Jatropha Genome Database
- JcCA0028051.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0028051.10 - phase: 0 /partial
(280 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 1e-51
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 4e-23
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 103 1e-22
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 100 1e-21
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 99 2e-21
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 98 6e-21
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 97 1e-20
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 2e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 3e-20
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 7e-20
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 9e-20
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 94 1e-19
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 2e-19
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 93 2e-19
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 2e-19
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 2e-19
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 2e-19
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 2e-19
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 3e-19
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 3e-19
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 92 3e-19
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 3e-19
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 4e-19
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 4e-19
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 4e-19
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 92 4e-19
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 92 4e-19
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 92 4e-19
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 8e-19
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 1e-18
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 1e-18
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 1e-18
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 1e-18
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 1e-18
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 2e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 3e-18
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 5e-18
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 88 5e-18
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 5e-18
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 7e-18
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 7e-18
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 7e-18
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 7e-18
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 87 9e-18
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 86 2e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 3e-17
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 3e-17
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 86 3e-17
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 85 4e-17
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 5e-17
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 85 5e-17
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 9e-17
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 9e-17
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 1e-16
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 83 2e-16
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 82 3e-16
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 82 5e-16
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 81 8e-16
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 8e-16
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 1e-15
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 1e-15
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 1e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 1e-15
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 1e-15
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 3e-15
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 3e-15
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 3e-15
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 4e-15
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 5e-15
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 1e-14
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 1e-14
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 77 1e-14
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 1e-14
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 76 2e-14
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 3e-14
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 4e-14
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 75 6e-14
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 75 7e-14
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 8e-14
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 9e-14
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 9e-14
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 2e-13
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 2e-13
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 72 3e-13
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 3e-13
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 3e-13
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 4e-13
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 4e-13
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 72 5e-13
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 5e-13
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 5e-13
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 6e-13
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 8e-13
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 9e-13
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 2e-12
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 69 3e-12
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 4e-12
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 4e-12
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 4e-12
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 4e-12
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 6e-12
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 7e-12
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 7e-12
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 68 7e-12
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 67 1e-11
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 2e-11
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 2e-11
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 2e-11
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 4e-11
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 65 4e-11
AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 4e-11
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 65 4e-11
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 4e-11
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 65 5e-11
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 65 6e-11
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 7e-11
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 64 7e-11
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 8e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 64 8e-11
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 64 9e-11
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 64 2e-10
AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat... 63 2e-10
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 3e-10
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 62 4e-10
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 5e-10
AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 8e-10
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 9e-10
AT5G67570.1 | Symbols: DG1, EMB1408 | DG1 (DELAYED GREENING 1) |... 61 9e-10
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 9e-10
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 9e-10
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 61 1e-09
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 1e-09
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 1e-09
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 1e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 1e-09
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 1e-09
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 1e-09
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 1e-09
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 2e-09
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 60 2e-09
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT1G30610.1 | Symbols: emb2279 | emb2279 (embryo defective 2279)... 60 2e-09
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 60 2e-09
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 59 2e-09
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 59 2e-09
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 3e-09
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 59 5e-09
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 6e-09
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 6e-09
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 7e-09
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 7e-09
AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 8e-09
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 8e-09
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 57 1e-08
AT5G27300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 1e-08
AT5G27300.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 1e-08
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 57 2e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 56 3e-08
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 55 3e-08
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 55 7e-08
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 8e-08
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 8e-08
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 8e-08
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 9e-08
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 54 1e-07
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 52 3e-07
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 3e-07
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 52 3e-07
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 4e-07
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 4e-07
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 4e-07
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 4e-07
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 52 5e-07
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 52 5e-07
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 52 6e-07
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 52 6e-07
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 8e-07
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 8e-07
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 9e-07
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 9e-07
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 1e-06
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 1e-06
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 1e-06
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 1e-06
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 1e-06
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 50 1e-06
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT4G14190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 3e-06
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 3e-06
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 3e-06
AT1G15480.1 | Symbols: | DNA binding | chr1:5318307-5320422 FOR... 49 3e-06
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 4e-06
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 4e-06
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
AT1G80270.3 | Symbols: | DNA-binding protein, putative | chr1:3... 48 5e-06
AT1G80270.2 | Symbols: | DNA-binding protein, putative | chr1:3... 48 5e-06
AT1G80270.1 | Symbols: | DNA-binding protein, putative | chr1:3... 48 5e-06
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 5e-06
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 48 6e-06
AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 6e-06
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 6e-06
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 9e-06
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/283 (42%), Positives = 167/283 (59%), Gaps = 7/283 (2%)
Query: 1 MDKRVRFISKFSLLATNKHKNLIFS---RRLSSAPTHSFEQTPQSENPPSFSKDYERCEQ 57
M R+R +S+ S AT K + + + RRL SA T ++ + PP+ + E+
Sbjct: 1 MVTRLRLVSRSSRYATVKFTDSVSACSCRRLFSASTDPEPESQPEQAPPTNPVTGD--EK 58
Query: 58 VNKLKDLLEQGCTDAAYXXXXXXXXXXXXXXXXXXXXXXXXA-STPLLQLVFSDLLFSVC 116
+ L+ LL+Q + A + S+P L+ FS LL SV
Sbjct: 59 LRNLRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVL 118
Query: 117 C-ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPD 175
ESKM+SEA +L+ +R +G +P+ SL +LL LV KQF I +F+ I +S FRP
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 176 KMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD 235
K YGKA+QAAVKL DV KG+EL M I P+VFIYNVLI GLCK +R+ DAE+LFD
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 236 EMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
EM R+L+ S +TYN+LIDGYCK G +K+F +RERMK +++E
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE 281
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE + A + + ++ G P++ + N+L+ +FDK ++ E++D+G P+
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 177 MTYGKAVQAAVKLGDVNKGIELLES------MTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
++YG + + KG +LLE+ M RG+ P V IYN+LI G C + +I DA
Sbjct: 495 VSYGTLINC------LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ EM K+ + + VTYN+LIDG G++ +A +L
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L CC + +A + + G L + N L+ L + + +L +EI
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G +PD TY + G+V + I L E M + GI+P + Y++LI LC + I
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIEL 651
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
E+LF EM L + YN ++ Y G+++KAFNL+++M ++++ ++
Sbjct: 652 TERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLD 699
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 103 LLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
L L+ + L C++ ++ ++ ++ D P+L + N LL+ L +
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+ E++D GF PD T+ + + E+ G++ N + ++L+ LC
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
KE +I AE++ + LV + V YN++IDGYC+ G++ A RMK E +E
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-----RMKIEAME 416
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ + EL++ ++ D +P++ N+L+ L K+ + +LF E+ P +TY
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ K G+ K ++ E M I P++ +N L+ GL K + DAE + EM
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
V T++ L DGY + + A + E V+MN
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 132 IRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGD 191
+ + G P + N L+R + + + + +++ G P TY + + +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 192 VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
+K ++L+ M G PNV Y LI LCK ++ +A+ + +M R + YN
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 252 LIDGYCKVGEVDKAFNLRERMKKENVEMN 280
LIDG C G+++ AF + M K+ +E+N
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELN 563
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+ ++LL +L + +K E+ G P+++ Y + + GD+ +E+M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
K+G++P+ YN LI C+ + +AEK ++M + + S TYN LI GY + E
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 263 DKAFNLRERMK 273
DK F++ + M+
Sbjct: 476 DKCFDILKEME 486
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
LY ++R G P L + ++L+ SL + + LF E+ +PD + Y +
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYA 676
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
GD+ K L + M ++ I + YN LI G K ++ + L DEM R++
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD 736
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMKKE 275
TYN ++ G+C+V + A+ M+++
Sbjct: 737 TYNIIVKGHCEVKDYMSAYVWYREMQEK 764
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + EA Y + G + +L+ L + D E+F E++ G PD
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+YG + KLG++ K + + M + G+ PNV IYN+L+GG C+ I A++L DE
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
M + L + VTY ++IDGYCK G++ +AF L + MK
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ +A E++ +R G P + S +L+ K +F E+ + G P+ + Y
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + G++ K ELL+ M+ +G+ PN Y +I G CK + +A +LFDEM +
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
LV + Y +L+DG C++ +V++A + KK
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK 760
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 159 KVIEL---FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
KVIE + + D G D TY + K V+ E+ M +GI P+VF Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
VLI G K + A +FDEM + L + + YN L+ G+C+ GE++KA L + M +
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 276 NVEMN 280
+ N
Sbjct: 692 GLHPN 696
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Query: 115 VCCESK--MLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGF 172
+C SK ++ +A L+ + G P + L+ K + EL +E++
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK 232
TYG V+ GD++ +++ M G RPNV IY LI + R GDA +
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 233 LFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+ EM ++ + YNSLI G K +D+A
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALG--SLNMLLRSLVDFKQFDKVIELFMEI 167
D+L C+ K L +A L L+ D +L + ++L+ L+ + D L E+
Sbjct: 281 DVLIDGLCKIKRLEDAKSL--LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
G Y + K G + K L + M G+ P Y LI G C+E+ +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+L EM KR +V S TY +++ G C G++D A+N+ + M
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
++K + EA + +G P + + ++ +F + E+++ G P+K+
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
+ K G V + SM +GI + Y VL+ GL K ++ DAE++F EM
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ + +Y LI+G+ K+G + KA ++ + M +E + N
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + ++L+ L K+ + L +E+ G D TY + +K + +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
L+ M GI ++Y+ I + KE + A+ LFD M L+ Y SLI+G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 256 YCKVGEVDKAFNLRERMKKENV 277
YC+ V + + L MKK N+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNI 413
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 38/194 (19%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ +A+ ++ + +G P + NMLL + +K EL E+ G P+ +TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD------ 235
+ K GD+ + L + M +G+ P+ F+Y L+ G C+ + A +F
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 236 ------------------------EMYKRKLVGS--------TVTYNSLIDGYCKVGEVD 263
E+ R + GS VTYN +ID CK G ++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 264 KAFNLRERMKKENV 277
A L +M+ N+
Sbjct: 823 AAKELFHQMQNANL 836
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C K + + EL +++ + + +++ + D + E+ SG RP+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y ++ ++ + +L+ M ++GI P++F YN LI GL K +R+ +A E
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M + L + TY + I GY + E A + M++ V
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C S L A + + G P + L+++ + +F + + E+++ G PD
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
Y + K +++ L M + G++PN F Y I G + A+K E
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M + ++ + V LI+ YCK G+V +A + M + +
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 82/216 (37%), Gaps = 40/216 (18%)
Query: 101 TPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKV 160
TP ++ ++L C S + +A EL + G P + ++ +
Sbjct: 659 TP--NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 161 IELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGI------------------------ 196
LF E++ G PD Y V +L DV + I
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWV 776
Query: 197 --------------ELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
L++ R +PN YN++I LCKE + A++LF +M L
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 243 VGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ + +TY SL++GY K+G + F + + +E
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 135 DGKFPALG-----SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKL 189
DG F G + N+++ L + ELF ++Q++ P +TY + K+
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 190 GDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG----- 244
G + + + GI P+ +Y+V+I KE A L D+M+ + V
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 913
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERM 272
S T +L+ G+ KVGE++ A + E M
Sbjct: 914 SISTCRALLSGFAKVGEMEVAEKVMENM 941
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 21/162 (12%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P L +LL +L+ + + D +++ + + D TY + A + G+V G ++
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 199 L---------------------ESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
L ESM +G+ P + Y+VLI GLCK +R+ DA+ L EM
Sbjct: 244 LFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
+ TY+ LIDG K D A L M + +
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Query: 116 CCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGF--- 172
CC + A ++ + G + N L+ + F + + E+ + D F
Sbjct: 742 CCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 173 -RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
+P+ +TY + K G++ EL M + P V Y L+ G K R +
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
+FDE + + Y+ +I+ + K G KA L ++M +N
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 90/169 (53%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
V + L S C+ + EATEL ++ G P + + N L++ L + +ELF E
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
++ G PD+ TY + + G +++ + +L+ M G +V YN LI G CK +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+AE++FDEM + ++VTYN+LIDG CK V+ A L ++M E
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
++ C E ++ + + +DG FP + N L+ L IE+ +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G+ PD TY + KLG+V + +E+L+ M R PN YN LI LCKE ++ +A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+L + + ++ T+NSLI G C A L E M+ + E
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Query: 112 LFSVCCESKMLSEATE-LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+ S C+ + EA E L +I RD P + N L+ +L Q ++ EL +
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCS-PNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G PD T+ +Q + +EL E M +G P+ F YN+LI LC + ++ +A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +M S +TYN+LIDG+CK + +A + + M+ V N
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + + N+L+++L Q I + ++ G PD+ T+ +Q ++ GD++
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK-LVGSTVTYNSLID 254
+ + E M + G + NV++ G CKE R+ DA EM + T+N+L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 255 GYCKVGEVDKAFNLRERMKKE 275
G CK G V A + + M +E
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQE 324
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ EA E++ + G + N L+ L ++ + +L ++ G +PDK
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + + GD+ K +++++MT G P++ Y LI GLCK R+ A KL
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
+ + + + YN +I G + + +A NL M ++N
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 145 NMLLRSLVDFKQFDKVIEL-FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N +L LVD K++E+ ++ G +PD T+ ++A + + I +LE M
Sbjct: 158 NRMLNLLVDGNSL-KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 216
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
G+ P+ + ++ G +E + A ++ ++M + S V+ N ++ G+CK G V+
Sbjct: 217 SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 264 KAFNLRERMKKEN 276
A N + M ++
Sbjct: 277 DALNFIQEMSNQD 289
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 85/153 (55%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+LL C + + + + LY + G P + N+L+R+L D D ELF E+ +
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE 175
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G +P++ T+G V+ K G +KG+ELL +M G+ PN IYN ++ C+E R D
Sbjct: 176 KGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDD 235
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
+EK+ ++M + LV VT+NS I CK G+V
Sbjct: 236 SEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKF----PALGSLNMLLRSLVDFKQFDKVI 161
+ F+ + ++C E K+L +A+ ++ + D P + N++L+ +
Sbjct: 253 VTFNSRISALCKEGKVL-DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAK 311
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
LF I+++ +Y +Q V+ G + +L+ MT +GI P+++ YN+L+ GL
Sbjct: 312 TLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGL 371
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
CK + DA+ + M + + VTY L+ GYC VG+VD A +L + M + N
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
EA + + G P++ S N+L+ L + ++ +G PD +TYG +
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
+G V+ LL+ M + PN + N+L+ L K RI +AE+L +M ++
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
TVT N ++DG C GE+DKA + + M+
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 24/193 (12%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ + LL C K + A L + R+ P + N+LL SL + + EL
Sbjct: 397 VTYGCLLHGYCSVGK-VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG------------------- 206
++ + G+ D +T V G+++K IE+++ M G
Sbjct: 456 KMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSL 515
Query: 207 ----IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
P++ Y+ L+ GLCK R +A+ LF EM KL +V YN I +CK G++
Sbjct: 516 IENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKI 575
Query: 263 DKAFNLRERMKKE 275
AF + + M+K+
Sbjct: 576 SSAFRVLKDMEKK 588
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+L+ C+ +L +A L+ IR + +L S N+ L+ LV +F + + ++ D
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G P +Y + KLG ++ ++ M + G+ P+ Y L+ G C ++
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
A+ L EM + + + T N L+ K+G + +A L +M ++
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 138 FPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIE 197
P L + + LL L +F + LF E+ +PD + Y + K G ++
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 198 LLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYC 257
+L+ M K+G ++ YN LI GL + +I + L DEM ++ + + TYN+ I C
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 258 KVGEVDKAFNLRERMKKENVEMN 280
+ +V+ A NL + M ++N+ N
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPN 663
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFP----ALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+ S+ +S + +A + L+R +FP ++ N+LL S + ++ + V L+ ++
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRS--RFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
G P T+ ++A V+ EL + M ++G +PN F + +L+ G CK
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+L + M ++ + V YN+++ +C+ G D + + E+M++E +
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL 248
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L C+ MLS+A + L++R+G P + LL + D L E+
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
+ P+ T + + K+G +++ ELL M ++G + N+++ GLC +
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Query: 230 AEKLF-----------------------DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
A ++ D + + + +TY++L++G CK G +A
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544
Query: 267 NLRERMKKENVE 278
NL M E ++
Sbjct: 545 NLFAEMMGEKLQ 556
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 5/163 (3%)
Query: 119 SKMLSEATELYHLIRRDG-KFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGF---RP 174
+KM E EL++LI + L SL ++ DK F ++ S F +P
Sbjct: 52 AKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVR-SRFPENKP 110
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
Y +++ +K V L + M GI P + +N+LI LC + A +LF
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
DEM ++ + T+ L+ GYCK G DK L M+ V
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGV 213
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 87/177 (49%), Gaps = 5/177 (2%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+++++ ++ S C E + ++ ++ +R +G P + + N + +L + +F
Sbjct: 217 KVIYNTIVSSFCREGRN-DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIF 275
Query: 165 MEIQDSGF----RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGG 220
+++ + RP+ +TY ++ K+G + L ES+ + ++ YN+ + G
Sbjct: 276 SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQG 335
Query: 221 LCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
L + + +AE + +M + + S +YN L+DG CK+G + A + MK+ V
Sbjct: 336 LVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ +S A + + + G +L + N L+ L Q ++ L E+++ G P+
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNI 629
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD 235
TY A+Q + V LL+ M ++ I PNVF + LI CK A+++F+
Sbjct: 630 CTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 1/156 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE + + +AT L + + P + S L+ + FD E+F E S +
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKE 698
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
Y + G + K ELLE++ RG F+Y L+ LCK+ + A + +
Sbjct: 699 GLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M R +IDG K+G +A + ++M
Sbjct: 759 MIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 1/167 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ L+ +CC + A + ++ RD P + + ++ V +F + ++L+
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRD-IVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ PD TY + G V++ ++L+ M +G P+V YN LI G CK +
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
R+ + KLF EM +R LVG T+TYN++I GY + G D A + RM
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ ++++A EL+ + RDG + N L+ L ++ L ++ P+
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + VK G ++ ++L E MT+R + P+VF YN LI GLC R+ +A+++ D
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M + + VTYN+LI+G+CK VD+ L M + +
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + +++ L+ + I+L ++++ GFRPD + Y + + K+G VN
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+EL + M + G+R + YN L+ GLC R DA +L +M R +V + +T+ ++ID
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 256 YCKVGEVDKAFNLRERMKKENVE 278
+ K G+ +A L E M + V+
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVD 276
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
++ L+ +C + + EA ++ L+ G P + + N L+ K+ D+ +LF E+
Sbjct: 282 YNSLINGLCMHGR-VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
G D +TY +Q + G + E+ M RPN+ Y++L+ GLC R+
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRV 397
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
A LF+ M K ++ TYN +I G CK+G V+ A++L
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 82/181 (45%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
S PL +V + S +SK L+H + G L S N+++ L +F
Sbjct: 63 SRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVI 122
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
+ + ++ G+ PD +T + + V I+L+ M + G RP+V IYN +I
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
G CK + DA +LFD M + + VTYNSL+ G C G A L M ++
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 280 N 280
N
Sbjct: 243 N 243
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 113 FSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGF 172
FS S L E +L+ + + P++ + +L + K +D VI LF ++ G
Sbjct: 41 FSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGI 100
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK 232
D +Y + + + ++ M K G P+V + LI G C+ R+ DA
Sbjct: 101 GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 160
Query: 233 LFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
L +M + V YN++IDG CK+G V+ A L +RM+++ V
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A E++ R D + P + + ++LL L + +K + LF +Q S D TY +
Sbjct: 368 AQEIFS--RMDSR-PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 424
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
K+G+V +L S++ +G++P+V Y +I G C++R+ ++ L+ +M + L+
Sbjct: 425 GMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++F+ LL +C E + +SEA EL + G P L +LN L+ L + + L
Sbjct: 159 VIFNTLLNGLCLECR-VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ ++GF+P+++TYG + K G +ELL M +R I+ + Y+++I GLCK+
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +A LF+EM + +TYN+LI G+C G D L M K + N
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Query: 112 LFSVCCESKMLSEATELYH-LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+ +V C+S + A EL + R+ K A+ ++++ L D LF E++
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAV-KYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
GF+ D +TY + G + G +LL M KR I PNV ++VLI KE ++ +A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
++L EM +R + +T+TYNSLIDG+CK +++A + + M
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ L+ C + A L +I+R P + + ++L+ S V + + +L
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS-PNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G P+ +TY + K + + I++++ M +G P++ +N+LI G CK
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
RI D +LF EM R ++ +TVTYN+L+ G+C+ G+++ A L + M V
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ S E K L EA +L + + G P + N L+ + ++ I++
Sbjct: 334 VTFSVLIDSFVKEGK-LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ G PD MT+ + K ++ G+EL M+ RG+ N YN L+ G C+
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ A+KLF EM R++ V+Y L+DG C GE++KA + +++K +E++
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L A L++ + G + + N L+ + ++D +L ++ P+
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + + VK G + + +LL+ M +RGI PN YN LI G CKE R+ +A ++ D
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + +T+N LI+GYCK +D L M V N
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L EA ++ L+ G P + + N+L+ + D +ELF E+ G +
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY VQ + G + +L + M R +RP++ Y +L+ GLC + A ++F +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ K K+ Y +I G C +VD A++L
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
++ + C + LS A I + G P N LL L + + +EL + +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G +P +T V G V+ + L++ M + G +PN Y ++ +CK + A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+L +M +R + V Y+ +IDG CK G +D AFNL M+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 84/181 (46%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
S PL ++ + LFS ++K L + G ++ +L++++ ++
Sbjct: 82 SRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSY 141
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
+I G+ PD + + + V++ +EL++ M + G +P + N L+
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
GLC ++ DA L D M + + VTY +++ CK G+ A L +M++ N+++
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 280 N 280
+
Sbjct: 262 D 262
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
+A +L+ + + P + N L ++ KQ++ V+ L +++ G T +
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
+ ++ + + K G P+ I+N L+ GLC E R+ +A +L D M +
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +T N+L++G C G+V A L +RM + + N
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+S L A +L+ + P + S +LL L D + +K +E+F +I+ S D
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
Y + V+ +L S+ +G++ + YN++I LC++ + A+ LF +
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
M + +TYN LI + + A L E MK
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 1/163 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ +S L+ +C + + EA +++ L+ G + S N L+ K+ + ++LF
Sbjct: 296 VTYSSLINGLCLHDR-IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G + +TY +Q + GDV+K E M GI P+++ YN+L+GGLC
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ A +F++M KR++ VTY ++I G CK G+V++A++L
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++K +++A + + I R G P + + L+ L + ++ L ++ P+
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + A VK G V + EL E M + I P++ Y+ LI GLC RI +A ++FD
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + V+YN+LI+G+CK V+ L M + + N
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C S S+A L + + P + + + LL + V + + ELF E+ PD
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + +++ ++ + M +G +V YN LI G CK +R+ D KLF E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
M +R LV +TVTYN+LI G+ + G+VDKA
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 7/121 (5%)
Query: 158 DKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVL 217
DK++E+ G++PD + Y + + K VN + + + ++GIRPNV Y L
Sbjct: 179 DKMVEI-------GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 218 IGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ GLC R DA +L +M K+K+ + +TY++L+D + K G+V +A L E M + ++
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 278 E 278
+
Sbjct: 292 D 292
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L++A +L+ + + FP++ N LL ++V K++D VI L +++ G R D T+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ V+ + +L M K G P+ L+ G C+ R+ DA L D+M +
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
V YN++ID CK V+ AF+ + ++++ + N
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C +S+A L + G P + + N ++ SL K+ + + F EI+ G RP+
Sbjct: 166 CRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNV 225
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY V + LL M K+ I PNV Y+ L+ K ++ +A++LF+E
Sbjct: 226 VTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 237 MYKRKLVGSTVTYNSLIDGYC---KVGEVDKAFNL 268
M + + VTY+SLI+G C ++ E ++ F+L
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ +S LL + K+L EA EL+ + R P + + + L+ L + D+ ++F
Sbjct: 261 ITYSALLDAFVKNGKVL-EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ G D ++Y + K V G++L M++RG+ N YN LI G +
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ A++ F +M + TYN L+ G C GE++KA + E M+K ++++
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ +A E + + G P + + N+LL L D + +K + +F ++Q D +TY
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++ K G V + L S++ +G++P++ Y ++ GLC + + + E L+ +M +
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 242 LVGSTVT 248
L+ + T
Sbjct: 501 LMKNDCT 507
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
+ + I+LF ++ S P + + + + A VKL + I L + M GIR +++ +N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
++I C ++ A + +M K VT SL++G+C+ V A +L ++M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
++ ++ L+ +C ++ + EA +L+ ++ D FP + + +L++SL ++ + + L
Sbjct: 288 EVAYTHLIHGLCV-ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E++++G +P+ TY + + K ELL M ++G+ PNV YN LI G CK
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
I DA + + M RKL +T TYN LI GYCK V KA + +M + V
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKV 458
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ M+ +A ++ L+ P + N L++ K + + ++ + PD
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDV 462
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + + G+ + LL M RG+ P+ + Y +I LCK +R+ +A LFD
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
+ ++ + + V Y +LIDGYCK G+VD+A + E+M +N
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 19/176 (10%)
Query: 118 ESKMLSEATELYH-LIR---RDGKFPALGSLNMLLR-----------SLVDFK----QFD 158
ES+ LS T Y+ LI+ + A+G LN +L SL+D + FD
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
L + D G PD+ TY + + K V + +L +S+ ++G+ PNV +Y LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
G CK ++ +A + ++M + + +++T+N+LI G C G++ +A L E+M K
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%)
Query: 141 LGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLE 200
+G N LL SL F D++ +++ME+ + P+ TY K V KLG+V + + +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 201 SMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG 260
+ + G+ P+ F Y LI G C+ + + A K+F+EM + + V Y LI G C
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 261 EVDKAFNLRERMKKE 275
+D+A +L +MK +
Sbjct: 303 RIDEAMDLFVKMKDD 317
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 89/164 (54%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ K L A ++++ + G + L+ L ++ D+ ++LF++++D P
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY +++ ++ + L++ M + GI+PN+ Y VLI LC + + A +L +
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M ++ L+ + +TYN+LI+GYCK G ++ A ++ E M+ + N
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 34/204 (16%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L C S+ SEA L + G P + + +L+ SL +F+K EL ++ +
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 171 GFRPDKMTYGKAVQAAVKLG----------------------------------DVNKGI 196
G P+ +TY + K G +V+K +
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM 447
Query: 197 ELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGY 256
+L M +R + P+V YN LI G C+ A +L M R LV TY S+ID
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 257 CKVGEVDKAFNLRERMKKENVEMN 280
CK V++A +L + ++++ V N
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPN 531
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C S A L L+ G P + ++ SL K+ ++ +LF ++ G P+
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + K G V++ +LE M + PN +N LI GLC + ++ +A L ++
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M K L + T LI K G+ D A++ ++M
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 121 MLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYG 180
++ E ++Y + D P + + N ++ ++ + +I ++G PD TY
Sbjct: 198 LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYT 257
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
+ + D++ ++ M +G R N Y LI GLC RRI +A LF +M
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 317
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ + TY LI C +A NL + M++ ++ N
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ + EA + + P + N L+ L + + L ++ G +P
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
T + +K GD + + M G +P+ Y I C+E R+ DAE + +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M + + TY+SLI GY +G+ + AF++ +RM+ E
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
++ + + C E ++L +A ++ +R +G P L + + L++ D Q + ++
Sbjct: 639 TYTTFIQTYCREGRLL-DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 167 IQDSGFRPDK------------MTYGKA------VQAAVKLGDVNKGIELLESMTKRGIR 208
++D+G P + M YGK + A + + + +ELLE M + +
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757
Query: 209 PNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG-STVTYNSLIDGYCKVGEVDKAFN 267
PN Y LI G+C+ + AEK+FD M + + + S + +N+L+ CK+ + ++A
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817
Query: 268 LRERM 272
+ + M
Sbjct: 818 VVDDM 822
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 63/156 (40%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + EA + I G P + L+ K D ++F E+ G R ++
Sbjct: 229 CKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE 288
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + +++ ++L M P V Y VLI LC R +A L E
Sbjct: 289 VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M + + + TY LID C + +KA L +M
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 84/152 (55%)
Query: 127 ELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAA 186
E++ ++RR G P + + N L+ LV+ +Q +K +E+ E+ +G ++ TY K +Q
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 187 VKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGST 246
+GD K E + G+ ++F Y L+ CK R+ A + EM R + ++
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 247 VTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
YN LIDG+ + G+V +A +L ++MKKE V+
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%)
Query: 120 KMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTY 179
K + A ++ + ++G P + N ++ + D+ I+ E+Q RP T+
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 180 GKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYK 239
+ K GD+ + +E+ + M + G P V +N LI GL ++R++ A ++ DEM
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 240 RKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ + TY ++ GY VG+ KAF R++ E ++++
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
++ ++++ C M A L + +G + + ++ K + +F
Sbjct: 416 IYGKIIYAHCQTCNM-ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR 474
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+++ GF P +TYG + K+G ++K +E+ M + G++ N+ Y+++I G K +
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+A +F++M K + + YN++I +C +G +D+A + M+K
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK 582
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 79/159 (49%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+S+A E+ +++ +G L + +M++ V K + +F ++ G +PD + Y
Sbjct: 500 ISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNN 559
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ A +G++++ I+ ++ M K RP + +I G K + + ++FD M +
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG 619
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
V + T+N LI+G + +++KA + + M V N
Sbjct: 620 CVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + + L+ + K +E+ +++ G + + TY + VKL D
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+ E M K G++P+V +YN +I C + A + EM K + +T T+ +I G
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 256 YCKVGEVDKAFNLRERMKK 274
Y K G++ ++ + + M++
Sbjct: 599 YAKSGDMRRSLEVFDMMRR 617
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N+L+ + +L +++ G +PD TY + A K GD+N+ + +E M
Sbjct: 733 NILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEA 792
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
G++PN+ Y LI G + A ++EM + Y+ L+ + +
Sbjct: 793 LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAE 852
Query: 265 AF 266
A+
Sbjct: 853 AY 854
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 142 GSLNMLLRSL-VDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLE 200
GS L R L + + VI F +I +P + +G V+ + GD+++ E E
Sbjct: 278 GSRKSLQRILDTNGDNWQAVISAFEKIS----KPSRTEFGLMVKFYGRRGDMHRARETFE 333
Query: 201 SMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG 260
M RGI P IY LI R + +A +M + + S VTY+ ++ G+ K G
Sbjct: 334 RMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAG 393
Query: 261 EVDKA---FNLRERMKK 274
+ A F+ +R+ K
Sbjct: 394 HAEAADYWFDEAKRIHK 410
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK---LFD 235
YGK + A + ++ + L+ M + GI + IY+ ++ G + D +K +F
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYT---MVADEKKGLVVFK 473
Query: 236 EMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ + + VTY LI+ Y KVG++ KA + MK+E V+ N
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHN 518
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%)
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
E F ++ G P Y + A D+++ + + M + GI ++ Y+V++GG
Sbjct: 330 ETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 389
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
K A+ FDE + + Y +I +C+ +++A L M++E ++
Sbjct: 390 SKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGID 446
>AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587298-23588220 FORWARD
Length = 257
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 93/172 (54%), Gaps = 7/172 (4%)
Query: 107 VFSDLLFSVC-----CESKMLSEATELY-HLIRRDGKFPALGSLNMLLRSLVDFKQFDKV 160
+F ++L C C S S+A +L H+I + P + + + L+ + V ++ +
Sbjct: 41 IFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN-PDIVTFSALINAFVKERKVSEA 99
Query: 161 IELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGG 220
E++ E+ P +TY + K V+ +L+SM +G P+V ++ LI G
Sbjct: 100 EEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLING 159
Query: 221 LCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
CK +R+ + ++F EM++R +V +TVTY +LI G+C+VG++D A +L M
Sbjct: 160 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V S + C+ A L+ + G FP + + N ++ S ++ +L
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ + PD +T+ + A VK V++ E+ + M + I P YN +I G CK+
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ DA+++ D M + VT+++LI+GYCK VD + M + + N
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ + E K +SEA E+Y + R FP + N ++ + D +
Sbjct: 81 VTFSALINAFVKERK-VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ G PD +T+ + K V+ G+E+ M +RGI N Y LI G C+
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 199
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ A+ L +EM + +T++ ++ G C E+ KAF + E ++K
Sbjct: 200 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 35/138 (25%)
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC------- 222
S + D + V K G+ L M ++GI PNV YN +I C
Sbjct: 4 SHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD 63
Query: 223 ----------------------------KERRIGDAEKLFDEMYKRKLVGSTVTYNSLID 254
KER++ +AE+++ EM + + +T+TYNS+ID
Sbjct: 64 ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMID 123
Query: 255 GYCKVGEVDKAFNLRERM 272
G+CK VD A + + M
Sbjct: 124 GFCKQDRVDDAKRMLDSM 141
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ +S L+ C + L EA +++ + FP + + N L++ +K+ ++ +E+F
Sbjct: 362 VTYSSLINGFCMHDR-LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G + +TY +Q + GD + E+ + M G+ PN+ YN L+ GLCK
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
++ A +F+ + + K+ + TYN +I+G CK G+V+ ++L
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + N ++ L +K D + LF E++ G RP+ +TY + G + L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
L M +R I P+VF ++ LI KE ++ +AEKL+DEM KR + S VTY+SLI+G+C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 259 VGEVDKAFNLRERM 272
+D+A + E M
Sbjct: 374 HDRLDEAKQMFEFM 387
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C SK +SEA L + G P + N L+ L + + + L + G +PD
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TYG V K GD + LL M + + P V IYN +I GLCK + + DA LF E
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M + + + VTY+SLI C G A L M
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 81/159 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ K + E E++ + + G + N+L++ L D E+F E+ G P+
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
MTY + K G + K + + E + + + P ++ YN++I G+CK ++ D LF
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + V YN++I G+C+ G ++A L + MK++
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ K + +A L+ + G P + + + L+ L ++ ++ L ++ + PD
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
T+ + A VK G + + +L + M KR I P++ Y+ LI G C R+ +A+++F+
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + VTYN+LI G+CK V++ + M + + N
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 1/173 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
FS L+ + E K++ EA +LY + + P++ + + L+ + D+ ++F
Sbjct: 327 FTFSALIDAFVKEGKLV-EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ PD +TY ++ K V +G+E+ M++RG+ N YN+LI GL +
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
A+++F EM + + +TYN+L+DG CK G+++KA + E +++ +E
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 84/170 (49%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L + C L A + + + G P + +L+ LL K+ + + L ++ +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G++P+ +T+ + ++ + L++ M +G +P++ Y V++ GLCK A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
L ++M + KL + YN++IDG CK +D A NL + M+ + + N
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 35/192 (18%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L +A L+ + + FP++ + LL ++ +FD VI L ++Q+ G + TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + + + +L M K G PN+ + L+ G C +RI +A L D+M+
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 242 LVGSTVTYNSLI-----------------------------------DGYCKVGEVDKAF 266
+TVT+N+LI +G CK G+ D AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 267 NLRERMKKENVE 278
NL +M++ +E
Sbjct: 242 NLLNKMEQGKLE 253
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A E++ + DG P + + N LL L + +K + +F +Q S P TY ++
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
K G V G +L +++ +G++P+V YN +I G C++ +A+ LF EM + +
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMK 273
++ YN+LI + G+ + + L + M+
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
+ D + LF E+ S P + + K + A K+ + I L E M GI N + Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+LI C+ ++ A + +M K + VT +SL++GYC + +A L ++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + L EA ++ L++ P +L +L+ L D I +F + + G +P+
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TYG + K D+ +L E M ++GI P++ Y+++I GLCK R+ +A +F +
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
KL+ V Y LI GYCKVG + +A L E M + V+
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + A +L+ ++ + G P L + + L+ +LF + G + D
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ + + VK GD+ + + M +GI PNV Y +LI GLC++ RI +A ++ +
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ KR + S VTY+SLIDG+CK G + F L E M K
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 1/167 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+VFS + V +S L+ A+ +Y + G P + + +L++ L + + ++
Sbjct: 357 VVFSSTI-DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+I G P +TY + K G++ G L E M K G P+V IY VL+ GL K+
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ A + +M + + + V +NSLIDG+C++ D+A + M
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
L +V + L C EA +++ L+ G P + + ++R + + ++ + L
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFL 553
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
F + G PD + Y + A K G++L + M + I ++ + NV+I L K
Sbjct: 554 FFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
RI DA K F+ + + K+ VTYN++I GYC + +D+A + E +K
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + N ++ ++ D+ +F ++ + F P+ +T + K D++ I +
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M ++G +PN Y L+ K I + KLF+EM ++ + S V+Y+ +IDG CK
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 259 VGEVDKAFNL 268
G VD+A N+
Sbjct: 754 RGRVDEATNI 763
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+++A + + L+ G + S N +L+ L Q + L + D G P+ +T+
Sbjct: 233 VTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ K G++++ +L + M +RGI P++ Y+ LI G K +G KLF + +
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ V ++S ID Y K G++ A + +RM + + N
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN 390
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
L CC M+ +A E++ + G S+ +L SL+ + D + + F ++
Sbjct: 151 FLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRG 210
Query: 171 GFRPDKMT-YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G P ++ +G + A G+V K ++ + +RG R + N ++ GL + +I
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
A +L + + VT+ +LI+G+CK GE+D+AF+L + M++ +E
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE 318
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A+ L L+ G P + + L+ + D+ +LF ++ G PD + Y +
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
K G + G +L +G++ +V +++ I K + A ++ M + +
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ VTY LI G C+ G + +AF + ++ K +E
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + EA +Y I + G P++ + + L+ L+ ++ G+ PD
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ YG V K G + + M + IR NV ++N LI G C+ R +A K+F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M + T+ +++ G +++A L RM K +E
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%)
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G P+ +TY ++ + G + + + + KRG+ P++ Y+ LI G CK +
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
L+++M K V Y L+DG K G + A +M +++ +N
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 73/162 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + +L+ L++R+ + N+++ L + + + F + + PD
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + L +++ + E + PN +LI LCK + A ++F
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 696
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M ++ + VTY L+D + K +++ +F L E M+++ +
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 57/129 (44%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L V C++ + A ++ ++ G P + L+ + +LF E+Q+
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G P ++Y + K G V++ + + P+V Y +LI G CK R+ +A
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 231 EKLFDEMYK 239
L++ M +
Sbjct: 796 ALLYEHMLR 804
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%)
Query: 109 SDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
S+ L CE+ L EA + I G S N L+ K+ D+ E+
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
G +PD TY + + V + I+ + + G+ P+V+ Y+V+I G CK R
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ ++ FDEM + + +TV YN LI YC+ G + A LRE MK + + N
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 39/210 (18%)
Query: 109 SDLLFSVCC---ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
SDLL V C + A +++ ++ G FP+ + N+LL SLV +F K E F
Sbjct: 191 SDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF- 249
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN---------- 215
++ G PD + A+ A K G V + ++L M + G+ PNV +N
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 216 -------------------------VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
+L+ GL + +RIGDA + EM K+ + + YN
