHE 227
P + L GH + Y + KF L SGS D +I LW + KN K H+
Sbjct: 45 PIMLLSGHPSAVYTM---KFNPAGTLIASGSHDREIFLWRVHGDCKN-----FMVLKGHK 96
Query: 228 GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEW 287
+ D+ W + S D+ + WD+ T K ++ + H S VN
Sbjct: 97 NAILDLHWTSDGSQIV-SASPDKTVRAWDVET---GKQIKKMAEHSSFVNSCCPTRRGPP 152
Query: 288 VVATGSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
++ +GS D T KL+D+R+ A+ TF K ++ V ++ + I + + VWDL
Sbjct: 153 LIISGSDDGTAKLWDMRQ-RGAIQTFP-DKYQITAVSFSDAADKIFTG-GVDNDVKVWDL 209
Query: 348 SRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQM 404
+ + T E GH I+ S +P +++ + DN L +W M
Sbjct: 210 RKGEATMTLE--------------GHQDTITGMSLSPDGSYLLTN-GMDNKLCVWDM 251
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 114/289 (39%), Gaps = 39/289 (13%)
Query: 118 IIQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGH 177
I+ H V ++ P +IA+ + E++++ + G C + L+GH
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGT-LIASGSHDREIFLWR---------VHGDCKNFMVLKGH 95
Query: 178 STEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHL 237
L W+ ++S S D + WD++ T ++ H V
Sbjct: 96 KNAILDLHWTS-DGSQIVSASPDKTVRAWDVE------TGKQIKKMAEHSSFVNSCCPTR 148
Query: 238 RHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKT 297
R L S DD +WD+R + + ++ ++F+ + + TG D
Sbjct: 149 RGPPLIISGSDDGTAKLWDMRQRGAIQ----TFPDKYQITAVSFSDAADKIF-TGGVDND 203
Query: 298 VKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357
VK++D+RK A T + H++ + + +P +L + + +L VWD+ P+
Sbjct: 204 VKVWDLRK-GEATMTLEGHQDTITGMSLSPDGSYLLTN-GMDNKLCVWDM----RPYAPQ 257
Query: 358 DAEDGPPELLFIHGGHT----SKISDFSWNPCEDWVIASVAEDNILQIW 402
+ + I GH + SW+P V A + D ++ IW
Sbjct: 258 N------RCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAG-SSDRMVHIW 299
>AT2G21390.1 | Symbols: | coatomer protein complex, subunit alpha,
putative | chr2:9152428-9156577 FORWARD
Length = 1218
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 28/248 (11%)
Query: 183 GLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYL 242
GLS+ K+ +L+ I LWD R + F HEG V V +H + L
Sbjct: 14 GLSFHP-KRPWILASLHSGVIQLWDY------RMGTLIDRFDEHEGPVRGVHFH-NSQPL 65
Query: 243 FGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFD 302
F S GDD + +W+ +T + + +++ H + + F+ N W+V + S D+T+++++
Sbjct: 66 FVSGGDDYKIKVWNYKT---HRCLFTLLGHLDYIRTVQFHHENPWIV-SASDDQTIRIWN 121
Query: 303 IRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE--------- 353
+ T + H V ++PK E ++ S L + + VWD+ + ++
Sbjct: 122 WQS-RTCISVLTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLM 179
Query: 354 ---QTPEDAEDGPPELL-FIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIY 409
Q D G ++ ++ GH ++ S++P +I S A+D +++W+M E
Sbjct: 180 RFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLP-LIVSGADDRQVKLWRMNETKA 238
Query: 410 HDEDDMPG 417
+ D + G
Sbjct: 239 WEVDTLRG 246
>AT4G02730.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:1207759-1209066 FORWARD
Length = 333
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 53/271 (19%)
Query: 174 LRGHSTEGYGLSWSKFKQ-GHLL-SGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVE 231
L GH+ +S KF G+LL S S D + LW + N +L + ++ H +
Sbjct: 39 LEGHTA---AISCVKFSNDGNLLASASVDKTMILW----SATNYSL--IHRYEGHSSGIS 89
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVAT 291
D+AW Y S DD L IWD R+P + ++ + H + V C+ FNP + +V +
Sbjct: 90 DLAWSSDSHYTC-SASDDCTLRIWDARSPY--ECLKVLRGHTNFVFCVNFNPPSNLIV-S 145
