Jatropha Genome Database

JcCA0029371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029371.10 + phase: 0 /pseudo/partial
         (178 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32380.1 | Symbols:  | ribose-phosphate pyrophosphokinase 2 /...   200   4e-52
AT2G35390.1 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /...   199   5e-52
AT2G35390.2 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /...   199   5e-52
AT2G44530.2 | Symbols:  | ribose-phosphate pyrophosphokinase, pu...   198   1e-51
AT2G44530.1 | Symbols:  | ribose-phosphate pyrophosphokinase, pu...   198   1e-51
AT2G35390.3 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /...    89   1e-18

>AT1G32380.1 | Symbols:  | ribose-phosphate pyrophosphokinase 2 /
           phosphoribosyl diphosphate synthetase 2 (PRS2) |
           chr1:11682033-11684229 FORWARD
          Length = 400

 Score =  200 bits (509), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 94/104 (90%), Positives = 100/104 (96%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDVKGKVAVMVDD+IDTAGTI KGAALLH+EGAREVYAC THAVFSPPAIERLSSGL QE
Sbjct: 296 GDVKGKVAVMVDDIIDTAGTIVKGAALLHEEGAREVYACCTHAVFSPPAIERLSSGLLQE 355

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIF 177
           VI+TNT+PVAE+NYFPQLT+LSVANLLGETIWRVHDD SVSSIF
Sbjct: 356 VIVTNTLPVAEKNYFPQLTILSVANLLGETIWRVHDDSSVSSIF 399


>AT2G35390.1 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /
           phosphoribosyl diphosphate synthetase 1 (PRSI) |
           chr2:14895528-14897098 REVERSE
          Length = 352

 Score =  199 bits (507), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 93/104 (89%), Positives = 99/104 (95%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDV+GKVA+MVDDMIDTAGTI KGAALLHQEGAREVYAC THAVFSPPAIERLS GL QE
Sbjct: 248 GDVRGKVAIMVDDMIDTAGTIVKGAALLHQEGAREVYACCTHAVFSPPAIERLSGGLLQE 307

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIF 177
           VI+TNT+PVAE+NYFPQLT+LSVANLLGETIWRVHDD SVSSIF
Sbjct: 308 VIVTNTLPVAEKNYFPQLTILSVANLLGETIWRVHDDSSVSSIF 351


>AT2G35390.2 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /
           phosphoribosyl diphosphate synthetase 1 (PRSI) |
           chr2:14895528-14897581 REVERSE
          Length = 403

 Score =  199 bits (507), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 93/104 (89%), Positives = 99/104 (95%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDV+GKVA+MVDDMIDTAGTI KGAALLHQEGAREVYAC THAVFSPPAIERLS GL QE
Sbjct: 299 GDVRGKVAIMVDDMIDTAGTIVKGAALLHQEGAREVYACCTHAVFSPPAIERLSGGLLQE 358

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIF 177
           VI+TNT+PVAE+NYFPQLT+LSVANLLGETIWRVHDD SVSSIF
Sbjct: 359 VIVTNTLPVAEKNYFPQLTILSVANLLGETIWRVHDDSSVSSIF 402


>AT2G44530.2 | Symbols:  | ribose-phosphate pyrophosphokinase,
           putative / phosphoribosyl diphosphate synthetase,
           putative | chr2:18383732-18385974 FORWARD
          Length = 393

 Score =  198 bits (504), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 92/99 (92%), Positives = 98/99 (98%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDVKGKVA+MVDDMIDTAGTI+KGAALLHQEGAREVYAC+THAVFSPPAI RLSSGLFQE
Sbjct: 283 GDVKGKVAIMVDDMIDTAGTISKGAALLHQEGAREVYACTTHAVFSPPAISRLSSGLFQE 342

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCS 172
           VIITNTIP++E+NYFPQLTVLSVANLLGETIWRVHDDCS
Sbjct: 343 VIITNTIPLSEKNYFPQLTVLSVANLLGETIWRVHDDCS 381


>AT2G44530.1 | Symbols:  | ribose-phosphate pyrophosphokinase,
           putative / phosphoribosyl diphosphate synthetase,
           putative | chr2:18383732-18385974 FORWARD
          Length = 394

 Score =  198 bits (504), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 92/99 (92%), Positives = 98/99 (98%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDVKGKVA+MVDDMIDTAGTI+KGAALLHQEGAREVYAC+THAVFSPPAI RLSSGLFQE
Sbjct: 284 GDVKGKVAIMVDDMIDTAGTISKGAALLHQEGAREVYACTTHAVFSPPAISRLSSGLFQE 343

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCS 172
           VIITNTIP++E+NYFPQLTVLSVANLLGETIWRVHDDCS
Sbjct: 344 VIITNTIPLSEKNYFPQLTVLSVANLLGETIWRVHDDCS 382


>AT2G35390.3 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /
           phosphoribosyl diphosphate synthetase 1 (PRSI) |
           chr2:14895808-14897581 REVERSE
          Length = 344

 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/45 (91%), Positives = 43/45 (95%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVF 118
           GDV+GKVA+MVDDMIDTAGTI KGAALLHQEGAREVYAC THAVF
Sbjct: 299 GDVRGKVAIMVDDMIDTAGTIVKGAALLHQEGAREVYACCTHAVF 343