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+LID + + G ++KA +++ M + + +
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 82/159 (51%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ EA + + +R+G P + + ++++ ++ ++ E F E+ +P+ + Y
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++A + G ++ +EL E M +GI PN Y LI G+ R+ +A+ LF+EM
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
L + Y +LIDGY K+G++ K L M +NV N
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+ L S CC K L EA + + G P + ++L+ L + + ++ I+ + + +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
+G PD TY + K +G E + M + ++PN +YN LI C+ R+
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A +L ++M + + ++ TY SLI G + V++A L E M+ E +E N
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
V + L C S LS A EL ++ G P + L++ + + ++ LF E
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
++ G P+ Y + KLG + K LL M + + PN Y V+IGG ++
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
+ +A +L +EM ++ +V ++TY I GY K G V +AF
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + EA +L+ + G P + + N ++ L ++D+ ++ + G P
Sbjct: 271 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY V+ + + +L+ MTK+G PNV +YN LI + + A ++ D
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
M + L ++ TYN+LI GYCK G+ D A ER+ KE
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNA----ERLLKE 425
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S C+ S+A EL+ G + N LL L + + D+ + EI G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
D+++Y + +++ L+ M KRG++P+ + Y++LI GL ++ +A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +D+ + ++ TY+ +IDG CK ++ + M +NV+ N
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 116 CCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPD 175
CC+++ E E + + P N L+R+ + +EL +++ G P+
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 176 KMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD 235
TY ++ + V + L E M G+ PNVF Y LI G K ++ E L
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 236 EMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
EM+ + + + +TY +I GY + G V +A L M+++ +
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P G L L+ L + K +EL+ + + GF D T + + G +++ +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
+ + RG + YN LI G C ++++ +A DEM KR L TY+ LI G
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 259 VGEVDKAFNLRERMKKENV 277
+ +V++A + K+ +
Sbjct: 588 MNKVEEAIQFWDDCKRNGM 606
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P L + ++L++ L K+ + E+ GF P+ + Y + + ++ G +NK
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
IE+ + M +G+ YN LI G CK + +AE+L EM + ++ S+I
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 256 YCKVGEVDKAFNLRERMKKENV 277
C D A M N+
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNM 466
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%)
Query: 142 GSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLES 201
GS ++ L FD + E+ P + K G +K +EL
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 202 MTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
+G + N L+ GLC+ ++ +A ++ E+ R V V+YN+LI G C +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 262 VDKAFNLRERMKKENVE 278
+D+AF + M K ++
Sbjct: 556 LDEAFMFLDEMVKRGLK 572
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
L +++ C S A+ + + G P L + LL + + + I LF
Sbjct: 118 LCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD 177
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+I GF+P+ +TY ++ K +N +EL M G RPNV YN L+ GLC+
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
R GDA L +M KR++ + +T+ +LID + KVG++ +A L M + +V
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 82/152 (53%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C +L EA ++++L+ R+G +P L+ K+ + +++F E+ G +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY +Q +G + E+ M+ R P++ YNVL+ GLC ++ A +F+
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
M KR++ + VTY +I G CK+G+V+ AF+L
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 86/159 (54%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L EA ELY+++ + +P + + L+ L + D+ ++F ++ +G P+++ Y
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ K V G+++ M+++G+ N Y VLI G C R A+++F++M R+
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
TYN L+DG C G+V+KA + E M+K +++N
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 35/184 (19%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+++ L+ A EL++ + +G P + + N L+ L + ++ L ++ P+
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVF------------------------ 212
+T+ + A VK+G + + EL M + + P+VF
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 213 -----------IYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
IY LI G CK +R+ D K+F EM ++ +V +T+TY LI GYC VG
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 262 VDKA 265
D A
Sbjct: 379 PDVA 382
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 4/169 (2%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ F+ LL C ++ + +A L+ I G P + + L+R L + + +ELF
Sbjct: 154 VTFTSLLNGYCHWNR-IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFN 212
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ +G RP+ +TY V ++G LL M KR I PNV + LI K
Sbjct: 213 QMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVG 272
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA---FNLRER 271
++ +A++L++ M + + TY SLI+G C G +D+A F L ER
Sbjct: 273 KLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
S PL ++ L SV + L+ ++ G P L + N+++ + Q +
Sbjct: 77 SRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCR 136
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
++ GF PD +T+ + + I L + + G +PNV Y LI
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV-DKAFNLRERMKK 274
LCK R + A +LF++M + VTYN+L+ G C++G D A+ LR+ MK+
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+++++ L+ C +SK + + ++++ + + G + +L++ + D E+F
Sbjct: 328 EVIYTTLIHGFC-KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++ PD TY + G V K + + E M KR + N+ Y ++I G+CK
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
++ DA LF ++ + + + +TY ++I G+C+ G + +A +L ++MK++
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%)
Query: 140 ALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELL 199
A S +LR+ + QF+ ++LF + S P + + + + K+ + I L
Sbjct: 47 AFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF 106
Query: 200 ESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKV 259
E M GI P + N+++ +C + A +M K VT+ SL++GYC
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 260 GEVDKAFNLRERM 272
++ A L +++
Sbjct: 167 NRIEDAIALFDQI 179
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 85/159 (53%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ + EA+ L + R G +P + N+L+ + E+ ++ G PD
Sbjct: 288 CKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDV 347
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + ++G V++G L E M RG+ PN F Y++LI LC E R+ A +L +
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ 407
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + ++ YN +IDG+CK G+V++A + E M+K+
Sbjct: 408 LASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
F+ L+ +C K +A EL ++ G P + + N L++ + +K E+F ++
Sbjct: 209 FNILIRGLCGVGKA-EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 168 QD-SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+ S PD +TY + K G + + LL+ M + GI P +NVL+ G K
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ AE++ +M VT+ SLIDGYC+VG+V + F L E M
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+ N+L+R L + +K +EL + G PD +TY +Q K ++NK E+ + +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 203 TKRGI-RPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
+ P+V Y +I G CK ++ +A L D+M + + + VT+N L+DGY K GE
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 262 VDKAFNLRERM 272
+ A +R +M
Sbjct: 328 MLTAEEIRGKM 338
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
+N LL +LV + + ++LF E D T+ ++ +G K +ELL M+
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG-STVTYNSLIDGYCKVGEV 262
G P++ YN LI G CK + A ++F ++ + VTY S+I GYCK G++
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 263 DKAFNLRERM 272
+A +L + M
Sbjct: 294 REASSLLDDM 303
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G FP + + L+ Q + L+ E+ G P+ TY + A + K
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
ELL + + I P F+YN +I G CK ++ +A + +EM K+K +T+ LI G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 256 YCKVGEVDKAFNLRERM 272
+C G + +A ++ +M
Sbjct: 462 HCMKGRMFEAVSIFHKM 478
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C +S+ L+ + G FP + ++L+ +L + + K EL ++ P
Sbjct: 358 CRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
Y + K G VN+ ++E M K+ +P+ + +LI G C + R+ +A +F +
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
M +T +SL+ K G +A++L + +K
Sbjct: 478 MVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 140 ALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELL 199
+ + N+L RSL D ++F ++ G P+ G V + + G ++ LL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 200 -ESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
+S G + N L+ L K R+ DA KLFDE + + T T+N LI G C
Sbjct: 162 LQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 259 VGEVDKAFNL 268
VG+ +KA L
Sbjct: 219 VGKAEKALEL 228
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 85/159 (53%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ + EA+ L + R G +P + N+L+ + E+ ++ G PD
Sbjct: 288 CKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDV 347
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + ++G V++G L E M RG+ PN F Y++LI LC E R+ A +L +
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ 407
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + ++ YN +IDG+CK G+V++A + E M+K+
Sbjct: 408 LASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
F+ L+ +C K +A EL ++ G P + + N L++ + +K E+F ++
Sbjct: 209 FNILIRGLCGVGKA-EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 168 QD-SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+ S PD +TY + K G + + LL+ M + GI P +NVL+ G K
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ AE++ +M VT+ SLIDGYC+VG+V + F L E M
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+ N+L+R L + +K +EL + G PD +TY +Q K ++NK E+ + +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 203 TKRGI-RPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
+ P+V Y +I G CK ++ +A L D+M + + + VT+N L+DGY K GE
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 262 VDKAFNLRERM 272
+ A +R +M
Sbjct: 328 MLTAEEIRGKM 338
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
+N LL +LV + + ++LF E D T+ ++ +G K +ELL M+
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG-STVTYNSLIDGYCKVGEV 262
G P++ YN LI G CK + A ++F ++ + VTY S+I GYCK G++
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 263 DKAFNLRERM 272
+A +L + M
Sbjct: 294 REASSLLDDM 303
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G FP + + L+ Q + L+ E+ G P+ TY + A + K
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
ELL + + I P F+YN +I G CK ++ +A + +EM K+K +T+ LI G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 256 YCKVGEVDKAFNLRERM 272
+C G + +A ++ +M
Sbjct: 462 HCMKGRMFEAVSIFHKM 478
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C +S+ L+ + G FP + ++L+ +L + + K EL ++ P
Sbjct: 358 CRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
Y + K G VN+ ++E M K+ +P+ + +LI G C + R+ +A +F +
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
M +T +SL+ K G +A++L + +K
Sbjct: 478 MVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 140 ALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELL 199
+ + N+L RSL D ++F ++ G P+ G V + + G ++ LL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 200 -ESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
+S G + N L+ L K R+ DA KLFDE + + T T+N LI G C
Sbjct: 162 LQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 259 VGEVDKAFNL 268
VG+ +KA L
Sbjct: 219 VGKAEKALEL 228
>AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13454853-13456418 FORWARD
Length = 521
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A Y +RR P +LNM++ + DK IEL +++ GFR ++Y +
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
+ G ++ ++L M K G++PNV +N LI G C+ ++ +A K+F EM +
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERM 272
+TVTYN+LI+GY + G+ + AF E M
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
D LF K AT+ + ++ G P + S N + SL+ + D + + E++
Sbjct: 172 DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRR 231
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
P+ T + + G ++KGIELL+ M + G R YN LI G C++ +
Sbjct: 232 CKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSS 291
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A KL + M K L + VT+N+LI G+C+ ++ +A + MK NV N
Sbjct: 292 ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+ L + CE +LS A +L +++ + G P + + N L+ + + ++F E++
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
P+ +TY + + GD E M GI+ ++ YN LI GLCK+ +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A + E+ K LV ++ T+++LI G C D+ F L + M + N
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
++ SL ++ D + LF E+ + G RPD TY + G + LL M +R
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
I PNV +N LI KE ++ +AEKLFDEM +R + + VTYNSLI+G+C +D+A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+++ + C LS A + + + G P++ +LN LL + + + L ++ +
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G++PD +T+ V + ++ + L+E M +G +P++ Y +I GLCK
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
A L ++M K K+ V Y+++ID CK VD A NL M + +
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+++S ++ S+C + + + +A L+ + G P + + + L+ L ++ ++ L
Sbjct: 241 VIYSTVIDSLC-KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ + P+ +T+ + A K G + + +L + M +R I PN+ YN LI G C
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ +A+++F M + + VTYN+LI+G+CK +V L M + + N
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%)
Query: 123 SEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
SEA L + G P L + ++ L + D + L +++ D + Y
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
+ + K V+ + L M +GIRP+VF Y+ LI LC R DA +L +M +RK+
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 243 VGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ VT+NSLID + K G++ +A L + M + +++ N
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++K + + EL+ + R G + L+ D +F ++ G P+
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
MTY + K G + K + + E + K + P+++ YN++ G+CK ++ D LF
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + + YN++I G+CK G ++A+ L +MK++
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C L EA +++ L+ P + + N L+ K+ +ELF ++ G +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + + D + + + M G+ PN+ YN L+ GLCK ++ A +F+
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ K K+ TYN + +G CK G+V+ ++L
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVD-FKQFDKVIE---LFMEI 167
L S C S+A+ L + P + + N SL+D F + K+IE LF E+
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFN----SLIDAFAKEGKLIEAEKLFDEM 336
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
P+ +TY + +++ ++ M + P+V YN LI G CK +++
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
D +LF +M +R LVG+TVTY +LI G+ + + D A + ++M + V N
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ F+ L+ + E K++ EA +L+ + + P + + N L+ + D+ ++F
Sbjct: 311 VTFNSLIDAFAKEGKLI-EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ PD +TY + K V G+EL M++RG+ N Y LI G +
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+A+ +F +M + + +TYN+L+DG CK G+++KA + E ++K +E
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%)
Query: 135 DGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNK 194
DG P + + N LL L + +K + +F +Q S PD TY + K G V
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 195 GIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLID 254
G +L S++ +G++P+V YN +I G CK+ +A LF +M + + + TYN+LI
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 255 GYCKVGEVDKAFNLRERMK 273
+ + G+ + L + M+
Sbjct: 564 AHLRDGDKAASAELIKEMR 582
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L EA +L+ + + FP++ + LL ++ K+FD VI +++ G + TY
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + ++ + +L M K G P++ N L+ G C RI +A L D+M +
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
TVT+ +L+ G + + +A L ERM
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
+ D+ ++LF E+ S P + + K + A K+ + I E M G+ N++ YN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
++I LC+ ++ A + +M K S VT NSL++G+C + +A L ++M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ +S L++ +C S+ L EA E++ + G FP + + ++L+ K+ + ++LF
Sbjct: 292 VTYSLLIYGLCMYSR-LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G + +TY +Q + G +N E+ M G+ PN+ YNVL+ GLC
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+I A + +M K + VTYN +I G CK GEV A+++
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+SK + A +L + + +DG P + + N L+ L ++ + + PD
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
T+ + A VK G V++ E E M +R + P++ Y++LI GLC R+ +AE++F
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + VTY+ LI+GYCK +V+ L M + V N
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S C S S+AT + + + +P + + N L+ + V + + E + E+
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD +TY + +++ E+ M +G P+V Y++LI G CK +++
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
KLF EM +R +V +TVTY LI GYC+ G+++ A + RM V N
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L C + +SEA E Y + R P + + ++L+ L + + D+ E+F + G
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD +TY + K V G++L M++RG+ N Y +LI G C+ ++ AE
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
++F M + + +TYN L+ G C G+++KA + M+K ++
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + +A ++ + G P + N ++ L KQ D ++L ++ G PD
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + G + ++ MTKR I P+VF +N LI KE R+ +AE+ ++E
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
M +R L VTY+ LI G C +D+A
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
L ++L + C LS A + + G P++ + LL + + +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++ G++P+ + Y + K V+ ++LL M K GI P+V YN LI GLC
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
R DA ++ M KR++ T+N+LID K G V +A E M + +++
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 80/156 (51%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L ++ +L+ + + P++ + LL ++ K++D VI L+ ++Q G + T
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + ++ + L M K G P++ + L+ G C+ R+ DA +FD+M
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ V YN++IDG CK +VD A +L RM+K+ +
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
+LR+ + F + D ++LF + P + + + A K+ + I L E M G
Sbjct: 52 MLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
I N+ N+L+ C+ ++ A +M K S VT+ SL++G+C+ V A
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 267 NLRERM 272
+ ++M
Sbjct: 172 YMFDQM 177
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++ L+ C E + EA ++++L+ G FP + + L+ K+ D +++F
Sbjct: 283 FTYTSLINGFCMEG-CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G + +TY +Q ++G N E+ M RG+ PN+ YNVL+ LC
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 226 RIGDAEKLFDEMYKRKLVG---STVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
++ A +F++M KR++ G + TYN L+ G C G+++KA + E M+K ++
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ F+ L+ C ++M EA + + + G P + ++ SL + + LF
Sbjct: 143 VTFTSLINGFCLGNRM-EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++++ G RPD + Y V G LL MTKR I+P+V +N LI KE
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+ DAE+L++EM + + + TY SLI+G+C G VD+A
Sbjct: 262 KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+LL + C+S A+ + + G P + + L+ + ++ + + ++ +
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G +PD + Y + + K G VN + L + M GIRP+V +Y L+ GLC R D
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A+ L M KRK+ +T+N+LID + K G+ A L M + ++ N
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++++ L+ +C + + L + +R K P + + N L+ + V +F EL+
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK-PDVITFNALIDAFVKEGKFLDAEELYN 271
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ P+ TY + G V++ ++ M +G P+V Y LI G CK +
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK 331
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ DA K+F EM ++ L G+T+TY +LI G+ +VG+ + A + M V N
Sbjct: 332 KVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ ++ A L+ + G P + L+ L + ++ L + +PD
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + A VK G EL M + I PN+F Y LI G C E + +A ++F
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + V Y SLI+G+CK +VD A + M ++ + N
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ F+ L+ + E K L +A ELY+ + R P + + L+ D+ ++F
Sbjct: 248 ITFNALIDAFVKEGKFL-DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ G PD + Y + K V+ +++ M+++G+ N Y LI G +
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ A+++F M R + + TYN L+ C G+V KA + E M+K ++
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
S PL ++ L +V + K L ++ G L + N+L+ Q
Sbjct: 66 SRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYL 125
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
++ GF PD +T+ + + + + ++ M + GI+P+V +Y +I
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
LCK + A LFD+M + V Y SL++G C G A +L M K ++
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 62/126 (49%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
+LR+ + QF++ ++LF + +S P + + K + K+ + I L + + G
Sbjct: 43 ILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
+ +++ N+L+ C+ + A +M K VT+ SLI+G+C +++A
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 267 NLRERM 272
++ +M
Sbjct: 163 SMVNQM 168
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + N+L+R D + LF +++ G P+ +TY + KL ++ G +L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
L SM +G+ PN+ YNV+I GLC+E R+ + + EM +R VTYN+LI GYCK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 259 VGEVDKAFNLRERMKKENV 277
G +A + M + +
Sbjct: 323 EGNFHQALVMHAEMLRHGL 341
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 127 ELYHLIRR---DGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
E Y ++R +G P++ + N L+ + + I + ++++ G PD ++Y +
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
+ DV++ + + M ++GI+P+ Y+ LI G C++RR +A L++EM + L
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
TY +LI+ YC G+++KA L M ++ V
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG-DVNKGIELLESM 202
+++++S DK + + Q GF P ++Y + A ++ +++ + + M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
+ + PNVF YN+LI G C I A LFD+M + + + VTYN+LIDGYCK+ ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 263 DKAFNLRERMKKENVEMN 280
D F L M + +E N
Sbjct: 257 DDGFKLLRSMALKGLEPN 274
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 1/170 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
++ ++ +C E +M + L + RR + + N L++ F + + + E+
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV-TYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
G P +TY + + K G++N+ +E L+ M RG+ PN Y L+ G ++ +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+A ++ EM S VTYN+LI+G+C G+++ A + E MK++ +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ L+ S+C M + A E +R G P + L+ ++ +
Sbjct: 346 ITYTSLIHSMCKAGNM-NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ D+GF P +TY + G + I +LE M ++G+ P+V Y+ ++ G C+
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ +A ++ EM ++ + T+TY+SLI G+C+ +A +L E M
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE-LFMEIQ 168
DL+ ++ +A + HL + G P + S N +L + + K+ E +F E+
Sbjct: 138 DLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML 197
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
+S P+ TY ++ G+++ + L + M +G PNV YN LI G CK R+I
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK-AFNLRE 270
D KL M + L + ++YN +I+G C+ G + + +F L E
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ +A ++ + R G P++ + L+ S+ ++ +E +++ G P++
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY V + G +N+ +L M G P+V YN LI G C ++ DA + ++
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M ++ L V+Y++++ G+C+ +VD+A R+K+E VE
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEAL----RVKREMVE 478
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C S + EA + + G P + + L++ + ++ + +L+ E+ G PD+
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + A GD+ K ++L M ++G+ P+V Y+VLI GL K+ R +A++L +
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 237 MYKRKLVGSTVTYNSLID---------------GYCKVGEVDKAFNLRERMKKEN 276
++ + V S VTY++LI+ G+C G + +A + E M +N
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 78/156 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + + + +L + G P L S N+++ L + +V + E+ G+ D+
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY ++ K G+ ++ + + M + G+ P+V Y LI +CK + A + D+
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M R L + TY +L+DG+ + G +++A+ + M
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ L+ C KM +A + ++ G P + S + +L D+ + +
Sbjct: 416 VTYNALINGHCVTGKM-EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ + G +PD +TY +Q + + +L E M + G+ P+ F Y LI C E
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+ A +L +EM ++ ++ VTY+ LI+G
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLING 564
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L EA +++ L+ G P + + ++L+ S K+ D + LF EI G P+
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY V + G +N EL + M RG+ P+V Y +L+ GLC + A ++F++
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
M K ++ YN +I G C +VD A++L
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ E K+L EA ELY+ + G P + N L+ + ++F
Sbjct: 316 VTFSALIDVFVKEGKLL-EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ G PD +TY + + K V+ G+ L ++ +G+ PN YN L+ G C+
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
++ A++LF EM R + S VTY L+DG C GE++KA + E+M+K + +
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V +L + C++K + + L+ I G P + N L+ + + ELF
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G P +TYG + G++NK +E+ E M K + + IYN++I G+C
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
++ DA LF + + + VTYN +I G CK G + +A L +MK++
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ C E + +SEA L + + P L +++ L+ L + + + L
Sbjct: 141 ITFSTLVNGFCLEGR-VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID 199
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ + GF+PD++TYG + K G+ ++L M +R I+ +V Y+++I LCK+
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
DA LF+EM + + VTY+SLI G C G+ D + M N+
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+S + A +L+ + ++ ++++ SL FD + LF E++ G + D
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + G + G ++L M R I P+V ++ LI KE ++ +A++L++E
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 237 MYKRKLVGSTVTYNSLIDGYCK---VGEVDKAFNL 268
M R + T+TYNSLIDG+CK + E ++ F+L
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+S L+ A EL+ + G P++ + +LL L D + +K +E+F ++Q S
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
Y + V+ L S++ +G++P+V YNV+IGGLCK+ + +A+ LF +
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
M + TYN LI + + + L E MK
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ +A L++ + G + + + L+ L + ++D ++ E+ PD
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + VK G + + EL M RGI P+ YN LI G CKE + +A ++FD
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
M + VTY+ LI+ YCK VD L
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G+ PD +T+ V G V++ + L++ M + RP++ + LI GLC + R+ +A
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
L D M + VTY +++ CK G A +L +M++ N++
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK 232
RPD +T + G V++ + L++ M + G +P+ Y ++ LCK A
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 233 LFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
LF +M +R + S V Y+ +ID CK G D A +L M+ + ++ +
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+V +L C++ L++A E++ +++ +G N+++ + + + D LF
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
+ D G +PD +TY + K G +++ L M + G P+ F YN+LI
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLID 254
+ + +L +EM + T +ID
Sbjct: 574 SGLISSVELIEEMKVCGFSADSSTIKMVID 603
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+V ++L + C +L A ++ + + G P S N LL K+ D+ IE
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
+ G PD +TY + A K G V +E+L ++ +G P + YN +I GL K
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA---FNLRERM 272
+ G A KL DEM + L T+TY+SL+ G + G+VD+A F+ ERM
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ +L S+C K+ L +++RD +P + + +L+ + ++L
Sbjct: 205 VTYNTILRSLCDSGKLKQAMEVLDRMLQRDC-YPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E++D G PD +TY V K G +++ I+ L M G +PNV +N+++ +C
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R DAEKL +M ++ S VT+N LI+ C+ G + +A ++ E+M + + N
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
L ++ LL C E KM L ++ R G +P + + N +L +L + + +E+
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSR-GCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++ G P +TY + K G K I+LL+ M + ++P+ Y+ L+GGL +E
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFN 267
++ +A K F E + + + VT+NS++ G CK + D+A +
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 91/174 (52%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
++ +++ C + +A +L + R G P++ + N+L+ L + I++
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++ G +P+ ++Y + K +++ IE LE M RG P++ YN ++ LCK+
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
++ DA ++ +++ + +TYN++IDG K G+ KA L + M+ ++++
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 99 ASTPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFD 158
TP +V ++L + C+ L EA + + + G P + + N++LRS+ ++
Sbjct: 269 GCTP--DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
+L ++ GF P +T+ + + G + + I++LE M + G +PN YN L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
G CKE+++ A + + M R VTYN+++ CK G+V+ A + ++
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
+A ++ ++ G P + + N+++ + + + + + S PD +TY +
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTIL 211
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
++ G + + +E+L+ M +R P+V Y +LI C++ +G A KL DEM R
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
VTYN L++G CK G +D+A M + N
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 84/162 (51%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L C + A +L +R G P + + N+L+ + + D+ I+ ++ S
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G +P+ +T+ +++ G +LL M ++G P+V +N+LI LC++ +G A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ ++M + ++++YN L+ G+CK ++D+A ERM
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V + + + C+ + +A E+ + + G P L + N ++ L + K I+L
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E++ +PD +TY V + G V++ I+ + GIRPN +N ++ GLCK R
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL------RERMKKENVE 278
+ A M R + +Y LI+G G +A L + MKK + E
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAE 592
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%)
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
+S F + + ++ V+ G++ +G + LE+M G P++ LI G C+ +
Sbjct: 95 NSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR 154
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
A K+ + + V +TYN +I GYCK GE++ A ++ +RM
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM 198
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N LR +V + ++ + + G PD + ++ +LG K ++LE +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
G P+V YNV+I G CK I +A + D M + VTYN+++ C G++ +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 265 AFNLRERM 272
A + +RM
Sbjct: 223 AMEVLDRM 230
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 95/175 (54%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+++S ++ S+C + + +A L+ + G P + + + L+ L ++ ++ L
Sbjct: 859 VIYSTVIDSLC-KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 917
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ + P+ +T+ + A VK G + K +L E M KR I PN+F Y+ LI G C
Sbjct: 918 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 977
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+G+A+++ + M ++ + + VTYN+LI+G+CK VDK L M + + N
Sbjct: 978 RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGN 1032
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N ++ L +K D + LF E+ + G RPD TY + G + LL M +
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
R I PNV ++ LI KE ++ +AEKL+DEM KR + TY+SLI+G+C +D+
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 265 AFNLRERM 272
A ++ E M
Sbjct: 382 AKHMFELM 389
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 77/164 (46%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C SK +S+A L + G P + L+ L + + + L ++ G +PD
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TYG V K GD++ + LL+ M K I +V IYN +I GLCK + + DA LF E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + TY+SLI C G A L M + + N
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+S L+ C + L EA ++ L+ FP + + + L++ K+ ++ +ELF
Sbjct: 364 FTYSSLINGFCMHDR-LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G + +TY + + D + + + M G+ PN+ YN+L+ GLCK
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
++ A +F+ + + + TYN +I+G CK G+V+ + L
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C LS A + + + G P + +L+ LL K+ + L ++ + G++PD
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
T+ + ++ + L++ M +RG +P++ Y ++ GLCK I A L +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M K K+ V YN++IDG CK +D A NL M + +
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+S L+ C + L EA ++ L+ R P + + N L+ K+ DK +ELF
Sbjct: 964 FTYSSLINGFCMLDR-LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 1022
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G + +TY + + D + + + M G+ PN+ YN+L+ GLCK
Sbjct: 1023 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 1082
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
++ A +F+ + + + TYN +I+G CK G+
Sbjct: 1083 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 1118
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S C S+A+ L + P L + + L+ + V + K +L+ E+
Sbjct: 899 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 958
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ TY + L + + ++LE M ++ PNV YN LI G CK +R+
Sbjct: 959 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 1018
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+LF EM +R LVG+TVTY +LI G+ + + D A + ++M V N
Sbjct: 1019 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 1067
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ K + +A L+ + G P + + + L+ L ++ ++ L ++ + P+
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + A VK G + + +L + M KR I P++F Y+ LI G C R+ +A+ +F+
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + VTY++LI G+CK V++ L M + + N
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 83/159 (52%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++K + E EL+ + + G + L+ + D +F ++ G P+
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + K G + K + + E + + + P+++ YN++I G+CK ++ D +LF
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + + + YN++I G+C+ G ++A +L ++MK++
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C +S+A L + G P + L+ L + + + L + G +PD
Sbjct: 764 CHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL 823
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TYG V K GD + + LL M I NV IY+ +I LCK R DA LF E
Sbjct: 824 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 883
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + + +TY+SLI C G A L M + + N
Sbjct: 884 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 927
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + +LN LL + + L ++ + G++PD +T+ + ++
Sbjct: 748 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 807
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+ L++ M +RG +P++ Y ++ GLCK A L ++M K+ + V Y+++ID
Sbjct: 808 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 867
Query: 256 YCKVGEVDKAFNLRERMKKENVEMN 280
CK D A NL M+ + V N
Sbjct: 868 LCKYRHEDDALNLFTEMENKGVRPN 892
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S C S+A+ L + P + + + L+ + V + + +L+ E+
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD TY + +++ + E M + PNV Y+ LI G CK +R+ +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+LF EM +R LVG+TVTY +LI G+ + + D A + ++M V N
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + + N+LL L + K + +F +Q S PD TY ++ K G V G
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
EL +++ +G+ PNV YN +I G C++ +A+ L +M + + ++ TYN+LI
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 256 YCKVGEVDKAFNLRERMK 273
+ G+ + + L + M+
Sbjct: 583 RLRDGDREASAELIKEMR 600
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ + E K++ EA +LY + + P + + + L+ + D+ +F
Sbjct: 329 VTFSALIDAFVKEGKLV-EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ P+ +TY ++ K V +G+EL M++RG+ N Y LI G + R
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+A+ +F +M + + +TYN L+DG CK G++ KA + E +++ +E
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 35/192 (18%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYG- 180
+ +A +L+ + + FP++ N LL ++ +F+ VI L ++Q G D TY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 181 ---------------KAVQAAVKLG-------------------DVNKGIELLESMTKRG 206
+ +KLG ++ + L++ M + G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
+P+ F + LI GL + +A L D+M +R VTY ++++G CK G++D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 267 NLRERMKKENVE 278
+L ++M+K +E
Sbjct: 244 SLLKKMEKGKIE 255
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 35/194 (18%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF--MEI------------ 167
L +A L+ ++ + FP++ + LL ++ +FD VI MEI
Sbjct: 664 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 723
Query: 168 ---------------------QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
G+ PD +T + ++ + L++ M + G
Sbjct: 724 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 783
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
+P+ + LI GL + +A L D M +R VTY ++++G CK G+ D A
Sbjct: 784 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 843
Query: 267 NLRERMKKENVEMN 280
NL +M+ +E N
Sbjct: 844 NLLNKMEAAKIEAN 857
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 140 ALGSLNMLLRS-LVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
A G +LR+ L D + D ++LF ++ S P + + K + A K+ I L
Sbjct: 46 ASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISL 105
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
E M GI +++ Y++ I C+ ++ A + +M K VT +SL++GYC
Sbjct: 106 GEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 259 VGEVDKAFNLRERM 272
+ A L ++M
Sbjct: 166 SKRISDAVALVDQM 179
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
+LR+ + + D I LF + S P + + K + A K+ + I E M G
Sbjct: 654 VLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILG 713
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
I N++ YN+LI C+ R+ A L +M K VT NSL++G+C + A
Sbjct: 714 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 773
Query: 267 NLRERM 272
L ++M
Sbjct: 774 ALVDQM 779
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 57/121 (47%)
Query: 103 LLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
L +V + L + C++K + + EL+ + + G + L+ + D
Sbjct: 995 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 1054
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+F ++ G P+ +TY + K G + K + + E + + + P+++ YN++I G+C
Sbjct: 1055 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 1114
Query: 223 K 223
K
Sbjct: 1115 K 1115
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 90/165 (54%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L + C+ +S+A L ++ G FP + + N+L+ + + +E+ + D
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
+G PD TY + K +E ++M ++G PN+F +N+L+ LC+ R++ +
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
A L +EM + + VT+ +LIDG+CK G++D A+ L +M++
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
++ LL +C SK + E Y + G P L + N+LL SL +++ D+ + L E+
Sbjct: 499 YNSLLNGLCKTSK-FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKR-GIRPNVFIYNVLIGGLCKERR 226
++ PD +T+G + K GD++ L M + + + YN++I ++
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
+ AEKLF EM R L TY ++DG+CK G V+ +
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ +++L++ +C SK L ++ +G P + N L+ +
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVN-EGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ +GF PD+ TY + G+ N+ + L +GI+PNV +YN LI GL +
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
I +A +L +EM ++ L+ T+N L++G CK+G V A L + M
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLV---DFKQFDKVIELFMEIQDSGFRP 174
E +E EL+ + G L + N LLR L D K+ +K+++ ++ G P
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD---KVIKRGVLP 249
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
+ TY +Q + G+++ + ++ + ++G +P+V YN LI GLCK + +AE
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+M L + TYN+LI GYCK G V A
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L V C+ + E +L + + G P L + N+ ++ L + D + + + + G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
+PD +TY + K + L M G+ P+ + YN LI G CK + AE
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
++ + V TY SLIDG C GE ++A L
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%)
Query: 121 MLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYG 180
M+ EA +L + + G P + + N+L+ L L + G+ PD T+
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
+ + +E+L+ M G+ P+V+ YN L+ GLCK + D + + M ++
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ T+N L++ C+ ++D+A L E MK ++V
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 35/165 (21%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + S N ++ LVD FD+ +++M ++D G PD ++ +++ K + + L
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 199 LESMTKRGIRPNVFIYNVLIGG-----------------------------------LCK 223
L +M+ +G NV Y ++GG LCK
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ + + EKL D++ KR ++ + TYN I G C+ GE+D A +
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 1/176 (0%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
Q + L+ +C E + + A L++ G P + N L++ L + + +L
Sbjct: 356 QFTYRSLIDGLCHEGET-NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA 414
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E+ + G P+ T+ V K+G V+ L++ M +G P++F +N+LI G +
Sbjct: 415 NEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ +A ++ D M + TYNSL++G CK + + + M ++ N
Sbjct: 475 LKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%)
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
ELF ++ SG T+ K ++ K GDV + +LL+ + KRG+ PN+F YN+ I GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
C+ + A ++ + ++ +TYN+LI G CK + +A +M E +E
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ M+ A + +G P + L+ L + ++ + LF E G +P+
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y ++ G + + +L M+++G+ P V +N+L+ GLCK + DA+ L
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M + T+N LI GY +++ A + + M V+
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 70/175 (40%)
Query: 103 LLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
L L +L C+ L A + + G P + + N L+ L +F +
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV 307
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
++ + G PD TY + K G V ++ G P+ F Y LI GLC
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
E A LF+E + + + + YN+LI G G + +A L M ++ +
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+ N+++ + + +LF E+ D PD TY V K G+VN G + L M
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLID 254
+ G P++ +I LC E R+ +A + M ++ LV V N++ D
Sbjct: 664 MENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTICD 713
>AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025) |
chr4:10868400-10870382 REVERSE
Length = 660
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N+++++L + D+ IE+F + + PD TY + K +++ + LL+ M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
G P+ IYNVLI GLCK+ + KL D M+ + V + VTYN+LI G C G++
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 263 DKAFNLRERM 272
DKA +L ERM
Sbjct: 309 DKAVSLLERM 318
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
V ++L C+ L+ T+L + G P + N L+ L + DK + L
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+ S P+ +TYG + VK + LL SM +RG N IY+VLI GL KE +
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+A L+ +M ++ + V Y+ L+DG C+ G+ ++A + RM
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 124 EATELYHLIRRDGKFP-ALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFR----PDKMT 178
+A +L+H + + + ++ S N +L +++ + + +E + + +S P+ ++
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLS 189
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
+ ++A KL V++ IE+ M +R P+ + Y L+ GLCKE RI +A L DEM
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
S V YN LIDG CK G++ + L + M
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
++ ++ L+ +C + K L +A L + P + L+ LV ++ + L
Sbjct: 292 EVTYNTLIHGLCLKGK-LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
+++ G+ ++ Y + K G + + L M ++G +PN+ +Y+VL+ GLC+E
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +A+++ + M + + TY+SL+ G+ K G ++A + + M K N
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+L+ C+ + + A E++ + P + L+ L ++ D+ + L E+Q
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G P + Y + K GD+ + +L+++M +G PN YN LI GLC + ++
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A L + M K + + VTY +LI+G K A L M++ +N
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
Q ++S L+ + E K EA L+ + G P + ++L+ L + ++ E+
Sbjct: 362 QHIYSVLISGLFKEGKA-EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
+ SG P+ TY ++ K G + +++ + M K G N F Y+VLI GLC
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
R+ +A ++ +M + TV Y+S+I G C +G +D A L M
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + + EA L ++ +G P+ N+L+ L +V +L + G P++
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + G ++K + LLE M PN Y LI GL K+RR DA +L
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M +R + Y+ LI G K G+ ++A +L +M ++ + N
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPN 396
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 4/170 (2%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V+S L+ +C E K +EA E+ + + G P + + L++ ++ ++++
Sbjct: 398 VVYSVLVDGLCREGKP-NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWK 456
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ +G +K Y + +G V + + + M GI+P+ Y+ +I GLC
Sbjct: 457 EMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIG 516
Query: 226 RIGDAEKLFDEMYKRKLVGS---TVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ A KL+ EM ++ S VTYN L+DG C ++ +A +L M
Sbjct: 517 SMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSM 566
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 158 DKVIELFMEIQDSGFRPDKM--TYGKAVQAAVKLGDVNKGIE----LLESMTKRGIRPNV 211
DK ++LF + D FR + ++ + + G ++G+E ++ S I PN
Sbjct: 129 DKAVDLFHRMVDE-FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187
Query: 212 FIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRER 271
+N++I LCK R + A ++F M +RK + TY +L+DG CK +D+A L +
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 272 MKKE 275
M+ E
Sbjct: 248 MQSE 251
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + EA +L+H + G P + L+ + + +G P+
Sbjct: 840 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 899
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + K GD++ ELL M K G++PN+F YN ++ GLCK I +A KL E
Sbjct: 900 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 959
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
L TVTY +L+D YCK GE+DKA + + M
Sbjct: 960 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Query: 137 KFPALG------SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG 190
+FP +G S N+++ + + + L + ++ G+ PD ++Y V + G
Sbjct: 679 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
+++K +L+E M ++G++PN +IY +IG LC+ ++ +AE+ F EM ++ ++ TV Y
Sbjct: 739 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 798
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENV 277
+LIDG+CK G++ A M ++
Sbjct: 799 TLIDGFCKRGDIRAASKFFYEMHSRDI 825
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+++ C+ + EA L L+ G P + S + ++ F + DKV +L ++
Sbjct: 693 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 752
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G +P+ YG + ++ + + E M ++GI P+ +Y LI G CK I
Sbjct: 753 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 812
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
A K F EM+ R + +TY ++I G+C++G++ +A L M
Sbjct: 813 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ L+ +C E L A EL H + + G P + + N ++ L ++ ++L
Sbjct: 900 VTYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E + +G D +TY + A K G+++K E+L+ M +G++P + +NVL+ G C
Sbjct: 959 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYC 257
+ D EKL + M + + + T+NSL+ YC
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C L + +L +++R G P ++ L + + E F E+ G PD
Sbjct: 735 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 794
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + K GD+ + M R I P+V Y +I G C+ + +A KLF E
Sbjct: 795 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 854
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M+ + L +VT+ LI+GYCK G + AF + M + N
Sbjct: 855 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 898
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ + C L+EA E + + R G P L+ + F E+
Sbjct: 765 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 824
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD +TY + ++GD+ + +L M +G+ P+ + LI G CK + DA
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ + M + + VTY +LIDG CK G++D A L M K ++ N
Sbjct: 885 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 933
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ + +A +++ + + G P + + L+ L D EL E+ G +P+
Sbjct: 875 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY V K G++ + ++L+ G+ + Y L+ CK + A+++ E
Sbjct: 935 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 994
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + L + VT+N L++G+C G ++ L M + + N
Sbjct: 995 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1038
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L C+S + +A E+ + G P + + N+L+ + +L + G
Sbjct: 975 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ T+ V+ ++ + + M RG+ P+ Y L+ G CK R + +A
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 1094
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
LF EM + S TY+ LI G+ K + +A + ++M++E +
Sbjct: 1095 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 206 GIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
G+ NV YN++I +C+ RI +A L M + ++Y+++++GYC+ GE+DK
Sbjct: 684 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 743
Query: 266 FNLRERMKKENVEMN 280
+ L E MK++ ++ N
Sbjct: 744 WKLIEVMKRKGLKPN 758
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V ++L + C ML + +L + + G P + N L++ ++
Sbjct: 1004 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 1063
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ G PD TY V+ K ++ + L + M +G +V Y+VLI G K +
Sbjct: 1064 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 1123
Query: 226 RIGDAEKLFDEMYKRKLVG 244
+ +A ++FD+M + L
Sbjct: 1124 KFLEAREVFDQMRREGLAA 1142
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + EA +L+H + G P + L+ + + +G P+
Sbjct: 840 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 899
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + K GD++ ELL M K G++PN+F YN ++ GLCK I +A KL E
Sbjct: 900 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 959
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
L TVTY +L+D YCK GE+DKA + + M
Sbjct: 960 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Query: 137 KFPALG------SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG 190
+FP +G S N+++ + + + L + ++ G+ PD ++Y V + G
Sbjct: 679 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
+++K +L+E M ++G++PN +IY +IG LC+ ++ +AE+ F EM ++ ++ TV Y
Sbjct: 739 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 798
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENV 277
+LIDG+CK G++ A M ++
Sbjct: 799 TLIDGFCKRGDIRAASKFFYEMHSRDI 825
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+++ C+ + EA L L+ G P + S + ++ F + DKV +L ++
Sbjct: 693 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 752
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G +P+ YG + ++ + + E M ++GI P+ +Y LI G CK I
Sbjct: 753 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 812
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
A K F EM+ R + +TY ++I G+C++G++ +A L M
Sbjct: 813 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ L+ +C E L A EL H + + G P + + N ++ L ++ ++L
Sbjct: 900 VTYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E + +G D +TY + A K G+++K E+L+ M +G++P + +NVL+ G C
Sbjct: 959 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYC 257
+ D EKL + M + + + T+NSL+ YC
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C L + +L +++R G P ++ L + + E F E+ G PD
Sbjct: 735 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 794
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + K GD+ + M R I P+V Y +I G C+ + +A KLF E
Sbjct: 795 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 854
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M+ + L +VT+ LI+GYCK G + AF + M + N
Sbjct: 855 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 898
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ + C L+EA E + + R G P L+ + F E+
Sbjct: 765 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 824
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD +TY + ++GD+ + +L M +G+ P+ + LI G CK + DA
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ + M + + VTY +LIDG CK G++D A L M K ++ N
Sbjct: 885 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 933
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ + +A +++ + + G P + + L+ L D EL E+ G +P+
Sbjct: 875 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY V K G++ + ++L+ G+ + Y L+ CK + A+++ E
Sbjct: 935 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 994
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + L + VT+N L++G+C G ++ L M + + N
Sbjct: 995 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1038
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L C+S + +A E+ + G P + + N+L+ + +L + G
Sbjct: 975 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ T+ V+ ++ + + M RG+ P+ Y L+ G CK R + +A
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 1094
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
LF EM + S TY+ LI G+ K + +A + ++M++E +
Sbjct: 1095 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 206 GIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
G+ NV YN++I +C+ RI +A L M + ++Y+++++GYC+ GE+DK
Sbjct: 684 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 743
Query: 266 FNLRERMKKENVEMN 280
+ L E MK++ ++ N
Sbjct: 744 WKLIEVMKRKGLKPN 758
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V ++L + C ML + +L + + G P + N L++ ++
Sbjct: 1004 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 1063
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ G PD TY V+ K ++ + L + M +G +V Y+VLI G K +
Sbjct: 1064 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 1123
Query: 226 RIGDAEKLFDEMYKRKLVG 244
+ +A ++FD+M + L
Sbjct: 1124 KFLEAREVFDQMRREGLAA 1142
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 89/165 (53%), Gaps = 1/165 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKF-PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPD 175
C L +A +++ ++ ++ P S ++L+ L + + ++ L ++ + G +P
Sbjct: 241 CRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPS 300
Query: 176 KMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD 235
TY ++A G ++K L + M RG +PNV Y VLI GLC++ +I +A +
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR 360
Query: 236 EMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+M K ++ S +TYN+LI+GYCK G V AF L M+K + N
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE L EA L + G P+ + +L+++L D DK LF E+ G +P+
Sbjct: 277 CEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV 336
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + + G + + + M K I P+V YN LI G CK+ R+ A +L
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTV 396
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M KR + T+N L++G C+VG+ KA +L +RM
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
SLN++L L + + + + +I G P +TY V ++ GD+ +LE M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
G PNV+ Y ++I GLC+ R+ +AEKL M + + VTY ++ GY G++
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 263 DKAFNLRERMKKENVEMN 280
D+A M + E+N
Sbjct: 668 DRALETVRAMVERGYELN 685
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + EA + + +D FP++ + N L+ + EL ++ +P+
Sbjct: 347 CRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
T+ + ++ ++G K + LL+ M G+ P++ YNVLI GLC+E + A KL
Sbjct: 407 RTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSS 466
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + +T+ ++I+ +CK G+ D A M ++ + ++
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + A EL ++ + P + + N L+ L + K + L + D+G PD
Sbjct: 382 CKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
++Y + + G +N +LL SM I P+ + +I CK+ + A
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M ++ + VT +LIDG CKVG+ A + E + K +