Query: 292 GSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWD----- 346
GS D+T++++++ K + H + V +N ++ +++ S +WD
Sbjct: 146 GSFDETIRIWEV-KTGKCVRMIKAHSMPISSVHFN-RDGSLIVSASHDGSCKIWDAKEGT 203
Query: 347 -LSRIDEEQTP-----------------------EDAEDGPPELLFIHGGHTSKI----S 378
L + ++++P + + + L ++ GHT+K+ S
Sbjct: 204 CLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITS 263
Query: 379 DFSWNPCEDWVIASVAEDNILQIWQM-AENI 408
FS + I S +EDN + +W + A NI
Sbjct: 264 AFSVTNGK--YIVSGSEDNCVYLWDLQARNI 292
>AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide binding |
chr2:17304319-17306855 REVERSE
Length = 554
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 28/209 (13%)
Query: 194 LLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
L + S D LW D T +QTF+ H + VA+H +YL G+ D+
Sbjct: 313 LATASADRTAKLWKTDGT-------LLQTFEGHLDRLARVAFHPSGKYL-GTTSYDKTWR 364
Query: 254 IWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTF 313
+WD+ T A + H V +AF + G D +++D+R + L F
Sbjct: 365 LWDINTGA---ELLLQEGHSRSVYGIAFQQDGALAASCG-LDSLARVWDLRTGRSIL-VF 419
Query: 314 DCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGH 373
H + VF V ++P N LAS + +WDL R+ + L+I H
Sbjct: 420 QGHIKPVFSVNFSP-NGYHLASGGEDNQCRIWDL-RMRKS-------------LYIIPAH 464
Query: 374 TSKISDFSWNPCEDWVIASVAEDNILQIW 402
+ +S + P E + +A+ + D + IW
Sbjct: 465 ANLVSQVKYEPQEGYFLATASYDMKVNIW 493
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 26/175 (14%)
Query: 242 LFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLF 301
L S G D +WDLRT + + H V + F+P N + +A+G D +++
Sbjct: 395 LAASCGLDSLARVWDLRT---GRSILVFQGHIKPVFSVNFSP-NGYHLASGGEDNQCRIW 450
Query: 302 DIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVW---DLSRIDEEQTPED 358
D+R + +L+ H V QV + P+ LA+ ++ +W D S
Sbjct: 451 DLR-MRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFS---------- 499
Query: 359 AEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDED 413
L+ GH SK++ + IA+V+ D +++W + N DE+
Sbjct: 500 -------LVKSLAGHESKVASLDIT-ADSSCIATVSHDRTIKLWTSSGNDDEDEE 546
>AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS
1); basal transcription repressor/ nucleotide binding /
protein binding | chr4:9023775-9027443 FORWARD
Length = 486
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 172 LRLRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVE 231
L L GH + GL+ S + ++ S DD Q+ WD++ ++++ H V
Sbjct: 212 LTLTGHIEQVRGLAVSN-RHTYMFSAGDDKQVKCWDLEQN------KVIRSYHGHLSGVY 264
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVAT 291
+A H + L + G D +WD+RT + ++ H + V C F + V T
Sbjct: 265 CLALHPTLDVLL-TGGRDSVCRVWDIRT---KMQIFALSGHDNTV-CSVFTRPTDPQVVT 319
Query: 292 GSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASC 336
GS D T+K +D+R T + T HK+ V + +PK E AS
Sbjct: 320 GSHDTTIKFWDLRYGKT-MSTLTHHKKSVRAMTLHPK-ENAFASA 362
>AT3G16650.1 | Symbols: | PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) | chr3:5671133-5675106 FORWARD
Length = 479
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 172 LRLRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVE 231
L L GH + GL+ S + ++ S DD Q+ WD++ ++++ H V
Sbjct: 206 LTLTGHIGQVRGLAVSN-RHTYMFSAGDDKQVKCWDLEQN------KVIRSYHGHLHGVY 258
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVAT 291
+A H + + + G D +WD+RT K V+ H S+V + P + V+ T
Sbjct: 259 CLALHPTLDVVL-TGGRDSVCRVWDIRT----KMQIFVLPHDSDVFSVLARPTDPQVI-T 312
