Jatropha Genome Database

JcCA0029141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029141.10 - phase: 0 /partial
         (635 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G18240.1 | Symbols: ATSS4, SSIV, SS4 | ATSS4; transferase, tr...   848   0.0  
AT5G65685.1 | Symbols:  | soluble glycogen synthase-related | ch...   242   4e-64
AT1G11720.1 | Symbols: ATSS3 | ATSS3 (starch synthase 3); starch...   159   8e-39
AT1G32900.1 | Symbols:  | starch synthase, putative | chr1:11920...    57   5e-08
AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | SSI1 (SUPPRESSOR OF SA...    51   3e-06

>AT4G18240.1 | Symbols: ATSS4, SSIV, SS4 | ATSS4; transferase,
           transferring glycosyl groups | chr4:10082221-10087044
           FORWARD
          Length = 1040

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/627 (66%), Positives = 506/627 (80%), Gaps = 15/627 (2%)

Query: 11  DGGEKLSSI--PDEMKPSGLKIEGGEQFSHVRLEDLIGMIRNAEKNILLLNQARVHALED 68
           D G+ L +I  P+  K   L    GEQ S  +  +L+ MIR+AEKNIL L++AR  AL+D
Sbjct: 153 DDGKNLDNITVPEVAKALSLNKSEGEQISDGQFGELMTMIRSAEKNILRLDEARATALDD 212

Query: 69  LERILAEKEILQGEINVLEMRLAETDARMKVAAQEKIHVELMGDQLEKLKNELTYRGENQ 128
           L +IL++KE LQGEINVLEM+L+ETD R+K AAQEK HVEL+ +QLEKL++E+    E+ 
Sbjct: 213 LNKILSDKEALQGEINVLEMKLSETDERIKTAAQEKAHVELLEEQLEKLRHEMISPIESD 272

Query: 129 DKLLNEEPSLLQNSSVDYLSEELNLLRAENSSLKNDMEALKRELSDVKDTDERVITLEKE 188
             +L              LS+EL  L+ EN SL+ND+E LK EL  VKDT ERV+ LEKE
Sbjct: 273 GYVLA-------------LSKELETLKLENLSLRNDIEMLKSELDSVKDTGERVVVLEKE 319

Query: 189 RXXXXXXXXXXXXXXXTSQEDVSKLSSLKVECKDLWEKVENLQALLEKATKQADQAILVL 248
                            SQEDVS+LS+LK+EC DLW KVE LQ LL++ATKQA+QA++VL
Sbjct: 320 CSGLESSVKDLESKLSVSQEDVSQLSTLKIECTDLWAKVETLQLLLDRATKQAEQAVIVL 379

Query: 249 QQNQELRKKVDKLEESLEEANVYKLSSEKLQQSNELMQQKIKLLEERLQRSDEEIGSYVQ 308
           QQNQ+LR KVDK+EESL+EANVYK SSEK+QQ NELMQ K+ LLEERL++SD EI SYVQ
Sbjct: 380 QQNQDLRNKVDKIEESLKEANVYKESSEKIQQYNELMQHKVTLLEERLEKSDAEIFSYVQ 439

Query: 309 VYQESVQEFQDTLNTLKEQSKKKALDQPVDDMPWEFWSRLLLMIDGWVLEEKLSKENAKL 368
           +YQES++EFQ+TL +LKE+SKKK+ D+PVDDMPW++WSRLLL +DGW+LE+K++  +A L
Sbjct: 440 LYQESIKEFQETLESLKEESKKKSRDEPVDDMPWDYWSRLLLTVDGWLLEKKIASNDADL 499

Query: 369 LRDMVWKRDRRVCDAYLECREKNDREAVSTFLKLTSSPASSGLHVIHIAAEMAPVAKXXX 428
           LRDMVWK+DRR+ D Y++ ++KN+R+A+S FLKL SSP SSGL+V+HIAAEMAPVAK   
Sbjct: 500 LRDMVWKKDRRIHDTYIDVKDKNERDAISAFLKLVSSPTSSGLYVVHIAAEMAPVAKVGG 559