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Query: 138 FPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIE 197
+P SL M L L D V + ++ GF + Y V A K G
Sbjct: 160 YPCYSSLLMSLAKL-DLGFLAYVT--YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEM 216
Query: 198 LLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG-STVTYNSLIDGY 256
+ + K G + I L+ G C+ + DA K+FD M K ++V+Y+ LI G
Sbjct: 217 FMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGL 276
Query: 257 CKVGEVDKAFNLRERMKKENVE 278
C+VG +++AF L+++M ++ +
Sbjct: 277 CEVGRLEEAFGLKDQMGEKGCQ 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 71/182 (39%), Gaps = 38/182 (20%)
Query: 130 HLIRR---DGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAA 186
HL++R +G P + S N+L+ L + +L + PD +T+ + A
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 187 VKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK----- 241
K G + L M ++GI + LI G+CK + DA + + + K +
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 242 ------------------------------LVGSTVTYNSLIDGYCKVGEVDKAFNLRER 271
LV S VTY +L+DG + G++ +F + E
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 272 MK 273
MK
Sbjct: 607 MK 608
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
+ L++ G P + +++ L F + ++ +L +QDSG P+ +TY V+ V
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGG 220
G +++ +E + +M +RG N IY+ L+ G
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P L + N+L+ +++F E+ D +P+ ++Y + G +++ I +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
+ M G++PN+ YN LI G CK + +A +F + + V +T YN LID YCK
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Query: 259 VGEVDKAFNLRERMKKENV 277
+G++D F L+E M++E +
Sbjct: 414 LGKIDDGFALKEEMEREGI 432
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L + C +SEA + + G P L + N L+ + +++F ++ G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P Y + A KLG ++ G L E M + GI P+V YN LI GLC+ I A+
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
KLFD++ + L VT++ L++GYC+ GE KA L + M K
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
L+ + L + C++ ML EA +++ ++ G P NML+ + + D L
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E++ G PD TY + + G++ +L + +T +G+ P++ +++L+ G C++
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRK 483
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
A L EM K L +TYN ++ GYCK G + A N+R +M+KE
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 85/153 (55%), Gaps = 4/153 (2%)
Query: 131 LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG 190
+IRR + P + + N+++ +L + +K ++ +++ G P+ ++Y + KLG
Sbjct: 214 MIRRKIQ-PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Query: 191 D---VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
+ K +L+ M + + PN+ +N+LI G K+ + + K+F EM + + + +
Sbjct: 273 GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+YNSLI+G C G++ +A ++R++M V+ N
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPN 365
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L C+ + + L + R+G P +G+ N L+ L + +LF ++
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G PD +T+ ++ + G+ K LL+ M+K G++P YN+++ G CKE +
Sbjct: 465 KGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 230 AEKLFDEMYK-RKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
A + +M K R+L + +YN L+ GY + G+++ A L M
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + S N L+ L + + + I + ++ +G +P+ +TY + K + + +++
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
S+ +G P +YN+LI CK +I D L +EM + +V TYN LI G C+
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 259 VGEVDKAFNLRERM 272
G ++ A L +++
Sbjct: 449 NGNIEAAKKLFDQL 462
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+ L + C + + A +L+ + G P L + ++L+ + K L E+
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK-RGIRPNVFIYNVLIGGLCKERRIG 228
G +P +TY ++ K G++ + M K R +R NV YNVL+ G ++ ++
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 229 DAEKLFDEMYKRKLVGSTVTY 249
DA L +EM ++ LV + +TY
Sbjct: 559 DANMLLNEMLEKGLVPNRITY 579
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+V L CC+ + +A +L+ + + G + +L+ L + E++
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++Q+ G P+ TY + K G ++ + M +RG+ N+ YN LIGGLC+E
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
++ +A K+ D+M + + +TYN+LIDG+C VG++ KA +L +K
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 90/170 (52%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L CCE+ + ++ +L + G P + L+ + +K +LF E+
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G ++ TY + K G +G E+ E M + G+ PN++ YN ++ LCK+ R DA
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++FDEM +R + + VTYN+LI G C+ ++++A + ++MK + + N
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 80/155 (51%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
+ E+Y ++ DG FP L + N ++ L + ++F E+++ G + +TY +
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
+ +N+ ++++ M GI PN+ YN LI G C ++G A L ++ R L
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
S VTYN L+ G+C+ G+ A + + M++ ++
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 89/176 (50%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
L+ + L C L +A L ++ G P+L + N+L+ ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E+++ G +P K+TY + + ++ K I+L SM + G+ P+V Y+VLI G C +
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ +A +LF M ++ + V YN++I GYCK G +A L + M+++ + N
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPN 512
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ L+ +C E K L+EA ++ ++ DG P L + N L+ + K + L
Sbjct: 304 VTYNTLIGGLCREMK-LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+++ G P +TY V + GD + ++++ M +RGI+P+ Y +LI +
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ A +L M + LV TY+ LI G+C G++++A L + M ++N E N
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ +A +++ +R G + + N L+ L + ++ ++ +++ G P+
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + +G + K + L + RG+ P++ YN+L+ G C++ A K+ E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
M +R + S VTY LID + + ++KA LR M++
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV ++L S C S A ++ + G P+ + +L+ + +K I+L +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+++ G PD TY + G +N+ L +SM ++ PN IYN +I G CKE
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
A KL EM +++L + +Y +I+ CK + +A L E+M
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L S + +A +L + G P + + ++L+ Q ++ LF + +
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
P+++ Y + K G + ++LL+ M ++ + PNV Y +I LCKER+ +A
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Query: 231 EKLFDEMYKRKLVGST 246
E+L ++M + ST
Sbjct: 533 ERLVEKMIDSGIDPST 548
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V + + C K +++A L+ + G P + + N L+R L ++ ++ L
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ + P+ +T+ + A VK G + + +L + M KR I P++F Y+ LI G C
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ +A+ +F+ M + + VTYN+LI G+CK VD+ L M + + N
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 75/134 (55%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + N ++ +L ++K + + LF E+ + G RP+ +TY ++ G + L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
L M +R I PNV ++ LI KE ++ +AEKL+DEM KR + TY+SLI+G+C
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 259 VGEVDKAFNLRERM 272
+D+A ++ E M
Sbjct: 374 HDRLDEAKHMFELM 387
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C +S+A L + G P + N L+ L + + + L + G +PD
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TYG V K GD++ + LL+ M + I P V IYN +I LC + + DA LF E
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + + VTYNSLI C G A L M + + N
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%)
Query: 123 SEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
SEA L + G P L + +++ L D + L +++ P + Y
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
+ A +VN + L M +GIRPNV YN LI LC R DA +L +M +RK+
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 243 VGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ VT+++LID + K G++ +A L + M K +++
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+S L+ C + L EA ++ L+ FP + + N L++ K+ D+ +ELF
Sbjct: 362 FTYSSLINGFCMHDR-LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G + +TY + + + + + + M G+ P++ Y++L+ GLC
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ A +F+ + + K+ TYN +I+G CK G+V+ ++L + + V+ N
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L + C LS A + + + G P + +LN LL + + L ++ +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G++PD T+ + + ++ + L++ M +G +P++ Y +++ GLCK I A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
L +M + K+ V YN++ID C V+ A NL M + + N
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++K + E EL+ + + G + L+ ++ D +F ++ G PD
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
MTY + G V + + E + + + P+++ YN++I G+CK ++ D LF
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + + VTY +++ G+C+ G ++A L MK+E
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%)
Query: 135 DGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNK 194
DG P + + ++LL L + + + + +F +Q S PD TY ++ K G V
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 195 GIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLID 254
G +L S++ +G++PNV Y ++ G C++ +A+ LF EM + + + TYN+LI
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 255 GYCKVGEVDKAFNLRERMK 273
+ + G+ + L M+
Sbjct: 580 AHLRDGDKAASAELIREMR 598
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L +A L+ + + FP++ + LL ++ +FD VI L ++Q+ G + TY
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + ++ + +L M K G P++ N L+ G C RI DA L +M +
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ T+N+LI G + +A L +RM
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
+ D + LF ++ S P + + K + A K+ + I L E M GI N++ Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+LI C+ ++ A + +M K VT NSL++G+C + A +L +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 87/164 (53%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + E +++ +R P L + ++ DK + F ++++G PD
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y +Q + G ++ + L M ++G +V YN ++ GLCK + +G+A+KLF+E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M +R L + T LIDG+CK+G + A L ++MK++ + ++
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ KML EA +L++ + FP +L +L+ +ELF ++++ R D
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + K+GD++ E+ M + I P Y++L+ LC + + +A +++DE
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
M + + + + NS+I GYC+ G + E+M E
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 79/153 (51%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A +Y I R G + +LN+++ +L + +KV ++Q+ G PD +TY +
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
A G + + EL+ +M +G P V+ YN +I GLCK + A+++F EM + L
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ TY SL+ CK G+V + + M+ +V
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V + L S ++ EA EL + + G P + + N ++ L ++++ E+F
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ SG PD TY + A K GDV + ++ M R + P++ ++ ++ +
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ A F+ + + L+ V Y LI GYC+ G + A NLR M ++ M+
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
V +L C M+S A L + + + G + + N +L L K + +LF E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+ + PD T + KLG++ +EL + M ++ IR +V YN L+ G K
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
I A++++ +M ++++ + ++Y+ L++ C G + +AF + + M +N++
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
DLL +++ L EA E + L+R G ++ + N L+ SLV + ++ EI
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
SG + T V A K G + K L + ++G+ P++ YN LI + + +
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
A +L + M + TYN++I+G CK G+ ++A
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 112 LFSVCCESKMLSEATE-LYHLIRRDG------------KFPALGS----LNMLLRSLVDF 154
+ + S LS+A L +IRR G F GS ++L+R+ V
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQA 178
Query: 155 KQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIY 214
++ + E F ++ GF + + V++G V + + +++ G+ NV+
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 215 NVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
N+++ LCK+ ++ ++ ++ + VTYN+LI Y G +++AF L M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 111 LLFSVCCESKMLSEATELY-HLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+L + C L+EA ++ +I ++ K P + N +++ ++
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIK-PTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKR--GIRPNVFIYNVLIGGLCKERRI 227
GF PD ++Y + V+ +++K L++ M + G+ P+VF YN ++ G C++ ++
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+AE + +M +R + TY +I+G+ + +AF + + M
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ A E++ + P S ++L+ +L + ++ E+ +P M
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++ + G+ + G LE M G P+ YN LI G +E + A L +M + +
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 242 --LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
LV TYNS++ G+C+ ++ +A + +M + V
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 2/126 (1%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF--MEIQDSGFRP 174
C S S+ + +G P S N L+ V + K L ME + G P
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
D TY + + + + +L M +RG+ P+ Y +I G + + +A ++
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715
Query: 235 DEMYKR 240
DEM +R
Sbjct: 716 DEMLQR 721
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
+L LV ++FD V + + G PD Y Q K G +K +LL+ MT G
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
I+PNV+IY + I LC++ ++ +AEK+F+ M K ++ + TY+++IDGYCK G V +A+
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 267 NL 268
L
Sbjct: 290 GL 291
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ + +A LY I P + L+ ++ LF+ + G P+
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
Y + K G++ + + LL M + P+VF Y +LI GLC E ++ +A +LF +
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M ++ S+ TYNSLI GYCK +++A +L M VE N
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+S + EA L + P + + +L+ L Q + LF ++++ P
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS 409
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + K ++ + ++L MT G+ PN+ ++ LI G C R I A L+ E
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + +V VTY +LID + K + +A L M + + N
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPN 513
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
++ L+ +C E + ++EA L+ ++ + FP+ + N L+ ++ ++L E+
Sbjct: 377 YTILINGLCIEDQ-VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
SG P+ +T+ + + D+ + L MT +GI P+V Y LI KE +
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRE 270
+A +L+ +M + + + T+ L+DG+ K G + A + +
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQ 538
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+LF C + + S+ +L + G P + + + L + ++ ++F ++
Sbjct: 204 VLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKH 263
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G P+ TY + K G+V + L + + + PNV ++ L+ G CK R + A
Sbjct: 264 GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
LF M K + + YN LI G+CK G + +A L M+ N+
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
++ L+ C E M +A +L + G P + + + L+ + + + L+ E+
Sbjct: 412 YNSLIHGYCKEYNM-EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
G PD +TY + A K ++ + + L M + GI PN + L+ G KE R+
Sbjct: 471 TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
A + E +++ + V + LI+G C+ G + +A
Sbjct: 531 SVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRA 568
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ +S ++ S C + L +I R P + + + L+ +LV + + E++
Sbjct: 112 ITYSGMIDSFCRSGRWTDAEQLLRDMIERQIN-PDVVTFSALINALVKEGKVSEAEEIYG 170
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ G P +TY + K +N +L+SM + P+V ++ LI G CK +
Sbjct: 171 DMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK 230
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ + ++F EM++R +V +TVTY +LI G+C+VG++D A +L M V N
Sbjct: 231 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+V + + C+ A L+ + G FP + + + ++ S ++ +L
Sbjct: 75 HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLL 134
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++ + PD +T+ + A VK G V++ E+ M +RGI P YN +I G CK+
Sbjct: 135 RDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQ 194
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ DA+++ D M + VT+++LI+GYCK VD + M + + N
Sbjct: 195 DRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 250
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ ++ E K +SEA E+Y + R G FP + N ++ + + +
Sbjct: 147 VTFSALINALVKEGK-VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLD 205
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ PD +T+ + K V+ G+E+ M +RGI N Y LI G C+
Sbjct: 206 SMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ A+ L + M + + +T+ S++ C E+ KAF + E ++K
Sbjct: 266 DLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + + L+ L + + + L + + G +P YG + K+GD
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+ LL M + I+ +V IYN +I LCK+ A+ LF EM+ + + +TY+ +ID
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 256 YCKVGEVDKAFNLRERMKKENV 277
+C+ G A L M + +
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQI 142
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ F+ L+ +CCE ++L +A L + +G P ++ L + + L
Sbjct: 11 VTFTTLMNGLCCEGRVL-QALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLS 65
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+++++ + + Y + K G L M +GI P+V Y+ +I C+
Sbjct: 66 KMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSG 125
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
R DAE+L +M +R++ VT+++LI+ K G+V +A
Sbjct: 126 RWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 202 MTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
M + G RP+V + L+ GLC E R+ A L D M + Y ++I+G CK+G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEE----GHQPYGTIINGLCKMGD 56
Query: 262 VDKAFNLRERMKKENVE 278
+ A NL +M++ +++
Sbjct: 57 TESALNLLSKMEETHIK 73
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V + L C E + EA +L + DG + N+ L+ L ++ + V
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 166 EIQD-SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E+ D GF PD +TY ++A +K+GD++ +E++ M ++GI+ N N ++ LCKE
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
R++ +A L + +KR + VTY +LI G+ + +V+KA + + MKK
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
LS A E+ + + G +LN +L +L ++ D+ L GF D++TYG
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + V K +E+ + M K I P V +N LIGGLC + A + FDE+ +
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAF 266
L+ T+NS+I GYCK G V+KAF
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAF 576
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
F+ L+ C E K+ L ++ P + N +L+++ + + EL ++
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
++ +G P+++TY V KLG + + +++E M + + P++ YN+LI GLC
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ + +L D M KL VTYN+LIDG ++G +A L E+M+ + V+ N
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN 379
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ +A E++ +++ P + + N L+ L + + +E F E+ +SG PD T+
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ K G V K E K +P+ + N+L+ GLCKE A F+ + + +
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
V TVTYN++I +CK ++ +A++L M+++ +E
Sbjct: 622 EV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLE 657
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
++ +++L++ C + L EA ++ L+++ P L + N+L+ L + + +EL
Sbjct: 275 RVTYNNLVYGYC-KLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM 333
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK- 223
++ +PD +TY + +LG + +L+E M G++ N +N+ + LCK
Sbjct: 334 DAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKE 393
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
E+R K+ + + VTY++LI Y KVG++ A + M ++ ++MN
Sbjct: 394 EKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 174 PDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK---ERRIGDA 230
P K + A+ A + G + +++ + M + ++PN+ N L+ GL + I A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
++FD+M K + + T+N L++GYC G+++ A + ERM E
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE 233
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 96/175 (54%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ L+ C + K +++A LYH + G P++ + LL L ++LF
Sbjct: 473 VTYTSLMGGYCSKGK-INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ + +P+++TY ++ + GD++K E L+ MT++GI P+ + Y LI GLC
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +A+ D ++K + + Y L+ G+C+ G++++A ++ + M + V+++
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 77/142 (54%)
Query: 131 LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG 190
+I + P + +L+ LL LV F+ F +ELF ++ G RPD Y +++ +L
Sbjct: 182 MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
D+++ E++ M G N+ YNVLI GLCK++++ +A + ++ + L VTY
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301
Query: 251 SLIDGYCKVGEVDKAFNLRERM 272
+L+ G CKV E + + + M
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEM 323
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ EA L + G P L N L+ SL ++F + LF + G RP+ +TY
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + G ++ + L M G++ +V+ YN LI G CK I AE EM +K
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
L + VTY SL+ GYC G+++KA L M + +
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYH-LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
+ +V ++L C+ + + EA + L +D K P + + L+ L ++F+ +E
Sbjct: 260 VNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLK-PDVVTYCTLVYGLCKVQEFEIGLE 318
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+ E+ F P + V+ K G + + + L++ + G+ PN+F+YN LI LC
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
K R+ +AE LFD M K L + VTY+ LID +C+ G++D A + M
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N L+ F E+ + P +TY + G +NK + L MT
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
+GI P+++ + L+ GL + I DA KLF+EM + + + VTYN +I+GYC+ G++ K
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 265 AFNLRERMKKENV 277
AF + M ++ +
Sbjct: 561 AFEFLKEMTEKGI 573
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ +A EL++ I + G + NML+R + ++ EL + G PD +TY
Sbjct: 769 MQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTT 827
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + DV K IEL SMT++GIRP+ YN LI G C +G A +L +EM ++
Sbjct: 828 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Query: 242 LV 243
L+
Sbjct: 888 LI 889
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + L+ + +K + L+ E+ G P T+ + + G + ++L
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M + ++PN YNV+I G C+E + A + EM ++ +V T +Y LI G C
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 259 VGEVDKAFNLRERMKKENVEMN 280
G+ +A + + K N E+N
Sbjct: 590 TGQASEAKVFVDGLHKGNCELN 611
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
V++ L+ S+C + + EA L+ + + G P + ++L+ + D +
Sbjct: 368 FVYNALIDSLC-KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ D+G + Y + K GD++ + M + + P V Y L+GG C +
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+I A +L+ EM + + S T+ +L+ G + G + A L M + NV+ N
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 82/208 (39%), Gaps = 36/208 (17%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
++ ++ LL C E K L EA + + + G L +L+ + K L
Sbjct: 612 EICYTGLLHGFCREGK-LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E+ D G +PD + Y + A K GD + + + M G PN Y +I GLCK
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 225 RRIGDAEKLFDEMYK-----------------------------------RKLVGSTVTY 249
+ +AE L +M + L+ +T TY
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 250 NSLIDGYCKVGEVDKAFNLRERMKKENV 277
N LI G+C+ G +++A L RM + V
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGV 818
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
L++L + VD + K +EL I G + TY ++ + G + + EL+ M
Sbjct: 759 LDILTKGEVDMQ---KAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
G+ P+ Y +I LC+ + A +L++ M ++ + V YN+LI G C GE+
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 264 KAFNLRERMKKENVEMN 280
KA LR M ++ + N
Sbjct: 875 KATELRNEMLRQGLIPN 891
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 155 KQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIY 214
+ D V+ M I P+ T + VK +EL M GIRP+V+IY
Sbjct: 171 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIY 230
Query: 215 NVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+I LC+ + + A+++ M + V YN LIDG CK +V +A +++ +
Sbjct: 231 TGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAG 290
Query: 275 ENVE 278
++++
Sbjct: 291 KDLK 294
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + EA+EL + DG P + ++ L K IEL+ + + G RPD+
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPN 210
+ Y + G++ K EL M ++G+ PN
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ +C E + +SEA EL + G P L +LN L+ L + + L
Sbjct: 143 VTFSTLINGLCLEGR-VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLID 201
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ ++GF+P+++TYG ++ K G +ELL M +R I+ + Y+++I GLCK+
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ +A LF+EM + + Y +LI G+C G D L M K +
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++++ L+ C + A L +I+R P + + + L+ V + + EL
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRK-ITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G PD +TY + K ++K +L+ M +G PN+ +N+LI G CK
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
I D +LF +M R +V TVTYN+LI G+C++G+++ A L + M V
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 112 LFSVCCESKMLSEATELYH-LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+ V C+S + A EL + R K A+ ++++ L D LF E++
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAV-KYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
GF+ D + Y ++ G + G +LL M KR I P+V ++ LI KE ++ +A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
E+L EM +R + TVTY SLIDG+CK ++DKA ++ + M
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ E K L EA EL+ + + G P + L+ Q DK +
Sbjct: 318 VAFSALIDCFVKEGK-LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ G P+ T+ + K ++ G+EL M+ RG+ + YN LI G C+
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ A++LF EM R++ V+Y L+DG C GE +KA + E+++K +E++
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L +A + L+ G P + + N+L+ D +ELF ++ G D
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY +Q +LG + EL + M R +RP++ Y +L+ GLC A ++F++
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ K K+ YN +I G C +VD A++L
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE L A EL+ + P + S +LL L D + +K +E+F +I+ S D
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
Y + V+ +L S+ +G++P+V YN++IGGLCK+ + +A+ LF +
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
M + + TYN LI + G+ K+ L E +K+
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L + C++ ++ + EL+ + G + N L++ + + + ELF E+
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
RPD ++Y + G+ K +E+ E + K + ++ IYN++I G+C ++ D
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
A LF + + + TYN +I G CK G + +A L +M+++
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
++ + CC + LS A I + G P + + L+ L + + +EL + +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G +P +T V G V+ + L++ M + G +PN Y ++ +CK + A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+L +M +RK+ V Y+ +IDG CK G +D AFNL M+
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L A L++ + G + L+R ++D +L ++ PD
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ + + VK G + + EL + M +RGI P+ Y LI G CKE ++ A + D
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M + + T+N LI+GYCK +D L +M V
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 83/181 (45%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
S P +L+ LFSV +K +L + G L +L++++ ++
Sbjct: 66 SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSL 125
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
+I G+ PD +T+ + G V++ +EL++ M + G +P + N L+
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
GLC ++ DA L D M + + VTY ++ CK G+ A L +M++ +++
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 280 N 280
+
Sbjct: 246 D 246
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
+A +L+ + R P L + L + KQ+D V++L +++ G + T +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
+ ++ + + K G P+ ++ LI GLC E R+ +A +L D M +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +T N+L++G C G+V A L +RM + + N
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 148 LRS-LVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
LRS +VD K+ D ++LF E+ S RP + + + + + ++L + M +G
Sbjct: 44 LRSGIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKG 102
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
I N++ +++I C+ R++ A ++ K TVT+++LI+G C G V +A
Sbjct: 103 IAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEAL 162
Query: 267 NLRERM 272
L +RM
Sbjct: 163 ELVDRM 168
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ L+ C + A L +I+R P + + ++L+ S V + + EL
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN-PNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G PD +TY + K ++K ++++ M +G PN+ +N+LI G CK
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
RI D +LF +M R +V TVTYN+LI G+C++G+++ A L + M V N
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ +C E + +SEA EL + G P L ++N L+ L + + + L
Sbjct: 159 ITFSTLINGLCLEGR-VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 217
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ + G +P+ +TYG + K G +ELL M +R I+ + Y+++I GLCK
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +A LF+EM + + + +TYN LI G+C G D L M K + N
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Query: 112 LFSVCCESKMLSEATELYH-LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+ +V C+S + A EL + R+ K A+ ++++ L D LF E++
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAV-KYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G + +TY + G + G +LL M KR I PNV ++VLI KE ++ +A
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
E+L EM R + T+TY SLIDG+CK +DKA + + M + + N
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ S E K L EA EL+ + G P + L+ DK ++
Sbjct: 334 VTFSVLIDSFVKEGK-LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ G P+ T+ + K ++ G+EL M+ RG+ + YN LI G C+
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ A++LF EM RK+ + VTY L+DG C GE +KA + E+++K +E++
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L +A ++ L+ G P + + N+L+ + D +ELF ++ G D
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY +Q +LG +N EL + M R + PN+ Y +L+ GLC A ++F++
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ K K+ YN +I G C +VD A++L
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE L+ A EL+ + P + + +LL L D + +K +E+F +I+ S D
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
Y + V+ +L S+ +G++P V YN++IGGLCK+ + +AE LF +
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
M + TYN LI + G+ K+ L E +K+
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L A L++ + G + + N+L+ + ++D +L ++ P+
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + + VK G + + EL + M RGI P+ Y LI G CKE + A ++ D
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M + + T+N LI+GYCK +D L +M V
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
++ + C + L A I + G P + + L+ L + + +EL + +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G +PD +T V G + + L++ M + G +PN Y ++ +CK + A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+L +M +R + V Y+ +IDG CK G +D AFNL M+ + + N
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 85/181 (46%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
S PL ++ LFS ++K L + G L +L++++ ++
Sbjct: 82 SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCL 141
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
+I G+ P+ +T+ + G V++ +EL++ M + G +P++ N L+
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
GLC + +A L D+M + + VTY +++ CK G+ A L +M++ N+++
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 280 N 280
+
Sbjct: 262 D 262
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
+A +L+ + P + + L ++ KQ+D V+ L +++ G + T +
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
+ + + + K G PN ++ LI GLC E R+ +A +L D M +
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+T N+L++G C G+ +A L ++M + + N
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 227
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 148 LRS-LVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
LRS LVD K D I+LF ++ S P + + + A K + + L + M +G
Sbjct: 60 LRSGLVDIKA-DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 118
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
I N++ +++I C+ R++ A ++ K +T+T+++LI+G C G V +A
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 267 NLRERM 272
L +RM
Sbjct: 179 ELVDRM 184
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
D LFSV + ML EA + + ++R FP S N LL + D V F ++
Sbjct: 64 DALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG 123
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
+G RP TY + K GDV L E M RG+ P+ YN +I G K R+ D
Sbjct: 124 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 183
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
F+EM +TYN+LI+ +CK G++ MK ++ N
Sbjct: 184 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 107 VFS-DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
VF+ +++ C+ + A L+ ++ G P + N ++ + D + F
Sbjct: 130 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 189
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E++D PD +TY + K G + G+E M G++PNV Y+ L+ CKE
Sbjct: 190 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 249
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ A K + +M + LV + TY SLID CK+G + AF L M + VE N
Sbjct: 250 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 304
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 67/135 (49%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P G + L L+D ++ I+ F +++ P + + KLG +
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
+ M G RP VF YN++I +CKE + A LF+EM R LV TVTYNS+IDG+ K
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177
Query: 259 VGEVDKAFNLRERMK 273
VG +D E MK
Sbjct: 178 VGRLDDTVCFFEEMK 192
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 87/173 (50%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++ + L + C+ L E Y ++ +G P + S + L+ + + I+ ++
Sbjct: 200 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 259
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+++ G P++ TY + A K+G+++ L M + G+ NV Y LI GLC
Sbjct: 260 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 319
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
R+ +AE+LF +M ++ + +YN+LI G+ K +D+A L +K ++
Sbjct: 320 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 372
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+++ + EA EL+ + G P L S N L+ V K D+ +EL E++ G +PD
Sbjct: 316 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 375
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ YG + L + ++ M + GI+ N IY L+ K + L DE
Sbjct: 376 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 435
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
M + + + VT+ LIDG CK V KA + R+ +
Sbjct: 436 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 474
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 89/168 (52%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L C+ LS+A L + + + G + + L+ L D ++ + ELF ++ +G
Sbjct: 276 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 335
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ +Y + VK ++++ +ELL + RGI+P++ +Y I GLC +I A+
Sbjct: 336 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 395
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
+ +EM + + +++ Y +L+D Y K G + +L + MK+ ++E+
Sbjct: 396 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 443
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + N L+ F + +E + E++ +G +P+ ++Y V A K G + + I+
Sbjct: 198 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 257
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M + G+ PN + Y LI CK + DA +L +EM + + + VTY +LIDG C
Sbjct: 258 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 317
Query: 259 VGEVDKAFNLRERMKKENV 277
+ +A L +M V
Sbjct: 318 AERMKEAEELFGKMDTAGV 336
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L C+ M+ +A + Y +RR G P + L+ + L E+ G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
+ +TY + + + EL M G+ PN+ YN LI G K + + A
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+L +E+ R + + Y + I G C + +++ A + MK+ ++ N
Sbjct: 361 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 409
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSL-NMLLRSLVDFKQFDKVIELFMEIQD 169
+L C++K++S+A + ++ I D A ++ ++ L Q + LF ++
Sbjct: 450 VLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 509
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G PD+ Y + K G+V + + L + M + G++ ++ Y L+ GL ++
Sbjct: 510 KGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQK 569
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
A +EM + V S++ + ++G +D+A L+ + K +
Sbjct: 570 ARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 617
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N ++ SL ++ D + LF E++ G RP+ +TY + G + +LL M +
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
+ I PN+ +N LI KE + +AEKL+D+M KR + TYNSL++G+C +DK
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 265 AFNLRERM 272
A + E M
Sbjct: 384 AKQMFEFM 391
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L + C +S A L + + G P++ +L+ LL K+ + L ++ +
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G+RPD +T+ + ++ + L++ M +RG +PN+ Y V++ GLCK
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A L ++M K+ V +N++ID CK VD A NL + M+ + + N
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C L +A +++ + FP + + N L++ K+ + ELF E+ G D
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY +Q GD + ++ + M G+ P++ Y++L+ GLC ++ A ++FD
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M K ++ Y ++I+G CK G+VD ++L + + V+ N
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S C S+A++L + P L + N L+ + V +F + +L+ ++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD TY V ++K ++ E M + P+V YN LI G CK +R+ D
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+LF EM R LVG TVTY +LI G G+ D A + ++M + V
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++F+ ++ S+C + + + +A L+ + G P + + + L+ L + ++ +L
Sbjct: 261 VIFNTIIDSLC-KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ + P+ +T+ + A VK G + +L + M KR I P++F YN L+ G C
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
R+ A+++F+ M + VTYN+LI G+CK V+ L M
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C K +S+A L + G P + L+ L + + + L + G +P+
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TYG V K GD + + LL M I +V I+N +I LCK R + DA LF E
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + + VTY+SLI C G A L M ++ + N
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+SK + + TEL+ + G + L++ L D ++F ++ G PD
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
MTY + G + K +E+ + M K I+ +++IY +I G+CK ++ D LF
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + + VTYN++I G C + +A+ L ++MK++
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 81/149 (54%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A +++ + DG P + + ++LL L + + +K +E+F +Q S + D Y ++
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
K G V+ G +L S++ +G++PNV YN +I GLC +R + +A L +M + +
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMK 273
++ TYN+LI + + G+ + L M+
Sbjct: 574 NSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ F+ L+ + +K SEA L + + G P L + +++ L D + L
Sbjct: 191 ITFTTLIHGLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+++ + D + + + + K V+ + L + M +GIRPNV Y+ LI LC
Sbjct: 250 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
R DA +L +M ++K+ + VT+N+LID + K G+ +A L + M K +++
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
S PL +V + L S + K L ++R L + N+L+ Q
Sbjct: 79 SRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISL 138
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
+ L ++ G+ P +T + ++ + L++ M + G RP+ + LI
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
GL + +A L D M +R + VTY +++G CK G+ D A NL +M+ +E
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 280 N 280
+
Sbjct: 259 D 259
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L +A L+ + + P++ N LL ++ K+FD VI L ++Q TY
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + ++ + LL M K G P++ + L+ G C +RI DA L D+M +
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
T+T+ +LI G + +A L +RM + + N
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 142 GSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLES 201
G +LR+ + + D I LF + S P + + K + A K+ + I L E
Sbjct: 51 GDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEK 110
Query: 202 MTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
M + I ++ YN+LI C+ +I A L +M K S VT +SL++GYC
Sbjct: 111 MQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 262 VDKAFNLRERM 272
+ A L ++M
Sbjct: 171 ISDAVALVDQM 181
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+S L+ C + L EA ++ L+ FP + + N L+ K+ D+ +ELF
Sbjct: 366 FTYSSLINGFCMHDR-LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G + +TY + + D + + + M G+ PN+ YN L+ GLCK
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
++ A +F+ + + K+ + TYN +I+G CK G+V+ ++L
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
++ SL ++ D + LF E+++ G RP+ +TY + + LL M +R
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
I PNV +N LI KE ++ +AEKL+DEM KR + TY+SLI+G+C +D+A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 267 NLRERM 272
++ E M
Sbjct: 386 HMFELM 391
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L + C +S A L + + G P++ +L+ LL K+ + L ++ +
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G+RPD +T+ + ++ + L++ M +RG +PN+ Y V++ GLCK I
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A L ++M K+ + V Y+++ID CK D A NL M+ + V N
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 93/175 (53%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+++S ++ S+C + + +A L+ + G P + + + L+ L +++++ L
Sbjct: 261 VIYSTVIDSLC-KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ + P+ +T+ + A VK G + + +L + M KR I P++F Y+ LI G C
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ +A+ +F+ M + + VTYN+LI+G+CK +D+ L M + + N
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S C + S+A+ L + P + + N L+ + V + + +L+ E+
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD TY + +++ + E M + PNV YN LI G CK +RI +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+LF EM +R LVG+TVTY +LI G+ + + D A + ++M + V N
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 78/159 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++K + E EL+ + + G + L+ + D +F ++ G P+
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
MTY + K G + K + + E + + + P ++ YN++I G+CK ++ D LF
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + + YN++I G+C+ G ++A L +M+++
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ F+ L+ + +K SEA L + + G P L + +++ L D L
Sbjct: 191 ITFTTLIHGLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+++ + + + Y + + K + + L M +G+RPNV Y+ LI LC
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
R DA +L +M +RK+ + VT+N+LID + K G++ +A L + M K +++
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C K +S+A L + G P + L+ L + + + L + G +P+
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TYG V K GD++ LL M I NV IY+ +I LCK R DA LF E
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + + +TY+SLI C A L M + + N
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
S L +A L+ + + P++ N LL ++ K+FD VI L ++Q G +
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
TY + + ++ + LL M K G P++ + L+ G C +RI DA L D+M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 238 Y-----------------------------------KRKLVGSTVTYNSLIDGYCKVGEV 262
+R + VTY +++G CK G++
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 263 DKAFNLRERMKKENVEMN 280
D AFNL +M+ +E N
Sbjct: 242 DLAFNLLNKMEAAKIEAN 259
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 142 GSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLES 201
G +LR+ + + D I LF + S P + K + A K+ + I L E
Sbjct: 51 GDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEK 110
Query: 202 MTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
M + GI N++ YN+LI C+ +I A L +M K S VT +SL++GYC
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 262 VDKAFNLRERM 272
+ A L ++M
Sbjct: 171 ISDAVALVDQM 181
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+S L+ C + L EA ++ L+ FP + + N L++ K+ ++ +ELF E+
Sbjct: 363 YSSLINGFCMHDR-LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
G + +TY +Q + GD + ++ + M G+ P++ Y++L+ GLCK ++
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
A +F+ + K K+ TYN +I+G CK G+V+ ++L
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 88/175 (50%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V + C K +++A L+ + G P + + N L+R L ++ ++ L
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ + P+ +T+ + A VK G + + +L + M KR I P++F Y+ LI G C
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ +A+ +F+ M + + VTYN+LI G+CK V++ L M + + N
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 73/164 (44%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C K +SEA L + P + N L+ L + + + L + G +PD
Sbjct: 161 CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TYG V K GD++ + LL+ M K I +V IY +I LC + + DA LF E
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + + VTYNSLI C G A L M + + N
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%)
Query: 123 SEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
SEA L + G P L + ++ L D + L +++ D + Y
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
+ A +VN + L M +GIRPNV YN LI LC R DA +L +M +RK+
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 243 VGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ VT+++LID + K G++ +A L + M K +++
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A +++ + DG P + + ++LL L + + +K + +F +Q S PD TY ++
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
K G V G +L S++ +G++PNV IY +I G C++ +A+ LF EM + +
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMK 273
++ TYN+LI + G+ + L + M+
Sbjct: 569 NSGTYNTLIRARLRDGDKAASAELIKEMR 597
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 81/159 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++K + E EL+ + + G + N L++ L D ++F ++ G PD
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + K G + K + + E + K + P+++ YN++I G+CK ++ D LF
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + + + Y ++I G+C+ G ++A L MK++
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L + C L A + + + G P + +L+ LL K+ + + L ++
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
++P+ +T+ + ++ + L++ M RG +P++F Y ++ GLCK I
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A L +M K K+ V Y ++ID C V+ A NL M + + N
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L +A +L+ + + P++ N LL ++ +FD VI L +Q+ D +Y
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + + + +L M K G P++ + L+ G C +RI +A L D+M+ +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+TVT+N+LI G + +A L +RM
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 151 LVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPN 210
L+D K D ++LF E+ S P + + K + A K+ + I L E M I +
Sbjct: 56 LLDLK-LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYD 114
Query: 211 VFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRE 270
++ YN+LI C+ ++ A + +M K VT +SL++GYC + +A L +
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 271 RM 272
+M
Sbjct: 175 QM 176
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N ++ SL ++ D + LF E++ G RP+ +TY + G + +LL M
Sbjct: 187 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 246
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
++ I PN+ +N LI KE + +AEKL D+M KR + TYNSLI+G+C +D
Sbjct: 247 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 306
Query: 264 KAFNLRERM 272
KA + E M
Sbjct: 307 KAKQMFEFM 315
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C L +A +++ + FP L + N L++ K+ + ELF E+ G D
Sbjct: 300 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 359
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY +Q GD + ++ + M G+ P++ Y++L+ GLC ++ A ++FD
Sbjct: 360 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 419
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M K ++ Y ++I+G CK G+VD ++L + + V+ N
Sbjct: 420 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 463
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
DL+ S+ KM+ E P++ +L+ LL K+ + L ++ +
Sbjct: 59 DLVISLALLGKMMKLGYE-----------PSIVTLSSLLNGYCHGKRISDAVALVDQMVE 107
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G+RPD +T+ + ++ + L++ M +RG +PN+ Y V++ GLCK I
Sbjct: 108 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 167
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A L ++M K+ V +N++ID CK VD A NL + M+ + + N
Sbjct: 168 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 218
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C K +S+A L + G P + L+ L + + + L + G +P+
Sbjct: 90 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 149
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TYG V K GD++ LL M I +V I+N +I LCK R + DA LF E
Sbjct: 150 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 209
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + + VTY+SLI C G A L M ++ + N
Sbjct: 210 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 253
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+SK + + TEL+ + G + L++ L D ++F ++ G PD
Sbjct: 335 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 394
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
MTY + G + K +E+ + M K I+ +++IY +I G+CK ++ D LF
Sbjct: 395 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 454
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
+ + + + VTYN++I G C + +A+ L ++MK++
Sbjct: 455 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S C S+A++L + P L + N L+ + V +F + +L ++
Sbjct: 225 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 284
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD TY + ++K ++ E M + P++ YN LI G CK +R+ D
Sbjct: 285 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 344
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+LF EM R LVG TVTY +LI G G+ D A + ++M + V
Sbjct: 345 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 390
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++F+ ++ S+C + + + +A L+ + G P + + + L+ L + ++ +L
Sbjct: 185 VIFNTIIDSLC-KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 243
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ + P+ +T+ + A VK G + +L + M KR I P++F YN LI G C
Sbjct: 244 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 303
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
R+ A+++F+ M + TYN+LI G+CK V+ L M
Sbjct: 304 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 350
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 80/149 (53%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A +++ + DG P + + ++LL L + + +K +E+F +Q S + D Y ++
Sbjct: 378 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 437
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
K G V+ G +L S++ +G++PNV YN +I GLC +R + +A L +M + +
Sbjct: 438 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 497
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+ TYN+LI + + G+ + L M+
Sbjct: 498 DSGTYNTLIRAHLRDGDKAASAELIREMR 526
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ F+ L+ + +K SEA L + + G P L + +++ L D L
Sbjct: 115 ITFTTLIHGLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 173
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+++ + D + + + + K V+ + L + M +GIRPNV Y+ LI LC
Sbjct: 174 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 233
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
R DA +L +M ++K+ + VT+N+LID + K G+ +A L + M K +++
Sbjct: 234 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 286
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 73/189 (38%), Gaps = 45/189 (23%)
Query: 129 YHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVK 188
YH RRD F + L + D I LF + S P + K + A K
Sbjct: 3 YHPRRRDCLFVGISWGKDL--------KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAK 54
Query: 189 LG--DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE---------- 236
+ D+ + LL M K G P++ + L+ G C +RI DA L D+
Sbjct: 55 MKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 114
Query: 237 -------------------------MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRER 271
M +R + VTY +++G CK G++D AFNL +
Sbjct: 115 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 174
Query: 272 MKKENVEMN 280
M+ +E +
Sbjct: 175 MEAAKIEAD 183
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+ L + E+K + L+ G P L + N+L++ K+F+K +
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
GF+PD +Y + K G ++ +EL + M++RG+ P+V YN+LI G KE+
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT 237
Query: 230 AEKLFDEMYKRKLVGSTV-TYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
A +L+D + + V V T+N +I G K G VD + ERMK+ E
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE 287
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
PA+ S N LL + V+ KQ+ KV LF + +G P+ TY ++ + K + K
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
L+ M K G +P+VF Y+ +I L K ++ DA +LFDEM +R + YN LIDG+ K
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 259 VGEVDKAFNLRERM 272
+ A L +R+
Sbjct: 232 EKDHKTAMELWDRL 245
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L + C+ K +A + ++G P + S + ++ L + D +ELF E+ +
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK-RGIRPNVFIYNVLIGGLCKERRIG 228
G PD Y + +K D +EL + + + + PNV +N++I GL K R+
Sbjct: 213 RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVD 272
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
D K+++ M + + TY+SLI G C G VDKA
Sbjct: 273 DCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L EA+ + ++G P + S N+L+ L +F + E+ ++G++PD TY
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + ++ +EL + G+ +V ++N+LI GLC ++ DA + M R
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ VTYN+L++G+ KVG+ ++A + M K ++
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI-QDSGFRPDKMTYG 180
L +A EL+ + G P + N+L+ + K +EL+ + +DS P+ T+
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
+ K G V+ +++ E M + +++ Y+ LI GLC + AE +F+E+ +R
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
K VTYN+++ G+C+ G++ ++ L M+ +N
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ K L EA+ L + + G N L+ L+ + + E+ +G RP
Sbjct: 440 CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTV 499
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
++Y + K G + ++ M + G +P++ Y++L+ GLC++R+I A +L+ +
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ L + +N LI G C VG++D A + M+ N N
Sbjct: 560 FLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
+ +V ++L E+ + EAT ++ L+ G + + + L +K + +
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
E++ SG D Y + K + + L++ M+K G+ N + N LIGGL +
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+ R+G+A EM K + V+YN LI G CK G+ +A
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 66/143 (46%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L C + + A EL+H + G + N+L+ L + D + + ++
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
+ +TY ++ K+GD N+ + M K G++P++ YN ++ GLC R + A
Sbjct: 599 NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYA 658
Query: 231 EKLFDEMYKRKLVGSTVTYNSLI 253
+ FD+ + + T+N L+
Sbjct: 659 MEFFDDARNHGIFPTVYTWNILV 681
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V ++L C++ EA+ + +G P L + ++LL L ++ D +EL+
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ SG D M + + +G ++ + ++ +M R N+ YN L+ G K
Sbjct: 559 QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK-- 616
Query: 226 RIGDAEK---LFDEMYKRKLVGSTVTYNSLIDGYC 257
+GD+ + ++ MYK L ++YN+++ G C
Sbjct: 617 -VGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Query: 125 ATELYHLIRRDGK-FPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
A EL+ + D +P + + N+++ L + D ++++ ++ + D TY +
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
G+V+K + + +R +V YN ++GG C+ +I ++ +L+ M + V
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV 357
Query: 244 GSTVTYNSLIDGYCKVGEVDKA 265
+ V+YN LI G + G++D+A
Sbjct: 358 -NIVSYNILIKGLLENGKIDEA 378
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ + +++ ++++ + L + + L+ L D DK +F E+ + D +TY
Sbjct: 271 VDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + G + + +EL M + N+ YN+LI GL + +I +A ++ M +
Sbjct: 331 MLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
TY I G C G V+KA + + ++
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
>AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18694316-18695734 REVERSE
Length = 472
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLV-DFKQFDKVIELFMEIQDS 170
+ ++ E L+ A + Y +R G P + SLN+L+++L + D +++F+E+
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G PD TYG + + G +++ +L M ++ P V Y LI GLC + + +A
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ +EM + + + TY+SL+DG CK G +A L E M
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM 288
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Query: 106 LVFSDLLFSVCCESKMLS---EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