Query: 292 GSTDKTVKLFDIRKINTALHTFDCHKEEVFQVGWNPK-NETILASC 336
GS D T+K +D+R ++ T HK+ V + +PK N+ + AS
Sbjct: 313 GSHDSTIKFWDLR-YGKSMATITNHKKTVRAMALHPKENDFVSASA 357
>AT5G05970.1 | Symbols: NEDD1 | NEDD1 (NEURAL PRECURSOR CELL
EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1);
nucleotide binding | chr5:1795464-1799313 FORWARD
Length = 781
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 184 LSWSKFKQGHLLSGSDDAQICLWDIDS-TPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYL 242
L +S+ + L++ DD + LWD +PK M K H V + +E +
Sbjct: 184 LDYSRSSRHLLVTAGDDGTVHLWDTTGRSPK------MSWLKQHSAPTAGVCFSPSNEKI 237
Query: 243 FGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFD 302
SVG D+ L +D + ++ S +A+++ + LAF N +++ G+++ V +D
Sbjct: 238 IASVGMDKKLYTYD----SGSRRSSSCIAYEAPFSSLAFGD-NGYILVAGTSNGRVVFYD 292
Query: 303 IR---KINTALHTFDCHKEEVFQVGWNPKNETIL 333
IR + T LH F + E+V + W I+
Sbjct: 293 IRGKPQPVTVLHAF-SNSEDVTSLSWQTSKPVIV 325
>AT2G32700.6 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 785
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 31/190 (16%)
Query: 242 LFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLF 301
L S G D+ + IW++ T V + H + + F P N +AT S DKT+K++
Sbjct: 522 LLASAGHDKKVFIWNMETLQVESTPEE---HAHIITDVRFRP-NSTQLATSSFDKTIKIW 577
Query: 302 DIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWD--------------- 346
D L T H V + ++PK +L SC + WD
Sbjct: 578 DASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQ 637
Query: 347 ----------LSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAED 396
L+ E + + + I GH+S + W+P + ++ASV+ED
Sbjct: 638 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSED 696
Query: 397 NILQIWQMAE 406
+ ++W ++
Sbjct: 697 AV-KLWSLSS 705
>AT5G05970.2 | Symbols: NEDD1 | NEDD1 (NEURAL PRECURSOR CELL
EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1);
nucleotide binding | chr5:1795464-1799313 FORWARD
Length = 782
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 184 LSWSKFKQGHLLSGSDDAQICLWDIDS-TPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYL 242
L +S+ + L++ DD + LWD +PK M K H V + +E +
Sbjct: 184 LDYSRSSRHLLVTAGDDGTVHLWDTTGRSPK------MSWLKQHSAPTAGVCFSPSNEKI 237
Query: 243 FGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFD 302
SVG D+ L +D + ++ S +A+++ + LAF N +++ G+++ V +D
Sbjct: 238 IASVGMDKKLYTYD----SGSRRSSSCIAYEAPFSSLAFGD-NGYILVAGTSNGRVVFYD 292
Query: 303 IR---KINTALHTFDCHKEEVFQVGWNPKNETIL 333
IR + T LH F + E+V + W I+
Sbjct: 293 IRGKPQPVTVLHAF-SNSEDVTSLSWQTSKPVIV 325
>AT2G32700.2 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 242 LFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLF 301
L S G D+ + IW++ T V + H + + F P N +AT S DKT+K++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEE---HAHIITDVRFRP-NSTQLATSSFDKTIKIW 579
Query: 302 DIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-----RIDEEQTP 356
D L T H V + ++PK +L SC + WD++ + T
Sbjct: 580 DASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQ 639
Query: 357 EDAEDGPPELLF--------------------IHGGHTSKISDFSWNPCEDWVIASVAED 396
+ + L I GH+S + W+P + ++ASV+ED
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSED 698
Query: 397 NILQIWQMAE 406
+ ++W ++
Sbjct: 699 AV-KLWSLSS 707
>AT2G32700.1 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 242 LFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLF 301