Query: 429 XXXXXXXXXKALQKRGHLVEIILPKYDCMQYDGIGNLRALDVVVESYFDGKLYKNKIWVG 488
                    KALQ++GHLVEIILPKYDCMQYD + +LRALD VVESYFDGKLYKNKIW+G
Sbjct: 560 LGDVVAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALDTVVESYFDGKLYKNKIWIG 619

Query: 489 TIEGLPVYFIEPHHPNKFFWRGQFYGEHDDFKRFSFFSRAALELLLQAGKKPDIIHCHDW 548
           T+EGLPV+FIEP HP+KFFWRGQFYGE DDF+RFS+FSRAALELLLQ+GKKPDIIHCHDW
Sbjct: 620 TVEGLPVHFIEPQHPSKFFWRGQFYGEQDDFRRFSYFSRAALELLLQSGKKPDIIHCHDW 679

Query: 549 QTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGTAPASELVSCGLDVQELNRPDRMQDN 608
           QTAFVAPLYWD+YAPKGL+SARICFTCHNFEYQGTA ASEL SCGLDV +LNRPDRMQD+
Sbjct: 680 QTAFVAPLYWDLYAPKGLDSARICFTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDH 739

Query: 609 SAHDRINPVKGAVVFSNIVTTVSPTYA 635
           S+ DR+NPVKGA++FSNIVTTVSPTYA
Sbjct: 740 SSGDRVNPVKGAIIFSNIVTTVSPTYA 766


>AT5G65685.1 | Symbols:  | soluble glycogen synthase-related |
           chr5:26273252-26275864 REVERSE
          Length = 460

 Score =  242 bits (618), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 116/292 (39%), Positives = 178/292 (60%), Gaps = 2/292 (0%)

Query: 344 FWSRLLLMIDGWVLEEKLSKENAKLLRDMVWKRDRRVCDAYLECREKNDREAVSTFLKLT 403
           FW  LLL ID  V+   ++ E A  +R +V + +  +    L+  ++ D E ++   + T
Sbjct: 125 FW-ELLLRIDSMVINGLVNIEEASSMRKLVKEHEANISVFPLDVLQQGDAEILAELRRFT 183

Query: 404 SSPASSGLHVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYDCMQYDGIG 463
           +    +GLHVIHI  EMAP+               ALQ+ G++VE+ILPKY  +  D I 
Sbjct: 184 NKGKRNGLHVIHICTEMAPLVSVGPLASYITGLSCALQEEGYMVEVILPKYSTLDLDEIE 243

Query: 464 NLRALDVVVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHPNKFFWRGQFYGEHDDFKRFS 523
            LR ++    SYFDG+L+ N+IW G + G+ V  I+P + +  F R + YG  DDF RF+
Sbjct: 244 GLREIEADAYSYFDGQLHANRIWNGVVSGIGVTLIQPVYYSSMFSRDKVYGYQDDFDRFA 303

Query: 524 FFSRAALELLLQAGKKPDIIHCHDWQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGT 583
           +FSRA+L+ + ++GK+PD++H H+WQTA V PL+WD++  +GL   RI  TC +F+ +G 
Sbjct: 304 YFSRASLDYIAKSGKQPDVLHIHNWQTAIVGPLFWDVFVNQGLEGTRILLTCQDFD-KGL 362

Query: 584 APASELVSCGLDVQELNRPDRMQDNSAHDRINPVKGAVVFSNIVTTVSPTYA 635
            P  +L  CGLD  EL+R DR+QDN+    +N +KG VV+SN V  +S +++
Sbjct: 363 VPPEKLELCGLDPAELHRLDRLQDNTNPHFVNILKGGVVYSNKVVIMSSSHS 414


>AT1G11720.1 | Symbols: ATSS3 | ATSS3 (starch synthase 3); starch
           synthase/ transferase, transferring glycosyl groups |
           chr1:3952511-3956840 FORWARD
          Length = 1025

 Score =  159 bits (401), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 117/225 (52%), Gaps = 39/225 (17%)

Query: 411 LHVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYDCMQYDGIGNLRALDV 470
           LH++HIA EMAP+AK            +A+Q+  H V+I+ PKYDC++++ + +L+    
Sbjct: 577 LHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHNVDIVFPKYDCIKHNFVKDLQ---- 632