+V D+L S+C + ++ ++H ++ P+ + +L LV+ Q + +
Sbjct: 83 VVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFK 142
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKL-GDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
+ +++ G P + ++A + G V+ G+++ M KRG P+ + Y LI GL
Sbjct: 143 FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGL 202
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
C+ RI +A+KLF EM ++ + VTY SLI+G C VD+A E MK + +E N
Sbjct: 203 CRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPN 261
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S C + EA +L+ + P + + L+ L K D+ + E++ G
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ TY + K G + +EL E M RG RPN+ Y LI GLCKE++I +A
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+L D M + L Y +I G+C + + +A N + M
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+S L+ +C + + L +A EL+ ++ G P + + L+ L ++ + +EL +
Sbjct: 265 YSSLMDGLCKDGRSL-QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNV-------LIGG 220
G +PD YGK + + + L+ M GI PN +N+ ++ G
Sbjct: 324 NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRG 383
Query: 221 LCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
LC A L+ M R + T SL+ CK GE KA L + +
Sbjct: 384 LCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEI 434
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C SK + EA ++ G P + + + L+ L + + +ELF + G RP+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + K + + +ELL+ M +G++P+ +Y +I G C + +A DE
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 237 MYKRKLVGSTVTY-------NSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
M + + +T+ N ++ G C +AF L M+ + +
Sbjct: 358 MILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISV 406
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C SK +S+A L + G P + L+ L + + + L ++ G +PD
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TYG V K GD++ + LL M I+ NV I+N +I LCK R + A LF E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + + VTYNSLI+ C G A L M ++ + N
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N ++ SL ++ + ++LF E++ G RP+ +TY + G + LL +M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
++ I PNV +N LI KE ++ +AEKL +EM +R + T+TYN LI+G+C +D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 264 KA 265
+A
Sbjct: 381 EA 382
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++F+ ++ S+C + + + A +L+ + G P + + N L+ L ++ ++ L
Sbjct: 259 VIFNTIIDSLC-KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ + P+ +T+ + A K G + + +L E M +R I P+ YN+LI G C
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ +A+++F M + + + TYN+LI+G+CK V+ L M + + N
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L + C S+A+ L + P + + N L+ + + + +L E+
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD +TY + +++ ++ + M + PN+ YN LI G CK +R+ D
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+LF EM +R LVG+TVTY ++I G+ + G+ D A
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 79/159 (49%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+LL + C L EA +++ + P + + N L+ K+ + +ELF E+
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G + +TY +Q + GD + + + M + ++ Y++L+ GLC ++
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
A +F + K ++ + YN++I+G CK G+V +A++L
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C LS A + + + G P + +L+ LL K+ + L ++ + G++PD
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
T+ + ++ + L++ M +RG +P++ Y ++ GLCK I A L ++
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M ++ + V +N++ID CK V+ A +L M+ + + N
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 35/194 (18%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ +A +L+ + + FP++ N LL ++ +F+ VI L ++Q G D TY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM---- 237
+ + ++ + +L M K G P++ + L+ G C +RI DA L D+M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 238 YK-------------------------------RKLVGSTVTYNSLIDGYCKVGEVDKAF 266
YK R VTY ++++G CK G++D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 267 NLRERMKKENVEMN 280
NL +M+ ++ N
Sbjct: 244 NLLNKMEAARIKAN 257
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+ ++LL L + + D + +F +Q S + Y ++ K G V + +L S+
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
+ I+P+V YN +I GLC +R + +A+ LF +M + + ++ TYN+LI
Sbjct: 530 S---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 140 ALGSLNMLLRS-LVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
A G +LR+ L D + D ++LF ++ S P + + K + A K+ I L
Sbjct: 46 ASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISL 105
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
E M GI +++ Y++ I C+ ++ A + +M K VT +SL++GYC
Sbjct: 106 GEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 259 VGEVDKAFNLRERM 272
+ A L ++M
Sbjct: 166 SKRISDAVALVDQM 179
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L E L H + + P + + + L+ +L + D LF E+ G P+
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ + + + G+++ E + M +G++P++ +YN L+ G CK + A + D
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M +R L +TY +LIDG+C+ G+V+ A +R+ M + +E++
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 135 DGKFPA-LGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVN 193
D FP + N+L+ ++F EI +P +++ + K+G+++
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 194 KGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
+G L M K RP+VF Y+ LI LCKE ++ A LFDEM KR L+ + V + +LI
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 254 DGYCKVGEVD 263
G+ + GE+D
Sbjct: 353 HGHSRNGEID 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 25/176 (14%)
Query: 120 KMLSEATELYHLI-RRDGKFPALGSLNMLLRSLVDFKQFDK----VIELFMEIQDSGFRP 174
+M +EA L L+ R GK S + + SLV+ + V L + D GF P
Sbjct: 132 EMFTEAQSLIELVVSRKGK----NSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIP 187
Query: 175 DKMTY----------------GKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
D + G + +KL + G NV+++N+L+
Sbjct: 188 DAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILM 247
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
CKE I DA+K+FDE+ KR L + V++N+LI+GYCKVG +D+ F L+ +M+K
Sbjct: 248 NKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 99 ASTPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFD 158
A PL VF+ L+ C E +S+A +++ I + P + S N L+ D
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGN-ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
+ L +++ S RPD TY + A K ++ L + M KRG+ PN I+ LI
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
G + I ++ + +M + L V YN+L++G+CK G++ A N+ + M
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%)
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G RPDK+TY + + GDV +E+ + M + GI + ++ L+ G+CKE R+ DA
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
E+ EM + + VTY ++D +CK G+ F L + M+ +
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%)
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ +G +PD +TY + A K GD G +LL+ M G P+V YNVL+ GLCK
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGY 256
++ +A+ L D M +V +TYN+L++G+
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDG-KFPALGSLNMLLRSLVDFKQFDKVIE 162
L + ++DL F + +A + + L R+ P G N+L R ++ +
Sbjct: 176 LMITYTDLGF--------IPDAIQCFRLSRKHRFDVPIRGCGNLLDR-MMKLNPTGTIWG 226
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+MEI D+GF + + + K G+++ ++ + +TKR ++P V +N LI G C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
K + + +L +M K + TY++LI+ CK ++D A L + M K + N
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
FS L+ +C E +++ L ++R G P + M++ + +L E+
Sbjct: 453 FSALVCGMCKEGRVIDAERALREMLRA-GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
Q G P +TY + KLG + LL++M G+ P+ YN L+ G R
Sbjct: 512 QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG---HHRH 568
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
++ K + + + +V +Y S+++ E+D+A
Sbjct: 569 ANSSKRYIQKPEIGIVADLASYKSIVN------ELDRA 600
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPA-LGSLNMLLRSLVDFKQFDKVIEL 163
+ VF LL ++C ++ + EA++++ +R KFP L LL + + E+
Sbjct: 202 EYVFGCLLDALC-KNGSVKEASKVFEDMRE--KFPPNLRYFTSLLYGWCREGKLMEAKEV 258
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
++++++G PD + + + G + +L+ M KRG PNV Y VLI LC+
Sbjct: 259 LVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
Query: 224 -ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
E+R+ +A ++F EM + VTY +LI G+CK G +DK +++ + M+K+ V
Sbjct: 319 TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
++ L+ ++C K + EA ++ + R G + + L+ + DK + ++
Sbjct: 309 YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM 368
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
+ G P ++TY + + A K + +EL+E M +RG P++ IYNV+I CK +
Sbjct: 369 RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEV 428
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFN 267
+A +L++EM L T+ +I+G+ G + +A N
Sbjct: 429 KEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 146 MLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKR 205
+L+R K +E+ E+ G PD+ +G + A K G V + ++ E M ++
Sbjct: 172 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK 231
Query: 206 GIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
PN+ + L+ G C+E ++ +A+++ +M + L V + +L+ GY G++ A
Sbjct: 232 -FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADA 290
Query: 266 FNLRERMKKENVEMN 280
++L M+K E N
Sbjct: 291 YDLMNDMRKRGFEPN 305
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+V + L C++ L+ A EL + + + G + + N LL L ++ +
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++ PD +T+ + VK G++++ EL + M + + PN YN +I GLC
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
R+ DA+K FD M + + VTYN+LI G+CK VD+ L +RM E
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L C LS A + + + G P++ + LL + L + + S
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G+ P+ + Y + K G++N +ELL M K+G+ +V YN L+ GLC R DA
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ +M KR + VT+ +LID + K G +D+A L + M + +V+ N
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C L +A + + L+ G FP + + N L+ F+ D+ ++LF + GF D
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + ++G + +++ M R + P++ + +L+ GLC I A FD+
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M + + V YN +I G CK +V+KA+ L R+ E V+
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P++ +L LL +F + + L + GF P+ + Y + K D+N +E+
Sbjct: 676 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 735
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M K+GIR + YN LI GL R DA +L +M KRK+ + + + +LID + K
Sbjct: 736 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 795
Query: 259 VGEVDKAFNLRERMKKENVEMN 280
G + +A NL + M + +V N
Sbjct: 796 EGNLLEARNLYKEMIRRSVVPN 817
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ EA L + G P + N ++ L + + +E+F ++ G R D
Sbjct: 689 CQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADA 748
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + G LL M KR I PNV + LI KE + +A L+ E
Sbjct: 749 VTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE 808
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
M +R +V + TYNSLI+G+C G + A
Sbjct: 809 MIRRSVVPNVFTYNSLINGFCIHGCLGDA 837
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+++ L+ A E+++ + + G + N L+ L + ++ L ++ P+
Sbjct: 724 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 783
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ + + VK G++ + L + M +R + PNVF YN LI G C +GDA+ +FD
Sbjct: 784 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 843
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
M + VTYN+LI G+CK V+ L
Sbjct: 844 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 875
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ LL +C + A L +++R P + + L+ V D+ EL+
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN-PDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ S P+ +TY + G + + + M +G PNV YN LI G CK R
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ + KLF M TYN+LI GYC+VG++ A ++
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
L+ E+ P+ TY + G + + + M +G P+V YN LI G C
Sbjct: 805 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 864
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
K +R+ D KLF EM + LVG TYN+LI GYC+ G+++ A + RM
Sbjct: 865 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 914
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 79/162 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C L +A ++ L+ G FP + + N L+ K+ + ++LF E+ G D
Sbjct: 829 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 888
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + + G +N ++ M G+ P++ YN+L+ LC +I A + ++
Sbjct: 889 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 948
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ K ++ +TYN +I G C+ ++ +A+ L + ++ V+
Sbjct: 949 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 990
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
S+ ELY G L S +L+ + + + ++ G+ P +T+G
Sbjct: 93 FSQKMELY------GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS 146
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + + L+ M K G PNV +YN LI GLCK + A +L +EM K+
Sbjct: 147 LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206
Query: 242 LVGSTVTYNSLIDGYCKVGEV-DKAFNLRERMKK 274
L VTYN+L+ G C G D A LR+ MK+
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ F+ L+ + E +L EA LY + R P + + N L+ +F
Sbjct: 784 IFFTALIDTFVKEGNLL-EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 842
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ G PD +TY + K V G++L MT +G+ + F YN LI G C+
Sbjct: 843 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 902
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ A+K+F+ M + VTYN L+D C G+++KA + E ++K ++++
Sbjct: 903 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 957
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
S P+ +V + +V + LYH + G L S +L+ +
Sbjct: 602 SRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSL 661
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
+ L ++ GFRP +T G + + + + L++SM G PNV IYN +I
Sbjct: 662 ALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVIN 721
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
GLCK R + +A ++F M K+ + VTYN+LI G G A L M K ++
Sbjct: 722 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 781
Query: 280 N 280
N
Sbjct: 782 N 782
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ F LL C ++ + +A L L+ + G P + N L+ L + + +EL
Sbjct: 142 VTFGSLLHGFCLVNR-IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLN 200
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E++ G D +TY + G + +L M KR I P+V + LI K+
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG---EVDKAFNL 268
+ +A++L+ EM + + + VTYNS+I+G C G + K F+L
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
+A L+ + P++ LL + + ++++ VI +++ G D ++ +
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
+ ++ + +L M K G P++ + L+ G C RIGDA L M K
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ V YN+LIDG CK GE++ A L M+K+ +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 77/159 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+SK + + +L+ + G + N L+ + + ++F + D G PD
Sbjct: 864 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 923
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + G + K + ++E + K + ++ YN++I GLC+ ++ +A LF
Sbjct: 924 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 983
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ ++ + + Y ++I G C+ G +A L RMK++
Sbjct: 984 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 1022
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L EA ELY + + P + N ++ L + + F + G P+ +TY
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ K V++G++L + M+ G ++F YN LI G C+ ++ A +F M R+
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAF 266
+ +T+ L+ G C GE++ A
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESAL 406
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ L+ A ++++ + G P + + N+LL L + + +K + + ++Q S D
Sbjct: 899 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 958
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY +Q + + + L S+T++G++P+ Y +I GLC++ +A+KL
Sbjct: 959 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRR 1018
Query: 237 MYKRKLVGSTVTYN-SLIDGY 256
M + + S Y+ +L D Y
Sbjct: 1019 MKEDGFMPSERIYDETLRDHY 1039
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
+F+ LF E+ S P + + + + A L I + M GI +++ +
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+LI C+ R+ A + +M K S VT+ SL+ G+C V + AF+L M K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 276 NVEMN 280
E N
Sbjct: 171 GYEPN 175
>AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6328519-6329970 REVERSE
Length = 483
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
Q V++ L+ S CE + +E+ H + FP++ +++ L K+ + +F
Sbjct: 248 QYVYAKLI-SGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIF 306
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++D G+ PD++ Y ++ + G + +L M K+G+RPN F YNV+I G K
Sbjct: 307 KNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKR 366
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
I E ++EM + G+ ++ N++I G+C G+ D+AF + + M + V N
Sbjct: 367 GEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPN 422
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE L A +L+ + + G P + N+++ + V + E+ +G+
Sbjct: 329 CEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTM 388
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
++ ++ G ++ E+ ++M++ G+ PN YN LI G CKE ++ KL+ E
Sbjct: 389 LSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKE 448
Query: 237 MYKRKLVGSTVTYNSLI 253
+ L S + Y +L+
Sbjct: 449 LKALGLKPSGMAYAALV 465
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
L+R+L D + EL + G P + Y K + ++G+ E+L +M
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
P+++IY +I GLC ++ +A +F + + V Y ++I G+C+ G + A
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 267 NLRERMKKENVEMN 280
L M K+ + N
Sbjct: 339 KLWFEMIKKGMRPN 352
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C LS A + + + G P++ +LN LL + + + L ++ + G++PD
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ V + ++ + L+E M +G +P++ Y +I GLCK A L ++
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M K K+ V YN++IDG CK +D AF+L +M+ + ++
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELY-HLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
LVF + L + L EA +LY +++ FP + + N L++ +K+ ++ +E+F
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E+ G + +TY + + D + + + M G+ P++ YN+L+ GLC
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ A +F+ M KR + VTY ++I+ CK G+V+ ++L + + V+ N
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C +SEA L + G P + L+ L + + + L + G +PD
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TYG + K G+ + + LL M K I +V IYN +I GLCK + + DA LF++
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M + + TYN LI C G A L M ++N+
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N ++ L +K D +LF +++ G +PD TY + G + LL M +
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK-LVGSTVTYNSLIDGYCKVGEVD 263
+ I P++ +N LI KE ++ +AEKL+DEM K K V YN+LI G+CK V+
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 264 KAFNLRERMKKENVEMN 280
+ + M + + N
Sbjct: 374 EGMEVFREMSQRGLVGN 390
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%)
Query: 123 SEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
SEA L + G P L + ++ L + D + L +++ D + Y
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
+ K ++ +L M +GI+P+VF YN LI LC R DA +L +M ++ +
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 243 VGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
V +N+LID + K G++ +A L + M K
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 77/149 (51%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A ++ + DG P + + N+LL L + + + +F +Q + D +TY ++
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
A K G V G +L S++ +G++PNV Y ++ G C++ +A+ LF EM + +
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMK 273
++ TYN+LI + G+ + L + M+
Sbjct: 530 NSGTYNTLIRARLRDGDEAASAELIKEMR 558
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L +A L+ + + FP++ + LL ++ +FD VI L ++Q+ G + TY
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + ++ + +L M K G P++ N L+ G C RI +A L D+M +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
TVT+ +L+ G + + +A L ERM
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ K + E E++ + + G + L+ + D +F ++ G PD
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
MTY + G+V + + E M KR ++ ++ Y +I LCK ++ D LF
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + + VTY +++ G+C+ G ++A L MK++
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N+ + L D K D I LF ++ S P + + K + A K+ + I L E M
Sbjct: 45 NLSRKVLQDLK-LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN 103
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
GI N++ Y++ I C+ ++ A + +M K S VT NSL++G+C + +
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 265 AFNLRERM 272
A L ++M
Sbjct: 164 AVALVDQM 171
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C LSEA + L+ R+ P + + L++ K+ D +++F I G +
Sbjct: 334 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 393
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY VQ + G + EL + M G+ P+V Y +L+ GLC ++ A ++F++
Sbjct: 394 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 453
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ K K+ V Y ++I+G CK G+V+ A+NL
Sbjct: 454 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 485
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
Query: 113 FSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGF 172
F CC++ A + + + G P + N L++ L + + + L + ++G
Sbjct: 123 FCRCCKTCF---AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK 232
+PD +TY V + GD + ++LL M +R ++ +VF Y+ +I LC++ I A
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239
Query: 233 LFDEMYKRKLVGSTVTYNSLIDGYCKVGEV-DKAFNLRERMKKENV 277
LF EM + + S VTYNSL+ G CK G+ D A L++ + +E V
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%)
Query: 157 FDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNV 216
D I LF E++ G + +TY V+ K G N G LL+ M R I PNV +NV
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293
Query: 217 LIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
L+ KE ++ +A +L+ EM R + + +TYN+L+DGYC + +A N+ + M
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 349
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+S + A EL+ + G P + + +LL L D + +K +E+F ++Q S
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y ++ K G V L S+ +G++PNV Y V+I GLCK+ + +A L +
Sbjct: 464 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 523
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
M + + TYN+LI + + G++ + L E MK
Sbjct: 524 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 560
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + A L+ + G ++ + N L+R L +++ L ++ P+
Sbjct: 229 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 288
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + VK G + + EL + M RGI PN+ YN L+ G C + R+ +A + D
Sbjct: 289 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 348
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + K VT+ SLI GYC V VD + + K + N
Sbjct: 349 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 392
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L V + L EA ELY + G P + + N L+ + + + +
Sbjct: 292 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 351
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
+ PD +T+ ++ + V+ G+++ +++KRG+ N Y++L+ G C+ +I
Sbjct: 352 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 411
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
AE+LF EM ++ +TY L+DG C G+++KA + E ++K +++
Sbjct: 412 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 461
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 79/159 (49%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+SEA L + +G P + + N ++ + ++L ++++ + D TY
Sbjct: 164 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 223
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + + G ++ I L + M +GI+ +V YN L+ GLCK + D L +M R+
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 283
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+V + +T+N L+D + K G++ +A L + M + N
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 322
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ L+ +C K A L ++ R+ P + + N+LL V + + EL+
Sbjct: 254 VTYNSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANELYK 312
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G P+ +TY + +++ +L+ M + P++ + LI G C +
Sbjct: 313 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 372
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
R+ D K+F + KR LV + VTY+ L+ G+C+ G++ A L + M V
Sbjct: 373 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 424
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C K + + +++ I + G + ++L++ + ELF E+ G PD
Sbjct: 369 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 428
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
MTYG + G + K +E+ E + K + + +Y +I G+CK ++ DA LF
Sbjct: 429 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 488
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + + +TY +I G CK G + +A L +M+++
Sbjct: 489 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 527
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 84/179 (46%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
S PL LV FS +K + + + +G + +LN+++ +
Sbjct: 72 SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCF 131
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
+ ++ G+ PD T+ ++ G V++ + L++ M + G +P+V YN ++
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
G+C+ A L +M +R + TY+++ID C+ G +D A +L + M+ + ++
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 250
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLR-----SLVDFKQFD 158
L+L+ LL + + +L + + RD F ++ + N+ R +VD K+ D
Sbjct: 4 LRLIQPHLLKTGSLRTDLLCTISSFFSSCERD--FSSISNGNVCFRERLRSGIVDIKK-D 60
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
I LF E+ S P + + + A + N ++ + + GI N++ N++I
Sbjct: 61 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 120
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
C+ + A + ++ K T T+N+LI G G+V +A L +RM
Sbjct: 121 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 174
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
LF E+ L EA L+ + G P + + N L+ L + + L ++ G
Sbjct: 198 LFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
D +TYG V K+GD + LL M + I+P+V IY+ +I LCK+ DA+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFN-LRERMKKE 275
LF EM ++ + + TYN +IDG+C G A LR+ +++E
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE L+ A +L+ + G P + N+LL + ++ ++ +ELF IQ S D
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + K V++ +L S+ G+ P+V YNV+I G C + I DA LF +
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
M TYN+LI G K GE+DK+ L M+
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ S+A L+ + G P + + N ++ F ++ L ++ + PD
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + A+VK G + + +L + M R I P+ YN +I G CK R DA+ +FD
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + VT+N++ID YC+ VD+ L + + + N
Sbjct: 427 MASPDV----VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ +A ++ L+ P + + N ++ K+ D+ ++L EI G +
Sbjct: 412 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + ++ ++N +L + M G+ P+ N+L+ G C+ ++ +A +LF+
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ K+ TV YN +I G CK +VD+A++L + VE
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQA----------------A 186
S N+L++ D + + F ++ GF+PD +T+ +
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 187 VKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGST 246
V+ G + + + L + M + G+ P V +N LI GLC E R+ +A L ++M + L
Sbjct: 203 VETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 247 VTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
VTY ++++G CK+G+ A NL +M++ +++
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
L F+ L+ + E K+ EA +L + FP + N ++ +FD +F
Sbjct: 367 LTFNALISASVKEGKLF-EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF- 424
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
D PD +T+ + + V++G++LL +++RG+ N YN LI G C+
Sbjct: 425 ---DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ A+ LF EM + T+T N L+ G+C+ ++++A L E ++ ++++
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ V C +K + E +L I R G + N L+ + + +LF E+ G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD +T + + + + +EL E + I + YN++I G+CK ++ +A
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
LF + + TYN +I G+C + A L +MK E
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 51/109 (46%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
L V +++ C+ + EA +L+ + G P + + N+++ L
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVF 212
F +++D+G PD TY ++ +K G+++K IEL+ M G + F
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 89/171 (52%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L C + +A L +RR+ P + S N ++R + K+ +K +EL E++
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
SG +T+G + A K G +++ + L+ M G+ ++ +Y LI G C +
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ LFDE+ +R +TYN+LI G+CK+G++ +A + E M + V N
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
LV +L C++ + EA ++ G L L+R D + D+ LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E+ + G P +TY ++ KLG + + E+ E M +RG+RPNV+ Y LI GLC
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ +A +L + M ++ + VTYN +I+ CK G V A + E MKK
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L L+ + G P + N L+R Q + E+F + + G RP+
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + +G + ++LL M ++ PN YN++I LCK+ + DA ++ +
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
M KR+ +TYN L+ G C G++D+A L M K++
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE K L +A EL + ++ G +L + +L+ + + D+ + E++ G D
Sbjct: 188 CEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADL 247
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y ++ G++++G L + + +RG P YN LI G CK ++ +A ++F+
Sbjct: 248 VVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEF 307
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M +R + + TY LIDG C VG+ +A L M +++ E N
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKF--PALGSLNMLLRSLVDFKQFDKVIELFMEI 167
++L C L EA++L +L+ +D + P + S N L+ L + + ++++ +
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
+ D++T + + +K GDVNK +EL + ++ I N Y +I G CK +
Sbjct: 451 VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGML 510
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
A+ L +M +L S YN L+ CK G +D+A+ L E M+++N
Sbjct: 511 NVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 1/170 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
++ L+ +C E++ L +A ++Y L+ + N+LL S + +K +EL+ +I
Sbjct: 427 YNALIHGLCKENR-LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
DS + TY + K G +N LL M ++P+VF YN L+ LCKE +
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
A +LF+EM + V++N +IDG K G++ A +L M + +
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
++ L+ +C K EA +L +L+ + P + N+++ L +E+
Sbjct: 319 TYTGLIDGLCGVGKT-KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG--IRPNVFIYNVLIGGLCKE 224
++ RPD +TY + GD+++ +LL M K P+V YN LI GLCKE
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ A ++D + ++ G VT N L++ K G+V+KA L +++ + N
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ ML+ A L +R P++ N LL SL D+ LF E+Q PD
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+++ + ++K GD+ LL M++ G+ P++F Y+ LI K + +A FD+
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M +S++ GE DK L +++ +++ ++
Sbjct: 625 MVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLD 668
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 22/124 (17%)
Query: 150 SLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRP 209
+ ++F ++E +++++ +GF +G +L M KRG
Sbjct: 103 TFINFVSLSGLLECYVQMRKTGF-----AFG-----------------VLALMLKRGFAF 140
Query: 210 NVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLR 269
NV+ +N+L+ GLC+ G A L EM + L+ +YN++I G+C+ E++KA L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 270 ERMK 273
MK
Sbjct: 201 NEMK 204
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S C+ L +A L+ ++RD FP + S N+++ + L + + +G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFI 213
PD TY K + +KLG +++ I + M G P+ I
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
LF E+ L EA L+ + G P + + N L+ L + + L ++ G
Sbjct: 198 LFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
D +TYG V K+GD + LL M + I+P+V IY+ +I LCK+ DA+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFN-LRERMKKE 275
LF EM ++ + + TYN +IDG+C G A LR+ +++E
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE L+ A +L+ + G P + N+LL + ++ ++ +ELF IQ S D
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + K V++ +L S+ G+ P+V YNV+I G C + I DA LF +
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
M TYN+LI G K GE+DK+ L M+
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ S+A L+ + G P + + N ++ F ++ L ++ + PD
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + A+VK G + + +L + M R I P+ YN +I G CK R DA+ +FD
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + VT+N++ID YC+ VD+ L + + + N
Sbjct: 427 MASPDV----VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ +A ++ L+ P + + N ++ K+ D+ ++L EI G +
Sbjct: 412 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + ++ ++N +L + M G+ P+ N+L+ G C+ ++ +A +LF+
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ K+ TV YN +I G CK +VD+A++L + VE
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQA----------------A 186
S N+L++ D + + F ++ GF+PD +T+ +
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 187 VKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGST 246
V+ G + + + L + M + G+ P V +N LI GLC E R+ +A L ++M + L
Sbjct: 203 VETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 247 VTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
VTY ++++G CK+G+ A NL +M++ +++
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
L F+ L+ + E K+ EA +L + FP + N ++ +FD +F
Sbjct: 367 LTFNALISASVKEGKLF-EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF- 424
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
D PD +T+ + + V++G++LL +++RG+ N YN LI G C+
Sbjct: 425 ---DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ A+ LF EM + T+T N L+ G+C+ ++++A L E ++ ++++
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V + + V C +K + E +L I R G + N L+ + + +LF
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G PD +T + + + + +EL E + I + YN++I G+CK
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
++ +A LF + + TYN +I G+C + A L +MK E
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
L V +++ C+ + EA +L+ + G P + + N+++ L
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
F +++D+G PD TY ++ +K G+++K IEL+ M G + F + +C
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC- 653
Query: 224 ERRIGDAEKLFDEMYKRKLVGST 246
R+ D E++ + + K+ G T
Sbjct: 654 --RVSD-EEIIENYLRPKINGET 673
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 1/169 (0%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
FS ++ +C E K L+E ++ + R G P + +L+ + I L
Sbjct: 329 AFSLVIGGLCKEGK-LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+ D GF+PD +TY V K G V + ++ + G+ N Y+ LI GL K R
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ +AE+LF+EM ++ + YN+LID + K +VD+A L +RM++E
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 119 SKMLSEATELYHLIRRDGKF-PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
S M ++ E + G+ P + + N +++ Q K +E +++ G DK+
Sbjct: 234 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 293
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
TY +QA D + L + M ++GI+ ++++IGGLCKE ++ + +F+ M
Sbjct: 294 TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM 353
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
++ + Y LIDGY K G V+ A L RM E
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%)
Query: 157 FDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNV 216
F + L+ E+ + G + + + K G +N+G + E+M ++G +PNV IY V
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 217 LIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
LI G K + DA +L M VTY+ +++G CK G V++A + + +
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 277 VEMN 280
+ +N
Sbjct: 428 LAIN 431
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 103 LLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
++Q ++D F C LY + G + ++++ L + ++
Sbjct: 298 MIQACYADSDFGSC---------VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYT 348
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+F + G +P+ Y + K G V I LL M G +P+V Y+V++ GLC
Sbjct: 349 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 408
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
K R+ +A F L +++ Y+SLIDG K G VD+A L E M ++
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVD----FKQFDKVIELFMEIQDSGF 172
C++ + EA + +H R DG L +M SL+D + D+ LF E+ + G
Sbjct: 408 CKNGRVEEALDYFHTCRFDG----LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKR-GIRPNVFIYNVLIGGLCKERRIGDAE 231
D Y + A K V++ I L + M + G V+ Y +L+ G+ KE R +A
Sbjct: 464 TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEAL 523
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
KL+D M + + + + +L G C G+V +A + + + V
Sbjct: 524 KLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGV 569
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 150 SLVDF----KQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKR 205
SLVD K D++ + EI+ F +++ KLG V + + + M +
Sbjct: 157 SLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKEN 216
Query: 206 GIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
GI P ++ YN L+ GL + AE++F+ M ++ VTYN++I GYCK G+ KA
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 121 MLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG-FRPDKMTY 179
M+ E ++ ++ +G P L + N L+ LV D +F E+ +SG +PD +TY
Sbjct: 202 MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKPDIVTY 260
Query: 180 GKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYK 239
++ K G K +E L M RG + Y +I + G L+ EM +
Sbjct: 261 NTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDE 320
Query: 240 RKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ + ++ +I G CK G++++ + + E M ++ + N
Sbjct: 321 KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPN 361
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Query: 137 KFP-ALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
+FP + + N L++S ++++ ++ +++++G P TY + V V+
Sbjct: 182 EFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA 241
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+ E M I+P++ YN +I G CK + A + +M R +TY ++I
Sbjct: 242 ERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQA 301
Query: 256 YCKVGEVDKAFNLRERMKKENVEM 279
+ L + M ++ +++
Sbjct: 302 CYADSDFGSCVALYQEMDEKGIQV 325
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + EA + + + DG P N L+ + + + +E+F E+ G +PD
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
T+ + ++ ++ + LL M G+ N YN LI + I +A KL +E
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
M + +TYNSLI G C+ GEVDKA +L E+M ++
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++F+ L+ ++ L ++ G P + + N L+ +E+
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++++ G +P+ +Y V KLG +++ +L M+ G++PN +N LI CKE
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
RI +A ++F EM ++ T+NSLI G C+V E+ A L M E V N
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%)
Query: 121 MLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYG 180
++ A E+ H +R G P + S +L+ + D+ + E+ G +P+ + +
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
+ A K + + +E+ M ++G +P+V+ +N LI GLC+ I A L +M
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+V +TVTYN+LI+ + + GE+ +A L M
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P L + +++++ + D + L ++ G P+ + Y + + K VN+ ++L
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
LE M G P+ +N +I GLCK RI +A K+ + M R +TY L++G CK
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 259 VGEVDKAFNLRERMKKENV 277
+G VD A +L R+ K +
Sbjct: 335 IGRVDAAKDLFYRIPKPEI 353
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+ L S C+ + EA E++ + R G P + + N L+ L + + + L ++
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G + +TY + A ++ G++ + +L+ M +G + YN LI GLC+ +
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
A LF++M + S ++ N LI+G C+ G V++A ++ M
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S CE + A L + +G + N L+ + + + + +L E+ G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
D++TY ++ + G+V+K L E M + G P+ N+LI GLC+ + +A
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ EM R VT+NSLI+G C+ G ++ + +++ E +
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P S N++L LV +F ++ P T+G ++A + +++ + L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
L MTK G PN IY LI L K R+ +A +L +EM+ V T+N +I G CK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 259 VGEVDKAFNLRERM 272
+++A + RM
Sbjct: 300 FDRINEAAKMVNRM 313
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
++EA +L + G P + N ++ L F + ++ ++ + GF PD +TYG
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR- 240
+ K+G V+ +L + K P + I+N LI G R+ DA+ + +M
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+V TYNSLI GY K G V A + M+ + + N
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+ N L++ L + DK LF ++ G P ++ + + G V + +E + M
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
RG P++ +N LI GLC+ RI D +F ++ + TVT+N+L+ CK G V
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 263 DKA 265
A
Sbjct: 686 YDA 688
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
+PL ++ ++ L+ +C + + +A L+ + RDG P+ S N+L+ L ++
Sbjct: 559 GSPLDEITYNSLIKGLC-RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
+E E+ G PD +T+ + + G + G+ + + GI P+ +N L+
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
LCK + DA L DE + V + T++ L+
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + A L + + G P L+ SL + ++ ++L E+ G PD
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
T+ + K +N+ +++ M RG P+ Y L+ GLCK R+ A+ LF
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+ K ++ V +N+LI G+ G +D A
Sbjct: 348 IPKPEI----VIFNTLIHGFVTHGRLDDA 372
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L C++ EA + ++R G P L + N L+ L+ + D +ELF ++
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G +P TY + K GD +E E M +GI PN+ N + L K R +A
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+++F + LV +VTYN ++ Y KVGE+D+A L M + E
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A E + ++ G P + + N L SL + + ++F ++D G PD +TY ++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
K+G++++ I+LL M + G P+V + N LI L K R+ +A K+F M + KL
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ VTYN+L+ G K G++ +A L E M ++ N
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+LL E+ M+ A +++ ++ G P + + N LL + + D++ EL+ E+
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIEL-LESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
+ +T+ + VK G+V+ ++L + M+ R P Y LI GL K R+
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+A++LF+ M + YN LI+G+ K GE D A L +RM KE V
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V +L C ++ L A E++ ++ P + LL D + D V + +
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E++ G PD +T+ V A K G+ + + L+ M +GI PN+ YN LI GL +
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ DA +LF M + + TY ID Y K G+ A E+MK + + N
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 117 CESKM--LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRP 174
C SK+ + EA +L + +G P + +N L+ +L + D+ ++FM +++ +P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
+TY + K G + + IEL E M ++G PN +N L LCK + A K+
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+M V TYN++I G K G+V +A +MKK
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 85/165 (51%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L + +S+ +EA E+Y + +G P+L + + L+ L + D V+ L E++ G
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
+P+ T+ ++ + G +N+ E+L+ M G P+V Y VLI LC R++ A+
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
++F++M + VTY +L+D + ++D M+K+
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
+S L EA +L+ + G P N+L+ + D LF + G RPD
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
TY V +G V++G+ + + + G+ P+V YN++I GL K R+ +A LF+EM
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 238 -YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R + TYNSLI G V++A + +++ +E N
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
EA ++++ ++ G P + NM+++ + D+ I+L E+ ++G PD + +
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
K V++ ++ M + ++P V YN L+ GL K +I +A +LF+ M ++
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+T+T+N+L D CK EV A + +M
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEI-QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N+++ LV D ++L+ ++ D F P TYG + K G + + +L E M
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
G RPN IYN+LI G K A LF M K + TY+ L+D C VG VD
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 264 KAFNLRERMKKENV 277
+ + + +K+ +
Sbjct: 979 EGLHYFKELKESGL 992
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Query: 117 CESKMLSEATELYHLIRRD-GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPD 175
C+ +S A L+ +D G P L + N+L+ L++ + ++F++++ +G PD
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 176 KMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKL-F 234
TY + A K G +++ EL + M+ N +N++I GL K + DA L +
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
D M R + TY LIDG K G + +A L E M
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A L+ + ++G P L + ++L+ L + D+ + F E+++SG PD + Y +
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 185 AAVKLGDVNKGIELLESM-TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
K + + + L M T RGI P+++ YN LI L + +A K+++E+ + L
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ T+N+LI GY G+ + A+ + + M
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N L+ L+ + + +E++ + GFRP TY + K D++ + LL+ M
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
G++PNV+ + + I L + +I +A ++ M VTY LID C ++
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 263 DKAFNLRERMK 273
D A + E+MK
Sbjct: 310 DCAKEVFEKMK 320
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 183 VQAAVKLGDVNKGIELLESMTKR-GIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++ + K +V+ L E TK G++P + YN+LIGGL + I A+ +F ++
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ TYN L+D Y K G++D+ F L + M E N
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + + +R L + ++ E+ + D G PD +TY + A ++ E+
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
E M +P+ Y L+ R + ++ + EM K V VT+ L+D CK
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 259 VGEVDKAFNLRERMKKENVEMN 280
G +AF+ + M+ + + N
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPN 397
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 5/159 (3%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ EA L + ++G P L + ++R L + ++ LF I G D+ Y
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + G++N+ +L M +RGI+P++ YN +I GLC R+ +A+++ +
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKG 407
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+VG +TY++L+D Y KV +D +R R + + M+
Sbjct: 408 VVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMD 446
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L +A L + G + N L+ L + + LF +++ G P +
Sbjct: 666 CKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSE 725
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TYG + K G +LL+SM +G+ PN+ IYN ++ G CK + DA ++
Sbjct: 726 VTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSR 785
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
++ T +S+I GYCK G++++A ++ K +N+
Sbjct: 786 KMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P L + L+ +L + D+V +L ++D GF D + Y + K G + +
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M ++G+ +V Y++LI GL KE + +A L +M K + + +TY ++I G CK
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 259 VGEVDKAFNLRERMKKENVEMN 280
+G++++AF L R+ +E++
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVD 346
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 44/194 (22%)
Query: 117 CESKMLSEATELYHLIRRDG---KFPALGSLNMLLRSLVD-FKQFDKVIELFMEIQDSGF 172
C+ A E+Y ++RR G FP+ +L++LVD + D + + + +
Sbjct: 597 CKRGSFEAAIEVYMIMRRKGLTVTFPS-----TILKTLVDNLRSLDAYLLVVNAGETTLS 651
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE-------- 224
D + Y + K G + K + L RG+ N YN LI GLC++
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR 711
Query: 225 -----RRIG----------------------DAEKLFDEMYKRKLVGSTVTYNSLIDGYC 257
IG DAEKL D M + LV + + YNS++DGYC
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 258 KVGEVDKAFNLRER 271
K+G+ + A + R
Sbjct: 772 KLGQTEDAMRVVSR 785
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%)
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ + G D ++Y + K G+V + + LL M K G+ PN+ Y +I GLCK
Sbjct: 267 EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMG 326
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
++ +A LF+ + + Y +LIDG C+ G +++AF++ M++ ++
Sbjct: 327 KLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S ++L+ L ++ + L ++ G P+ +TY ++ K+G + + L +
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRI 338
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
GI + F+Y LI G+C++ + A + +M +R + S +TYN++I+G C G V
Sbjct: 339 LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRV 398
Query: 263 DKA 265
+A
Sbjct: 399 SEA 401
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + +SEA E+ G + + + LL S + + D V+E+ ++ D
Sbjct: 393 CMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDL 447
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ ++A + +G + L +M + + P+ Y +I G CK +I +A ++F+E
Sbjct: 448 VMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE 507
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+ K V + V YN +ID CK G +D A
Sbjct: 508 LRKSS-VSAAVCYNRIIDALCKKGMLDTA 535
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRP--NVFIYNVLIGGLCK- 223
+++ G P +T+ + V+ G+++ IE+LE MT + + + F+ + +I G CK
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 224 ---ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
E +G E D LV + VTY +L+ C++G+VD+ +L R++ E E +
Sbjct: 185 GKPELALGFFESAVD---SGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFD 241
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C L+ A + + + G P++ + N ++ L + + E+ G D
Sbjct: 358 CRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDV 412
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + + +K+ +++ +E+ + I ++ + N+L+ G+A+ L+
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M + L T TY ++I GYCK G++++A + ++K +V
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV 513
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 1/162 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L EA L+ + G P+ + +L+ +L F +L + G P+
Sbjct: 701 CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 760
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y V KLG + ++ + P+ F + +I G CK+ + +A +F E
Sbjct: 761 IIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 820
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFN-LRERMKKENV 277
+ + + LI G+C G +++A LRE + E+V
Sbjct: 821 FKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESV 862
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
VFS L+ ++ M++++ ++ IR G P L + +LL SLV + D V ++F +
Sbjct: 135 VFSWLMIYYA-KAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK--- 223
+ G + Y V A K GD K +LL M ++G+ P++F YN LI CK
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 224 --------------------------------ERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
E R+ +A +LF E+ K + + VTY +
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTT 312
Query: 252 LIDGYCKVGEVDKAFNLRERMK 273
LIDGYC++ ++D+A LRE M+
Sbjct: 313 LIDGYCRMNDIDEALRLREVME 334
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Query: 107 VFSDL-----LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVI 161
VF D+ L SV C+ M EA + + R G P + + N + + +
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
LF EI+D + +TY + ++ D+++ + L E M RG P V YN ++ L
Sbjct: 294 RLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
C++ RI +A +L EM +K+ +T N+LI+ YCK+ ++ A ++++M + ++++
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLD 411
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + EA L ++ G P + + N +LR L + + + L E+ PD
Sbjct: 318 CRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDN 377
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T + A K+ D+ +++ + M + G++ +++ Y LI G CK + +A++
Sbjct: 378 ITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFS 437
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M ++ TY+ L+DG+ + D+ L E +K +
Sbjct: 438 MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 161 IELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGG 220
I +F +I+ G +P + + VK + ++ + M K G+ N+ +YNVL+
Sbjct: 153 IVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHA 212
Query: 221 LCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
K AEKL EM ++ + TYN+LI YCK +A ++++RM++ V N
Sbjct: 213 CSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPN 272
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
ELF I+ GF P TY V ++ +LLE KRG+ +V +Y LI +
Sbjct: 434 ELFSMIE-KGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRI 492
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
CK ++ A+ LF+ M K+ LVG +V + ++ Y + G+V +A L + M + +N
Sbjct: 493 CKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVN 551
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+ L+ C ++ + EL+ +I + G P + + L+ + + D++ +L E
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEK-GFSPGYATYSWLVDGFYNQNKQDEITKLLEEF 473
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
+ G D Y ++ KL V+ L ESM K+G+ + I+ + + ++
Sbjct: 474 EKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKV 533
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
+A LFD MY R+L+ + Y S+ Y +V + F
Sbjct: 534 TEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFF 572
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSG-FRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N+ + L + + +LF ++ S F PD+ TY + GD+NK L + M
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMA 782
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
+GI PN+ YN LI GLCK + A++L ++ ++ + + +TYN+LIDG K G V
Sbjct: 783 LKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVA 842
Query: 264 KAFNLRERM 272
+A L+E+M
Sbjct: 843 EAMRLKEKM 851
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 87/161 (54%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + + EA +L + + P + + N+LL+ F V+ L+ + G D+
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
++ ++A KLGD N+ ++L E++ RG+ + NV+I GLCK ++ +A+++ D
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ + + TY +L GY KVG + +AF ++E M+++ +
Sbjct: 532 VNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%)
Query: 123 SEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
+EA +L+ + G +LN+++ L ++ ++ E+ + +P TY
Sbjct: 488 NEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 547
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
K+G++ + + E M ++GI P + +YN LI G K R + L E+ R L
Sbjct: 548 SHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGL 607
Query: 243 VGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ TY +LI G+C +G +DKA+ M ++ + +N
Sbjct: 608 TPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN 645
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%)
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
+F +++ D+ YG + + G + + + ++M + G+R N I N LI G
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
CK ++ +AE++F M L TYN+L+DGYC+ G VD+A L ++M ++ V
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDS-GFRPDKMTYGKAVQAAVKLGDVNKGIE 197
P + + ++++ + DK + E + S G + +TY + +GDV
Sbjct: 223 PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 282
Query: 198 LLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYC 257
+L M++RG+ NV Y LI G CK+ + +AE +F+ + ++KLV Y L+DGYC
Sbjct: 283 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 342
Query: 258 KVGEVDKAFNLRERMKKENVEMN 280
+ G++ A + + M + V N
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTN 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 5/149 (3%)
Query: 100 STPLLQLVFSDLLFSVC----CESKMLSEATELYH-LIRRDGKFPALGSLNMLLRSLVDF 154
STP LV ++++++V C++ L +A +L+ L+ D P + +L+
Sbjct: 709 STPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIA 768
Query: 155 KQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIY 214
+K L E+ G P+ +TY ++ KLG+V++ LL + ++GI PN Y
Sbjct: 769 GDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITY 828
Query: 215 NVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
N LI GL K + +A +L ++M ++ LV
Sbjct: 829 NTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 72/161 (44%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ ++ EA ++ L++ +L+ Q + + + + G R +
Sbjct: 307 CKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNT 366
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ K G + + ++ M ++P+ YN L+ G C+ + +A KL D+
Sbjct: 367 TICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQ 426
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M ++++V + +TYN L+ GY ++G +L + M K V
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGV 467