L S G D+ + IW++ T V + H + + F P N +AT S DKT+K++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEE---HAHIITDVRFRP-NSTQLATSSFDKTIKIW 579
Query: 302 DIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-----RIDEEQTP 356
D L T H V + ++PK +L SC + WD++ + T
Sbjct: 580 DASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQ 639
Query: 357 EDAEDGPPELLF--------------------IHGGHTSKISDFSWNPCEDWVIASVAED 396
+ + L I GH+S + W+P + ++ASV+ED
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSED 698
Query: 397 NILQIWQMAE 406
+ ++W ++
Sbjct: 699 AV-KLWSLSS 707
>AT2G32700.4 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 242 LFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLF 301
L S G D+ + IW++ T V + H + + F P N +AT S DKT+K++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEE---HAHIITDVRFRP-NSTQLATSSFDKTIKIW 579
Query: 302 DIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-----RIDEEQTP 356
D L T H V + ++PK +L SC + WD++ + T
Sbjct: 580 DASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQ 639
Query: 357 EDAEDGPPELLF--------------------IHGGHTSKISDFSWNPCEDWVIASVAED 396
+ + L I GH+S + W+P + ++ASV+ED
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSED 698
Query: 397 NILQIWQMAE 406
+ ++W ++
Sbjct: 699 AV-KLWSLSS 707
>AT2G32700.5 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 242 LFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLF 301
L S G D+ + IW++ T V + H + + F P N +AT S DKT+K++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEE---HAHIITDVRFRP-NSTQLATSSFDKTIKIW 579
Query: 302 DIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-----RIDEEQTP 356
D L T H V + ++PK +L SC + WD++ + T
Sbjct: 580 DASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQ 639
Query: 357 EDAEDGPPELLF--------------------IHGGHTSKISDFSWNPCEDWVIASVAED 396
+ + L I GH+S + W+P + ++ASV+ED
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSED 698
Query: 397 NILQIWQMAE 406
+ ++W ++
Sbjct: 699 AV-KLWSLSS 707
>AT2G32700.3 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 242 LFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLF 301
L S G D+ + IW++ T V + H + + F P N +AT S DKT+K++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVESTPEE---HAHIITDVRFRP-NSTQLATSSFDKTIKIW 579
Query: 302 DIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS-----RIDEEQTP 356
D L T H V + ++PK +L SC + WD++ + T
Sbjct: 580 DASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVKGASTQ 639
Query: 357 EDAEDGPPELLF--------------------IHGGHTSKISDFSWNPCEDWVIASVAED 396
+ + L I GH+S + W+P + ++ASV+ED
Sbjct: 640 VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSED 698
Query: 397 NILQIWQMAE 406
+ ++W ++
Sbjct: 699 AV-KLWSLSS 707
>AT2G26060.2 | Symbols: emb1345 | emb1345 (embryo defective 1345);
nucleotide binding | chr2:11102400-11105081 FORWARD
Length = 337
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 208 IDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEY------LFGSVGDDQYLLIWDLRTPA 261
+D KN L +Q + H V VAW+ + + S D + IW+ + +
Sbjct: 1 MDLMEKNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLS 60
Query: 262 VTKPVQSVV--AHQSEVNCLAFNPFNEWVVATGSTDKTVKLF-DIRKINTALHTFDCHKE 318
+ ++V+ H V A++P + ++AT S D T ++ + + T + H+
Sbjct: 61 RSWTCKTVLEETHTRTVRSCAWSPSGQ-LLATASFDGTTGIWKNYGSEFECISTLEGHEN 119
Query: 319 EVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKIS 378
EV V WN + LA+C + + +W++ E + + GHT +
Sbjct: 120 EVKSVSWNASG-SCLATCSRDKSVWIWEV-----------LEGNEYDCAAVLTGHTQDVK 167
