Jatropha Genome Database

JcCA0028391.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0028391.20 + phase: 1 /TE
         (1339 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   333   4e-91
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   136   1e-31
AT5G53670.1 | Symbols:  | unknown protein | chr5:21796997-217977...    99   2e-20
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    88   3e-17
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    59   2e-08

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  333 bits (854), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 177/468 (37%), Positives = 276/468 (58%), Gaps = 15/468 (3%)

Query: 847  WIEAMNEEYKSMQDNQVWDLVQLPEGKKPIGCKWIFKTKRDSQDNVERYKARLVAKGFTQ 906
            W  AM++E  +M+    W++  LP  KKPIGCKW++K K +S   +ERYKARLVAKG+TQ
Sbjct: 98   WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157

Query: 907  KEGIDYIETVSLVSSKDSFRTIMALVANLDLELHQMDVKTAFLNGDIDETIYMVQPENFV 966
            +EGID+IET S V    S + I+A+ A  +  LHQ+D+  AFLNGD+DE IYM  P  + 
Sbjct: 158  QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217

Query: 967  I--GD--PKHLVCKLKKSIYGLKQASRQWYFKFNQVIVSFGFEANAVENCVYHKFSGSRF 1022
               GD  P + VC LKKSIYGLKQASRQW+ KF+  ++ FGF  +  ++  + K + + F
Sbjct: 218  ARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLF 277

Query: 1023 IFLVLYVDDILLATNCKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRDSSRGILGLSQ 1082
            + +++YVDDI++ +N    + E K  L   F+++DLG   + LG++I R S+ GI  + Q
Sbjct: 278  LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIAR-SAAGI-NICQ 335

Query: 1083 KSYIDKVLKRFGMQNSRPLDTPIAKGDKFSNQQCPKSELEIQEMQKVPYASVVGSLMYVQ 1142
            + Y   +L   G+   +P   P+     FS      S  +  + +   Y  ++G LMY+Q
Sbjct: 336  RKYALDLLDETGLLGCKPSSVPMDPSVTFSAH----SGGDFVDAKA--YRRLIGRLMYLQ 389

Query: 1143 VCTRPDISFIVGMLGRYLSNPGMDYWKAAKRVMRYLQRTKGHMLTYRRSDQLEIIGYTDS 1202
            + TR DISF V  L ++   P + + +A  +++ Y++ T G  L Y    ++++  ++D+
Sbjct: 390  I-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448

Query: 1203 DFAGCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQAIWLRNLV 1262
             F  C+D+R+ST+GY   L    ISWKS KQ +V+ S+ EAE+ A   A+++ +WL    
Sbjct: 449  SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 508

Query: 1263 TGLRVVGGIKRPLKLYCDSRSAVLFXXXXXXXXXXKHIEIKFLAVKER 1310
              L++   + +P  L+CD+ +A+            KHIE    +V+ER
Sbjct: 509  RELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  136 bits (342), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 127/237 (53%), Gaps = 14/237 (5%)

Query: 1023 IFLVLYVDDILLATNCKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRDSSRGILGLSQ 1082
            ++L+LYVDDILL  +   LL+     LS  F MKDLG   + LGIQI    S   L LSQ
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58

Query: 1083 KSYIDKVLKRFGMQNSRPLDTPIAK--GDKFSNQQCPKSELEIQEMQKVPYASVVGSLMY 1140
              Y +++L   GM + +P+ TP+        S  + P             + S+VG+L Y
Sbjct: 59   TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPS---------DFRSIVGALQY 109

Query: 1141 VQVCTRPDISFIVGMLGRYLSNPGMDYWKAAKRVMRYLQRTKGHMLTYRRSDQLEIIGYT 1200
            + + TRPDIS+ V ++ + +  P +  +   KRV+RY++ T  H L   ++ +L +  + 
Sbjct: 110  LTL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFC 168

Query: 1201 DSDFAGCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQAIW 1257
            DSD+AGC  +R+ST+G+   L    ISW + +Q  V+ S+ E E+ A    + +  W
Sbjct: 169  DSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>AT5G53670.1 | Symbols:  | unknown protein | chr5:21796997-21797731
           FORWARD
          Length = 244

 Score = 99.4 bits (246), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 25/209 (11%)

Query: 5   NPDCVPKLEGSNFESWKSDIMIFLGCMDLDLAFRMDEPAPLTDTSTDIQRVQYKKWERSN 64
           N D +P L GSNF  WK  +++ L  MDLDL+   + P+            + K W+RSN
Sbjct: 34  NVDSIPMLSGSNFSEWKEHLLLVLALMDLDLSLMTERPSSPK---------ELKHWDRSN 84

Query: 65  RLGLMIMQKGVPEHVRDSVSAEKNNAQNYLAELERAYVKNDKAEVGTLLGKLTSMKFAGN 124
           R+ +MIM+  +P+  R  V  +   A+++LA LE  + KN++AE   +  + +SM +  N
Sbjct: 85  RVSIMIMKIRIPQGFRGVVPDDVTTAKDFLASLENFFAKNEEAERSRVQAESSSMSYIEN 144

Query: 125 GGVREHILSMSQIAKRLKALGMA---LPDDLLVHLVMNSLPSQYGQIRTFYNCQPNK--- 178
             VRE I+ M  +  + K LG+      D +L H  +  LP QY  ++  Y+C   K   
Sbjct: 145 ENVRELIMRMKTLGAKRKRLGINNIFSNDMMLAHCAVKMLPLQYISLKNVYSCLEGKFVN 204

Query: 179 ----------WTLNELISHCVDEEEKMNS 197
                     W+  ELIS C  EEE + +
Sbjct: 205 ENGRWHTGEIWSTKELISRCDMEEETLRT 233


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 88.2 bits (217), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 3/110 (2%)

Query: 828 IDDDPVSFYHAMXSSDSHKWIEAMNEEYKSMQDNQVWDLVQLPEGKKPIGCKWIFKTKRD 887
           I  +P S   A+       W +AM EE  ++  N+ W LV  P  +  +GCKW+FKTK  
Sbjct: 24  IKKEPKSVIFAL---KDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLH 80

Query: 888 SQDNVERYKARLVAKGFTQKEGIDYIETVSLVSSKDSFRTIMALVANLDL 937
           S   ++R KARLVAKGF Q+EGI ++ET S V    + RTI+ +   L++
Sbjct: 81  SDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
            chrM:68918-69253 REVERSE
          Length = 111

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 1/83 (1%)

Query: 1139 MYVQVCTRPDISFIVGMLGRYLSNPGMDYWKAAKRVMRYLQRTKGHMLTYRRSDQLEIIG 1198
            MY+ + TRPD++F V  L ++ S       +A  +V+ Y++ T G  L Y  +  L++  
Sbjct: 1    MYLTI-TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59

Query: 1199 YTDSDFAGCQDSRKSTSGYIFLL 1221
            + DSD+A C D+R+S +G+  L+
Sbjct: 60   FADSDWASCPDTRRSVTGFCSLV 82