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N L+ Q + ++F + D +PD TY V + G V++ ++L + M +
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
+ + P V YN+L+ G + D L+ M KR + ++ ++L++ K+G+ ++
Sbjct: 430 KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNE 489
Query: 265 AFNLRERM 272
A L E +
Sbjct: 490 AMKLWENV 497
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 43/172 (25%)
Query: 150 SLVDFKQFDKVIELFMEIQD-----SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
SL + D+ L +I D G++ K + +K + + +E S K
Sbjct: 655 SLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVE--NSTPK 712
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLF------------------------------ 234
+ + PN +YNV I GLCK ++ DA KLF
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 235 ------DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
DEM + ++ + VTYN+LI G CK+G VD+A L ++ ++ + N
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 824
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+S L EA +++ + P + N L+ D+ ++L ++ P
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV 436
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
MTY ++ ++G + + L + M KRG+ + + L+ L K +A KL++
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+ R L+ T+T N +I G CK+ +V++A
Sbjct: 497 VLARGLLTDTITLNVMISGLCKMEKVNEA 525
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 38/182 (20%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L EA + + R G FP + N L+ ++ +KV +L +E++ G P TYG
Sbjct: 557 LKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGA 616
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD------------ 229
+ +G ++K M ++GI NV I + + L + +I +
Sbjct: 617 LITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFD 676
Query: 230 --------------------------AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
AE + + K+ LV + + YN I G CK G+++
Sbjct: 677 LLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLE 736
Query: 264 KA 265
A
Sbjct: 737 DA 738
>AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18097048-18099027 FORWARD
Length = 659
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 5/153 (3%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
+Y ++RDG P + + N+LL++L + D +L +E+ + G PD ++Y + +
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
++G V +G EL E P V +YN LI GLCKE A +L EM ++ + + +
Sbjct: 228 EVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+Y++LI+ C G+++ AF+ +M K N
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPN 315
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 124 EATELYH-LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
+A +L++ +IR G P + + N L++ K + +F +++ G P+ TYG
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
+ K G ++ + + M G PNV +Y ++ LC+ + +AE L + M K
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 243 VGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
S T+N+ I G C G +D A + +M++++
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + +A ++ + G P + + L+ D + ++ ++ SG P+
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y V+A + + L+E M+K P+V +N I GLC R+ AEK+F +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 237 M-YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + + VTYN L+DG K +++A+ L + VE +
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ S CE ++ E EL P + N L+ L + EL E+ + G
Sbjct: 222 VISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKG 276
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ ++Y + G + L M KRG PN++ + L+ G DA
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 232 KLFDEMYKR-KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
L+++M + L + V YN+L+ G+C G + KA ++ M++
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%)
Query: 158 DKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVL 217
++ +E+F I++ G P Y + + + + M + G PNVF YNVL
Sbjct: 128 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 187
Query: 218 IGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+ LCK ++ A+KL EM + V+Y ++I C+VG V + L ER +
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE 243
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V+++++ ++C SK EA L ++ ++ P++ + N ++ L D + D ++F
Sbjct: 423 VVYTNMVEALCRHSK-FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481
Query: 166 EI-QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++ Q P+ +TY + + K + + L + RG+ + YN L+ G C
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
G A +L +M +T N +I YCK G+ ++A
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 90/168 (53%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+ +FS + K +S +L+ +++DG P + + N+L+ S + D+ I +F E++
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
S +PD ++Y + K GDV++ + M ++G+ P+V Y+ L+ K R+
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEM 565
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
A LF+EM + + VTYN L+D K G +A +L +MK++ +
Sbjct: 566 AYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+ +L S+C K + EA E+ I G N + +L KQ + +LF ++
Sbjct: 410 YMSMLESLCGAGKTI-EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
+ G PD TY + + ++G+V++ I + E + + +P++ YN LI L K +
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+A F EM ++ L VTY++L++ + K V+ A++L E M
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 130 HLIRRDG------KFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
L+R DG ++ G + L+R+L + LF ++ + ++ +Y +
Sbjct: 355 QLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSML 414
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
++ G + IE+L + ++G+ + +YN + L K ++I LF++M K
Sbjct: 415 ESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPS 474
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
TYN LI + +VGEVD+A N+ E +++ +
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEELERSD 507
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
EA L++ + +G + N L++ L K DK I++F + ++G RP++ TY +
Sbjct: 288 EAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL 347
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
V G + + ++E ++KR + IY+ L+ L K + +A +LF +M+ +
Sbjct: 348 NLLVAEGQLVRLDGVVE-ISKRYMTQG--IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVK 404
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
G +Y S+++ C G+ +A + ++ ++ V
Sbjct: 405 GERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGV 438
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
LL++ + + + K +++ EI+ G + D Y + A L K ++ E M KR
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA---LAKDEKACQVFEDMKKRH 265
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
R + + Y ++I + + + +A LF+EM L + V YN+L+ K VDKA
Sbjct: 266 CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 267 NLRERM 272
+ RM
Sbjct: 326 QVFSRM 331
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
S+ S+A ++Y IRR G + + NMLL +L + +K ++F +++ R D+ T
Sbjct: 216 SRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALA---KDEKACQVFEDMKKRHCRRDEYT 272
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
Y ++ ++G ++ + L M G+ NV YN L+ L K + + A ++F M
Sbjct: 273 YTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMV 332
Query: 239 KRKLVGSTVTYNSLID 254
+ + TY+ L++
Sbjct: 333 ETGCRPNEYTYSLLLN 348
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P S ++L+ L+ ++ ELF +++ G D Y + K G VNK +L
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
LE M +G P V Y +I GL K R+ +A LF+E +++ + V Y+SLIDG+ K
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Query: 259 VGEVDKAFNLRERMKKENVEMN 280
VG +D+A+ + E + ++ + N
Sbjct: 670 VGRIDEAYLILEELMQKGLTPN 691
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
EA L R G P++ + N +L L + D+ +++F E++ P+ TY +
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILI 384
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
+ G ++ EL +SM K G+ PNV N+++ LCK +++ +A +F+EM +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+T+ SLIDG KVG VD A+ + E+M + N
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN 481
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P L LN + + + +K +F EI+ F PD +Y + +K G N+ EL
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
SM ++G + YN++I G CK ++ A +L +EM + + VTY S+IDG K
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 259 VGEVDKAFNLRERMKKENVEMN 280
+ +D+A+ L E K + +E+N
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELN 656
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 113 FSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGF 172
FS S M+ L+ ++ G P + L+R + D + L E++ S
Sbjct: 178 FSAVNHSDMM---LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK 232
D + Y + + K+G V+ + + G++P+ Y +IG LCK R+ +A +
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 233 LFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+F+ + K + V T YN++I GY G+ D+A++L ER +
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 5/168 (2%)
Query: 111 LLFSVCCES----KMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
+L++VC +S + A + +H I +G P + ++ L + D+ +E+F
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
++ + P Y + G ++ LLE +G P+V YN ++ L K +
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ +A K+F+EM K+ + TYN LID C+ G++D AF LR+ M+K
Sbjct: 359 VDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 82/162 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ +++A +L ++ G P + + ++ L + D+ LF E + +
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + K+G +++ +LE + ++G+ PN++ +N L+ L K I +A F
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M + K + VTY LI+G CKV + +KAF + M+K+ ++
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ EA + + + G P L + N LL +LV ++ ++ + F +++ P+++TYG
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ K+ NK + M K+G++P+ Y +I GL K I +A LFD
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
V + YN++I+G AF+L E ++ + ++
Sbjct: 793 GVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIH 831
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%)
Query: 123 SEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
+E EL++ ++ G + N+++ + +K +L E++ GF P +TYG
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
+ K+ +++ L E + I NV IY+ LI G K RI +A + +E+ ++ L
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 243 VGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ T+NSL+D K E+++A + MK+
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Query: 144 LNMLL-RSLVD-FKQFDKVIELFM---EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
LN+++ SL+D F + ++ E ++ E+ G P+ T+ + A VK ++N+ +
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVC 714
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
+SM + PN Y +LI GLCK R+ A + EM K+ + ST++Y ++I G K
Sbjct: 715 FQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAK 774
Query: 259 VGEVDKAFNLRERMK 273
G + +A L +R K
Sbjct: 775 AGNIAEAGALFDRFK 789
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%)
Query: 116 CCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPD 175
C ++ L E ++ ++R+ PA + L+ + D ++ LF ++Q+ G+ P
Sbjct: 143 CVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPT 202
Query: 176 KMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD 235
+ ++ K G V+ + LL+ M + ++ +YNV I K ++ A K F
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 236 EMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
E+ L VTY S+I CK +D+A + E ++K
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
+++ ++ + PD + K G+ KG + E + R P+ Y++LI GL
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
K + +LF M ++ V T YN +IDG+CK G+V+KA+ L E MK + E
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L + C + L A EL +++ G FP + ++N+++ L ++ D+ +F E+
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
PD++T+ + K+G V+ ++ E M R N +Y LI R D
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
K++ +M + N+ +D K GE +K + E +K
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 120 KMLSEATELYHLIRRDGKFPALG-SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
K ++ A E + R + P S N LL + + FD + ++ E+ +GF P T
Sbjct: 76 KDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNT 135
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
+ V VK + +G ++++ M K RP Y LIG LF +M
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ + + +LI G+ K G VD A +L + MK +++ +
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + +L+ L ++F+K + E+Q G +P ++Y + K G++ + L
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLID 254
+ G P+ YN +I GL R DA LF+E +R L T L+D
Sbjct: 785 FDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLD 840
>AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6129255-6130775 REVERSE
Length = 506
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Query: 132 IRRDG-KFPALGSLNMLLRSLVDFKQFDKVIELFME-IQDSGFRPDKMTYGKAVQAAVKL 189
++R G +P + + L+ L + + +ELF + I G PD +T+ + +
Sbjct: 222 MKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRA 281
Query: 190 GDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTY 249
G+V + ++L+ M K G PNV+ Y+ L+ G CK +I +A++ FDE+ K L TV Y
Sbjct: 282 GEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGY 341
Query: 250 NSLIDGYCKVGEVDKAFNLRERMK 273
+L++ +C+ GE D+A L MK
Sbjct: 342 TTLMNCFCRNGETDEAMKLLGEMK 365
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 75/161 (46%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + + A ++ ++++G P + + + L+ + + + F E++ +G + D
Sbjct: 279 CRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDT 338
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + + G+ ++ ++LL M R + YNV++ GL E R +A ++ D+
Sbjct: 339 VGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ + +Y +++ C GE++KA M + +
Sbjct: 399 WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 2/145 (1%)
Query: 117 CESKMLSEATELYHLIRRDG-KFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPD 175
C+ + EA + + +++ G K +G L+ + D+ ++L E++ S R D
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVG-YTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 176 KMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD 235
+TY ++ G + +++L+ G+ N Y +++ LC + A K
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 236 EMYKRKLVGSTVTYNSLIDGYCKVG 260
M +R + T+N L+ C+ G
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESG 457
>AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29747102-29748832 REVERSE
Length = 576
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 1/172 (0%)
Query: 109 SDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
+ LL+ +C ++ L +A + L+ G P + L+ L ++L +++
Sbjct: 110 TQLLYDLC-KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKME 168
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
D G+ + +TY V+ LG +N+ ++ +E + ++G+ PN F Y+ L+ KER
Sbjct: 169 DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTD 228
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+A KL DE+ + + V+YN L+ G+CK G D A L + + + N
Sbjct: 229 EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + A +L + G + N L+R L ++ ++ + G P+
Sbjct: 152 CKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNA 211
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY ++AA K ++ ++LL+ + +G PN+ YNVL+ G CKE R DA LF E
Sbjct: 212 FTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE 271
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ + + V+YN L+ C G ++A +L M
Sbjct: 272 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM 307
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%)
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G +P+ + + K + K I ++E M GI P+ Y L+ LCK +G A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+L ++M +TVTYN+L+ G C +G ++++ ER+ ++ + N
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPN 210
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
EA +L I G P L S N+LL + D + LF E+ GF+ + ++Y +
Sbjct: 229 EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYK--RK 241
+ G + LL M P+V YN+LI L R A ++ EM K +
Sbjct: 289 RCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQ 348
Query: 242 LVGSTVTYNSLIDGYCKVGEVD 263
+ +YN +I CK G+VD
Sbjct: 349 FRVTATSYNPVIARLCKEGKVD 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK-RGIRPNVFIYNVLIGG 220
+L E+ GF PD TY ++ G +E+L M + +P V +N +I G
Sbjct: 444 QLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILG 503
Query: 221 LCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
LCK RR A ++F+ M ++K + + TY L++G E++ A
Sbjct: 504 LCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELA 548
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 2/150 (1%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
LV ++L + C+ +A L+ + G + S N+LLR L ++++ L
Sbjct: 245 NLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK--RGIRPNVFIYNVLIGGLC 222
E+ P +TY + + G + +++L+ M+K R YN +I LC
Sbjct: 305 AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLC 364
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSL 252
KE ++ K DEM R+ + TYN++
Sbjct: 365 KEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
>AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26339876-26341789 REVERSE
Length = 637
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 8/176 (4%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE-- 162
+ VF LL ++C + + +A +L+ +R +FP +L L + + K++E
Sbjct: 218 EYVFGCLLDALC-KHGSVKDAAKLFEDMRM--RFPV--NLRYFTSLLYGWCRVGKMMEAK 272
Query: 163 -LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
+ +++ ++GF PD + Y + G + +LL M +RG PN Y VLI L
Sbjct: 273 YVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQAL 332
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
CK R+ +A K+F EM + + VTY +L+ G+CK G++DK + + + M K+ +
Sbjct: 333 CKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
F+ LL+ C KM+ EA + + G P + LL + + +L ++
Sbjct: 255 FTSLLYGWCRVGKMM-EAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDM 313
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
+ GF P+ Y +QA K+ + + +++ M + +V Y L+ G CK +I
Sbjct: 314 RRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKI 373
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ D+M K+ L+ S +TY ++ + K ++ L E+M++
Sbjct: 374 DKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ 420
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+++LL KM ++A +L +RR G P +L+++L + ++ +++F+E+
Sbjct: 290 YTNLLSGYANAGKM-ADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM 348
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
+ D +TY V K G ++K +L+ M K+G+ P+ Y ++ K+
Sbjct: 349 ERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESF 408
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ +L ++M + + YN +I CK+GEV +A L M++ +
Sbjct: 409 EECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGL 458
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
K IE+ E+ GF PD+ +G + A K G V +L E M R N+ + L+
Sbjct: 201 KAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLL 259
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
G C+ ++ +A+ + +M + V Y +L+ GY G++ A++L M++ E
Sbjct: 260 YGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFE 319
Query: 279 MN 280
N
Sbjct: 320 PN 321
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 192 VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
V K IE+L+ M K G P+ +++ L+ LCK + DA KLF++M R V + + S
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTS 257
Query: 252 LIDGYCKVGEVDKA 265
L+ G+C+VG++ +A
Sbjct: 258 LLYGWCRVGKMMEA 271
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 155 KQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIY 214
+ F++ +EL +++ + PD Y ++ A KLG+V + + L M + G+ P V +
Sbjct: 406 ESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTF 465
Query: 215 NVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSL 252
++I GL + + +A F EM R L S Y +L
Sbjct: 466 VIMINGLASQGCLLEASDHFKEMVTRGLF-SVSQYGTL 502
>AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587613-23588220 FORWARD
Length = 152
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%)
Query: 174 PDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKL 233
P +TY + K V+ +L+SM +G P+V ++ LI G CK +R+ + ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 234 FDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
F EM++R +V +TVTY +LI G+C+VG++D A +L M
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%)
Query: 138 FPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIE 197
FP + N ++ + D + + G PD +T+ + K V+ G+E
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 198 LLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYC 257
+ M +RGI N Y LI G C+ + A+ L +EM + +T++ ++ G C
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 258 KVGEVDKAFNLRERMKK 274
E+ KAF + E ++K
Sbjct: 127 SKKELRKAFAILEDLQK 143
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 202 MTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
M + I P YN +I G CK+ R+ DA+++ D M + VT+++LI+GYCK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 262 VDKAFNLRERMKKENVEMN 280
VD + M + + N
Sbjct: 61 VDNGMEIFCEMHRRGIVAN 79
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 59/123 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + +A + + G P + + + L+ K+ D +E+F E+ G +
Sbjct: 21 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 80
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + ++GD++ +LL M G+ P+ ++ ++ GLC ++ + A + ++
Sbjct: 81 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 140
Query: 237 MYK 239
+ K
Sbjct: 141 LQK 143
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 72/132 (54%)
Query: 134 RDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVN 193
+ G P S L+++ K++D +L +++ + G +PD +TYG + V G ++
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 194 KGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
+ + + RG+ P+ IYN+L+ GLCK R A+ LF EM R ++ Y +LI
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 254 DGYCKVGEVDKA 265
DG+ + G+ D+A
Sbjct: 493 DGFIRSGDFDEA 504
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 118 ESKMLSEATELY-HLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
ES LS+A E+Y +++ P + + N LL LV ++ +++ E+ D G D
Sbjct: 146 ESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDN 205
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ V+ G V G +L+E +G PN+ YN +IGG CK I +A +F E
Sbjct: 206 YSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKE 265
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGE 261
+ + + + T+ ++I+G+CK G+
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKEGD 290
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 131 LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG 190
LI R G P NML+ L +F LF E+ D PD Y + ++ G
Sbjct: 441 LIDR-GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG 499
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
D ++ ++ ++G++ +V +N +I G C+ + +A + M + LV TY+
Sbjct: 500 DFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++IDGY K ++ A + M+K + N
Sbjct: 560 TIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
EA +++ L G + N +++ D+ + + + PDK TY +
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
VK D+ I++ M K +PNV Y LI G C + AE+ F EM R LV
Sbjct: 563 DGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLV 622
Query: 244 GSTVTYNSLI 253
+ VTY +LI
Sbjct: 623 PNVVTYTTLI 632
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A + +I D K P + + N+L+ L + + + E G P+ ++Y +Q
Sbjct: 330 AESIGWIIANDCK-PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQ 388
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
A K + + +LL M +RG +P++ Y +LI GL + DA + ++ R +
Sbjct: 389 AYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSP 448
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
YN L+ G CK G A L M N+
Sbjct: 449 DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+VF + + C+ + A ++ ++ G P L + ++ F L
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E+++ G R + A + G E + + +P+V YN+LI LCKE
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ A DE K+ L+ + ++Y LI YCK E D A L +M
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L S C++ A L+ + P L+ + FD+ ++F +
Sbjct: 454 NMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE 513
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G + D + + ++ + G +++ + + M + + P+ F Y+ +I G K++ +
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
A K+F M K K + VTY SLI+G+C G+ F + E KE
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGD----FKMAEETFKE 615
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C S ML EA + + + P + + ++ V + I++F ++ + +P+
Sbjct: 531 CRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNV 590
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR-IGDAEKLFD 235
+TY + GD E + M R + PNV Y LI L KE + A ++
Sbjct: 591 VTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWE 650
Query: 236 EMYKRKLVGSTVTYNSLIDGYCK 258
M K V + VT+N L+ G+ K
Sbjct: 651 LMMTNKCVPNEVTFNCLLQGFVK 673
>AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29068343-29069828 REVERSE
Length = 441
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
E+K + EA L ++ D P + + +L+ +L Q + + LF ++ +SG +PD
Sbjct: 237 EAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC 296
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
Y +Q+ +++ LLE M + G+ PNV YN LI G CK + + A L +M
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKM 355
Query: 238 YKRKLVGSTVTYNSLIDGYCKVG 260
++ LV +TYN+LI G C G
Sbjct: 356 LEQNLVPDLITYNTLIAGQCSSG 378
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C K + A +++ + ++G S L+ L + K+ D+ + L ++++D P+
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV 260
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + A G ++ + L + M++ GI+P+ +Y VLI C + +A L +
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M + L+ + +TYN+LI G+CK V KA L +M ++N+
Sbjct: 321 MLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNL 360
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N LL SL F +++ L+ E+ + PD T+ V KLG V + + + + +
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ 183
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
G P+ F Y I G C+ + + A K+F EM + + V+Y LI G + ++D+
Sbjct: 184 AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDE 243
Query: 265 AFNLRERMKKENVEMN 280
A +L +MK +N N
Sbjct: 244 ALSLLVKMKDDNCCPN 259
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%)
Query: 121 MLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYG 180
++ E LY + D P + + N L+ + + + +G PD TY
Sbjct: 135 LVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYT 194
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
+ + +V+ ++ + MT+ G N Y LI GL + ++I +A L +M
Sbjct: 195 SFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDD 254
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ TY LID C G+ +A NL ++M + ++
Sbjct: 255 NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIK 292
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + EA + + + G P + + K+ D ++F E+ +G ++
Sbjct: 166 CKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNE 225
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
++Y + + + +++ + LL M PNV Y VLI LC + +A LF +
Sbjct: 226 VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ 285
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M + + Y LI +C +D+A L E M
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++F+ +L S+ + M +A + IR DG P L + N L+ V + K E+
Sbjct: 632 VIFNSML-SIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILK 690
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ S +PD ++Y ++ + G + + + +L MT+RGIRP +F YN + G
Sbjct: 691 TLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+ E + + M K + +T+ ++DGYC+ G+ +A + ++K
Sbjct: 751 MFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Query: 102 PLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVI 161
P L+ + LL + C + L+ + + L ++ G P + N +L +D+
Sbjct: 594 PSWMLLRTLLLANFKC--RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAE 651
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
+ I++ G PD +TY + V+ G+ K E+L+++ K ++P++ YN +I G
Sbjct: 652 GILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF 711
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
C+ + +A ++ EM +R + TYN+ + GY +G + ++ E M K + N
Sbjct: 712 CRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPN 770
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ S C +L EA E + ++ G P + N LL+ + + + + E++++
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
D +TY + V A V+ G + ++E MTK+G+ PN Y +I K + +A
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 232 KLFDEMYKRKLVGSTVTYNSLI 253
KLF M + V +T TYN+++
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVL 428
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 1/158 (0%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDF-KQFDKVIELFMEIQDSGFRPDKMTYGKA 182
+A +L+ ++ G P L + N++L + + K++ + E++ G + D+ T
Sbjct: 228 KAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTV 287
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
+ A + G + + E + G P YN L+ K +A + EM +
Sbjct: 288 LSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSC 347
Query: 243 VGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+VTYN L+ Y + G +A + E M K+ V N
Sbjct: 348 PADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Query: 132 IRRDGKFPALGSLNMLLRSLVDFKQFDKVIE-LFMEIQDSGFRPDKMTYGKAVQAAVKLG 190
++ +G P + N +L +L K DK + +F E++ GF PD+ T+ + A + G
Sbjct: 447 MKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
++ MT+ G V YN L+ L ++ E + +M + + +Y+
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENV 277
++ Y K G + R+K+ +
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKEGQI 592
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG-DVNKGIELLESMTKRGIRPNVFIY 214
+++K I+LF +++ G P +TY + K+G K + +L+ M +G++ + F
Sbjct: 225 KYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTC 284
Query: 215 NVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ ++ +E + +A++ F E+ TVTYN+L+ + K G +A ++ + M++
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 275 EN 276
+
Sbjct: 345 NS 346
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%)
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
E+ E+++ G PD ++Y ++ GD+ + M K+G+ P + YN LI GL
Sbjct: 313 EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
E +I AE L E+ ++ +V +VTYN LI+GYC+ G+ KAF L + M + ++
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQ 429
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%)
Query: 134 RDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVN 193
+ G P + N L+ L + + L EI++ G D +TY + + GD
Sbjct: 355 KQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAK 414
Query: 194 KGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
K L + M GI+P F Y LI LC++ + +A++LF+++ + + V N+L+
Sbjct: 415 KAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLM 474
Query: 254 DGYCKVGEVDKAFNLRERM 272
DG+C +G +D+AF+L + M
Sbjct: 475 DGHCAIGNMDRAFSLLKEM 493
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%)
Query: 103 LLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
+L V ++L + C+ +A L+ + DG P + L+ L + + E
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
LF ++ G +PD + + +G++++ LL+ M I P+ YN L+ GLC
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
E + +A +L EM +R + ++YN+LI GY K G+ AF +R+ M
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
Q ++ L++ +C ++K EA EL+ + G P L +N L+ D+ L
Sbjct: 432 QFTYTSLIYVLCRKNKT-READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E+ PD +TY ++ G + EL+ M +RGI+P+ YN LI G K+
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A + DEM + +TYN+L+ G K E + A L MK E + N
Sbjct: 551 GDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 38/206 (18%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF-- 164
+ DLL CC+ +M+ EA E ++L++ G +P + N +L L + + +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 165 ---MEIQDS------------------------------GFRPDKMTYGKAVQAAVKLGD 191
MEI+ + G +P +TY VQ G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 192 VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
+ ++ M +G +P++ YN ++ +C E G A ++ EM + LV +V+YN
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNI 332
Query: 252 LIDGYCKVGEVDKAFNLRERMKKENV 277
LI G G+++ AF R+ M K+ +
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGM 358
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
++L+R + D+ IE F +++ GF P T + +L + M +
Sbjct: 159 DLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYR 218
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
I+ NV+ +N++I LCKE ++ A+ M + + VTYN+L+ G+ G ++
Sbjct: 219 MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEG 278
Query: 265 AFNLRERMKKENVE 278
A + MK + +
Sbjct: 279 ARLIISEMKSKGFQ 292
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 3/173 (1%)
Query: 107 VFSDLLFSVCCESKMLSEATE-LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++ L+ + E+K+ EA E L IR G + N+L+ K L
Sbjct: 364 TYNTLIHGLFMENKI--EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G +P + TY + + + EL E + +G++P++ + N L+ G C
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ A L EM + VTYN L+ G C G+ ++A L MK+ ++
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIK 534
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+ N L+R L +F++ EL E++ G +PD ++Y + K GD + + M
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
G P + YN L+ GL K + AE+L EM +V + ++ S+I+
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+LL C+ + A ++ I G P L + +L V + + E+ D
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G+ PD TY + KLG ++ +++ M K I PN Y V+I LCKE++ G+
Sbjct: 255 RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE 314
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
A +FDEM +R + + +ID C+ +VD+A L +M K N
Sbjct: 315 ARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNN 361
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDS-GFRPDKMTYGKAVQAAVKLGDVNKGIELLES 201
SLN LL L+ ++FD V +F ++S G P+ T V+A K D+ ++L+
Sbjct: 157 SLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDE 216
Query: 202 MTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
+ G+ PN+ Y ++GG + A+++ +EM R TY L+DGYCK+G
Sbjct: 217 IPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGR 276
Query: 262 VDKAFNLRERMKKENVEMN 280
+A + + M+K +E N
Sbjct: 277 FSEAATVMDDMEKNEIEPN 295
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ SEA + + ++ P + +++R+L K+ + +F E+ + F PD
Sbjct: 272 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
K + A + V++ L M K P+ + + LI LCKE R+ +A KLFDE
Sbjct: 332 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE 391
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+++ + S +TYN+LI G C+ GE+ +A L + M + + N
Sbjct: 392 -FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPN 434
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + + N+L+++L + ++ EI G P+ +TY + V GD+
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+LE M RG P+ Y VL+ G CK R +A + D+M K ++ + VTY +I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 256 YCKVGEVDKAFNLRERM 272
CK + +A N+ + M
Sbjct: 306 LCKEKKSGEARNMFDEM 322
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
++ C+ K EA ++ + P ++ +L + + D+ L+ ++ +
Sbjct: 301 VMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN 360
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
PD + K G V + +L + K I P++ YN LI G+C++ + +A
Sbjct: 361 NCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEA 419
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+L+D+MY+RK + TYN LI+G K G V + + E M
Sbjct: 420 GRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 461
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE + EA L+ + ++ P L+ L+ L + + +LF E + G P
Sbjct: 342 CEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSL 400
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + + G++ + L + M +R +PN F YNVLI GL K + + ++ +E
Sbjct: 401 LTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEE 460
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
M + + T+ L +G K+G+ + A +
Sbjct: 461 MLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
>AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G55840.1); Has
18933 Blast hits to 5737 proteins in 174 species: Archae
- 4; Bacteria - 8; Metazoa - 352; Fungi - 335; Plants -
17540; Viruses - 0; Other Eukaryotes - 694 (source: NCBI
BLink). | chr5:16166444-16168276 FORWARD
Length = 610
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ + ++Y ++ R G P + N+L + F +V + ++++ GF PD +TY
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
V + + G + + L + M +R + P++ Y LI GLCK+ R+ +A + F M R
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ ++YN+LI YCK G + ++ L M +V
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV 372
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L +V C E + + +G P L + N L+ S + + L+ +
Sbjct: 240 NILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYR 299
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
PD +TY ++ K G V + + M RGI+P+ YN LI CKE +
Sbjct: 300 RRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQ 359
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
++KL EM +V T +++G+ + G + A N +++ V++
Sbjct: 360 SKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDI 409
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
+ML++ + ++ +F E+ DSGF +T + +KL + ++ M
Sbjct: 169 FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMC 228
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
+ GI PN + +N+L C + + + ++M + VTYN+L+ YC+ G +
Sbjct: 229 RVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLK 288
Query: 264 KAFNLRERMKKENV 277
+AF L + M + V
Sbjct: 289 EAFYLYKIMYRRRV 302
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV + L S C L EA LY ++ R P L + L++ L + + + F
Sbjct: 271 LVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFH 330
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ D G +PD M+Y + A K G + + +LL M + P+ F V++ G +E
Sbjct: 331 RMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREG 390
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
R+ A E+ + K+ + LI C+ G+ A +L +R+ +E
Sbjct: 391 RLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEE 440
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
L+ S+C E K + L +I +G + N L+ SL ++ + L ++++
Sbjct: 417 LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQ 476
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
D TY + ++G + L+ M ++P+ FI L+ G CKE A
Sbjct: 477 NQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKA 536
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVG-EVDKAFNLRERMKK 274
E+L + +YNSL+ C+ G KA L+ERM++
Sbjct: 537 ERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQR 581
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
D L + C L A E + DG P + + N +L +L + D+ +E+F ++ +
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G P+ +Y A GD + + ++ M GI P+ YN +I LC+E + +
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
A +L +M + S VTYN ++ G+CK ++ A N+ E M
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ ++ S+C K L A ++ + + D P + + +L+ + + D+ ++L
Sbjct: 194 VTYNIMIGSLCSRGK-LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMD 252
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G +PD TY ++ K G V++ E++ ++ +G P+V YN+L+ L +
Sbjct: 253 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ + EKL +M+ K + VTY+ LI C+ G++++A NL + MK++ +
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 111 LLFSVCCESKML----SEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
+ +++ E+ ML EA +L + G P + + N ++R + D+ E+
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
++ G PD ++Y ++A + G +G +L+ M PNV Y++LI LC++ +
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
I +A L M ++ L +Y+ LI +C+ G +D A E M
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ +A + ++ + G+ P + + N L+ + D + ++ F PD +TY
Sbjct: 140 IPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + G ++ +++L + +P V Y +LI E + +A KL DEM R
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
L TYN++I G CK G VD+AF + ++ + E
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE 295
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 79/152 (51%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ M+ A E+ + G P + S N+LLR+L++ ++++ +L ++ P+
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + + G + + + LL+ M ++G+ P+ + Y+ LI C+E R+ A + +
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
M + V YN+++ CK G+ D+A +
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%)
Query: 103 LLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
L +V + + + C++ +A E++ + G P S N + +L + +
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+ +E+ +G PD++TY + + G V++ ELL M P+V YN+++ G C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
K RI DA + + M + TY LI+G G +A L
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+V +L + C + EA L L++ G P S + L+ + + D IE
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
+ G PD + Y + K G ++ +E+ + + G PN YN + L
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
A + EM + +TYNS+I C+ G VD+AF L M+
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 36/145 (24%)
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGI-------------------- 207
Q GFR +M K + + G+ + + LLE+M ++G
Sbjct: 83 QSLGFRDTQML--KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNI 140
Query: 208 --------------RPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
+P+VF YN LI G CK RI DA ++ D M + TVTYN +I
Sbjct: 141 PKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 200
Query: 254 DGYCKVGEVDKAFNLRERMKKENVE 278
C G++D A + ++ +N +
Sbjct: 201 GSLCSRGKLDLALKVLNQLLSDNCQ 225
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%)
Query: 141 LGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLE 200
L + N LL +L D ++F E+ + G +PD ++ + A GDV+ ++L+
Sbjct: 243 LLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLD 302
Query: 201 SMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG 260
M + + PNV+ +N +I LCK ++ DA L DEM ++ T TYNS++ +C
Sbjct: 303 RMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHC 362
Query: 261 EVDKAFNLRERMKK 274
EV++A L RM +
Sbjct: 363 EVNRATKLLSRMDR 376
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
++F + + SEA ++ + G P + L+ LL SL D K + E F + +
Sbjct: 143 IVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF 202
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G P TY V+ ++ D + ++ + M +R ++ YN L+ LCK +
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
K+F EM L ++ I YC G+V A+ + +RMK+ ++ N
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPN 312
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
D L C+ K ++ A E + + G P+ + ++L+R + ++F E+ +
Sbjct: 177 DQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLE 236
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
D + Y + A K GDV+ G ++ + M G++P+ + + + I C +
Sbjct: 237 RNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHS 296
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
A K+ D M + LV + T+N +I CK +VD A+ L + M
Sbjct: 297 AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM 339
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ + A ++ ++R P + + N ++++L ++ D L E+ G PD
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + +VN+ +LL M + P+ YN+++ L + R A ++++
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG 408
Query: 237 MYKRKLVGSTVTYNSLIDGYC-KVGEVDKAFNLRERMKKENV 277
M +RK + TY +I G K G++++A E M E +
Sbjct: 409 MSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI 450
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+++ + +A L + + G P + N ++ D + ++ +L + + PD+
Sbjct: 324 CKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDR 383
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER-RIGDAEKLFD 235
TY ++ +++G ++ E+ E M++R P V Y V+I GL +++ ++ +A + F+
Sbjct: 384 HTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFE 443
Query: 236 EMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
M + + T L + G++D L +M++ +
Sbjct: 444 MMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 72/172 (41%)
Query: 103 LLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
++ L+ + L C+S + +++ + G P S + + + D +
Sbjct: 240 VVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYK 299
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+ ++ P+ T+ ++ K V+ LL+ M ++G P+ + YN ++ C
Sbjct: 300 VLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHC 359
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ A KL M + K + TYN ++ ++G D+A + E M +
Sbjct: 360 DHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSE 411
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
L +I+R G P + ++L +L + ++ I F ++ D GF+P+ + + +
Sbjct: 841 LTGMIQR-GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLC 899
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
K G + + E+LE M + G +PNV+ + LI GLCK A +LF ++ + V
Sbjct: 900 KKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNV 959
Query: 248 -TYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
TY S+I GYCK ++++A L RMK++ +
Sbjct: 960 HTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 990
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ A EL +L+ +G P + + N + SL + + EL + G D
Sbjct: 1005 CKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 1064
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY +Q K D+N+ + M K G ++ + N+LI C+++++ ++E+LF
Sbjct: 1065 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 1124
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ L+ + TY S+I YCK G++D A MK+
Sbjct: 1125 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRH 1163
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
L+ + CE+ +++ A + + G P L + L+ L + E+ E+ +
Sbjct: 858 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 917
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGI-RPNVFIYNVLIGGLCKERRIGD 229
G++P+ T+ + K G K L + + +PNV Y +IGG CKE ++
Sbjct: 918 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 977
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
AE LF M ++ L + TY +LI+G+CK G +A+ L M E
Sbjct: 978 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 1023
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 1/165 (0%)
Query: 117 CESKMLSEATELY-HLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPD 175
C+ +A L+ L+R D P + + ++ + ++ LF +++ G P+
Sbjct: 934 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993
Query: 176 KMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD 235
TY + K G + EL+ M G PN++ YN I LCK+ R +A +L +
Sbjct: 994 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053
Query: 236 EMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ + L VTY LI CK ++++A RM K E +
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 1098
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ +++A + + + G + N+L+ + K+ + LF + G P K
Sbjct: 1075 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 1134
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + K GD++ ++ +M + G P+ F Y LI GLCK+ + +A KL++
Sbjct: 1135 ETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEA 1194
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
M R L VT +L YCK + A L E + K+
Sbjct: 1195 MIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 1233
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L+EA + ++ G P+ ++N +L V+ + +F E+ G PD +Y
Sbjct: 764 LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 823
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
V + G + + L M +RG P+ +++ LC+ + A F +M
Sbjct: 824 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 883
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ + + SLIDG CK G + +AF + E M + + N
Sbjct: 884 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 922
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 77/199 (38%), Gaps = 32/199 (16%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+++L + C K + E+ L+ L+ G P + ++ D ++ F +
Sbjct: 1101 LNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM 1160
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRP------------------ 209
+ G PD TYG + K V++ +L E+M RG+ P
Sbjct: 1161 KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDS 1220
Query: 210 ------------NVFIYNV--LIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
++I V L+ LC E+++G A F ++ ++ VT +
Sbjct: 1221 ANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA 1280
Query: 256 YCKVGEVDKAFNLRERMKK 274
+ G+ + +L ER+ +
Sbjct: 1281 CSESGKNNLVTDLTERISR 1299
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 6/169 (3%)
Query: 113 FSVCCESKMLSE------ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
F++ C L+E A +L +R G P + L++ L + + + +
Sbjct: 510 FTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDD 569
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+ GF + A+ +K V++G+EL + G P+V Y+VLI LCK R
Sbjct: 570 VAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACR 629
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+A+ LF+EM + L + TYNS+IDG+CK GE+D+ + RM ++
Sbjct: 630 TMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYED 678
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%)
Query: 127 ELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAA 186
EL+ I +G P + + ++L+++L + + LF E+ G +P TY +
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 187 VKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGST 246
K G++++G+ + M + P+V Y LI GLC R +A ++EM + +
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719
Query: 247 VTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+T+ +LI G CK G +A M+++ +E
Sbjct: 720 ITFMALIQGLCKCGWSGEALVYFREMEEKEME 751
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P N ++R + + +K I +++++ G PD MTY ++++ +L + G L
Sbjct: 817 PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSL 876
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
S+ K G+ ++FI N LI R A KLFDEM + L VT+NS++D Y K
Sbjct: 877 HCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL----VTWNSILDAYAK 932
Query: 259 VGEVDKAFNLRERMKKENV 277
G+V A + + M + +V
Sbjct: 933 SGDVVSARLVFDEMSERDV 951
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE+ +A + + +G + + + L+ + D+ +ELF +I +G PD
Sbjct: 555 CENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDV 614
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y ++A K + L M +G++P V YN +I G CKE I
Sbjct: 615 IAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVR 674
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
MY+ + +TY SLI G C G +A MK ++ N
Sbjct: 675 MYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPN 718
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+L +L+ + + ++ + +F EI G+ D+ V + K G V+K EL+E +
Sbjct: 216 TLTPVLQVYCNTGKSERALSVFNEILSRGWL-DEHISTILVVSFCKWGQVDKAFELIEML 274
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
+R IR N Y VLI G KE RI A +LF++M + + Y+ LI G CK ++
Sbjct: 275 EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDL 334
Query: 263 DKAFNLRERMKKENV 277
+ A +L +K+ +
Sbjct: 335 EMALSLYLEIKRSGI 349
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 101 TPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKV 160
TP+LQ V C + A +++ I G S +L+ S + Q DK
Sbjct: 218 TPVLQ---------VYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKA 267
Query: 161 IELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGG 220
EL +++ R + TY + VK ++K +L E M + G+ ++ +Y+VLIGG
Sbjct: 268 FELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGG 327
Query: 221 LCKERRIGDAEKLFDEM 237
LCK + + A L+ E+
Sbjct: 328 LCKHKDLEMALSLYLEI 344
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ D+L C+ K L A LY I+R G P G L LL S + + ++ E+ +
Sbjct: 318 IALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVII 377
Query: 166 EIQD------------SGFRPDKMTYGKAVQAAVKLGD-----VNKGIELLESMTKRGIR 208
D GF + + + +G+ V++ ++LL+ K I
Sbjct: 378 GDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNK-AIL 436
Query: 209 PNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
P+ +++I L K ++ A L ++ + L+ + YN++I+G CK G +++ L
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 269 RERMKKENVE 278
MK VE
Sbjct: 497 LGEMKDAGVE 506
>AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:566271-569865 FORWARD
Length = 1077
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 87/172 (50%)
Query: 109 SDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
+ L+ ++C ++ A E+ + + + + + ++ SL + L +++
Sbjct: 841 ATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMI 900
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
G P + V A K GD+++ E+L+ M RG++P+V+ Y V+I G K +
Sbjct: 901 SKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMD 960
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+A+++ E K+ S VTY++LI GYCK+ E D+A L M + V+ N
Sbjct: 961 EAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPN 1012
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
FSD++ S+C + L +I + G P N+++ + D+ E+ +
Sbjct: 876 FSDVIHSLCRMRNVKDAKALLLDMISK-GPAPGNAVFNLVVHACSKTGDLDEAKEVLKLM 934
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
+ G +PD TY + K G +++ E+L K+ + + Y+ LI G CK
Sbjct: 935 ESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEY 994
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYC-KVGEVDKAFNLRERMKKENVEMN 280
+A KL +EM + + + YN LI +C K + +KA L E MK++ + +N
Sbjct: 995 DEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLN 1048
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L + C ++EA EL + + G P + N+L + E+ ++ D
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFI-YNVLIGGLCKERRIG 228
G PD +TY + +LG+++ G+ LL+ M RG N I +V++ GLCK RI
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+A LF++M L V Y+ +I G CK+G+ D A L + M
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 86/163 (52%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
++ S C++ + EA L++ ++ DG P L + ++++ L +FD + L+ E+ D
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
P+ T+G + + G + + LL+S+ G ++ +YN++I G K I +A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+LF + + + S T+NSLI GYCK + +A + + +K
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 1/162 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + A + + + G P++ S N+L+ L + +EL ++ G PD
Sbjct: 233 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 292
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + LG ++ E++ M +G+ P+V Y +L+ G C+ I L +
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD 352
Query: 237 MYKRKL-VGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M R + S + + ++ G CK G +D+A +L +MK + +
Sbjct: 353 MLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%)
Query: 131 LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG 190
++ R + ++ +++L L + D+ + LF +++ G PD + Y + KLG
Sbjct: 353 MLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG 412
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
+ + L + M + I PN + L+ GLC++ + +A L D + V YN
Sbjct: 413 KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYN 472
Query: 251 SLIDGYCKVGEVDKAFNL 268
+IDGY K G +++A L
Sbjct: 473 IVIDGYAKSGCIEEALEL 490
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 13/185 (7%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
F+ L++ C +++ ++EA ++ +I+ G P++ S L+ + + + EL E+
Sbjct: 506 FNSLIYGYC-KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 168 QDSGFRPDKMTYG---KAVQAAVKLGDVN---------KGIELLESMTKRGIRPNVFIYN 215
+ G P +TY K + K + N K + L M GI P+ YN
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYN 624
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+I LC+ + + A + M R L S+ TYN LID C G + KA + ++++
Sbjct: 625 TIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQ 684
Query: 276 NVEMN 280
NV ++
Sbjct: 685 NVSLS 689
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 151 LVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPN 210
L F++ DK+ +++ EI+D ++ TY V + + + L + + I P+
Sbjct: 166 LYHFRETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPS 221
Query: 211 VFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRE 270
V +N ++ G CK + A+ F + K LV S ++N LI+G C VG + +A L
Sbjct: 222 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 281
Query: 271 RMKKENVE 278
M K VE
Sbjct: 282 DMNKHGVE 289
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 99 ASTPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFD 158
+S L +V +++ +S + EA EL+ ++ G P++ + N L+ +
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
+ ++ I+ G P ++Y + A G+ EL M GI P Y+V+
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 219 GGLCKERRIGDA-----EKLFD-------EMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
GLC+ + + E++F+ +M + +TYN++I C+V + AF
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Query: 267 NLRERMKKENVE 278
E MK N++
Sbjct: 641 VFLEIMKSRNLD 652
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P++ S N ++ D F + G P ++ + +G + + +EL
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M K G+ P+ YN+L G I A ++ +M + L +TY L+ G C+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 259 VGEVDKAFNLRERMKKENVEMN 280
+G +D L + M E+N
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELN 361
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%)
Query: 157 FDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNV 216
F+K + +++ G PD++TY +Q ++ ++ LE M R + + YN+
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNI 660
Query: 217 LIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
LI LC I A+ + ++ + S Y +LI +C G+ + A L ++
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
V +++ + C K +A E+ + G P L + N +L+ Q E F+E
Sbjct: 196 VTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE 255
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
++ D +TY V G++ + + + M + G+ P+V YN +I LCK+
Sbjct: 256 MKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN 315
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +A +F+EM +R + TYN LI G GE + L +RM+ E E N