Query: 379 DFSWNPCEDWVIASVAEDNILQIW 402
W+P D V+ S + DN +++W
Sbjct: 168 MVQWHPTMD-VLFSCSYDNTIKVW 190
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21401423-21404203 FORWARD
Length = 473
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 24/155 (15%)
Query: 257 LRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALHTFDCH 316
R V + Q++ H V C++F+P + +A+GS D TV+L+D+ T L T H
Sbjct: 93 FRIRPVNRCSQTIAGHAEAVLCVSFSPDGK-QLASGSGDTTVRLWDLY-TETPLFTCKGH 150
Query: 317 KEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSK 376
K V V W+P + +++ G + W+ + + E +P GH
Sbjct: 151 KNWVLTVAWSPDGKHLVSGSKSG-EICCWNPKKGELEGSPLT-------------GHKKW 196
Query: 377 ISDFSW------NPCEDWVIASVAEDNILQIWQMA 405
I+ SW +PC +V +S +D +IW +
Sbjct: 197 ITGISWEPVHLSSPCRRFVTSS--KDGDARIWDIT 229
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 22/160 (13%)
Query: 245 SVGDDQYLLIWDLRTPAVTK-PVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDI 303
S DD + +W+ P+V+K P + + HQ VN + F+P +W +A+ S DK+V+L++
Sbjct: 334 SGSDDFTMFLWE---PSVSKQPKKRLTGHQQLVNHVYFSPDGKW-IASASFDKSVRLWN- 388
Query: 304 RKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 363
+ F H V+QV W+ + +L S L +W++ +T + +D P
Sbjct: 389 GITGQFVTVFRGHVGPVYQVSWSA-DSRLLLSGSKDSTLKIWEI------RTKKLKQDLP 441
Query: 364 PELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQ 403
GH ++ W+P + V++ +D +L++W+
Sbjct: 442 --------GHADEVFAVDWSPDGEKVVSG-GKDRVLKLWK 472
>AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE);
nucleotide binding | chr5:5504541-5509266 REVERSE
Length = 876
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 194 LLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
L S QI +WD++ TL ++++K HEG V +A H L + G D+ +L
Sbjct: 75 LFSAGHSRQIRVWDLE------TLKCIRSWKGHEGPVMGMACHASGG-LLATAGADRKVL 127
Query: 254 IWDLRTPAVTKPVQSVVAHQSEVNCLAFNP-FNEWVVATGSTDKTVKLFDIRKINT---A 309
+WD+ T + H+ V+ + F+P N+ ++ +GS D TV+++D+ NT
Sbjct: 128 VWDVDGGFCTHYFR---GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKC 184
Query: 310 LHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMV--WDL 347
L + H V + + T+ ++ GR +V WDL
Sbjct: 185 LAIMEKHFSAVTSIALSEDGLTLFSA---GRDKVVNLWDL 221
>AT4G32990.1 | Symbols: | nucleotide binding |
chr4:15920230-15922658 FORWARD
Length = 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 39/167 (23%)
Query: 264 KPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFD--------IRKINTALHTFD- 314
+ VQ + H V +A+NP + V+A+ S DKTV++++ K+ L +FD
Sbjct: 11 EEVQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDG 70
Query: 315 --C-----------------HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT 355
C H+ EV V WN ++LA+C + + +W++
Sbjct: 71 NTCVWENFATDSESVSVLRGHESEVKSVSWNASG-SLLATCGRDKSVWIWEIQ------- 122
Query: 356 PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIW 402
PE ED + + + GH+ + W+P D V+ S + DN ++IW
Sbjct: 123 PE--EDDEFDTIAVLTGHSEDVKMVLWHPTMD-VLFSCSYDNTIKIW 166
>AT5G63010.1 | Symbols: | WD-40 repeat family protein |
chr5:25281739-25282967 FORWARD
Length = 343
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 18/193 (9%)
Query: 217 LDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR-TPAVTKPVQSVVAHQSE 275
L+ +Q +K H+ + ++ L + L + DD WD+R +PA + Q+ H
Sbjct: 153 LETVQEWKGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMG 212
Query: 276 VNCLAFNPFNEWVVATGSTDKTVKLFDIRKINTALH-TFDCHKEEVFQVGWNPKNETILA 334