Query: 471 VVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHPNKFFWRGQFYGEHDDFKRFSFFSRAAL 530
              SY  G   + K+W G +EGL VYF++P   N  F RG  YG  DD  RF FF  AAL
Sbjct: 633 FNRSYHWGGT-EIKVWHGKVEGLSVYFLDPQ--NGLFQRGCVYGCADDAGRFGFFCHAAL 689

Query: 531 ELLLQAGKKPDIIHCHDWQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGTAPASELV 590
           E LLQ G  PDI+HCHDW +A V+ L+ D Y   GL   RI FT HN E+          
Sbjct: 690 EFLLQGGFHPDILHCHDWSSAPVSWLFKDHYTQYGLIKTRIVFTIHNLEFGA-------- 741

Query: 591 SCGLDVQELNRPDRMQDNSAHDRINPVKGAVVFSNIVTTVSPTYA 635
                                   N +  A+ F++  TTVSPTYA
Sbjct: 742 ------------------------NAIGKAMTFADKATTVSPTYA 762


>AT1G32900.1 | Symbols:  | starch synthase, putative |
           chr1:11920582-11923506 REVERSE
          Length = 610

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 108/255 (42%), Gaps = 39/255 (15%)

Query: 410 GLHVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYDCMQYDGIGNLRALD 469
           G+ VI I AE+ P +K             AL  RGH V  I P+YD  QY       A D
Sbjct: 83  GMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTICPRYD--QYK-----DAWD 135

Query: 470 --VVVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHPNKFFWR------GQFYGE------ 515
             VVV+     K+   + +     G+   F++  HP  F  +       + YG       
Sbjct: 136 TCVVVQIKVGDKVENVRFFHCYKRGVDRVFVD--HP-IFLAKVVGKTGSKIYGPITGVDY 192

Query: 516 HDDFKRFSFFSRAALE----LLLQAGK------KPDIIH-CHDWQTAFVAPLYWDIYAPK 564
           +D+  RFS   +AALE    L L + K        D++   +DW TA +      +Y  +
Sbjct: 193 NDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDWHTALLPCYLKSMYQSR 252

Query: 565 GLN-SARICFTCHNFEYQGTAPASELVSCGLDV---QELNRPDRMQDNSAHDRINPVKGA 620
           G+  +A++ F  HN  YQG     +     L +      +  D  +      +IN +K A
Sbjct: 253 GVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDGYEKPVKGRKINWMKAA 312

Query: 621 VVFSNIVTTVSPTYA 635
           ++ ++ V TVSP YA
Sbjct: 313 ILEAHRVLTVSPYYA 327


>AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | SSI1 (SUPPRESSOR OF
           SALICYLIC ACID INSENSITIVITY 1); starch synthase/
           transferase, transferring glycosyl groups |
           chr5:8266934-8270860 FORWARD
          Length = 652

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 99/254 (38%), Gaps = 42/254 (16%)

Query: 412 HVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYDCMQYDGIGNLRALDV- 470
           +++ + +E AP +K             AL  RGH V +I P+Y           RA D+ 
Sbjct: 143 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 202

Query: 471 --VVESYFDGKL-------YKNKI-WVGTIEGLPVYFIEP---HHPNKFFW--RGQFYGE 515
             V  + F G         Y++ + WV         F++    H P   +   +G F   
Sbjct: 203 IRVTVNCFGGSQEVSFYHEYRDGVDWV---------FVDHKSYHRPGNPYGDSKGAF--- 250

Query: 516 HDDFKRFSFFSRAALE--LLLQAG----KKPDIIHCHDWQTAFVAPLYWDIYAPKGL-NS 568
            D+  RF+    AA E  L+L  G     +  +   +DW    V  L    Y P G+   
Sbjct: 251 GDNQFRFTLLCHAACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKD 310

Query: 569 ARICFTCHNFEYQGTAPASELVSCGLDVQELNRPD-------RMQDNSAHDRINPVKGAV 621
           AR     HN  +QG  PA+   + GL  +             R       + +N +KGA+
Sbjct: 311 ARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAI 370

Query: 622 VFSNIVTTVSPTYA 635
           V S+ + TVS  YA
Sbjct: 371 VTSDRIITVSQGYA 384