Sbjct: 316 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPA-LGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
+ + V C+SK + +A EL+ +R G+F + N++L K+ K +E+ E+
Sbjct: 165 NTILDVLCKSKRVEKAYELFRALR--GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMV 222
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
+ G P+ TY ++ + G + E M KR +V Y ++ G I
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A +FDEM + ++ S TYN++I CK V+ A + E M + E N
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPN 334
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 51/110 (46%)
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+F E+ G P TY +Q K +V + + E M +RG PNV YNVLI GL
Sbjct: 287 VFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 346
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
E+L M + TYN +I Y + EV+KA L E+M
Sbjct: 347 HAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 80/202 (39%), Gaps = 34/202 (16%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
DL + + L H +R P+ + ++ + DK ++LF+ + +
Sbjct: 95 DLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHE 154
Query: 170 SG----------------------------------FRPDKMTYGKAVQAAVKLGDVNKG 195
G F D +TY + + K
Sbjct: 155 HGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKA 214
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+E+L+ M +RGI PN+ YN ++ G + +I A + F EM KR VTY +++ G
Sbjct: 215 LEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHG 274
Query: 256 YCKVGEVDKAFNLRERMKKENV 277
+ GE+ +A N+ + M +E V
Sbjct: 275 FGVAGEIKRARNVFDEMIREGV 296
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 113 FSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGF 172
F V E K A ++ + R+G P++ + N +++ L + + +F E+ G+
Sbjct: 275 FGVAGEIK---RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY 331
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK 232
P+ TY ++ G+ ++G EL++ M G PN YN++I + + A
Sbjct: 332 EPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALG 391
Query: 233 LFDEMYKRKLVGSTVTYNSLIDG 255
LF++M + + TYN LI G
Sbjct: 392 LFEKMGSGDCLPNLDTYNILISG 414
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+ + V C+ + A ++ + R G P + + N+L+R L +F + EL +++
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G P+ TY ++ + +V K + L E M PN+ YN+LI G+ +R D
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 174 PDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKL 233
P T+ + G +K ++L +M + G ++ +N ++ LCK +R+ A +L
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 234 FDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
F + R V TVTYN +++G+C + KA + + M + + N
Sbjct: 184 FRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPN 229
>AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4903012-4904229 FORWARD
Length = 405
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
++ A E+ + G +P+ S N +L LV K FD++ ++F+ G D
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++ + G++ ++LL+ ++ RPNV ++ LI G C + + +A KL + M K +
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ T+T+N LI G K G V++ +L ERMK + E N
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPN 306
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L CES L A +L + P + + + L+R + +F++ +L ++
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
PD +T+ + K G V +GI+LLE M +G PN Y ++ GL ++R +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
A+++ +M + S ++Y ++ G C+ V
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV 358
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
+ ++ IE+ + D G P ++ + V ++ ++ S K G+ + N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+LI GLC+ + A +L DE ++K + +T++ LI G+C G+ ++AF L ERM+KE
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 276 NVE 278
+E
Sbjct: 267 RIE 269
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
LN+L++ L + + ++L E RP+ MT+ ++ G + +LLE M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
K I P+ +N+LI GL K+ R+ + L + M + + TY ++ G +D
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL-----LD 319
Query: 264 KAFNLRER 271
K NL +
Sbjct: 320 KKRNLEAK 327
>AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29071983-29073428 REVERSE
Length = 481
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV + L S C+SK + +A E++ +R D P + ++LL K E+F
Sbjct: 167 LVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPNLPKAREVFR 225
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ D+G PD +TY V K G V++ + ++ SM +P FIY+VL+ E
Sbjct: 226 EMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTEN 285
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ +A F EM + + +NSLI +CK + + + + MK + V N
Sbjct: 286 RLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 340
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
VF+ L+ + C ++M + ++ G P S N++LR L++ + D+ ++F +
Sbjct: 308 VFNSLIGAFCKANRM-KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRK 366
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+ PD TY ++ + ++ ++ + M K+G+ P++ ++VLI GLC+ER
Sbjct: 367 MIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERT 425
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSL 252
A L +EM + + S VT+ L
Sbjct: 426 TQKACVLLEEMIEMGIRPSGVTFGRL 451
>AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675811 FORWARD
Length = 463
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV +L C SK L EA L + G P N +++ + + + ++
Sbjct: 230 LVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYK 289
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++++ G PD++TY + K G V + L++M G P+ Y L+ G+C++
Sbjct: 290 KMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
A L +EM R + TYN+L+ G CK +DK L E MK V++
Sbjct: 350 ESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKF-PALGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
+ L C+ K L E +R D P L S +L+ ++ + K + + L ++
Sbjct: 198 NFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
++GF+PD Y ++ L ++ + + + M + G+ P+ YN LI GL K R+
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+A M T TY SL++G C+ GE A +L E M+ N
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+++ ++ C SK SEA +Y ++ +G P + N L+ L + ++
Sbjct: 266 FLYNTIMKGFCTLSKG-SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ D+G+ PD TY + + G+ + LLE M RG PN YN L+ GLCK R
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKAR 384
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ +L++ M + + Y +L+ K G+V +A+ +
Sbjct: 385 LMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 118 ESKMLSEATELYHLIRRDGKFPA-LGSLNMLLRSLVDFKQFDKVIELFMEIQDS--GFRP 174
+S LS+A L++ I + P L N +L+S + ++LF I S FRP
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 175 DKMTYGKAVQAAVKLGD--VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK 232
+ T+ + A + D ++ +L M G+ P+ ++ + LC+ R+ +A+
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 233 LFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
L E+ ++ T TYN L+ CK ++ + + M+ +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDD 223
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 1/178 (0%)
Query: 103 LLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
+ Q+VF+ L+ C M+ EA+ +Y ++ + G + + N + K++D+ +
Sbjct: 397 ITQVVFNTLIDGYC-RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ 455
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+ + G + ++Y + K G+V + L M+ +G++PN YNV+I C
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
K+ +I +A KL M + + TY SLI G C VD+A L M + ++ N
Sbjct: 516 KQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQN 573
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 80/148 (54%)
Query: 131 LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG 190
++++DG + +L+ V + +LF E+++ G D Y + + G
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
++ + L + +T++G+ P+ + Y LI G+CK +G AE L +EM + + + V +N
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENVE 278
+LIDGYC+ G VD+A + + M+++ +
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + N ++ + V + F V + ++ G +K+TY ++ +VK G ++
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+L + M +RGI +V +Y LI C++ + A LFDE+ ++ L S+ TY +LIDG
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 256 YCKVGEVDKAFNLRERMKKENVEM 279
CKVGE+ A L M+ + V +
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNI 397
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 35/194 (18%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
DL+F V ++ M E ++ + + G S + L + ++ D +E+F + D
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER---- 225
SG + + V+ + G+V K +L++ + +GI+P + YN +I K+R
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 226 -------------------------------RIGDAEKLFDEMYKRKLVGSTVTYNSLID 254
++ DAEKLFDEM +R + Y SLI
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 255 GYCKVGEVDKAFNL 268
C+ G + +AF L
Sbjct: 338 WNCRKGNMKRAFLL 351
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 35/205 (17%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
LL + ++ +S+A +L+ +R G + L+ + LF E+ +
Sbjct: 299 LLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK 358
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G P TYG + K+G++ L+ M +G+ ++N LI G C++ + +A
Sbjct: 359 GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 231 EKLFDEMYKRKLVG-----------------------------------STVTYNSLIDG 255
++D M ++ STV+Y +LID
Sbjct: 419 SMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDV 478
Query: 256 YCKVGEVDKAFNLRERMKKENVEMN 280
YCK G V++A L M + V+ N
Sbjct: 479 YCKEGNVEEAKRLFVEMSSKGVQPN 503
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 63/142 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L V C+ + EA L+ + G P + N+++ + + + +L ++ +G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD TY + +V++ + L M +G+ N Y V+I GL K + +A
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
Query: 232 KLFDEMYKRKLVGSTVTYNSLI 253
L+DEM ++ Y +LI
Sbjct: 595 GLYDEMKRKGYTIDNKVYTALI 616
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 65/136 (47%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
+++ R VD F++ + +F + G D+ + + AA K ++ +E+ M
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
G++ V+ +++ GLC+ + ++KL E + + TYN++I+ Y K +
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 265 AFNLRERMKKENVEMN 280
+ + MKK+ V N
Sbjct: 278 VEGVLKVMKKDGVVYN 293
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 80/156 (51%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE + EA ++ ++ G P L N L++ ++ D V E+ +++ G +PD
Sbjct: 542 CEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDV 601
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+T+ + A +GD+ + E+ M + GI P++ +++L G + AE++ ++
Sbjct: 602 VTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M K + + V Y +I G+C GE+ KA + ++M
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
EA +++ + +G P+L + L+ +L K F ++ L +++ +G +PD + + +
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
A+ + G++++ +++ E M + G +P +N LI G K ++ ++ +L D M + +++
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 456
Query: 244 -GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ T N L+ +C ++++A+N+ +M+ V+
Sbjct: 457 QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVK 492
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 68/129 (52%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
L+ L++ + + +F + + G +P +TY V A + + + L+ + K G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
++P+ ++N +I + + A K+F++M + + T+N+LI GY K+G+++++
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 267 NLRERMKKE 275
L + M ++
Sbjct: 445 RLLDMMLRD 453
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
L+ L + K L + ++G P N ++ + + D+ +++F
Sbjct: 354 LITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFE 413
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK-RGIRPNVFIYNVLIGGLCKE 224
++++SG +P T+ ++ K+G + + LL+ M + ++PN N+L+ C +
Sbjct: 414 KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQ 473
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG 260
R+I +A + +M + VT+N+L Y ++G
Sbjct: 474 RKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/156 (18%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM-EIQ 168
++L C + + EA + + ++ G P + + N L ++ ++ + +
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRML 523
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
+ +P+ T G V + G + + + M + G+ PN+F++N LI G +
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
++ D M + + VT+++L++ + VG++ +
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 82/156 (52%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
++K+ +A L+ ++ G +P + N L + L D+ + E+ DSG +P
Sbjct: 527 KAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
TY + + V+LG ++ ++L E+M K G++PN +Y LI G + + +A + F M
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+ + + + SLI Y KVG +++A + ++MK
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 682
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N+++++ K +K + LF +++ G PD+ TY Q + V++ +L M
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD 578
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
G +P Y +I + + DA L++ M K + + V Y SLI+G+ + G V++
Sbjct: 579 SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEE 638
Query: 265 AFNLRERMKKENVEMN 280
A M++ V+ N
Sbjct: 639 AIQYFRMMEEHGVQSN 654
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
LF + ++ EA + + G P + ++ S V ++L+ ++ +G
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
+P+++ YG + + G V + I+ M + G++ N + LI K + +A
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA---FN-LRER 271
+++D+M + NS++ +G V +A FN LRE+
Sbjct: 676 RVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREK 719
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + N+L+ L F+K L +++ SG+ P +TY + K G IEL
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
L+ M +G+ +V YN+LI LC+ RI L +M KR + + VTYN+LI+G+
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310
Query: 259 VGEVDKAFNLRERM 272
G+V A L M
Sbjct: 311 EGKVLIASQLLNEM 324
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ L EA L + + +DG P + + + L+ +F E+ I G P+
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 473
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + ++G + + I + E+M G + F +NVL+ LCK ++ +AE+
Sbjct: 474 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 533
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
M ++ +TV+++ LI+GY GE KAF++ + M K
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L +V C +++ L + + G P + + N +L +F IEL ++
Sbjct: 197 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 256
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G D TY + + + KG LL M KR I PN YN LI G E ++
Sbjct: 257 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 316
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
A +L +EM L + VT+N+LIDG+ G +A + M+ + +
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
EA ++++++ G P+ S +LL L +FD +M ++ +G ++TY +
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
K G +++ + LL M+K GI P++ Y+ LI G CK R A+++ +Y+ L
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + Y++LI C++G + +A + E M E
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 502
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+++S L+++ CC L EA +Y + +G + N+L+ SL + + E
Sbjct: 474 IIYSTLIYN-CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ G P+ +++ + G+ K + + MTK G P F Y L+ GLCK
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 592
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ +AEK ++ TV YN+L+ CK G + KA +L M + ++
Sbjct: 593 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L + C++ ++EA E + DG P S + L+ + + K +F E+
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G P TYG ++ K G + + + L+S+ + +YN L+ +CK +
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 631
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
A LF EM +R ++ + TY SLI G C+ G+
Sbjct: 632 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
D+L V M+ ++ E++ L+ G P++ + N +L S+V + V E+
Sbjct: 127 DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLK 186
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
PD T+ + G K L++ M K G P + YN ++ CK+ R
Sbjct: 187 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 246
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A +L D M + + TYN LI C+ + K + L M+K + N
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L C S +++ L +R+ P + N L+ + + +L E+
Sbjct: 267 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 326
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G P+ +T+ + + G+ + +++ M +G+ P+ Y VL+ GLCK
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 386
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
A + M + + +TY +IDG CK G +D+A L M K+ ++
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 435
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
++ ++ L+ E K+L A++L + + G P + N L+ + F + +++F
Sbjct: 298 EVTYNTLINGFSNEGKVLI-ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++ G P +++YG + K + + M + G+ Y +I GLCK
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +A L +EM K + VTY++LI+G+CKVG A + R+ + + N
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%)
Query: 120 KMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTY 179
K +S + LY I +G P + + L+ + + + +++ G D+ T+
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 180 GKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYK 239
+ G++N +L++ MT GI + + ++ L + R ++ + EM K
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Query: 240 RKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ + + Y LI+G C+VG++ AF ++E M
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + + N ++ + +K +L E+ + P+ TY + K DV+
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
L S+ GI P+ + L+ G+C+ + K+ R + T+N LI
Sbjct: 774 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833
Query: 256 YCKVGEVDKAFNLRERMKKENVEMN 280
C GE++ AF+L + M + ++
Sbjct: 834 CCANGEINWAFDLVKVMTSLGISLD 858
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 1/163 (0%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
V + L + C+S L++A L+ + + P + L+ L + I E
Sbjct: 614 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673
Query: 167 IQDSG-FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ G P+K+ Y V K G GI E M G P++ N +I G +
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+I L EM + + TYN L+ GY K +V +F L
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
>AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18941118-18942524 FORWARD
Length = 468
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME-IQDS 170
L S ++ ML+ +L+ + G P + S N L+ + + ++ E I +
Sbjct: 89 LISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLA 148
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G P TY + A K G + IEL + + R ++P + YN+LI GLCK RR+G
Sbjct: 149 GLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSV 207
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + E+ K + VTY +++ Y K ++K L +MKKE
Sbjct: 208 DWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
ST LL + + L C+ + L A L R G P + + N L++ F D+
Sbjct: 12 STKLLNISVNSL-----CKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDE 66
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
+ ++++G PD TY + A K +N+ ++L + M G+ P+++ YN L+
Sbjct: 67 AYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMS 126
Query: 220 GLCKERRIGDAEKLFDE-MYKRKLVGSTVTYNSLIDGYCKVGEVDKAF----NLRERMKK 274
K R G+A K+ E ++ LV TYN L+D CK G D A +L+ R+K
Sbjct: 127 CYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKP 186
Query: 275 ENVEMN 280
E + N
Sbjct: 187 ELMTYN 192
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ EA + +R G P + + N L+ ++V++LF E+ SG PD +Y
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 182 AVQAAVKLGDVNKGIELL-ESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
+ KLG + ++L E + G+ P + YN+L+ LCK +A +LF + K
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KS 182
Query: 241 KLVGSTVTYNSLIDGYCK---VGEVDKAFNLRE 270
++ +TYN LI+G CK VG VD + +RE
Sbjct: 183 RVKPELMTYNILINGLCKSRRVGSVD--WMMRE 213
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 131 LIRRDGKFPALGS--LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVK 188
++R KFP + + LN+ + SL F+ ++ L ++ G PD +TY ++ +
Sbjct: 1 MVRGLMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTR 60
Query: 189 LGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVT 248
+++ + M + GI P+V YN LI G K + +LFDEM L +
Sbjct: 61 FIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWS 120
Query: 249 YNSLIDGYCKVGEVDKAFNL 268
YN+L+ Y K+G +AF +
Sbjct: 121 YNTLMSCYFKLGRHGEAFKI 140
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 36/205 (17%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+L+ ++L + C+S+ + + +++ G P + +L+ K+ +K ++LF
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 246
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIE--------------------------- 197
++++ G+ D V A +K G + E
Sbjct: 247 LKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFK 306
Query: 198 ---------LLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVT 248
LLE + +G++P+ + + +++ GL G AEK + + + S VT
Sbjct: 307 DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVT 366
Query: 249 YNSLIDGYCKVGEVDKAFNLRERMK 273
N LIDG CK G VD+A L M+
Sbjct: 367 CNCLIDGLCKAGHVDRAMRLFASME 391
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 124 EATELYH-LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
EA E H L+R + + S N LL D V +L EI+ G +PD T+
Sbjct: 276 EAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
V + +G+ + L + + G++P+V N LI GLCK + A +LF M R
Sbjct: 336 VNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR-- 393
Query: 243 VGSTVTYNSLIDGYCKVGEV 262
TY S++ CK G +
Sbjct: 394 --DEFTYTSVVHNLCKDGRL 411
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L C+S A EL+ ++ K P L + N+L+ L ++ V + E++
Sbjct: 158 NILLDALCKSGHTDNAIELFKHLKSRVK-PELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
SG+ P+ +TY ++ K + KG++L M K G + F ++ L K G
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKT---GR 273
Query: 230 AEKLFDEMYKRKLVGS----TVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
AE+ ++ M++ G+ V+YN+L++ Y K G +D +L E ++ + ++
Sbjct: 274 AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLK 326
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLL----RSLVDFKQFDKVIELFMEI 167
L S S + EA +++ ++ G P L + N ++ + ++FKQ V + F E+
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ---VAKFFDEM 330
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
Q +G +PD++T+ + + G L + MT R I +VF YN L+ +CK ++
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A ++ +M ++++ + V+Y+++IDG+ K G D+A NL M+ + ++
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Query: 105 QLVFS-DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
Q VFS + L C+ + A E+ + P + S + ++ +FD+ + L
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
F E++ G D+++Y + K+G + +++L M GI+ +V YN L+GG K
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ + + +K+F EM + ++ + +TY++LIDGY K G +A +
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+ N LL ++D+V ++F E++ P+ +TY + K G + +E+
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
G+R +V +Y+ LI LCK +G A L DEM K + + VTYNS+ID + + +
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 263 DKA 265
D++
Sbjct: 601 DRS 603
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Query: 106 LVFSDLLFSVCCESKM-LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
LV + + C + M + + + ++R+G P + N LL ++ LF
Sbjct: 303 LVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 362
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E+ + D +Y + A K G ++ E+L M + I PNV Y+ +I G K
Sbjct: 363 DEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKA 422
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
R +A LF EM + V+YN+L+ Y KVG ++A ++ M ++
Sbjct: 423 GRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
++ F+ LL +VC + A L+ + + S N LL ++ Q D E+
Sbjct: 339 RITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++ P+ ++Y + K G ++ + L M GI + YN L+ K
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKV 457
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R +A + EM + VTYN+L+ GY K G+ D+ + MK+E+V N
Sbjct: 458 GRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 63/122 (51%)
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
+ +E F E +D D++ Y A A KLG V + ELL+ M RGI P+V Y LI
Sbjct: 371 EALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLI 430
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
G C + ++ DA L DEM + +TYN L+ G + G ++ + ERMK E +
Sbjct: 431 DGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Query: 279 MN 280
N
Sbjct: 491 PN 492
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 14/175 (8%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + EA L+ + G P L + +++ + + K LF +++ G +PD
Sbjct: 602 CKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDV 661
Query: 177 MTYGKAVQAAVKL-----------GDVNK--GIELLESMTKRGIRPNVFIYNVLIGGLCK 223
+TY + +KL G+V K E+L + GI +V Y VLI CK
Sbjct: 662 VTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCK 721
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL-RERMKKENV 277
+ A +LFD M L V Y +LI Y + G +D A L E KK N+
Sbjct: 722 MNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNI 776
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
V L+ C+ M EA E + R F N+ +L + ++ EL E
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
++D G PD + Y + G V ++L++ M G+ P++ YNVL+ GL +
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYC---KVGEVDKAFNLRERMKKEN 276
+ ++++ M + VT + +I+G C KV E + F+ E+ EN
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPEN 526
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 170 SGFR--PDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
S +R P + GK + A KL +V + L ++M +RG+ P++F Y ++I C+ +
Sbjct: 583 SAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNEL 642
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKV 259
AE LF++M +R + VTY L+D Y K+
Sbjct: 643 QKAESLFEDMKQRGIKPDVVTYTVLLDRYLKL 674
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ EA EL ++ G P + + L+ + ++L E+ +G PD +TY
Sbjct: 404 VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
V + G + +E+ E M G +PN +V+I GLC R++ +AE F + ++
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK- 522
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
S + GYC+ G KA+ R++
Sbjct: 523 ---CPENKASFVKGYCEAGLSKKAYKAFVRLE 551
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 102 PLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVI 161
PL + V+ L FS+C E + + + ++++ + +M + + F + + V
Sbjct: 553 PLRKSVYIKLFFSLCIEGYL----EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVR 608
Query: 162 E---LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
E LF + + G PD TY + +L ++ K L E M +RGI+P+V Y VL+
Sbjct: 609 EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Query: 219 GGLCK-----------ERRIGD--AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
K + +G A ++ E + V Y LID CK+ +++A
Sbjct: 669 DRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQA 728
Query: 266 FNLRERMKKENVE 278
L +RM +E
Sbjct: 729 AELFDRMIDSGLE 741
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + + +L L + + + LF E++ G D TY V + K G + +
Sbjct: 437 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 496
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+ M + G PNV Y LI K +++ A +LF+ M + + VTY++LIDG
Sbjct: 497 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 556
Query: 256 YCKVGEVDKAFNLRERM 272
+CK G+V+KA + ERM
Sbjct: 557 HCKAGQVEKACQIFERM 573
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+S +L +C SKM A L+ ++R G + + +++ S ++ + F E+
Sbjct: 445 YSKVLNYLCNASKM-ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 503
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
++ G P+ +TY + A +K V+ EL E+M G PN+ Y+ LI G CK ++
Sbjct: 504 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 563
Query: 228 GDAEKLFDEMYKRKLV----------------GSTVTYNSLIDGYCKVGEVDKAFNLRER 271
A ++F+ M K V + VTY +L+DG+CK V++A L +
Sbjct: 564 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 623
Query: 272 MKKENVEMN 280
M E E N
Sbjct: 624 MSMEGCEPN 632
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+S + EA +L + +G P + L+ L + D+ E+ E+ + GF
Sbjct: 609 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 668
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + K+ + ++L M + PNV IY +I GLCK + +A KL
Sbjct: 669 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 728
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M ++ + VTY ++IDG+ +G+++ L ERM + V N
Sbjct: 729 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 772
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF------------- 164
++K +S A EL+ + +G P + + + L+ Q +K ++F
Sbjct: 524 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 583
Query: 165 ---MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
+ D+ RP+ +TYG + K V + +LL++M+ G PN +Y+ LI GL
Sbjct: 584 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 643
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
CK ++ +A+++ EM + + TY+SLID Y KV D A + +M + + N
Sbjct: 644 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 702
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPA-LGSLNMLLRSLVDFKQFDKVIEL 163
Q+V+ D L C+ L EA E+ + G FPA L + + L+ K+ D ++
Sbjct: 633 QIVY-DALIDGLCKVGKLDEAQEVKTEMSEHG-FPATLYTYSSLIDRYFKVKRQDLASKV 690
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
++ ++ P+ + Y + + K+G ++ +L++ M ++G +PNV Y +I G
Sbjct: 691 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 750
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
+I +L + M + + + VTY LID CK G +D A NL E MK+ +
Sbjct: 751 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 803
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 6/172 (3%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
VF L S CE+ + EA + + +R P + + + LL ++ KQ + +
Sbjct: 262 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 321
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+ G P + V A GD + +LL+ M K G P +YN+LIG +C ++
Sbjct: 322 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 381
Query: 227 ------IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ AEK + EM +V + + +S C G+ +KAF++ M
Sbjct: 382 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREM 433
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
++ L + D+ +L +++ G +P+ +TY + +G + +ELLE M +G
Sbjct: 709 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 768
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
+ PN Y VLI CK + A L +EM + T Y +I+G+ K
Sbjct: 769 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 820
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%)
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
++ F PD + Y K + + + ++ L M PNV Y+ L+ G +++
Sbjct: 252 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ 311
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+G +++ + M S +NSL+ YC G+ A+ L ++M K
Sbjct: 312 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 359
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 36/207 (17%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+++++++ +C K EA +L ++ G P + + ++ + + +EL
Sbjct: 704 VIYTEMIDGLCKVGKT-DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 762
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKR-------GIR---------- 208
+ G P+ +TY + K G ++ LLE M + G R
Sbjct: 763 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF 822
Query: 209 ----------------PNVFIYNVLIGGLCKERRIGDAEKLFDEM--YKRKLVGSTVTYN 250
P + +Y +LI L K +R+ A +L +E+ + LV + TYN
Sbjct: 823 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYN 882
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENV 277
SLI+ C +V+ AF L M K+ V
Sbjct: 883 SLIESLCLANKVETAFQLFSEMTKKGV 909
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 3/147 (2%)
Query: 127 ELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAA 186
E IR D K LN+L+R F +E ++D FRP + TY +QA
Sbjct: 145 EFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAF 204
Query: 187 VKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGST 246
+K ++ + M+ +R + F LCK + +A L + V T
Sbjct: 205 LKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDT 261
Query: 247 VTYNSLIDGYCKVGEVDKAFNLRERMK 273
V Y LI G C+ ++A + RM+
Sbjct: 262 VFYTKLISGLCEASLFEEAMDFLNRMR 288
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + S N L K D+V ++M + P+ +TY + K G++ ++
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
SM + + PNV + LI G CK + A L+ EM + ++ + VTY +LIDG+CK
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 259 VGEVDKAFNLRERMKKENVEMN 280
GE+ +A + RM ++ VE N
Sbjct: 246 KGEMQRAEEMYSRMVEDRVEPN 267
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
L + ++ S C + L EATE+ + + P + ++ + + + +
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGI-RPNVFIYNVLIGGLC 222
+ ++ + GF PD + + K G +L E++ I + N +Y VLI LC
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNG------QLHEAIVYFCIEKANDVMYTVLIDALC 414
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
KE + E+LF ++ + LV Y S I G CK G + AF L+ RM +E + ++
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 76/162 (46%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ L A LY +RR + + L+ + + E++ + + P+
Sbjct: 209 CKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNS 268
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + + GD + ++ L M +G+R ++ Y V+I GLC ++ +A ++ ++
Sbjct: 269 LVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED 328
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M K LV V + ++++ Y K G + A N+ ++ + E
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 116 CCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPD 175
CC +++ +T + F G L + L+S F ++ P+
Sbjct: 158 CCSPNVVTYSTWI-------DTFCKSGELQLALKS-------------FHSMKRDALSPN 197
Query: 176 KMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD 235
+T+ + K GD+ + L + M + + NV Y LI G CK+ + AE+++
Sbjct: 198 VVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257
Query: 236 EMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + ++ +++ Y ++IDG+ + G+ D A +M + + ++
Sbjct: 258 RMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+S L A + +H ++RD P + + L+ + + L+ E++ +
Sbjct: 174 CKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNV 233
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + K G++ + E+ M + + PN +Y +I G + +A K +
Sbjct: 234 VTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAK 293
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M + + Y +I G C G++ +A + E M+K ++
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL 334
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 73/190 (38%), Gaps = 38/190 (20%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
L +L+ R G P S N ++ + Q ++ + G PD ++Y +
Sbjct: 44 LAYLVSR-GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC 102
Query: 188 KLGDVNKGIELLESMTK-------------------------------------RGIRPN 210
+ GD+ +LES+ + PN
Sbjct: 103 RNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPN 162
Query: 211 VFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRE 270
V Y+ I CK + A K F M + L + VT+ LIDGYCK G+++ A +L +
Sbjct: 163 VVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYK 222
Query: 271 RMKKENVEMN 280
M++ + +N
Sbjct: 223 EMRRVRMSLN 232
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 5/160 (3%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
+S + A +YH + G P + +L+ ++ + Q + I F I+ + + +
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC-IE----KANDV 404
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
Y + A K GD + L +++ G+ P+ F+Y I GLCK+ + DA KL M
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ L+ + Y +LI G G + +A + + M +
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI 504
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 64/150 (42%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + A E+Y + D P ++ D ++ ++ + G R D
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDI 303
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
YG + G + + E++E M K + P++ I+ ++ K R+ A ++ +
Sbjct: 304 TAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
+ +R V +++IDG K G++ +A
Sbjct: 364 LIERGFEPDVVALSTMIDGIAKNGQLHEAI 393
>AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29920334-29922676 REVERSE
Length = 780
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 35/192 (18%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + EA EL L +DG L + L+ L +++ + EL+ + +PD
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN--------------------- 215
+ Y +Q K G + ++LL SM +GI P+ + YN
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 216 --------------VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
+LI +C+ + +AE++F E+ K S T+N+LIDG CK GE
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 262 VDKAFNLRERMK 273
+ +A L +M+
Sbjct: 459 LKEARLLLHKME 470
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKV-IELFMEIQD 169
+L S + M +A E + ++ P + + N++LR ++ + F + ++ E+
Sbjct: 132 VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLK 191
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
P+ T+G + K G + ++ + MT RGI PN Y +LI GLC+ D
Sbjct: 192 CNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADD 251
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
A KLF EM +V +N+L+DG+CK+G + +AF L +K+
Sbjct: 252 ARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L S C+ +A +L++ ++ G +P + N LL + + EL +
Sbjct: 238 ILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKD 297
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
GF Y + + + EL +M K+ I+P++ +Y +LI GL K +I DA
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
KL M + + T YN++I C G +++ +L+ M +
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSE 401
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLL------------RSLVDFKQFD 158
+L C + ++ EA E++ I + G P++ + N L+ R L+ +
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG 472
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
+ LF+ + SG R + V+ G + K L G P++ YNVLI
Sbjct: 473 RPASLFLRLSHSGNR--------SFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLI 524
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
G C+ I A KL + + + L +VTYN+LI+G +VG ++AF L
Sbjct: 525 NGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%)
Query: 123 SEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
S+A +++ + G P + +L+ L D +LF E+Q SG PD + +
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
+ KLG + + ELL K G + Y+ LI GL + RR A +L+ M K+ +
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 243 VGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ Y LI G K G+++ A L M + +
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P L + +L+ L + ++F ++ G P+++TY + + G + +L
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKL 255
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M G P+ +N L+ G CK R+ +A +L K V Y+SLIDG +
Sbjct: 256 FYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 259 VGEVDKAFNLRERMKKENVE 278
+AF L M K+N++
Sbjct: 316 ARRYTQAFELYANMLKKNIK 335
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C +L EA ++ +++ G FP + N L+ K+ D +++ + G D
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY Q + G + ++L M G+ P+++ +N+L+ GLC +IG A ++
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ K K V +TYN +I G CK +V+ A+ L
Sbjct: 420 LQKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 82/174 (47%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+V + + CE ++ A ++ +++ G P + + N L+ L + +
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++ G PD +T+ + K G + + + M +R + PN+ YN LI GLC
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ +A+K+ + + + + VTYN+LI+GYCK VD + M ++ V+
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C EA L I G P + N ++ SL + Q + +++ ++ G RPD
Sbjct: 160 CHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDV 219
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + G +L M + GI P+V ++ LI KE ++ +A+K ++E
Sbjct: 220 VTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNE 279
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
M +R + + VTYNSLI+G C G +D+A
Sbjct: 280 MIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C LS A + + G P++ + L+ +F + + L +I G+ P+
Sbjct: 125 CRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNV 184
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + + + G VN +++L+ M K GIRP+V YN LI L G + ++ +
Sbjct: 185 VIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSD 244
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + +T+++LID Y K G++ +A M + +V N
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ E ++L + +I+R P + + N L+ L D+ ++
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN-PNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ GF P+ +TY + K V+ G+++L M++ G+ + F YN L G C+
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ AEK+ M + T+N L+DG C G++ KA E ++K
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKS 423
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 74/160 (46%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
S ++A L+ + P++ + LL ++ +++ VI LF ++ G D
Sbjct: 56 HSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLY 115
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
++ + + ++ + L M K G P++ + L+ G C R +A L D++
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ V YN++ID C+ G+V+ A ++ + MKK +
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++K + + ++ ++ RDG + N L + +F ++ + G PD
Sbjct: 335 CKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDM 394
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
T+ + G + K + LE + K + YN++I GLCK ++ DA LF
Sbjct: 395 YTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCS 454
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
+ + + +TY +++ G + +A L +M+KE+
Sbjct: 455 LALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%)
Query: 148 LRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGI 207
LRS + +F+ + LF ++ +S P + + + + A KL I L + GI
Sbjct: 51 LRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGI 110
Query: 208 RPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFN 267
+++ + LI C+ R+ A +M K S VT+ SL++G+C V +A +
Sbjct: 111 SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Query: 268 LRERMKKENVEMN 280
L +++ E N
Sbjct: 171 LVDQIVGLGYEPN 183
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
++ L++ EL +R G P + + N+L+ S+V D+ E+ E+ GF P +
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL 549
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
+ + K GD + L M ++P+V + L+ G CK +R+ A LF+++
Sbjct: 550 AFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL 609
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
L V YN+LI GYC VG+++KA L
Sbjct: 610 LDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
L S +L C +S+A ++ ++ +G + + N L+ Q +KV EL
Sbjct: 442 SLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI 501
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E++ +G PD TY + + V G +++ E++ + +RG P+ + +IGG K
Sbjct: 502 DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKR 561
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+A L+ M ++ VT ++L+ GYCK ++KA L ++
Sbjct: 562 GDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL 609
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C +A + + + + G P+L + +L+ + F +F ++ G + D
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + K +NK EL++ M GI P+V YN+LI + I +A ++ E
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ +R V ST+ + +I G+ K G+ +AF L M
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 3/161 (1%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ EA +L H R P + + L ++ + +F EI + G PD
Sbjct: 352 CKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + LG +K + ++ K G P++ +LIG + I DAE +F
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M L VTYN+L+ GY K +++K F L + M+ +
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI 509
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
Query: 103 LLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
+L+ VFS +L C + ++ A +L + + + G FP+ G LL+ ++ + E
Sbjct: 199 VLETVFS-ILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELARE 257
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+ G + ++ G +KG ELL M GIRP++ + V I LC
Sbjct: 258 FVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLC 317
Query: 223 KERRIGDAEKLFDEMYKRKLVGST---VTYNSLIDGYCKVGEVDKAFNL 268
K + +A + ++K KL G + V+ +S+IDG+CKVG+ ++A L
Sbjct: 318 KAGFLKEATSV---LFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 1/160 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
V+S L ++C ML A+ ++ I G P ++ + + DK + F
Sbjct: 374 FVYSSFLSNICSTGDML-RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ SG P T + A + G ++ + +M G++ +V YN L+ G K
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
++ +L DEM + TYN LI G +D+A
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + + LL ++ +K I LF ++ D+G +PD + Y + +GD+ K EL
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGD---AEKLFDEMYKRK 241
+ M +RG+ PN ++ L+ GL +R + A L +E+ K
Sbjct: 641 IGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAK 686
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ EA E+ + R G P+ + ++ F + L+ + D +PD +T
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ K + K I L + G++P+V +YN LI G C I A +L M +R
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 242 LVGSTVTYNSLIDG 255
++ + T+++L+ G
Sbjct: 649 MLPNESTHHALVLG 662
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
+ P +V++ ++ +C M++ + +++R G P + + N L+ +L +FD+
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR-GVNPDVFTYNTLISALCKEGKFDE 353
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG------------------------ 195
+L +Q+ G PD+++Y +Q GDVN+
Sbjct: 354 ACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVID 413
Query: 196 -----------IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
+ +L M G++PNV+ N LI G K R+ DA + +EM K+
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP 473
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
T TYN L+ C +G + AF L + M + +
Sbjct: 474 DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ 507
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 104/270 (38%), Gaps = 58/270 (21%)
Query: 49 SKDYERCEQVNK--LKDLLEQGCTDAAYXXXXXXXXXXXXXXXXXXXXXXXXASTPLLQL 106
S DY+ C ++ ++DL QG DAA S + L
Sbjct: 114 SFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIY-----------------SGVIPGL 156
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
+ + L + C++ + +A L +R G P S N L++ L DK + LF
Sbjct: 157 ITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNT 216
Query: 167 IQDSGFRPDKMTYGKAVQA---------------------------------------AV 187
+ G RP+++T V A
Sbjct: 217 MNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCF 276
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
K G+V + +E+ + M+++ + + +YNV+I GLC + A +M KR +
Sbjct: 277 KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVF 336
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
TYN+LI CK G+ D+A +L M+ V
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
+ +E++ E+ D + Y ++ G++ + M KRG+ P+VF YN LI
Sbjct: 283 QALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLI 342
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
LCKE + +A L M + ++Y +I G C G+V++A
Sbjct: 343 SALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
Query: 99 ASTPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSL-NMLLRSLVDFKQF 157
A+ PL +V +L C ++ + +A E++ + + PA + N+++R L
Sbjct: 259 ANAPL-DIVICTILMDSCFKNGNVVQALEVWKEMSQK-NVPADSVVYNVIIRGLCSSGNM 316
Query: 158 DKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVL 217
++ G PD TY + A K G ++ +L +M G+ P+ Y V+
Sbjct: 317 VAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVI 376
Query: 218 IGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
I GLC + A + M K L+ + +N +IDGY + G+ A ++ M V
Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV 436
Query: 278 EMN 280
+ N
Sbjct: 437 KPN 439
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%)
Query: 190 GDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTY 249
G ++ + L + M G+ P + +N L+ GLCK I A+ L EM + + V+Y
Sbjct: 135 GKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSY 194
Query: 250 NSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
N+LI G C V VDKA L M K + N
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPN 225
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%)
Query: 123 SEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
S A + +L+ G P + + N L+ V + + E++ + PD TY
Sbjct: 422 SSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLL 481
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
+ AA LG + +L + M +RG +P++ Y L+ GLC + R+ AE L + +
Sbjct: 482 LGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Query: 243 VGSTVTYNSLIDGYCKVGEVDKAF 266
V + L Y ++ +A+
Sbjct: 542 TIDHVPFLILAKKYTRLQRPGEAY 565
>AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2399117-2400496 REVERSE
Length = 459
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 87/167 (52%), Gaps = 1/167 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ L+ +C M + L +I++ + P + +L++ L ++++ +L
Sbjct: 222 VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIR-PNAVTFGLLMKGLCCKGEYNEAKKLMF 280
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+++ G +P + YG + K G +++ LL M KR I+P+V IYN+L+ LC E
Sbjct: 281 DMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTEC 340
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
R+ +A ++ EM + + TY +IDG+C++ + D N+ M
Sbjct: 341 RVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAM 387
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ +A +++H I + SLN L+ LVD + +K F +D RP+ +++
Sbjct: 132 VDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNI 191
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++ + D ++ + M + ++P+V YN LIG LC+ +G A+ L ++M K++
Sbjct: 192 LIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKR 251
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKA 265
+ + VT+ L+ G C GE ++A
Sbjct: 252 IRPNAVTFGLLMKGLCCKGEYNEA 275
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P S N+L++ +D ++ ++F E+ + +P +TY + + D+ K L
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
LE M K+ IRPN + +L+ GLC + +A+KL +M R V Y L+ K
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 259 VGEVDKAFNLRERMKKENVE 278
G +D+A L MKK ++
Sbjct: 304 RGRIDEAKLLLGEMKKRRIK 323
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P++ + N L+ L K L ++ RP+ +T+G ++ G+ N+ +L
Sbjct: 219 PSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKL 278
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
+ M RG +P + Y +L+ L K RI +A+ L EM KR++ V YN L++ C
Sbjct: 279 MFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCT 338
Query: 259 VGEVDKAFNLRERMKKENVEMN 280
V +A+ + M+ + + N
Sbjct: 339 ECRVPEAYRVLTEMQMKGCKPN 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ F L+ +CC+ + +EA +L + G P L + +L+ L + D+ L
Sbjct: 257 VTFGLLMKGLCCKGE-YNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLG 315
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E++ +PD + Y V V + +L M +G +PN Y ++I G C+
Sbjct: 316 EMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIE 375
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ + M + + T+ ++ G K G +D A + E M K+N+
Sbjct: 376 DFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 158 DKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVL 217
DK I++F +I + + V G++ K + +RPN +N+L
Sbjct: 133 DKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNIL 192
Query: 218 IGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
I G + A K+FDEM + ++ S VTYNSLI C+ ++ KA +L E M K+ +
Sbjct: 193 IKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRI 252
Query: 278 EMN 280
N
Sbjct: 253 RPN 255
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46100.1). | chr4:575843-577243 REVERSE
Length = 466
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+LL C + LS A +L+ + P + S +L++ Q + +EL ++ +
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
GF PD+++Y + + + + + +LL M +G P++ YN +I G C+E R D
Sbjct: 254 KGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMD 313
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
A K+ D+M ++V+Y +LI G C G D+ E M
Sbjct: 314 ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Query: 102 PLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQF-DKV 160
PL +F+ L V E+K+ + ++ + P LN +L LV + + K
Sbjct: 116 PLTGEIFT-YLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKA 174
Query: 161 IELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGG 220
ELF + G P+ +Y +QA D++ +L M +R + P+V Y +LI G
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 221 LCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
C++ ++ A +L D+M + V ++Y +L++ C+ ++ +A+ L RMK
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L +A EL+ R G P S N+L+++ +LF ++ + PD +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+Q + G VN +ELL+ M +G P+ Y L+ LC++ ++ +A KL M +
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRE 270
V YN++I G+C+ D+A + R+
Sbjct: 291 CNPDLVHYNTMILGFCR---EDRAMDARK 316
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C ++ A EL + G P S LL SL Q + +L ++ G PD
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDL 295
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + + ++L+ M G PN Y LIGGLC + + +K +E
Sbjct: 296 VHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEE 355
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
M + N L+ G+C G+V++A ++ E + K
Sbjct: 356 MISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 393
>AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1955959-1959051 FORWARD
Length = 1030
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+S+A E + +I++ G+ P + + +++ L KQF+K LF E+ ++G PD +
Sbjct: 414 VSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITA 473
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
V + V + ++ SM ++GI+P Y++ + LC+ R + K+F++M+ K
Sbjct: 474 VVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASK 533
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
+V ++ +I K GE +K ++E K+ N
Sbjct: 534 IVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSN 568
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%)
Query: 138 FPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIE 197
FP + ++ +R+L + ++ + + D+ TYG V ++ GD+ K ++
Sbjct: 816 FPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALD 875
Query: 198 LLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYC 257
+ SM + G +P V +Y LI KE+++ + +M S VTY ++I GY
Sbjct: 876 KVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYM 935
Query: 258 KVGEVDKAFNLRERMKK 274
+G+V++A+N M++
Sbjct: 936 SLGKVEEAWNAFRNMEE 952
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L +A + + ++ G P + L+ KQ +KV+E +++ P +TY
Sbjct: 870 LQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTA 929
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + LG V + +M +RG P+ Y+ I LC+ + DA KL EM +
Sbjct: 930 MICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKG 989
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKA 265
+ ST+ + ++ G + G+ D A
Sbjct: 990 IAPSTINFRTVFYGLNREGKHDLA 1013
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 1/170 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+ ++L C + + +A E+ +++R K +++ + K +E F I
Sbjct: 366 YFEILVKGLCRANRMVDALEIVDIMKRR-KLDDSNVYGIIISGYLRQNDVSKALEQFEVI 424
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
+ SG P TY + +Q KL KG L M + GI P+ ++ G + R+
Sbjct: 425 KKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRV 484
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+A K+F M ++ + + +Y+ + C+ D+ + +M +
Sbjct: 485 AEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKI 534
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%)
Query: 133 RRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDV 192
++DG +G N +L + + D V EL E++ +G D T+ + K +
Sbjct: 181 QKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI 240
Query: 193 NKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSL 252
KG+ + E M K G + YN++I LC R A + + EM ++ + TY L
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300
Query: 253 IDGYCKVGEVDKAFNLRERM 272
+D K +VD ++ + M
Sbjct: 301 LDCIAKSEKVDVVQSIADDM 320
>AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5949006-5949644 REVERSE
Length = 212
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ EA ++ + G P + + NM++R F + +L+ E+ G PD
Sbjct: 25 CKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLYAEMIRRGLVPDT 80
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + K + + R + + +N LI G CK R+ D LF E
Sbjct: 81 ITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCE 131
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
MY+R +V + +TY +LI G+ +VG+ + A ++ + M V
Sbjct: 132 MYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGV 172
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N+++ L +FD+ +F + SG +PD TY ++ + + +L M +
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTY----NMMIRFSSLGRAEKLYAEMIR 73
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
RG+ P+ YN +I GLCK+ ++ A RK+ S T+N+LI+GYCK V
Sbjct: 74 RGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKD 124
Query: 265 AFNLRERMKKENVEMN 280
NL M + + N
Sbjct: 125 GMNLFCEMYRRGIVAN 140
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+F +++S D Y + K G ++ + ++ G++P+V YN++I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+ +G AEKL+ EM +R LV T+TYNS+I G CK ++ +A
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA 99
>AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4543265-4545256 REVERSE