V C++ NP + + + TGS D+T++++D R ++ L+ T V+++ +P ++
Sbjct: 213 VCCISSNPSDPYSIFTGSYDETLRVWDTRSVSRPLNETSVSLGGGVWRIKHHPSLSGVVL 272
Query: 335 SCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVA 394
+ C+ + +S DG E+L + H S W +D + VA
Sbjct: 273 AACMHNGFALAKVS------------DGKGEVLESYNKHHSLAYGADWYRGKDQKQSVVA 320
Query: 395 E----DNILQIWQ 403
D +L++W
Sbjct: 321 TCSFYDRLLRVWM 333
>AT1G76260.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:28610363-28612998 FORWARD
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 195 LSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254
++ + ++ I WD+ + KN +++ + H V +V ++L+ E++ S D+ + +
Sbjct: 184 VAATSESSIQFWDLRTMKKNNSIE-----RAH---VRNVDYNLKREHILVSADDESGIHL 235
Query: 255 WDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLF------------- 301
WDLR PVQ + H + NP E ++ + TD V L+
Sbjct: 236 WDLRKTKF--PVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLWFASASSEHKTSES 293
Query: 302 ----DIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMV 344
+++N L+++ +++ V+ + W+ + I AS R+++
Sbjct: 294 PVEASRQRVNPLLNSYTDYEDSVYGLAWSSREPWIFASLSYDGRVVI 340
>AT1G49040.1 | Symbols: SCD1 | SCD1 (STOMATAL CYTOKINESIS-DEFECTIVE
1); protein binding | chr1:18139419-18148826 REVERSE
Length = 1187
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 192 GHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQY 251
G +SGS D + +WD P R + T K H G V ++ R + + GS DD
Sbjct: 868 GFFISGSTDCLVKIWD----PSLRGSELRATLKGHTGTVRAISSD-RGKIVSGS--DDLS 920
Query: 252 LLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIR 304
+++WD +T T+ ++ + H S+V+C+ + V T + D TVK++D+R
Sbjct: 921 VIVWDKQT---TQLLEELKGHDSQVSCVKM--LSGERVLTAAHDGTVKMWDVR 968
>AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein
binding | chr4:16477393-16478769 REVERSE
Length = 315
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 7/164 (4%)
Query: 141 IATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDD 200
+A + + +F S K DGT L GH + + HL++ S D
Sbjct: 60 VACGGLDSVCSIFSLSSTADK---DGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGD 116
Query: 201 AQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260
LWD+ + K + H V V+ + F S D +WD R
Sbjct: 117 QTCILWDVTTGLKTSVFGG-EFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTR-- 173
Query: 261 AVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIR 304
A ++ V++ H+ +VN + F P + + TGS D T +L+DIR
Sbjct: 174 AASRAVRTFHGHEGDVNTVKFFP-DGYRFGTGSDDGTCRLYDIR 216
>AT4G11110.1 | Symbols: SPA2 | SPA2 (SPA1-RELATED 2); protein
binding / signal transducer | chr4:6772163-6776675
FORWARD
Length = 1036
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 19/215 (8%)
Query: 183 GLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYL 242
G+ W+ + + +L S D + LWD+ T A+ F HE V +
Sbjct: 777 GVCWNNYIRNYLASSDYDGIVKLWDVT------TGQAISHFIEHEKRAWSVDFSEACPTK 830
Query: 243 FGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFD 302
S DD + +W++ ++++ + V C+ F+P + ++A GS+D +D
Sbjct: 831 LASGSDDCSVKLWNINERNCLGTIRNI----ANVCCVQFSPQSSHLLAFGSSDFRTYCYD 886
Query: 303 IRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDG 362
+R + T H + V + NET L + L +WDL + +A
Sbjct: 887 LRNLRTPWCILSGHNKAVSYAKF-LDNET-LVTASTDNTLKLWDLKKTTHGGLSTNA--- 941
Query: 363 PPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDN 397
L F GGHT++ +F D IA +E N
Sbjct: 942 -CSLTF--GGHTNE-KNFVGLSTSDGYIACGSETN 972
>AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein
binding | chr4:16477393-16479266 REVERSE
Length = 372
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 7/164 (4%)
Query: 141 IATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDD 200
+A + + +F S K DGT L GH + + HL++ S D
Sbjct: 117 VACGGLDSVCSIFSLSSTADK---DGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGD 173
Query: 201 AQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260
LWD+ + K + H V V+ + F S D +WD R
Sbjct: 174 QTCILWDVTTGLKTSVFGG-EFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTR-- 230
Query: 261 AVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIR 304
A ++ V++ H+ +VN + F P + + TGS D T +L+DIR
Sbjct: 231 AASRAVRTFHGHEGDVNTVKFFP-DGYRFGTGSDDGTCRLYDIR 273
>AT2G26060.1 | Symbols: emb1345 | emb1345 (embryo defective 1345);
nucleotide binding | chr2:11102400-11105127 FORWARD
Length = 352
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 32/250 (12%)
Query: 174 LRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDV 233
L GH E +SW+ L + S D + +W++ + D H V+ V
Sbjct: 114 LEGHENEVKSVSWNA-SGSCLATCSRDKSVWIWEV---LEGNEYDCAAVLTGHTQDVKMV 169
Query: 234 AWHLRHEYLFGSVGDDQYLLIW----DLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVV 289
WH + LF D+ + W D V +S H S V ++FN + +V
Sbjct: 170 QWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMV 229
Query: 290 ATGSTDKTVKLF--DIRKINTA--------LHTFDC-HKEEVFQVGWNPKNETILASCCL 338
T S D T+K++ DI K+ + L T H ++ W+ + +
Sbjct: 230 -TCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDDIIASGAGDN 288
Query: 339 GRRLMVWDLSRIDEEQTPEDAEDGPPELLFI--HGGHTSKISDFSWNPCE-DWVIASVAE 395
RL V + D+ DGP L + + H + ++ W+P E + ++AS ++
Sbjct: 289 AIRLFV---------DSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASD 339
Query: 396 DNILQIWQMA 405
D +++IWQ+A
Sbjct: 340 DGMVKIWQLA 349
>AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein
binding | chr4:16477586-16479266 REVERSE
Length = 347
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 7/164 (4%)
Query: 141 IATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDD 200
+A + + +F S K DGT L GH + + HL++ S D
Sbjct: 122 VACGGLDSVCSIFSLSSTADK---DGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGD 178
Query: 201 AQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260
LWD+ + K + H V V+ + F S D +WD R
Sbjct: 179 QTCILWDVTTGLKTSVFGG-EFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTR-- 235
Query: 261 AVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIR 304
A ++ V++ H+ +VN + F P + + TGS D T +L+DIR
Sbjct: 236 AASRAVRTFHGHEGDVNTVKFFP-DGYRFGTGSDDGTCRLYDIR 278
>AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein
binding | chr4:16477393-16479266 REVERSE
Length = 377
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 7/164 (4%)
Query: 141 IATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDD 200
+A + + +F S K DGT L GH + + HL++ S D
Sbjct: 122 VACGGLDSVCSIFSLSSTADK---DGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGD 178
Query: 201 AQICLWDIDSTPKNRTLDAMQTFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260
LWD+ + K + H V V+ + F S D +WD R
Sbjct: 179 QTCILWDVTTGLKTSVFGG-EFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTR-- 235
Query: 261 AVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDIR 304
A ++ V++ H+ +VN + F P + + TGS D T +L+DIR
Sbjct: 236 AASRAVRTFHGHEGDVNTVKFFP-DGYRFGTGSDDGTCRLYDIR 278