Jatropha Genome Database

JcCA0028391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0028391.10 + phase: 0 
         (77 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G02100.1 | Symbols: LCR69, PDF2.2 | LCR69 (LOW-MOLECULAR-WEIG...    96   5e-21
AT2G02130.1 | Symbols: PDF2.3, LCR68 | LCR68 (LOW-MOLECULAR-WEIG...    88   8e-19
AT2G02120.1 | Symbols: PDF2.1, LCR70 | PDF2.1; peptidase inhibit...    86   5e-18
AT1G61070.1 | Symbols: LCR66, PDF2.4 | LCR66 (LOW-MOLECULAR-WEIG...    69   4e-13
AT2G02140.1 | Symbols: LCR72, PDF2.6 | LCR72 (LOW-MOLECULAR-WEIG...    67   3e-12
AT5G63660.1 | Symbols: LCR74, PDF2.5 | PDF2.5 | chr5:25485692-25...    63   3e-11
AT2G02147.1 | Symbols: LCR73 | LCR73 (Low-molecular-weight cyste...    58   1e-09
AT2G31957.1 | Symbols: LCR75, LCR79 | LCR75 (LOW-MOLECULAR-WEIGH...    53   5e-08

>AT2G02100.1 | Symbols: LCR69, PDF2.2 | LCR69
          (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69); peptidase
          inhibitor | chr2:528397-528885 FORWARD
          Length = 77

 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 51/77 (66%)

Query: 1  MKCPMRLFSTXXXXXXXXXATETGPMVAEARTCESLSHRFKGICVRNSNCAAICQTEGFQ 60
          MK  MRL S          AT  GP+  EARTCES SHRFKG CV  SNCA +C  EGF 
Sbjct: 1  MKLSMRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFV 60

Query: 61 GGHCRGLRRRCFCTKHC 77
          GG+CRG RRRCFCT+HC
Sbjct: 61 GGNCRGFRRRCFCTRHC 77


>AT2G02130.1 | Symbols: PDF2.3, LCR68 | LCR68
          (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 68); peptidase
          inhibitor | chr2:540071-540407 FORWARD
          Length = 77

 Score = 88.2 bits (217), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 48/77 (62%)

Query: 1  MKCPMRLFSTXXXXXXXXXATETGPMVAEARTCESLSHRFKGICVRNSNCAAICQTEGFQ 60
          MK  +R  S          AT  GP+  EARTCES SHRFKG CV   NCA +C  EGF 
Sbjct: 1  MKLSVRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFG 60

Query: 61 GGHCRGLRRRCFCTKHC 77
          GG CRG RRRC+CT+HC
Sbjct: 61 GGKCRGFRRRCYCTRHC 77


>AT2G02120.1 | Symbols: PDF2.1, LCR70 | PDF2.1; peptidase
          inhibitor | chr2:538319-538842 FORWARD
          Length = 77

 Score = 85.9 bits (211), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 48/77 (62%)

Query: 1  MKCPMRLFSTXXXXXXXXXATETGPMVAEARTCESLSHRFKGICVRNSNCAAICQTEGFQ 60
          MK  MRL S          AT  GP+  EARTC S S RFKG CV ++NC  +C  EGF 
Sbjct: 1  MKFSMRLISAVLFLVMIFVATGMGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNEGFP 60

Query: 61 GGHCRGLRRRCFCTKHC 77
          GG CRG RRRCFCT++C
Sbjct: 61 GGDCRGFRRRCFCTRNC 77


>AT1G61070.1 | Symbols: LCR66, PDF2.4 | LCR66
          (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 66) |
          chr1:22492020-22492470 REVERSE
          Length = 76

 Score = 69.3 bits (168), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 39/58 (67%)

Query: 20 ATETGPMVAEARTCESLSHRFKGICVRNSNCAAICQTEGFQGGHCRGLRRRCFCTKHC 77
          AT  G +  EARTCE+ S+ F G C+ +SNCA +C  EGF  G CRG RRRC CT+ C
Sbjct: 19 ATVMGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNEGFSDGDCRGFRRRCLCTRPC 76


>AT2G02140.1 | Symbols: LCR72, PDF2.6 | LCR72
          (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 72); peptidase
          inhibitor | chr2:544755-545169 FORWARD
          Length = 73

 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 4/77 (5%)

Query: 1  MKCPMRLFSTXXXXXXXXXATETGPMVAEARTCESLSHRFKGICVRNSNCAAICQTEGFQ 60
          MK  +RL S          AT  GP+  EARTCES S++F+G+C+ + +CA  C +EGF 
Sbjct: 1  MKLSLRLISALLMSVMLLFATGMGPV--EARTCESPSNKFQGVCLNSQSCAKACPSEGFS 58

Query: 61 GGHCRGLRRRCFCTKHC 77
          GG C  L  RC+C+K C
Sbjct: 59 GGRCSSL--RCYCSKAC 73


>AT5G63660.1 | Symbols: LCR74, PDF2.5 | PDF2.5 |
          chr5:25485692-25486062 FORWARD
          Length = 73

 Score = 63.2 bits (152), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 34/50 (68%)

Query: 28 AEARTCESLSHRFKGICVRNSNCAAICQTEGFQGGHCRGLRRRCFCTKHC 77
           E RTC+S SH FK +C  N NCA +C+ EGF GG C G  RRC+CT+ C
Sbjct: 24 GEGRTCQSKSHHFKYMCTSNHNCAIVCRNEGFSGGRCHGFHRRCYCTRLC 73


>AT2G02147.1 | Symbols: LCR73 | LCR73 (Low-molecular-weight
          cysteine-rich 73) | chr2:546664-547026 FORWARD
          Length = 80

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 1  MKCPMRLFSTXXXXXXXXXATETGPMVAEARTCESLSHRFKGICVRNSNCAAICQT-EGF 59
          MK  +R  S          AT       + + C++ S RF G+C+  +NCA ICQ  E F
Sbjct: 1  MKLSLRFLSVLLLIAFMVLATTAEVSPLDNKICKTRSDRFSGVCISTNNCAIICQQFEHF 60

Query: 60 QGGHCR--GLRRRCFCTKHC 77
           GGHC   G  RRC CTK C
Sbjct: 61 DGGHCEFDGAFRRCMCTKQC 80


>AT2G31957.1 | Symbols: LCR75, LCR79 | LCR75 (LOW-MOLECULAR-WEIGHT
          CYSTEINE-RICH 75) | chr2:13587709-13588187 FORWARD
          Length = 82

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 33/52 (63%)

Query: 26 MVAEARTCESLSHRFKGICVRNSNCAAICQTEGFQGGHCRGLRRRCFCTKHC 77
          MV   + CE+ S  +KG+C++  NC  +C +EGF  G C+G  R+C C+K C
Sbjct: 26 MVEGQQMCEAKSLDWKGMCLKWRNCRQVCISEGFTDGRCKGFTRKCICSKPC 77