Length = 634
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A E + GK PA+ +L+ L ++L + D +I+ + + G+ + +Y +
Sbjct: 346 AVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMIS 405
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
K G V + L+ M K G+ P+V +YN LI CK I A+KL+DEM+
Sbjct: 406 FLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKM 465
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ TYN LI + GE +++ L ++M + +E
Sbjct: 466 NLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIE 499
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
L+ S C++ + E+ ++++G P + N L+ + + +L+ E+
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G + + TY ++ + G+ + + L + M +RGI P+ IY LI GLCKE +I A
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Query: 231 EKLFDEMYKRKLVGSTVTYNSL---IDGYCKVGEVDKAFN-LRERMKKEN 276
++F + +R TVT L + C G +A LRER E+
Sbjct: 522 MEVFRKCMERD--HKTVTRRVLSEFVLNLCSNGHSGEASQLLREREHLEH 569
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
+K L+EA E+ +I GKFP + L V D +E + + +G P T
Sbjct: 306 AKRLTEAKEVAEVIV-SGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRT 364
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
K + + + I+ E ++ +G + Y+++I LCK R+ ++ EM
Sbjct: 365 LSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMK 424
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
K L YN+LI+ CK + A L + M E +MN
Sbjct: 425 KEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMN 466
>AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR)
DOMAIN PROTEIN 40) | chr3:5768401-5770380 REVERSE
Length = 659
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 135 DGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNK 194
DG ++ S N ++ L ++ + E+QD G P+ +T+ + GDV K
Sbjct: 419 DGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKK 478
Query: 195 GIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLID 254
+LE + G +P+V ++++I LC+ + I DA F EM + + + +TYN LI
Sbjct: 479 VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIR 538
Query: 255 GYCKVGEVDKAFNLRERMKKENV 277
C G+ D++ L +MK+ +
Sbjct: 539 SCCSTGDTDRSVKLFAKMKENGL 561
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ + C +K + +A + + + G P + N+L+RS D+ ++LF
Sbjct: 496 ITFS-LIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFA 554
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+++++G PD Y +Q+ K+ V K ELL++M + G++P+ F Y+ LI L +
Sbjct: 555 KMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESG 614
Query: 226 RIGDAEKLFDEMYKRKLVGSTVT 248
R +A ++F + + V + T
Sbjct: 615 RESEAREMFSSIERHGCVPDSYT 637
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 65/127 (51%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + ++++ L K+ + F E+ + G P+++TY +++ GD ++ ++L
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M + G+ P+++ YN I CK R++ AE+L M + L TY++LI +
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 259 VGEVDKA 265
G +A
Sbjct: 613 SGRESEA 619
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P+ N ++ +LV D F +++ G +PD+ TY + K G V++
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
I L++ M + G RPNVF Y +LI G R+ +A K + M RKL + T + + G
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 256 Y------CKVGEVDKAF 266
CK EV F
Sbjct: 295 IFRCLPPCKAFEVLVGF 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
LQ V D + + M E + I G P + N + L+ + +
Sbjct: 318 LQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRI 377
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
F G +P Y VQA + ++G L+ M G+ +V+ YN +I LCK
Sbjct: 378 FDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCK 437
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
RRI +A EM R + + VT+N+ + GY G+V K + E++
Sbjct: 438 ARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%)
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
++F +I G +P Y + A VK ++ + M G +P+ F YN+LI G+
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
CK+ + +A +L +M + + TY LIDG+ G VD+A E M+ + N
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPN 284
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Query: 103 LLQLVFS-DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVI 161
LL V+S + + C+++ + A ++ G P L + N L KV
Sbjct: 421 LLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVH 480
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
+ ++ GF+PD +T+ + + ++ + + M + GI PN YN+LI
Sbjct: 481 GVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSC 540
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
C + KLF +M + L YN+ I +CK+ +V KA L + M
Sbjct: 541 CSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTM 591
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
+ +I + G+ PD T+ A+ +K D+ + + + RG++P Y VL+ L
Sbjct: 341 QFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQAL 400
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+R + ++ +M L+ S +YN++ID CK ++ A M+ + N
Sbjct: 401 LNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPN 459
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L VC + +L EA + ++ G P + +LN ++ + K + +++ G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
F P TY + + D K E+L + +GI+P++ YN +I C+ R+ DA
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++F EM +V +TYN+ I Y ++A + M K N
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPN 768
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDF-KQFDKVIELFMEIQDS 170
L S S EA ++ + DG P L + N++L ++K+ L +++
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G PD TY + + + ++ E M G + YN L+ K R +A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
K+ +EM S VTYNSLI Y + G +D+A L+ +M ++ +
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%)
Query: 126 TELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQA 185
T L ++ DG P + N L+ + ++F E++ +GF DK+TY +
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV 323
Query: 186 AVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGS 245
K + +++L M G P++ YN LI ++ + +A +L ++M ++
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 246 TVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
TY +L+ G+ + G+V+ A ++ E M+ + N
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 76/167 (45%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V + L S ML EA EL + + G P + + LL + + + +F
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E++++G +P+ T+ ++ G + +++ + + G+ P++ +N L+ +
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ +F EM + V T+N+LI Y + G ++A + RM
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
V + L V +S EA ++ + + +G P++ + N L+ + D+ +EL +
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+ + G +PD TY + + G V + + E M G +PN+ +N I +
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ K+FDE+ L VT+N+L+ + + G + + + MK+
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+E +++ I G P + + N LL +V +F E++ +GF P++ T+
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ A + G + + + M G+ P++ YN ++ L + +EK+ EM +
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ +TY SL+ Y E+ +L E + +E
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V + L +V ++ M SE + ++ ++R G P + N L+ + F++ + ++
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ D+G PD TY + A + G + ++L M +PN Y L+ +
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGK 573
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK---VGEVDKAFN-LRER 271
IG L +E+Y + V +L+ K + E ++AF+ L+ER
Sbjct: 574 EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
>AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:360918-363050 REVERSE
Length = 710
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N L+RS + F + ++LF ++ G P +T+ + +K G +L + M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 204 KR-GIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
+ G+ P+ + +N LI G CK + +A ++F +M VTYN++IDG C+ G+V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 263 DKAFNLRERMKKENVEMN 280
A N+ M K+ +++
Sbjct: 261 KIAHNVLSGMLKKATDVH 278
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRD-GKFPALGSLNMLLRSLVDFKQFDKVIELF 164
L F+ LL S+ + A +L+ +RR G P + N L+ D+ +F
Sbjct: 174 LTFNSLL-SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIF 232
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG--IRPNVFIYNVLIGGLC 222
+++ PD +TY + + G V +L M K+ + PNV Y L+ G C
Sbjct: 233 KDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYC 292
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
++ I +A +F +M R L + VTYN+LI G + D+
Sbjct: 293 MKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDE 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
+++QD F +YG A G + ++L ++M + GI P+V +N L+ L K
Sbjct: 134 VKLQDRYFNSLIRSYGNA-------GLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKR 186
Query: 225 RRIGDAEKLFDEMYKRKLVGST---VTYNSLIDGYCKVGEVDKAFNLRERMK 273
R G A LFDEM R+ G T T+N+LI+G+CK VD+AF + + M+
Sbjct: 187 GRTGMAHDLFDEM--RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME 236
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 121 MLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS-GFRPDKMTY 179
+ E+ +L+ +++ G P++ + N LL L+ + +LF E++ + G PD T+
Sbjct: 153 LFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTF 212
Query: 180 GKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYK 239
+ K V++ + + M P+V YN +I GLC+ ++ A + M K
Sbjct: 213 NTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLK 272
Query: 240 RK--LVGSTVTYNSLIDGYCKVGEVDKA 265
+ + + V+Y +L+ GYC E+D+A
Sbjct: 273 KATDVHPNVVSYTTLVRGYCMKQEIDEA 300
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD--SGFRP 174
C + + EA ++H + G P + N L++ L + ++D++ ++ + D + F P
Sbjct: 292 CMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAP 351
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
D T+ ++A G ++ +++ + M + P+ Y+VLI LC AE LF
Sbjct: 352 DACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLF 411
Query: 235 DEMYKRK-LVGS------TVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+E+++++ L+G YN + + C G+ +A + ++ K V+
Sbjct: 412 NELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ 462
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L C++ L A +++ + P S ++L+R+L +FD+ LF E+ +
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 416
Query: 170 SGF-------RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIR--PNVFIYNVLIGG 220
+P Y + G + ++ + KRG++ P+ Y LI G
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPS---YKTLITG 473
Query: 221 LCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
C+E + A +L M +R+ V TY LIDG K+GE A + +RM
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM 525
>AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11126151-11128334 FORWARD
Length = 727
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L C++ + E E+ +R + P + + ++++LV D + ++ E++
Sbjct: 268 ILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRD 327
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
+PD M YG V K G V +G EL M + I + IY VLI G + ++ A
Sbjct: 328 EIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSA 387
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
L++++ + YN++I G C V +VDKA+ L + +E +E
Sbjct: 388 CNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELE 435
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 76/146 (52%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A +Y + DG + +L++ L + ++++E+ ++++ +PD Y ++
Sbjct: 247 ALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIK 306
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
V G+++ + + + M + I+P+V Y L+ GLCK+ R+ +LF EM ++++
Sbjct: 307 TLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI 366
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRE 270
Y LI+G+ G+V A NL E
Sbjct: 367 DREIYRVLIEGFVADGKVRSACNLWE 392
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 78/150 (52%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
+Y +++ G P + N ++ +LV FD + ++ + ++ G + T+ V+
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
K G + + +E+L+ M + +P+VF Y +I L E + + +++DEM + ++ +
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
Y +L+ G CK G V++ + L MK + +
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQI 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 72/154 (46%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A +L L+ G+ P+ +L+R D ++ +V ++ +++ GF+P Y + +
Sbjct: 177 ADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMD 236
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
A VK G + + + E + G+ + +L+ GLCK RI + ++ M +
Sbjct: 237 ALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKP 296
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
Y ++I G +D + + + M+++ ++
Sbjct: 297 DVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L + ++ +RRD P + + L+ L + ++ ELFME++ D+ Y
Sbjct: 314 LDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRV 373
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++ V G V L E + G ++ IYN +I GLC ++ A KLF + +
Sbjct: 374 LIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE 433
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
L T + ++ Y + + N+ ER+
Sbjct: 434 LEPDFETLSPIMVAYVVMNRLSDFSNVLERI 464
>AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13490251-13491458 FORWARD
Length = 369
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V +L C+++++ A E+ ++ G P + + + L+ L +
Sbjct: 48 VVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLH 107
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ P+ +T+ + A K G ++K + + M + I PNVF Y+ LI GLC
Sbjct: 108 EMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHN 167
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ +A K+ D M + + VTY++L +G+ K VD L + M + V N
Sbjct: 168 RVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 222
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L + C+S L++A H + P + + + L+ + + KV ++ +
Sbjct: 89 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 148
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ TY + V++ I++L+ M +G PNV Y+ L G K R+ D
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 208
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
KL D+M +R + +TV+ N+LI GY + G++D A +
Sbjct: 209 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGV 245
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 1/171 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+S L++ +C ++ + EA ++ L+ G P + + + L + D I+L ++
Sbjct: 156 YSSLIYGLCMHNR-VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 214
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
G + ++ ++ + G ++ + + MT G+ PN+ YN+++ GL +
Sbjct: 215 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 274
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
A F+ M K + +TY +I G CK V +A++L ++K + VE
Sbjct: 275 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVE 325
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS L+ + K LS+ +Y ++ + P + + + L+ L + D+ I++
Sbjct: 119 ITFSALIDAYAKRGK-LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 177
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ G P+ +TY K V+ GI+LL+ M +RG+ N N LI G +
Sbjct: 178 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 237
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+I A +F M L+ + +YN ++ G GEV+KA + E M+K
Sbjct: 238 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 286
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G PD +T V + + + M K GI+ +V + +LI LCK R + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
++ M R + + VTY+SLI G CK G + A
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 102
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
+K +L + RDG P + N L+ S ++ + +F ++Q++G +PD++T
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
Y + K G ++ +++ + M G+ P+ F Y+V+I L K + A KLF EM
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ + VTYN ++D + K A L M+ E
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L + ++ L A ++Y ++ G P + ++++ L +LF E+ D G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ +TY + K + ++L M G P+ Y++++ L + +AE
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+F EM ++ + Y L+D + K G V+KA+ + M + N
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 73/151 (48%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L A +L+ + G P L + N+++ + + ++L+ ++Q++GF PDK+TY
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++ G + + + M ++ P+ +Y +L+ K + A + + M
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
L + T NSL+ + +V ++ +A+ L + M
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV +++ + +++ A +LY ++ G P + ++++ L ++ +F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+Q + PD+ YG V K G+V K + ++M G+RPNV N L+ +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
+I +A +L M L S TY L+
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
+K +L + RDG P + N L+ S ++ + +F ++Q++G +PD++T
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
Y + K G ++ +++ + M G+ P+ F Y+V+I L K + A KLF EM
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ + VTYN ++D + K A L M+ E
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L + ++ L A ++Y ++ G P + ++++ L +LF E+ D G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ +TY + K + ++L M G P+ Y++++ L + +AE
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+F EM ++ + Y L+D + K G V+KA+ + M + N
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 73/151 (48%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L A +L+ + G P L + N+++ + + ++L+ ++Q++GF PDK+TY
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++ G + + + M ++ P+ +Y +L+ K + A + + M
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
L + T NSL+ + +V ++ +A+ L + M
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV +++ + +++ A +LY ++ G P + ++++ L ++ +F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+Q + PD+ YG V K G+V K + ++M G+RPNV N L+ +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
+I +A +L M L S TY L+
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 139 PALGSLNMLLRSLVD-FKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIE 197
P S N ++R L + + + + L+ ++ SG +PDK TY A KL ++ G
Sbjct: 90 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 149
Query: 198 LLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYC 257
+ S+ K G+ +V I + LI K ++G A KLFDE+ +R TV++NS+I GY
Sbjct: 150 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYS 205
Query: 258 KVGEVDKAFNLRERMKKENVE 278
+ G A +L +M++E E
Sbjct: 206 EAGYAKDAMDLFRKMEEEGFE 226
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N ++ + ++LF ++++ GF PD+ T + A LGD+ G L E
Sbjct: 196 SWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA 255
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
+ I + F+ + LI K + A ++F++M K+ V + ++I Y + G+
Sbjct: 256 ITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKS 311
Query: 263 DKAFNLRERMKKENV 277
+AF L M+K V
Sbjct: 312 SEAFKLFFEMEKTGV 326
>AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-10672740
REVERSE
Length = 806
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI-QDSGFRPD 175
C+ + EA EL + G P S ++ L K+ +V +L ++ ++ G PD
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD 382
Query: 176 KMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD 235
++TY + K ++ + L+ ++G R + Y+ ++ LCKE R+ +A+ L +
Sbjct: 383 QVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLIN 442
Query: 236 EMY-KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
EM K VTY ++++G+C++GEVDKA L + M + N
Sbjct: 443 EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 117 CESKMLSEATELYH-LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPD 175
C+ K + E +L + + G P + N L+ L D+ + + Q+ GFR D
Sbjct: 358 CKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRID 417
Query: 176 KMTYGKAVQAAVKLGDVNKGIELLESMTKRG-IRPNVFIYNVLIGGLCKERRIGDAEKLF 234
K+ Y V A K G +++ +L+ M +G P+V Y ++ G C+ + A+KL
Sbjct: 418 KLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL 477
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M+ +TV+Y +L++G C+ G K+ RE M
Sbjct: 478 QVMHTHGHKPNTVSYTALLNGMCRTG---KSLEAREMM 512
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 80/165 (48%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ V ++K+ + + L++R G + + + ++ S Q +++ +Q +G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ + + V+ + K + LE M GI PNV YN +I G C R+ +A
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
+L ++M+ + + V+Y +++ CK + + +L ++M KE+
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEH 377
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
LSEA ++ + G FP +N+LL+SL + + + E + G + + +
Sbjct: 540 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 599
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + +++ + +L+ M +VF Y L+ L K+ RI +A +L +M +
Sbjct: 600 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 659
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ + VTY ++I YC++G+VD + E+M
Sbjct: 660 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 72/156 (46%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + +A +L ++ G P S LL + + + E+ ++ + P+
Sbjct: 465 CRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNS 524
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + + G +++ +++ M +G P N+L+ LC++ R +A K +E
Sbjct: 525 ITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ + V + ++I G+C+ E+D A ++ + M
Sbjct: 585 CLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPA-LGSLNMLLRSLVDFKQFDKVIEL 163
+L +S ++ ++C E +M SEA +L + + G P + + ++ + DK +L
Sbjct: 418 KLGYSAIVHALCKEGRM-SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
+ G +P+ ++Y + + G + E++ + PN Y+V++ GL +
Sbjct: 477 LQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 536
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
E ++ +A + EM + V N L+ C+ G +A E + +N
Sbjct: 537 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN 593
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
++ LL +C K L EA E+ ++ P + ++++ L + + ++ E+
Sbjct: 492 YTALLNGMCRTGKSL-EAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREM 550
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
GF P + +Q+ + G ++ + +E +G NV + +I G C+ +
Sbjct: 551 VLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDEL 610
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
A + D+MY TY +L+D K G + +A L ++M + ++
Sbjct: 611 DAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGID 661
>AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: EMB2745 (EMBRYO
DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 13180 Blast hits
to 4377 proteins in 153 species: Archae - 4; Bacteria -
12; Metazoa - 210; Fungi - 191; Plants - 12251; Viruses
- 0; Other Eukaryotes - 512 (source: NCBI BLink). |
chr1:29087145-29088521 FORWARD
Length = 458
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFR--PD 175
E + EA ++ ++ P + + N ++ +L F K L ++Q GFR PD
Sbjct: 177 EEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPD 236
Query: 176 KMTYGKAVQAAVKLG---DVNKGIE--------LLESMTKRGIRPNVFIYNVLIGGLCKE 224
TY + + + G K I + M RG P+V YN LI G CK
Sbjct: 237 TYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKT 296
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
RIG A +LF++M + V + VTYNS I Y E++ A + MKK
Sbjct: 297 NRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 133 RRDGK-FPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGD 191
R +GK S+ L++ L + + + F +++ +PD Y + A ++G+
Sbjct: 156 RENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGN 215
Query: 192 VNKGIELLESMTKRGIR--PNVFIYNVLIGGLCK-----------ERRIGDAEKLFDEMY 238
K LL+ M G R P+ + Y +LI C+ RR+ +A ++F EM
Sbjct: 216 FKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREML 275
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R V VTYN LIDG CK + +A L E MK + N
Sbjct: 276 FRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 120 KMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTY 179
+ + EA ++ + G P + + N L+ + + +ELF +++ G P+++TY
Sbjct: 262 RRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTY 321
Query: 180 GKAVQAAVKLGDVNKGIELLESMTKRGIR-PNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
++ ++ IE++ +M K G P Y LI L + RR +A L EM
Sbjct: 322 NSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMV 381
Query: 239 KRKLVGSTVTYNSLIDGYCKVG 260
+ LV TY + D G
Sbjct: 382 EAGLVPREYTYKLVCDALSSEG 403
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+F + C+ + AT ++ + G P + N ++ + K D +F E+ + G
Sbjct: 455 IFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG 514
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ TY + K D +++ M N IYN +I GLCK + A+
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 232 KLFDEMYKRKLVG-STVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
++ + K K S +YNS+IDG+ KVG+ D A M +
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSE 618
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 82/161 (50%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + A L+ + G P + N L+ + + D I+L+ ++ + G D
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDL 730
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + +K G++N +L + GI P+ ++ VL+ GL K+ + A K+ +E
Sbjct: 731 FTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEE 790
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
M K+ + + + Y+++I G+ + G +++AF L + M ++ +
Sbjct: 791 MKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Query: 107 VFSDLLFSVCCESKMLSEATE-LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
V + + + C+ S+A E L +LI+ + S N ++ V D +E +
Sbjct: 555 VIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYR 614
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ ++G P+ +T+ + K ++ +E+ M ++ ++ Y LI G CK+
Sbjct: 615 EMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKN 674
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ A LF E+ + L+ + YNSLI G+ +G++D A +L ++M + +
Sbjct: 675 DMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ A +LY + DG L + ++ L+ + +L+ E+ D G PD++ +
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
V K G K ++LE M K+ + PNV +Y+ +I G +E + +A +L DEM ++
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 242 LVGSTVTYNSLIDG 255
+V +N L+ G
Sbjct: 831 IVHDDTVFNLLVSG 844
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
+ D ++ G P+ + Y + A ++ +++ + M ++G+ PN F Y+
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS 523
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+LI G K + +A + ++M + V YN++I+G CKVG+ KA + + + KE
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 34/198 (17%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L +A +L++ + +G P ++++ + +K IE +M ++ P
Sbjct: 356 CKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSS 415
Query: 177 MTYGKAVQAAVKL----------------------------------GDVNKGIELLESM 202
+ +Q +K G V+ L+ M
Sbjct: 416 VLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMM 475
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
++GI PNV YN ++ C+ + + A +F EM ++ L + TY+ LIDG+ K +
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Query: 263 DKAFNLRERMKKENVEMN 280
A+++ +M N E N
Sbjct: 536 QNAWDVINQMNASNFEAN 553
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A E Y + +GK P + + L+ + D +E+ E++ + D YG +
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
K D+ L + + G+ PNV +YN LI G ++ A L+ +M +
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 245 STVTYNSLIDGYCKVGEVDKAFNL 268
TY ++IDG K G ++ A +L
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDL 752
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 36/198 (18%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ S S ++ EA E+Y+ + G + +L+R+ + ++ ++ +++F + G
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 172 FRPDKMTYGKAVQAA------------------------------------VKLGDVNKG 195
PD + + AVQAA VK G++ +
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+ +++ M GI +V L+ G CK +G A LF+ M + L V ++ +++
Sbjct: 330 VRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEW 389
Query: 256 YCKVGEVDKAFNLRERMK 273
+CK E++KA RMK
Sbjct: 390 FCKNMEMEKAIEFYMRMK 407
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+VF + + C K + A ++ + G P + ++L+ K ++
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK-RGIRPNVFIYNVLIGGLCK 223
++ S F +++ Y + K+G +K E+L+++ K + + YN +I G K
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVK 602
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
A + + EM + + VT+ SLI+G+CK +D A + MK
Sbjct: 603 VGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 85/204 (41%), Gaps = 36/204 (17%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+ L + +K + A + + L+ P + +N +L SLV D+ E++ ++
Sbjct: 173 NYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVL 232
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC------- 222
G D +T ++A+++ + +++ + RG P+ ++++ + C
Sbjct: 233 IGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVM 292
Query: 223 -----------------------------KERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
KE + +A ++ DEM + S + SL+
Sbjct: 293 ALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLV 352
Query: 254 DGYCKVGEVDKAFNLRERMKKENV 277
+GYCK E+ KA +L RM++E +
Sbjct: 353 NGYCKGNELGKALDLFNRMEEEGL 376
>AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27598412-27599812 FORWARD
Length = 466
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Query: 117 CESKMLSEATELYHLIRRDGKF---PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFR 173
C++ M+ EA +L+ + G P + +++ +L + ++ EL + +G
Sbjct: 212 CQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCL 271
Query: 174 PDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKL 233
PD TY ++ V++ + L+ M+ +G P++ YN + LC+ R+ +A KL
Sbjct: 272 PDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKL 331
Query: 234 FDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
+ M + + S TYN LI + ++ + D AFN M K +
Sbjct: 332 YGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRD 374
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L C+ ++ E L +R K P + N+L + K ++L E+ +
Sbjct: 136 NMLLDALCKCGLVKEGEALLRRMRHRVK-PDANTFNVLFFGWCRVRDPKKAMKLLEEMIE 194
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG---IRPNVFIYNVLIGGLCKERR 226
+G +P+ TY A+ + G V++ +L + M +G P + ++I L K +
Sbjct: 195 AGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDK 254
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ +L M + TY +I+G C +VD+A+ + M
Sbjct: 255 AEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK 232
+P+ + + A K G V +G LL M R ++P+ +NVL G C+ R A K
Sbjct: 129 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMK 187
Query: 233 LFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
L +EM + TY + ID +C+ G VD+A +L + M
Sbjct: 188 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 227
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C ++ + EA + + G P + + N LR L + ++ D+ ++L+ + +S P
Sbjct: 285 CMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSV 344
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + ++ D + M KR +V Y +I GL R +A L +E
Sbjct: 345 QTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEE 404
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ + L ++S + +VG + + E MKK
Sbjct: 405 VVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKK 442
>AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G27800.1); Has 13348 Blast hits to 4225
proteins in 143 species: Archae - 3; Bacteria - 6;
Metazoa - 114; Fungi - 126; Plants - 12736; Viruses - 0;
Other Eukaryotes - 363 (source: NCBI BLink). |
chr3:9180348-9181487 FORWARD
Length = 379
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%)
Query: 132 IRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGD 191
++ +G P LNM++++ + D+ I +F E+ G P+ TY V+ + G
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 192 VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
V +G+ + M +G+ PN Y VLI L ERR+ +A ++ +M L +TYN+
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 252 LIDGYCKVGEVDKAFNLRERMKKENVEM 279
++ C+ G +A + E KK + M
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKRDPVM 361
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 110 DLLFSVCCESKML-SEATELYH-LIRRDGKFPALGSLNMLLRSLVDFKQFDK-------- 159
+ + CC K L + A ++Y+ ++R D P L + +LL SL+ K+F+K
Sbjct: 147 NCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLL--KRFNKLNVCYVYL 204
Query: 160 --VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVL 217
V L +++ +G PD ++A K +V++ I + + M G PN + Y+ L
Sbjct: 205 HAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYL 264
Query: 218 IGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
+ G+C++ R+G + EM + +V + Y LI
Sbjct: 265 VKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLI 300
>AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10332375-10334558 REVERSE
Length = 727
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S C+ + +A + ++ G L + NML+ D +KV E+ +++ G
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
+PD +TY + K D ++E M + G+ P V Y +I C + +A
Sbjct: 577 KKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEAL 636
Query: 232 KLFDEM-YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
KLF +M K+ +TV YN LI+ + K+G +A +L+E MK + V N
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM-- 202
N LL L ++ +L +++ + RPD +T G + K V++ +E+ E M
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRG 357
Query: 203 --TKRG--IRPNVFIYNVLIGGLCKERRIGDAEKLFDEM-YKRKLVGSTVTYNSLIDGYC 257
T G I+ + +N LI GLCK R+ +AE+L M + + V + VTYN LIDGYC
Sbjct: 358 KRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYC 417
Query: 258 KVGEVDKAFNLRERMKKENVEMN 280
+ G+++ A + RMK++ ++ N
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPN 440
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 111 LLFSVCCESKMLSEATELYHLIR----RDGKFPALGSL--NMLLRSLVDFKQFDKVIELF 164
+L + C+S+ + EA E++ +R DG S+ N L+ L + + EL
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 165 MEIQ-DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
+ ++ + P+ +TY + + G + E++ M + I+PNV N ++GG+C+
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ A F +M K + G+ VTY +LI C V V+KA E+M
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + L A E+ ++ D P + ++N ++ + + + FM+++ G + +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + A + +V K + E M + G P+ IY LI GLC+ RR DA ++ ++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + YN LI +C +K + + M+KE
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L CC + +A Y + G P L+ L ++ I + ++++ G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
F D + Y + + K E+L M K G +P+ YN LI K + E
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
++ ++M + L + TY ++ID YC VGE+D+A L + M
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
L L+ ++L + C+ + E+ + ++GK P + N L+ K F+ V +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG-IRPNVFIYNVLIGGLC 222
++++ G P TYG + A +G++++ ++L + M + PN IYN+LI
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTV-TYNSL 252
K G A L +EM K K+V V TYN+L
Sbjct: 664 KLGNFGQALSLKEEM-KMKMVRPNVETYNAL 693
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQ----DSG--FRPDKMTYGKAVQAAVKLGDV 192
P + +L +L+ +L ++ D+ +E+F +++ D G + D + + + K+G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 193 NKGIELLESMT--KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
+ ELL M +R + PN YN LI G C+ ++ A+++ M + ++ + VT N
Sbjct: 387 KEAEELLVRMKLEERCV-PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+++ G C+ ++ A M+KE V+ N
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 132 IRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ-DSGFRPDKMTYGKAVQAAVKLG 190
+R DG P + + ++ + + D+ ++LF ++ S P+ + Y + A KLG
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
+ + + L E M + +RPNV YN L L ++ + KL DEM
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
>AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10374927-10377227 FORWARD
Length = 766
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM-- 202
N LL L ++ +L +++ + RPD +T G + K V++ +E+ E M
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRG 357
Query: 203 --TKRG--IRPNVFIYNVLIGGLCKERRIGDAEKLFDEM-YKRKLVGSTVTYNSLIDGYC 257
T G I+ + +N LI GLCK R+ +AE+L M + + V + VTYN LIDGYC
Sbjct: 358 KRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYC 417
Query: 258 KVGEVDKAFNLRERMKKENVEMN 280
+ G+++ A + RMK++ ++ N
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPN 440
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 111 LLFSVCCESKMLSEATELYHLIR----RDGKFPALGSL--NMLLRSLVDFKQFDKVIELF 164
+L + C+S+ + EA E++ +R DG S+ N L+ L + + EL
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 165 MEIQ-DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
+ ++ + P+ +TY + + G + E++ M + I+PNV N ++GG+C+
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ A F +M K + G+ VTY +LI C V V+KA E+M
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L CC + +A Y + G P L+ L ++ I + ++++ G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
F D + Y + + K E+L M K G +P+ YN LI K + E
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
++ ++M + L + TY ++ID YC VGE+D+A L + M
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + L A E+ ++ D P + ++N ++ + + + FM+++ G + +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + A + +V K + E M + G P+ IY LI GLC+ RR DA ++ ++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + YN LI +C +K + + M+KE
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
L L+ ++L + C+ + E+ + ++GK P + N L+ K F+ V +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG-IRPNVFIYNVLIGGLC 222
++++ G P TYG + A +G++++ ++L + M + PN IYN+LI
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTV-TYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
K G A L +EM K K+V V TYN+L + + + L + M +++ E N
Sbjct: 664 KLGNFGQALSLKEEM-KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQ----DSG--FRPDKMTYGKAVQAAVKLGDV 192
P + +L +L+ +L ++ D+ +E+F +++ D G + D + + + K+G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 193 NKGIELLESMT-KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
+ ELL M + PN YN LI G C+ ++ A+++ M + ++ + VT N+
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 252 LIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ G C+ ++ A M+KE V+ N
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 132 IRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ-DSGFRPDKMTYGKAVQAAVKLG 190
+R DG P + + ++ + + D+ ++LF ++ S P+ + Y + A KLG
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
+ + + L E M + +RPNV YN L L ++ + KL DEM ++ + +T
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITME 726
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENV 277
L++ ++ D+ LR+ M+ +V
Sbjct: 727 ILME---RLSGSDELVKLRKFMQGYSV 750
>AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ + EA ++ G P + S ++R +F KV E+ E++ +G P+
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD- 235
+TY + + + + + + M + G +P+ YN LI L + R+ +AE++F
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354
Query: 236 EMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
EM + + +T TYNS+I YC E DKA L + M+ N+
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
>AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ + EA ++ G P + S ++R +F KV E+ E++ +G P+
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFD- 235
+TY + + + + + + M + G +P+ YN LI L + R+ +AE++F
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354
Query: 236 EMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
EM + + +T TYNS+I YC E DKA L + M+ N+
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + A+ L+ + +G P+ N L+ + ++L+ ++ G R D
Sbjct: 665 CKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDL 724
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY + +K G++ EL M G+ P+ IY V++ GL K+ + K+F+E
Sbjct: 725 GTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE 784
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M K + + + YN++I G+ + G +D+AF L + M
Sbjct: 785 MKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A +LY + +DG LG+ L+ L+ EL+ E+Q G PD++ Y V
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN 767
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
K G K +++ E M K + PNV IYN +I G +E + +A +L DEM + ++
Sbjct: 768 GLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Query: 245 STVTYNSLIDG 255
T++ L+ G
Sbjct: 828 DGATFDILVSG 838
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 36/216 (16%)
Query: 101 TPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKV 160
T L + + + S C+ EATEL + G P + S N ++ K D
Sbjct: 438 TGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
Query: 161 IELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGG 220
+F I + G +P+ TY + + D +E++ MT I N +Y +I G
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIING 557
Query: 221 LCKERRIGDAEKL------------------------------------FDEMYKRKLVG 244
LCK + A +L ++EM +
Sbjct: 558 LCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISP 617
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +TY SL++G CK +D+A +R+ MK + V+++
Sbjct: 618 NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDG---KFPALGSLNMLLRSLVDFKQFDKVIE 162
+ ++ L+ +C ++M +A E+ ++ G PA G+L + +
Sbjct: 620 ITYTSLMNGLCKNNRM-DQALEMRDEMKNKGVKLDIPAYGAL---IDGFCKRSNMESASA 675
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
LF E+ + G P + Y + LG++ ++L + M K G+R ++ Y LI GL
Sbjct: 676 LFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
K+ + A +L+ EM LV + Y +++G K G+ K + E MKK NV N
Sbjct: 736 KDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN 793
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 146 MLLRSLVD--FKQ--FDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLES 201
M S++D FK+ D + + E+ +G P+ +TY + K +++ +E+ +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 202 MTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
M +G++ ++ Y LI G CK + A LF E+ + L S YNSLI G+ +G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 262 VDKAFNLRERMKKENV 277
+ A +L ++M K+ +
Sbjct: 705 MVAALDLYKKMLKDGL 720
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 1/159 (0%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ +A E Y + G P++ ++ +++ + ++ ++ ++LF E ++G +
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNT 448
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ K G ++ ELL M RGI PNV YN ++ G C+++ + A +F + ++
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
L + TY+ LIDG + + A + M N+E+N
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVN 547
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%)
Query: 174 PDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKL 233
P + TY + A+VK G+++ I L + M GI NV LI G CK + A L
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 234 FDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
FD+M K ++VT++ LI+ + K GE++KA ++M+
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 113 FSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGF 172
S + L+EA ELY + G + +L+R+ + ++ + +E+ + G
Sbjct: 205 LSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGA 264
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGI-RPNVFIYNVLIGGLCKERRIGDAE 231
PD + Y AVQA K D+ LL M ++ + P+ Y +I K+ + DA
Sbjct: 265 EPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAI 324
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+L DEM + + V SLI G+CK ++ A L ++M+KE
Sbjct: 325 RLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKE 368
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 138 FPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIE 197
P +N L +LV + EL+ + G D +T ++A+++ + +E
Sbjct: 195 IPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALE 254
Query: 198 LLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL-VGSTVTYNSLIDGY 256
+L +RG P+ +Y++ + CK + A L EM ++KL V S TY S+I
Sbjct: 255 VLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILAS 314
Query: 257 CKVGEVDKAFNLRERMKKENVEMN 280
K G +D A L++ M + + MN
Sbjct: 315 VKQGNMDDAIRLKDEMLSDGISMN 338
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
LF +++ G P+ +T+ ++ K G++ K +E + M G+ P+VF + +I G
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
K ++ +A KLFDE ++ L V N+++ CK G+ D+A L +M+ + N
Sbjct: 421 KGQKHEEALKLFDESFETGLANVFVC-NTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ A Y + +G P + + L+ L + D+ +E+ E+++ G + D YG
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ K ++ L + + G+ P+ IYN LI G + A L+ +M K
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG 719
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
L TY +LIDG K G + A L M+
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASELYTEMQ 751
>AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5117489-5119060 REVERSE
Length = 523
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPA-LGSLNMLLRSLVDFKQFDKVIELF 164
+ F LL +C K + A L+ RR+ F + ++NM+L + +
Sbjct: 214 VAFHGLLMWLC-RYKHVEFAETLFCSRRRE--FGCDIKAMNMILNGWCVLGNVHEAKRFW 270
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
+I S RPD ++YG + A K G + K +EL +M P+V I N +I LC +
Sbjct: 271 KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFK 330
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+RI +A ++F E+ ++ + VTYNSL+ CK+ +K + L E M+
Sbjct: 331 KRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
>AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7029701-7031314 FORWARD
Length = 537
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V+++L+ C + +SEA +++ ++ G P + + ++++ +L Q + ++F
Sbjct: 256 IVYTNLVRG-WCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFA 314
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ DSG P+ +T+ ++ VK G K +++ M K G P+ YN LI C++
Sbjct: 315 DMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDE 374
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +A K+ + M K+K + T+N++ K +V+ A + +M + E N
Sbjct: 375 NLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPN 429
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Query: 121 MLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYG 180
+ SEA ++ + G P + ++++ +L ++ + F ++D F PD + Y
Sbjct: 201 LASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYT 259
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
V+ + G++++ ++ + M GI PNV+ Y+++I LC+ +I A +F +M
Sbjct: 260 NLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDS 319
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ +T+N+L+ + K G +K + +MKK E
Sbjct: 320 GCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE 357
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 84/170 (49%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
++ C +S A +++ + G P + N L+R V + +KV++++ +++
Sbjct: 295 IVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 354
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G PD +TY ++A + ++ +++L +M K+ N +N + + K+R + A
Sbjct: 355 GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGA 414
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+++ +M + K +TVTYN L+ + D +++ M + VE N
Sbjct: 415 HRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPN 464
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A L L++ ++ + +L+R V + + F ++D G PDK+ + +
Sbjct: 170 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 229
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
+ ++ +S+ R P+V +Y L+ G C+ I +AEK+F EM +
Sbjct: 230 NLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 245 STVTYNSLIDGYCKVGEVDKAFNL 268
+ TY+ +ID C+ G++ +A ++
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDV 312
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 155 KQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIY 214
+QFD L ++ T+ ++ V+ G ++ + M G P+ +
Sbjct: 165 RQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAF 224
Query: 215 NVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+++I L ++RR +A+ FD + K + + Y +L+ G+C+ GE+ +A + + MK
Sbjct: 225 SIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKL 283
Query: 275 ENVEMN 280
+E N
Sbjct: 284 AGIEPN 289
>AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15637177-15639450 REVERSE
Length = 757
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 112 LFSVCCES----KMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+F V ES ++ E+ +++ ++ G + S N L + ++ ++ F ++
Sbjct: 187 MFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKM 246
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
G P + TY + + + E M RGI P+ +N +I G C+ +++
Sbjct: 247 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM 306
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+AEKLF EM K+ S V+Y ++I GY V VD + E M+ +E N
Sbjct: 307 DEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPN 359
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 74/166 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
LF V A ++ + +G P + N++L + + + F +++ G
Sbjct: 226 LFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRG 285
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD T+ + + +++ +L M I P+V Y +I G R+ D
Sbjct: 286 ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGL 345
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
++F+EM + + TY++L+ G C G++ +A N+ + M +++
Sbjct: 346 RIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHI 391
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 86/211 (40%), Gaps = 36/211 (17%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V + L CES L A L + FP + + L++ V E++
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIR-PNVFIYNVLIGGLCK- 223
E+ G +PD Y ++LGD +K L E M P++ IYNV I GLCK
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 528
Query: 224 ---------ERRI----------------------GD---AEKLFDEMYKRKLVGSTVTY 249
+R+I G A L+DEM +++L S +TY
Sbjct: 529 GNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 588
Query: 250 NSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
LI G+ K G +++AF MKK V N
Sbjct: 589 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 72/139 (51%)
Query: 134 RDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVN 193
R G P++ + N++L+ L D + +K ++ + + G P +T+ + + K GD+
Sbjct: 196 RKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLE 255
Query: 194 KGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
+ ++ M +R I + YN+LI G K ++ +A + +M + + ++N LI
Sbjct: 256 RVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLI 315
Query: 254 DGYCKVGEVDKAFNLRERM 272
+GYCK G D A+ + + M
Sbjct: 316 EGYCKQGLFDDAWGVTDEM 334
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%)
Query: 131 LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG 190
++ D P L N+ + L K IE +I G PD +TY ++ ++ G
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
L + M ++ + P+V Y VLI G K R+ A + EM KR + + +T+N
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+L+ G CK G +D+A+ +M++E + N
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 654
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + +A + + G +P + N+ + +L DF + D EL S PD
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL----SSMAAPDV 374
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
++Y + +K+G + L + + I P++ YN LI GLC+ + A++L +E
Sbjct: 375 VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEE 434
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M + + +TY +L+ G+ K G + A + + M ++ ++
Sbjct: 435 MTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+++ V +S+M+++A+ +Y + G P + + N +L S ++V ++++E++
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
++TY + K G + + M + G + +N LI G CK+ D
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
A + DEM + +T TYN I C G +D A L M +V
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDV 374
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ L +A E I R G P + ++R ++ QF L+ E+ P
Sbjct: 526 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 585
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + K G + + + M KRG+RPNV +N L+ G+CK I +A + +
Sbjct: 586 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCK 645
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M + + + +Y LI C + ++ L + M + +E
Sbjct: 646 MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 63/135 (46%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
E+ A LY + R +P++ + +L+ + ++ + E++ G RP+ M
Sbjct: 562 ENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVM 621
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
T+ + K G++++ L M + GI PN + Y +LI C + + KL+ EM
Sbjct: 622 THNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEM 681
Query: 238 YKRKLVGSTVTYNSL 252
+++ T+ +L
Sbjct: 682 LDKEIEPDGYTHRAL 696
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ SV + +EA L+ + G FP + N LL + + +KV E++ ++Q G
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK-RGIRPNVFIYNVLIGGLCKERRIGDA 230
F D+MTY + K G ++ ++L + M G P+ Y VLI L K R +A
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVG---EVDKAFN--LRERMKKENV 277
L EM + + TY++LI GY K G E + F+ LR K +N+
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 84/167 (50%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L S + A +++ + RDG P + S+N+LL +L + +++ + E+QD G
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMG 852
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
F+ K + + A + G++ + ++ SM G P + +Y ++I LCK +R+ DAE
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ EM + +NS++ Y + + K + +R+K+ +E
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLE 959
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQF--DKVIELFMEIQD 169
+ V S S+A EL +R+ G P L S N L+ + + + +EL +++
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRN 290
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
SG RPD +TY + A + +++ +++ E M +P+++ YN +I + +
Sbjct: 291 SGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAE 350
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
AE+LF E+ + VTYNSL+ + + +K + ++M+K
Sbjct: 351 AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A EL ++R G P + N LL + D +++F +++ +PD TY +
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
+ G + L + +G P+ YN L+ +ER ++++ +M K
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+TYN++I Y K G++D A L + MK
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMK 429
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%)
Query: 141 LGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLE 200
L N +L+ + + K ++++ I+++G PD+ TY + + +G L++
Sbjct: 927 LAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQ 986
Query: 201 SMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG 260
M G+ P + Y LI K++ + AE+LF+E+ + L Y++++ G
Sbjct: 987 QMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSG 1046
Query: 261 EVDKAFNLRERMKKENVE 278
KA L + MK +E
Sbjct: 1047 SDSKAEKLLQMMKNAGIE 1064
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L + C + E L +R G P L + L+ + K ++ +LF E+ G
Sbjct: 968 LIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKG 1027
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
+ D+ Y ++ + G +K +LL+ M GI P + ++L+ +AE
Sbjct: 1028 LKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAE 1087
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
K+ + ++ +T+ Y+S+ID Y + + + MKKE +E
Sbjct: 1088 KVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ LL++ E + + E+Y +++ G + N ++ Q D ++L+
Sbjct: 368 VTYNSLLYAFARE-RNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYK 426
Query: 166 EIQD-SGFRPDKMTYGKAVQAAVKLGDVNKGIE---LLESMTKRGIRPNVFIYNVLIGGL 221
+++ SG PD +TY + + LG N+ +E L+ M GI+P + Y+ LI G
Sbjct: 427 DMKGLSGRNPDAITYTVLIDS---LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGY 483
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
K + +AE F M + + Y+ ++D + E KA+ L M
Sbjct: 484 AKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 73/157 (46%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
E ++Y ++ G P + M++ L K+ + E++++ F+ + + +
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
+ + D K +++ + + + G+ P+ YN LI C++RR + L +M L
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
TY SLI + K +++A L E + + ++++
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + + N+ L L + ++ F + G PD ++Y + + G V
Sbjct: 109 GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA-EKLFDEMYKRKLVGSTVTYNSLID 254
+E+ +M + G+ P+ L+ GLC R++ A E + +E+ ++ STV YN+LI
Sbjct: 169 VEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALIS 228
Query: 255 GYCKVGEVDKAFNLRERMKKENVE 278
G+CK G ++KA L+ M K E
Sbjct: 229 GFCKAGRIEKAEALKSYMSKIGCE 252
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 71/136 (52%)
Query: 138 FPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIE 197
F + S + L+ + K LF E++ G + +TY ++A ++ G+ + +
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 198 LLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYC 257
LL+ MT+ G+ P+ Y ++ LCK + A +F++M + ++ ++YNSLI G C
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 258 KVGEVDKAFNLRERMK 273
+ G V +A L E MK
Sbjct: 442 RSGRVTEAIKLFEDMK 457
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 76/156 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + +A L+ +R+ G + + L+++ + +L ++ + G PD+
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + K G+V+K + M + I P+ YN LI GLC+ R+ +A KLF++
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFED 455
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M ++ +T+ +I G + ++ A+ + ++M
Sbjct: 456 MKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV ++L + ++ ML A + + R G S N LL+ DK +
Sbjct: 255 LVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMV 314
Query: 166 -EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E++ GF D ++Y ++ + + K L E M ++G+ NV Y LI +E
Sbjct: 315 KEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
A+KL D+M + L + Y +++D CK G VDKA+ + M + +
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME-IQDSGFRPDKMTYG 180
+++A E+++ + R G P + L+ L ++ D E+ E I+ + + + Y
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
+ K G + K L M+K G P++ YNVL+ + AE + EM +
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ +YN L+ +C+V DK +N
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNF 312
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
+S M+ A +++ +R N + LV +F+ ++ +++ GF
Sbjct: 21 KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPF 80
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
TY + + K+ + LL M G P+++ +NV + LC+E ++G A + F M
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+R V+Y LI+G + G+V A + M + V
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGV 180
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
L V + L S C++ + +A L + + G P L + N+LL D + +
Sbjct: 218 LSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV 277
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIE-LLESMTKRGIRPNVFIYNVLIGGLC 222
E+ SG + D +Y + ++ ++ +K +++ M RG +V Y+ LI C
Sbjct: 278 MAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFC 336
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ A +LF+EM ++ +V + VTY SLI + + G A L ++M
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 5/175 (2%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
V+ DLL C E+K+ + +++R G+ P + S +L+ L + +E++
Sbjct: 119 VYLDLL---CRENKVGFAVQTFFCMVQR-GREPDVVSYTILINGLFRAGKVTDAVEIWNA 174
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELL-ESMTKRGIRPNVFIYNVLIGGLCKER 225
+ SG PD V V+ E++ E + ++ + +YN LI G CK
Sbjct: 175 MIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
RI AE L M K VTYN L++ Y + +A + M + ++++
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLD 289
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 120 KMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTY 179
K+L + TEL G P +L L DK +F ++ + PD ++Y
Sbjct: 381 KLLDQMTEL-------GLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 180 GKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYK 239
+ + G V + I+L E M + P+ + +IGGL + +++ A K++D+M
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Query: 240 RKLVGSTVTYNSLIDGYCKV 259
+ ++LI C +
Sbjct: 494 KGFTLDRDVSDTLIKASCSM 513
>AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22768974-22771274 REVERSE
Length = 766
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 111 LLFSVCCESKMLSEATELYHLIR----RDGKFPALGSL--NMLLRSLVDFKQFDKVIELF 164
+L + C+S+ + EA E++ +R DG S+ N L+ L + + EL
Sbjct: 334 ILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 165 MEIQ-DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
+ ++ + P+ +TY + + G + E++ M + I+PNV N ++GG+C+
Sbjct: 394 VRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ A F +M K + G+ VTY +LI C V V+KA E+M
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L CC + +A Y + G P L+ L ++ I + ++++ G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
F D + Y + + K E+L M K G +P+ YN LI K + E
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
++ ++M + L + TY ++ID YC VGE+D+A L + M
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + L A E+ ++ D P + ++N ++ + + + FM+++ G + +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + A + +V K + E M + G P+ IY LI GLC+ RR DA ++ ++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ + + YN LI +C +K + + M+KE
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKE 575
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
L L+ ++L + C+ + E+ + ++GK P + N L+ K F+ V +
Sbjct: 544 LDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG-IRPNVFIYNVLIGGLC 222
++++ G P TYG + A +G++++ ++L + M + PN IYN+LI
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTV-TYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
K G A L +EM K K+V V TYN+L + + + L + M +++ E N
Sbjct: 664 KLGNFGQALSLKEEM-KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK------LVG 244
D+++ +L+ M + IRP+V +LI LCK RR+ +A ++F++M ++ +
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
++ +N+LIDG CKVG + +A L RMK E
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLE 399
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQ----DSG--FRPDKMTYGKAVQAAVKLGDV 192
P + +L +L+ +L ++ D+ +E+F +++ D G + D + + + K+G +
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 193 NKGIELLESMT-KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
+ ELL M + PN YN LI G C+ ++ A+++ M + ++ + VT N+
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 252 LIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ G C+ ++ A M+KE V+ N
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 132 IRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ-DSGFRPDKMTYGKAVQAAVKLG 190
+R DG P + + ++ + + D+ ++LF ++ S P+ + Y + A KLG
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
+ + + L E M + +RPNV YN L L ++ + KL DEM ++ + +T
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITME 726
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENV 277
L++ ++ D+ LR+ M+ +V
Sbjct: 727 ILME---RLSGSDELVKLRKFMQGYSV 750
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
D L C ++ A E+ R +G ++ +LN + L++ + D+ +++ E+
Sbjct: 152 DSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDS 211
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G+ + T+ + + K + + + + M K G+ PNV +N++I G CK +
Sbjct: 212 LGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRF 271
Query: 230 AEKLFDEMYKRK---LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A +L +M + + VTYNS+I+G+CK G +D A +R M K V+ N
Sbjct: 272 ALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G + + N+++ S + + + +F + G P+ +++ + A K GD+
Sbjct: 213 GYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFA 272
Query: 196 IELLESM---TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSL 252
++LL M + + PN YN +I G CK R+ AE++ +M K + + TY +L
Sbjct: 273 LQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGAL 332
Query: 253 IDGYCKVGEVDKAFNLRERMKKENVEMN 280
+D Y + G D+A L + M + + +N
Sbjct: 333 VDAYGRAGSSDEALRLCDEMTSKGLVVN 360
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 4/176 (2%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF--M 165
F+ +++S C ESK+ EA +++ + + G +P + S NM++ ++L M
Sbjct: 221 FNLVIYSFCKESKLF-EALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKM 279
Query: 166 EIQDSGF-RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
+ F P+ +TY + K G ++ + M K G+ N Y L+ +
Sbjct: 280 GMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRA 339
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+A +L DEM + LV +TV YNS++ G+++ A ++ M +N++++
Sbjct: 340 GSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQID 395
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + + EA E I + N L+ V K+ ++ + G D
Sbjct: 407 CRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDA 466
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+++G + +K G + + +E+ + M K N+ IYN ++ GL K G AE + +
Sbjct: 467 ISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNA 526
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M + +V TYN+L++ K G V++A ++ +M+K++ E
Sbjct: 527 MEIKDIV----TYNTLLNESLKTGNVEEADDILSKMQKQDGE 564
>AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:493683-495158 FORWARD
Length = 491
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 33/193 (17%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLL----------------------- 148
L C+ K +++A +YH ++ + P L + N+LL
Sbjct: 186 LLRTLCQEKSMTDARNVYHSLKHQFQ-PDLQTFNILLSGWKSSEEAEAFFEEMKGKGLKP 244
Query: 149 -----RSLVDF----KQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELL 199
SL+D ++ +K +L ++++ PD +TY + +G +K E+L
Sbjct: 245 DVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVL 304
Query: 200 ESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKV 259
+ M + G P+V YN I C RR+GDA+KL DEM K+ L + TYN
Sbjct: 305 KEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLA 364
Query: 260 GEVDKAFNLRERM 272
++ +++ L RM
Sbjct: 365 NDLGRSWELYVRM 377
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L V C+ + + +A +L +R + + P + + ++ L Q DK E+ E+++ G
Sbjct: 252 LIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYG 311
Query: 172 FRPDKMTYGKAVQ---AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
PD Y A++ A +LGD +K L++ M K+G+ PN YN+ L +G
Sbjct: 312 CYPDVAAYNAAIRNFCIARRLGDADK---LVDEMVKKGLSPNATTYNLFFRVLSLANDLG 368
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ +L+ M + + +T + LI + + +VD A L E M
Sbjct: 369 RSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N LLR+L K ++ ++ F+PD T+ + + E M
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSG---WKSSEEAEAFFEEMK 238
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
+G++P+V YN LI CK+R I A KL D+M + + +TY ++I G +G+ D
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 264 KAFNLRERMKK 274
KA + + MK+
Sbjct: 299 KAREVLKEMKE 309
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V + L S C + EA ++ + G P L + + L+ + ++ +KV +L
Sbjct: 247 IVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLG 306
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+ G PD +Y ++A K G + + + + M G PN Y+VL+ +
Sbjct: 307 EMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSG 366
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
R D +LF EM TYN LI+ + + G + L M +EN+E
Sbjct: 367 RYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
L+ +R +G P + + N LL + D+ +F + D G PD TY V+
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
KL + K +LL M G P++ YNVL+ K I +A +F +M +
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
TY+ L++ + + G D L MK N +
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L +S + EA ++H ++ G P + ++LL ++D V +LF+E++
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
S PD TY ++ + G + + L M + I P++ Y +I K D
Sbjct: 381 SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHED 440
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
A K+ M +V S+ Y +I+ + + ++A
Sbjct: 441 ARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 157 FDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNV 216
++ ++ LF E++ G +PD +TY + A G ++ + +M GI P++ Y+
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 217 LIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
L+ K RR+ L EM + +YN L++ Y K G + +A + +M+
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 277 VEMN 280
N
Sbjct: 348 CTPN 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 3/164 (1%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
++ S+ +L + E++ + G ++ S L+ + +++ +EL +++
Sbjct: 146 IMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE 205
Query: 171 GFRPDKMTYGKAVQAAVKLG-DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
P +TY + A + G D + L M GI+P++ YN L+ C R +GD
Sbjct: 206 KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRGLGD 264
Query: 230 -AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
AE +F M +V TY+ L++ + K+ ++K +L M
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM 308
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 190 GDVNKGIELLESMTKR-GIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVT 248
GD + + L + M ++ +PN IY ++I L +E + ++FDEM + + S +
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 249 YNSLIDGYCKVGEVDKAFNLRERMKKENV 277
Y +LI+ Y + G + + L +RMK E +
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKI 207
>AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7624178-7626058 FORWARD
Length = 626
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V++ LL ++C K+ + + + K P + N+L+ + + ++ + + L
Sbjct: 218 VVYNTLLHALCKNGKVGRARSLMSEM-----KEPNDVTFNILISAYCNEQKLIQSMVLLE 272
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ GF PD +T K ++ G V++ +E+LE + +G + +V N L+ G C
Sbjct: 273 KCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALG 332
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ A++ F EM ++ + + TYN LI GYC VG +D A + MK + + N
Sbjct: 333 KMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWN 387
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 43/207 (20%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPAL----GSLNMLLRSLVDFKQFDKVIELFM 165
D + + + K S A E + R FP + L L F++FD V +L
Sbjct: 44 DHIVRLILDQKSASGALETF---RWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLD 100
Query: 166 EIQDS-GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRP--------------- 209
E+ DS G PD + ++ + + + I +++ ++K GI+P
Sbjct: 101 EMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKE 160
Query: 210 --------------------NVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTY 249
+V+ Y +L+ GL RIGD KL M + + V Y
Sbjct: 161 DIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVY 220
Query: 250 NSLIDGYCKVGEVDKAFNLRERMKKEN 276
N+L+ CK G+V +A +L MK+ N
Sbjct: 221 NTLLHALCKNGKVGRARSLMSEMKEPN 247
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
L L++ + FP + L SL + D + + ++ G P + +
Sbjct: 445 LEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYS 504
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
+ G + + +EL+ M RG P +N +I G CK+ ++ + K ++M +R V T
Sbjct: 505 QHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTE 564
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+YN L++ C G++ KA+ L RM ++++
Sbjct: 565 SYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L S C + L ++ L G P + ++ ++ L + + + +E+ ++
Sbjct: 252 NILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVES 311
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G + D + V+ LG + M ++G PNV YN+LI G C +
Sbjct: 312 KGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDS 371
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
A F++M + + T+N+LI G G D + E M+ +
Sbjct: 372 ALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSD 418
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
CE + + Y + +G P++ + L+ + ++ +EL ++ G+ P
Sbjct: 469 CEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRS 528
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
T+ + K V GI+ +E M +RG P+ YN L+ LC + I A LF
Sbjct: 529 STFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSR 588
Query: 237 MYKRKLVGSTVTYNSLI 253
M ++ +V ++SL+
Sbjct: 589 MVEKSIVPDPSMWSSLM 605
>AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6951349-6952845 REVERSE
Length = 498
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDS-GFRPDKMTYGKAVQAAVKLGDVNKGIE 197
P + N ++ S + + V ++ E+++ G P+ +Y ++A G +++ +
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 198 LLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYC 257
+ E M RG+ ++ YN +IGGLC + A++LF +M + + + +TY L++GYC
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 258 KVGEVDKAFNLRERMKKENVEMN 280
K G+VD + MK++ E +
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEAD 385
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L C ++SEA +++ ++ G + + N ++ L + K ELF ++
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGL 344
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER---R 226
G +TY V K GDV+ G+ + M ++G + L+ GLC +R R
Sbjct: 345 KGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQR 404
Query: 227 IGDAEKLF-DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ +A + D + + S Y L+ C+ G++D+A N++ M
Sbjct: 405 VVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEM 451
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N + V + ++ + LF+E+Q S RPD+ T+ V AA L V G E + K
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK 583
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
RG+ N +I N L+ K DA K FD R + V +NS+I Y GE K
Sbjct: 584 RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDV----VCWNSVISSYANHGEGKK 639
Query: 265 AFNLRERMKKENVEMN 280
A + E+M E +E N
Sbjct: 640 ALQMLEKMMSEGIEPN 655
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
+A Y ++ G P + + N ++R L D +V + E++ G RPD TY +
Sbjct: 731 KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
K+G++ + + M G+ P YNVLI ++ A +L EM KR +
Sbjct: 791 SGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVS 850
Query: 244 GSTVTYNSLIDGYCKV 259
+T TY ++I G CK+
Sbjct: 851 PNTSTYCTMISGLCKL 866
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ FS ++ +C K+L E L + +P + L+ SL + + L+
Sbjct: 260 VTFSSIINRLCKGGKVL-EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 318
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ G D + Y + K GD+ + + + + + PNV Y L+ GLCK
Sbjct: 319 QMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAG 378
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ AE + +M ++ ++ + VTY+S+I+GY K G +++A +L +M+ +NV N
Sbjct: 379 DLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+ L + C+ M +A + + G P + N L+ K + + + +
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
+G P+ TY ++ G + + + L M RG+RP+ F YN LI G K +
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKG 801
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ ++ EM LV T TYN LI + VG++ +A L + M K V N
Sbjct: 802 SMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 158 DKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVL 217
D+V ++ ++ G PD + + K+G ++ I LL + R I + YN +
Sbjct: 111 DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTV 167
Query: 218 IGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
I GLC+ +A + EM K ++ TV+YN+LIDG+CKVG +A L + + + N+
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL 227
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 153 DFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVF 212
D ++ +K ++ +E P+ +TY V K GD++ ++ M ++ + PNV
Sbjct: 344 DLREAEKTFKMLLEDNQV---PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 213 IYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
Y+ +I G K+ + +A L +M + +V + TY ++IDG K G+ + A L + M
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 273 KKENVEMN 280
+ VE N
Sbjct: 461 RLIGVEEN 468
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 37/185 (20%)
Query: 130 HLIRRDGKFPALGSLNMLLRSLV--DFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
+ +R + LN++ +++ + + E + ++ SGF PD +T+ +
Sbjct: 211 NFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLC 270
Query: 188 KLGDVNKG-----------------------------------IELLESMTKRGIRPNVF 212
K G V +G + L M RGI ++
Sbjct: 271 KGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLV 330
Query: 213 IYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+Y VL+ GL K + +AEK F + + V + VTY +L+DG CK G++ A + +M
Sbjct: 331 VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM 390
Query: 273 KKENV 277
+++V
Sbjct: 391 LEKSV 395
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%)
Query: 127 ELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAA 186
+L+ ++ G P+L S N+++ L + + ++ I + ++ P+ TY + +
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 653
Query: 187 VKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGST 246
K + + E++ GI+ + +YN LI LCK A + +M R + T
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDT 713
Query: 247 VTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
VT+NSL+ GY V KA + M + + N
Sbjct: 714 VTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN 747
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ LS A + + P + + + ++ V ++ + L +++D P+
Sbjct: 375 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 434
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TYG + K G IEL + M G+ N +I + L+ L + RI + + L +
Sbjct: 435 FTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKD 494
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGE 261
M + + + Y SLID + K G+
Sbjct: 495 MVSKGVTLDQINYTSLIDVFFKGGD 519
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P + +LN+L+ S + I L +++ D +TY + + G ++
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEA 180
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+ L M K GI P+ YN LI G CK A+ L DE+ + L+ T+ L+
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI----LLSS 236
Query: 256 YCKVGEVDKAF 266
Y + +++A+
Sbjct: 237 YYNLHAIEEAY 247
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A Y +R G P + + N+++ S + +++L+ +++ G +P M+ V
Sbjct: 557 ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVG 616
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
+ G + + I +L M I PN+ Y + + K +R K + + +
Sbjct: 617 MLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKL 676
Query: 245 STVTYNSLIDGYCKVGEVDKA 265
S YN+LI CK+G KA
Sbjct: 677 SRQVYNTLIATLCKLGMTKKA 697
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 3/166 (1%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
L+ +++ + CE+ + EA + + + P L + + L + K+ D + +
Sbjct: 607 SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH 666
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
+ G + + Y + KLG K ++ M RG P+ +N L+ G
Sbjct: 667 ETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVG 726
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG---EVDKAFN 267
+ A + M + + + TYN++I G G EVDK +
Sbjct: 727 SHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N+L+ ++ F + + +++ G PD T+ + + K GD ++L + M
Sbjct: 541 SYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM 599
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
GI+P++ N+++G LC+ ++ +A + ++M ++ + TY +D K
Sbjct: 600 KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRA 659
Query: 263 DKAFNLRERMKKENVEMN 280
D F E + ++++
Sbjct: 660 DAIFKTHETLLSYGIKLS 677
>AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:679487-681904 FORWARD
Length = 805
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + N L+ L F + + ++ E++ SG PD TY +Q K ++ + +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M G P+ +YN L+ G K R++ +A +LF++M + + S TYN LIDG +
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 259 VGEVDKAFNLRERMKKEN 276
G + F L +KK+
Sbjct: 407 NGRAEAGFTLFCDLKKKG 424
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQD------SGFRPDKMTYGKAVQAAVKLGDVNKGI 196
S N+ + + D + LF E+++ S F PD TY + G +
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 197 ELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGY 256
+ + + G P+ Y +LI G CK R+ DA +++ EM V T+ YN L+DG
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGT 369
Query: 257 CKVGEVDKAFNLRERMKKENV 277
K +V +A L E+M +E V
Sbjct: 370 LKARKVTEACQLFEKMVQEGV 390
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L V C +A ++ ++ G P + +L++ + D + ++ E+Q +G
Sbjct: 295 LIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNG 354
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
F PD + Y + +K V + +L E M + G+R + + YN+LI GL + R
Sbjct: 355 FVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGF 414
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
LF ++ K+ +T++ + C+ G+++ A L E M+ ++
Sbjct: 415 TLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVD 463
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L CC+S + +A +Y ++ +G P N LL + ++ + +LF ++
Sbjct: 329 ILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQE 388
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G R TY + + G G L + K+G + ++++ LC+E ++ A
Sbjct: 389 GVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGA 448
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
KL +EM R VT +SL+ G+ K G D L + +++ N+ N
Sbjct: 449 VKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%)
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
D TY +Q K+G + +L+ +TK+G ++ +YN LI L K R+ +A +LF
Sbjct: 664 DIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLF 723
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
D M + V+YN++I+ K G++ +A+ + M
Sbjct: 724 DHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAM 761
>AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25041901-25044849 REVERSE
Length = 982
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 1/162 (0%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
LF C+ +EA L+ + DG + L++ + L++ + +
Sbjct: 243 LFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERS 302
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
F D + + +KLG ++KG + M K+G++ NVF Y+++IG CKE + A
Sbjct: 303 FELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYAL 362
Query: 232 KLFDEMYKRKLVGSTV-TYNSLIDGYCKVGEVDKAFNLRERM 272
+LF + + V Y +LI G+ K G +DKA +L RM
Sbjct: 363 RLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRM 404
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P S N +++ L + + L IQ+ F PD TY V K D +
Sbjct: 507 GCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAA 566
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
++++M + G+RP V IY+ +IG L K+ R+ +AE+ F +M + + + Y +I+
Sbjct: 567 FAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINT 626
Query: 256 YCKVGEVDKAFNLRERMKKE 275
Y + G +D+A L E + K
Sbjct: 627 YARNGRIDEANELVEEVVKH 646
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%)
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
E F ++ +SG +PD++ Y + + G +++ EL+E + K +RP+ F Y VLI G
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 222 CKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
K + + D+M + L + V Y +LI + K G+ +F L M + +++
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%)
Query: 118 ESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM 177
+ ++ + L ++I+ P + + +++ L D + +++ G RP
Sbjct: 524 QENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVA 583
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
Y + + K G V + E M + GI+P+ Y ++I + RI +A +L +E+
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV 643
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
K L S+ TY LI G+ K+G ++K ++M ++ + N
Sbjct: 644 VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPN 686
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
++S ++ S+ + +++ EA E + + G P + +++ + + D+ EL E
Sbjct: 584 IYSSIIGSLGKQGRVV-EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEE 642
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+ RP TY + VK+G + KG + L+ M + G+ PNV +Y LIG K+
Sbjct: 643 VVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGD 702
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
+ LF M + + + Y +L+ G
Sbjct: 703 FKFSFTLFGLMGENDIKHDHIAYITLLSG 731
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
LL+ L DFK+ + L +E+Q SG P+K +Y K +Q + +++++ M
Sbjct: 867 LLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALD 926
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYK--RKLVGST 246
I P + LI LC+E+++ +A LF M + R L+ T
Sbjct: 927 IWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCT 968
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
K+ I PN++++N +I G C R+ +A + M K +V + VTY L+ + + G++
Sbjct: 786 VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDI 845
Query: 263 DKAFNLRE 270
+ A +L E
Sbjct: 846 ESAIDLFE 853
>AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23488884-23489530 REVERSE
Length = 189
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 161 IELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGG 220
+ELF E+ G + +TY +Q + GD + E+ + M G+ P++ YN+L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 221 LCKE---------RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRER 271
LCK ++ D LF + + + + VTY ++I G+CK G ++A+ L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 272 MKKEN 276
MK++
Sbjct: 121 MKEDG 125
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 127 ELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTY------- 179
EL+ + + G + L++ L D E+F E+ G PD MTY
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 180 ---GKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
GK +A V G V G +L S++ +G++PNV Y +I G CK+ +A LF +
Sbjct: 62 CKNGKLEKALVA-GKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
M + + + TYN+LI + + G+ + L + M+
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 157
>AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20791817-20793250 REVERSE
Length = 477
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+LL C E+ + + E + + P S N +L SL+ KQ+ + ++ ++ +
Sbjct: 191 NLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLE 250
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
GF PD +TY + A +LG ++ LL+ M K G P+++ YN+L+ L +
Sbjct: 251 DGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLA 310
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
A L + M + + + + +LIDG + G+++
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE 344
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Query: 122 LSEATELYHLIR---RDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
L + LY L+ +DG P L + N+LL L + + L +++ G P +
Sbjct: 270 LGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIH 329
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
+ + + G + ++ K G P+V Y V+I G + AE++F EM
Sbjct: 330 FTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMT 389
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ + + TYNS+I G+C G+ +A L + M+ N
Sbjct: 390 EKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
++ LL + +K L+ L H+ R G P + L+ L + + E
Sbjct: 294 TYNILLHHLATGNKPLAALNLLNHM-REVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDE 352
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
G PD + Y + + G++ K E+ + MT++G PNVF YN +I G C +
Sbjct: 353 TVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGK 412
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+A L EM R + V Y++L++ G+V +A + + M
Sbjct: 413 FKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
>AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4731056-4733707 REVERSE
Length = 883
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
+L+ F + +LF E +++ D++ Y A A KLG V + IEL MT +G
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
I P+V Y LIGG C + + DA L EM V YN L G G +AF
Sbjct: 427 IAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAF 486
Query: 267 NLRERMKKENVE 278
+ M+ V+
Sbjct: 487 ETLKMMENRGVK 498
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ SEA +L+ R N+ +L + ++ IELF E+ G PD
Sbjct: 372 CQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDV 431
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+ Y + G + +L+ M G P++ IYNVL GGL +A +
Sbjct: 432 INYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKM 491
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
M R + + VT+N +I+G GE+DKA E ++ ++ E
Sbjct: 492 MENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRE 533
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 33/208 (15%)
Query: 101 TPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKV 160
TP +V ++L + + EA E ++ G P + NM++ L+D + DK
Sbjct: 463 TP--DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Query: 161 IELFMEIQDSGFRPDKMTYGKAVQAAVKLGD----------------------------- 191
E F E + R + + K AA L
Sbjct: 521 -EAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKD 579
Query: 192 -VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
++K +LL+ M K G+ P +Y LIG C+ + A + F+ + +K+V TY
Sbjct: 580 YISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYT 639
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENVE 278
+I+ YC++ E +A+ L E MK+ +V+
Sbjct: 640 IMINTYCRLNEPKQAYALFEDMKRRDVK 667
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 9/177 (5%)
Query: 102 PLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVI 161
PL + V+ L S+C E +S+A +L + + G P L+ + K
Sbjct: 561 PLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAR 620
Query: 162 ELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGL 221
E F + PD TY + +L + + L E M +R ++P+V Y+VL+
Sbjct: 621 EFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN-- 678
Query: 222 CKERRIGDAE-KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
D E + EM ++ V Y +I+ YC + ++ K + L + MK+ +
Sbjct: 679 ------SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREI 729
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V+ ++ + C L + L+ ++R P + + +LL++ + L
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN-------LSR 750
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E++ +PD Y + K+GD+ + + + M + G+ P+ Y LI CK
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ +A+ +FD M + + V Y +LI G C+ G V KA L + M ++ ++
Sbjct: 811 YLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C + L A E IR + P + + K +L + G P+K
Sbjct: 543 CAAGCLDHAFE--RFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEK 600
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
YGK + A ++ +V K E E + + I P++F Y ++I C+ A LF++
Sbjct: 601 SMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFED 660
Query: 237 MYKRKLVGSTVTYNSLID 254
M +R + VTY+ L++
Sbjct: 661 MKRRDVKPDVVTYSVLLN 678
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 128 LYHLIRRDGKFPALGSLNML----LRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
L L+ + + P + LN + L + D F L ++D+ DK G A
Sbjct: 240 LSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYF-----LLQPLRDANILVDKSDLGIAY 294
Query: 184 QAAVKLGDVNKGIELLES----MTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYK 239
+ V+ IE ES M K GI P+V++Y+ +I G K I A +F++M K
Sbjct: 295 RKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLK 354
Query: 240 RKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ + V +S++ YC++G +A++L + ++ N+ ++
Sbjct: 355 KRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLD 395
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 4/145 (2%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ EA EL+ + G P + + L+ + +L +E+ +G PD + Y
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
G + E L+ M RG++P +N++I GL + AE ++ + +
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK- 530
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAF 266
S S++ G+C G +D AF
Sbjct: 531 ---SRENDASMVKGFCAAGCLDHAF 552
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
+K E +L + RDG P + N L+ S + + +F ++Q++G PD++T
Sbjct: 372 AKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVT 431
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
Y + K G ++ +++ + M + G+ P+ F Y+V+I L K + A +LF EM
Sbjct: 432 YCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMV 491
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ + VT+N +I + K + A L M+ +
Sbjct: 492 GQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 75/151 (49%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L A L+ + G P L + N+++ + ++ ++L+ ++Q++GF+PDK+TY
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++ G + + + M ++ P+ +Y +L+ K + A + + M +
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
L + T NSL+ + +V + +A+NL + M
Sbjct: 600 LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L + ++ L A ++Y ++ G P + ++++ L LF E+ G
Sbjct: 435 LIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 494
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ +T+ + K + ++L M G +P+ Y++++ L + +AE
Sbjct: 495 CTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAE 554
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+F EM ++ V Y L+D + K G VDKA+ + M + + N
Sbjct: 555 GVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPN 603
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 171 GFRPDKMTYGKAVQA---AVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
GF+ D TY V A + G++NK LL+ M + G +PN YN LI + +
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINK---LLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+A +F++M + VTY +LID + K G +D A ++ +RM++ +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV +++ ++ +++ A +LY ++ G P + ++++ L ++ +F
Sbjct: 499 LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFA 558
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+Q + PD+ YG V K G+V+K + ++M + G+RPNV N L+ +
Sbjct: 559 EMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVH 618
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
R+ +A L M L S TY L+
Sbjct: 619 RMSEAYNLLQSMLALGLHPSLQTYTLLL 646
>AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8017771-8019459 REVERSE
Length = 562
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 135 DGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS-GFRPDKMTYGKAVQAAVKLGDVN 193
+ K L +++ ++R L +++K ++ F+E++ S G + D + + A VK +
Sbjct: 197 ESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIE 256
Query: 194 KGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
E+ + I+P+ +N+LI G CK R+ DA + D M + VTY S +
Sbjct: 257 HAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFV 315
Query: 254 DGYCKVGEVDKAFNLRERMKKENVEMN 280
+ YCK G+ + + E M++ N
Sbjct: 316 EAYCKEGDFRRVNEMLEEMRENGCNPN 342
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + N+L+ ++FD + ++ + F PD +TY V+A K GD + E+
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
LE M + G PNV Y +++ L K +++ +A ++++M + V Y+SLI K
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 259 VGEVDKAFNLRERMKKENV 277
G A + E M + V
Sbjct: 391 TGRFKDAAEIFEDMTNQGV 409
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L C+++ +A + L++ P + + + + F +V E+ E+++
Sbjct: 277 NILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRE 336
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
+G P+ +TY + + K V + + + E M + G P+ Y+ LI L K R D
Sbjct: 337 NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKD 396
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
A ++F++M + + + YN++I + A L +RM+ E E
Sbjct: 397 AAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGE 445
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 38/187 (20%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ E+ +R +G P + + +++ SL KQ + + ++ ++++ G PD
Sbjct: 319 CKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDA 378
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE----------RR 226
Y + K G E+ E MT +G+R +V +YN +I +R
Sbjct: 379 KFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKR 438
Query: 227 IGDAEK----------------------------LFDEMYKRKLVGSTVTYNSLIDGYCK 258
+ D E L M K + TY LI G C
Sbjct: 439 MEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCM 498
Query: 259 VGEVDKA 265
G+V++A
Sbjct: 499 SGKVEEA 505
>AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEE40 (maternal
effect embryo arrest 40) (TAIR:AT3G53700.1); Has 16848
Blast hits to 5324 proteins in 149 species: Archae - 2;
Bacteria - 6; Metazoa - 176; Fungi - 119; Plants -
16112; Viruses - 0; Other Eukaryotes - 433 (source: NCBI
BLink). | chr1:5760793-5762619 FORWARD
Length = 608
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 77/152 (50%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ +CC + +SEA ++ L+ G ++ +ML+ + K ++LF ++ G
Sbjct: 218 ILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIG 277
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
P+ +TY ++ V LG V++ +L + G+ P++ + N++I + R +A
Sbjct: 278 CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEAR 337
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
K+F + KRKLV T+ S++ C G+ D
Sbjct: 338 KVFTSLEKRKLVPDQYTFASILSSLCLSGKFD 369
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 60/107 (56%)
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
GF P++ +G+ ++ + G V++ +++ M GI +V ++++L+ G + A
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
LF++M + + VTY SLI G+ +G VD+AF + +++ E +
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGL 313
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 114 SVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFR 173
S C A ++Y +I ++ K + ++ SL++ +++ + LF +
Sbjct: 427 SALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYP 486
Query: 174 PDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKL 233
D ++Y A++ V+ + + L M + GI PN Y +I GLCKE+ K+
Sbjct: 487 LDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKI 546
Query: 234 FDE 236
E
Sbjct: 547 LRE 549
>AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2733788-2735467 REVERSE
Length = 559
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ LL S+C + E E+ +++ + P + + N+L+ L + + I+ F
Sbjct: 315 VTYNTLLHSLC-SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFY 373
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ + PD +TY + A K G V+ IELL + P + YN +I GL K+
Sbjct: 374 QMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKG 433
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+ A +L+ +M + +T SLI G+C+ V++A
Sbjct: 434 LMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEA 473
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
++ ++L + C++++LS A + ++ + P + + N +L ++ D IEL
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++++ P +TY + K G + K +EL M GI P+ LI G C+
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ +A ++ E R TY +I G CK E++ A + E M
Sbjct: 469 LVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIM 515
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C L E + I G + N LL SL + +D+V E+ + + + P
Sbjct: 290 CRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTV 349
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY + K +++ I+ M ++ P++ YN ++G + KE + DA +L
Sbjct: 350 ITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGL 409
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ +TYNS+IDG K G + KA L +M
Sbjct: 410 LKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM 445
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 102 PLLQLVFSDLLFSVC--CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
P + ++ L+ VC C S + A E+ + +G +P + + N L+ ++
Sbjct: 241 PPFMITYTVLVELVCRYCGS---ARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEE 297
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
V + I G + +TY + + ++ E+L M + P V YN+LI
Sbjct: 298 VASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILIN 357
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
GLCK R + A F +M ++K + VTYN+++ K G VD A L +K
Sbjct: 358 GLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK 411
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Query: 109 SDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
+++L ++C K L++A +L ++ R + P S + L+R L Q DK + + +
Sbjct: 108 NEILHNLCSNGK-LTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMV 166
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
SG PD +TY + K G + + LLE M+ G P+V YN +I +
Sbjct: 167 MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
A + + + + +TY L++ C+ +A + E M E
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVE 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 69/142 (48%)
Query: 134 RDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVN 193
++G P + + +L+ + + + IE+ ++ G PD +TY V + G++
Sbjct: 237 QNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLE 296
Query: 194 KGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
+ +++ + G+ N YN L+ LC + E++ + MY+ + +TYN LI
Sbjct: 297 EVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILI 356
Query: 254 DGYCKVGEVDKAFNLRERMKKE 275
+G CK + +A + +M ++
Sbjct: 357 NGLCKARLLSRAIDFFYQMLEQ 378
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + A L + G P + + N ++R + D+ ++ I + + +G P
Sbjct: 185 CKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFM 244
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY V+ + + IE+LE M G P++ YN L+ C+ + + +
Sbjct: 245 ITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQH 304
Query: 237 MYKRKLVGSTVTYNSLIDGYCK---VGEVDKAFNL 268
+ L +TVTYN+L+ C EV++ N+
Sbjct: 305 ILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNI 339
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%)
Query: 121 MLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYG 180
M+ +A EL L++ P L + N ++ L K +EL+ ++ D+G PD +T
Sbjct: 399 MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRR 458
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
+ + V + ++L+ + RG Y ++I GLCK++ I A ++ + M
Sbjct: 459 SLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTG 518
Query: 241 KLVGSTVTYNSLIDGYCKVG 260
Y +++ G ++G
Sbjct: 519 GCKPDETIYTAIVKGVEEMG 538
>AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19896027-19897442 FORWARD
Length = 471
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYH-LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
+ F L+ +C +S+ + EA ++ H +++ G P + L+++L + +L
Sbjct: 188 VTFGTLIHGLCKDSR-VKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK 246
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E + + D Y + + +K G N+ +LE M+++G +P+ YNVLI G C E
Sbjct: 247 DEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVE 306
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
A ++ DEM ++ L ++YN ++ + ++ + ++A L E M +
Sbjct: 307 NDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPR 356
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
+ +K+ E I + G +PD TY + + G + ++L + M K+ ++P +
Sbjct: 133 ELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFG 191
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV-TYNSLIDGYCKVGEVDKAFNLRERMKK 274
LI GLCK+ R+ +A K+ +M K V TV Y SLI C++GE+ AF L++ +
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 275 ENVEMN 280
++++
Sbjct: 252 GKIKVD 257
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 69/128 (53%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
+ L+ SL+ + ++V + E+ + G +PD +TY + D +L+ M +
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
+G++P+V YN+++G + ++ +A LF++M +R T++Y + DG C+ + ++
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEE 381
Query: 265 AFNLRERM 272
A + + M
Sbjct: 382 AAVILDEM 389
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
K G++ K E L S+ + G +P+ YN+LI G + DA KLFDEM K+K+ + V
Sbjct: 130 KCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMKK 274
T+ +LI G CK V +A ++ M K
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLK 215
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 36/170 (21%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + N+L+ FD ++LF E+ +P +T+G + K V + +++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 199 LESMTK-RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK----------LVGS-- 245
M K G+RP V IY LI LC+ + A KL DE Y+ K L+ S
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 246 -----------------------TVTYNSLIDGYCKVGEVDKAFNLRERM 272
TVTYN LI+G+C + + A + + M
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM 319
>AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8947426-8949424 FORWARD
Length = 574
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 125 ATELYHLIRRDGKF---PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
++EL L+ +G P + + N+L+++ K+ ++ E+ ++++ G RPD +TY
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 182 AVQAAVKLGD-VNKGIELLESMT-KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYK 239
V+ G+ V E++E M K +PN +++GG C+E R+ D + M +
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 240 RKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++ + V +NSLI+G+ +V + D + MK+ NV+ +
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKAD 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L +V E EA ++ + G P+L S LL ++ KQ+ + + E++ SG
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
+ D + + + A + G++ ++ L M + G+ P YN LI G + +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 232 KLFDEMYKRKL--VGSTV-TYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+L D M + VG + T+N L+ +CK +V++A+ + ++M++ V
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGV 219
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 157 FDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNV 216
+K ++F E+ +G +PD Y + V+ + K ELLE++ RPNV I+
Sbjct: 346 MEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTT 404
Query: 217 LIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+I G C + DA ++F++M K + + T+ +L+ GY +V + KA + + M+
Sbjct: 405 VISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMR 461
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N L+ V+ D + E+ +++ + D +TY + A G + K ++ + M
Sbjct: 298 FNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 357
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
K G++P+ Y++L G + + AE+L + + + V + ++I G+C G +D
Sbjct: 358 KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMD 416
Query: 264 KAFNLRERMKKENVEMN 280
A + +M K V N
Sbjct: 417 DAMRVFNKMCKFGVSPN 433
>AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19214445-19215878 REVERSE
Length = 477
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 174 PDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKL 233
D + Y ++ GD+N L++ M G+ P+V Y +I G C +I DA +L
Sbjct: 163 ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 234 FDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
EM K V ++VTY+ +++G CK G++++A L M+KE+
Sbjct: 223 AKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKED 265
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G +P + + ++ + + D L E+ + +TY + ++ K GD+ +
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 196 IELLESMTKRG----IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
+ELL M K I PN Y ++I C++RR+ +A + D M R + + VT
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 252 LIDGYCKVGEVDKAFN 267
LI G + E KA +
Sbjct: 315 LIQGVLENDEDVKALS 330
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 16/172 (9%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALG------SLNMLLRSLVDFKQFDKVIELF 164
++ ++C ++ + EA + KFP + N+++R D + L
Sbjct: 135 IVLTLCNQANLADEALWVLR------KFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E+ G PD +TY + G ++ L + M+K N Y+ ++ G+CK
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKS 248
Query: 225 RRIGDAEKLFDEMYKRKLVG----STVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ A +L EM K G + VTY +I +C+ V++A + +RM
Sbjct: 249 GDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRM 300
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 127 ELYHLIRRDGK-FPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQA 185
E+Y + +G FP + + L+ S + D I LF E++D+ +P + Y +
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 186 AVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGS 245
K+G V K ++L E M + G P V+ Y LI GL K R+ +A + +M + L
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 246 TVTYNSLIDGYCKVGEVDKAFNLRERM 272
V N+L++ KVG V++ N+ M
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEM 364
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG-FRPDKM 177
+KM+S+A +++ + P + N ++ L+ Q +KV E++ E+ + G PD +
Sbjct: 175 AKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTI 234
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
TY + + KLG + I L + M ++P IY L+G K ++ A LF+EM
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ + TY LI G K G VD+A+ + M ++ +
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
LSEA +L++ ++ G P + + N L+ +V ++ L +++++G R D ++
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ + G + IE+ E++ GI+P+ YN L+G +A ++ EM +
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Query: 242 LVGSTVTYNSLIDGYCKVGEVD 263
+TY+S++D VG VD
Sbjct: 615 FEYDAITYSSILDA---VGNVD 633
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ +A +L+ ++R G P + + L++ L + D+ + ++ G PD +
Sbjct: 284 VEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNN 343
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER-RIGDAEKLFDEMYKR 240
+ K+G V + + M P V YN +I L + + + + FD+M
Sbjct: 344 LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ S TY+ LIDGYCK V+KA L E M
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 79/168 (47%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L C++ + +A L + G P + L+ +L K+++ ELF E++++
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
Y ++ K G +++ ++L M +G P+V+ YN L+ G+ K I +A
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEA 533
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
L +M + ++N +++G+ + G +A + E +K ++
Sbjct: 534 NSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIK 581
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
+ + ++LF E+++ G PD Y + VK G +N+ LL M + G R ++ +N
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHN 553
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+++ G + A ++F+ + + VTYN+L+ + G ++A + MK +
Sbjct: 554 IILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Query: 276 NVE 278
E
Sbjct: 614 GFE 616
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Query: 101 TPLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFK-QFDK 159
TP +VF + L ++ + + E T ++ + P + S N ++++L + K +
Sbjct: 335 TP--DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSE 392
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
V F +++ P + TY + K V K + LLE M ++G P Y LI
Sbjct: 393 VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
L K +R A +LF E+ + S+ Y +I + K G++ +A +L MK +
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 118 ESKM-LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
ESK +SE + + ++ D P+ + ++L+ + +K + L E+ + GF P
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
Y + A K EL + + + + +Y V+I K ++ +A LF+E
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
M + YN+L+ G K G +++A +L +M++
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542
>AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217) |
chr1:29900617-29903127 FORWARD
Length = 836
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+L+ +S L A +L+ ++ P+ + L+ S+ + D ++++ME+Q
Sbjct: 317 ELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQG 376
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G RP + + + K G ++ + L + M K G RPN +Y ++I K ++
Sbjct: 377 FGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEV 436
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
A +F +M K + + TY+ L++ + G+VD A + M
Sbjct: 437 AMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
K E++ ++ + D TY + + K G ++ +L + M +R +RP+ +++ L+
Sbjct: 296 KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV 355
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ K R+ + K++ EM S + SLID Y K G++D A L + MKK
Sbjct: 356 DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFR 415
Query: 279 MN 280
N
Sbjct: 416 PN 417
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L A L+ +++ G P G M++ S + + + +F +++ +GF P TY
Sbjct: 399 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++ G V+ +++ SMT G+RP + Y L+ L +R + A K+ EM K
Sbjct: 459 LLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM---K 515
Query: 242 LVGSTVTY--NSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+G +V + ++ Y K VD A M ++ N
Sbjct: 516 AMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTN 556
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%)
Query: 140 ALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELL 199
+ + N +++ L ++ + F + Q+SG + D TY + + G K E+
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 200 ESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKV 259
ESM K + Y ++I L K R+ A KLF +M +RKL S ++SL+D K
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 260 GEVDKAFNLRERMK 273
G +D + + M+
Sbjct: 362 GRLDTSMKVYMEMQ 375
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 71/151 (47%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
+A E+Y + + + +++ SL + D +LF ++++ RP + V
Sbjct: 296 KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV 355
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
+ K G ++ +++ M G RP+ ++ LI K ++ A +L+DEM K
Sbjct: 356 DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFR 415
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ Y +I+ + K G+++ A + + M+K
Sbjct: 416 PNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
>AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G09900.1); Has 18740 Blast hits to 5421
proteins in 159 species: Archae - 3; Bacteria - 12;
Metazoa - 272; Fungi - 258; Plants - 17650; Viruses - 2;
Other Eukaryotes - 543 (source: NCBI BLink). |
chr2:15195663-15197156 FORWARD
Length = 497
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 80/154 (51%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+ +A Y + ++ P + + N+L+ +FD ++LF E+++ G P+ +++
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
++ + G + +G+++ M + G R + +L+ GLC+E R+ DA L ++ ++
Sbjct: 269 LIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKR 328
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
++ S Y SL++ C + +A + E + K+
Sbjct: 329 VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKK 362
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 4/171 (2%)
Query: 100 STPLLQLVFSDLLFSVCCESKMLSEATELYHLIRR--DGKFPALGSLNMLLRSLVDFKQF 157
S P L+ +F + + C KM A + ++R DGK P +G N ++ V
Sbjct: 152 SCPELEPIFRSAIDAYCRARKM-DYALLAFDTMKRLIDGK-PNVGVYNTVVNGYVKSGDM 209
Query: 158 DKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVL 217
DK + + + +PD T+ + + + ++L M ++G PNV +N L
Sbjct: 210 DKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTL 269
Query: 218 IGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
I G +I + K+ EM + S T L+DG C+ G VD A L
Sbjct: 270 IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGL 320
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK 232
+P+ Y V VK GD++K + + M K +P+V +N+LI G C+ + A
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 233 LFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
LF EM ++ + V++N+LI G+ G++++ + M
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEM 289
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 78/168 (46%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L + C S A +L+ ++ G P + S N L+R + + ++ +++ E+ +
Sbjct: 232 NILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIE 291
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G R + T V + G V+ L+ + + + P+ F Y L+ LC E +
Sbjct: 292 LGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVR 351
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
A ++ +E++K+ + +L++G K G +KA E+M +
Sbjct: 352 AMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 7/160 (4%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
+ L+ +C E+K + A E+ + + G+ P + L+ L + +K ++
Sbjct: 336 YGSLVEKLCGENKAV-RAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKM 394
Query: 168 QDSGFRPDKMTYG---KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++G PD +T+ + + ++ D N+ + LL S +G P+ Y+VL+ G KE
Sbjct: 395 MNAGILPDSVTFNLLLRDLCSSDHSTDANR-LRLLAS--SKGYEPDETTYHVLVSGFTKE 451
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
R + E L +EM + ++ TYN L+DG G+ +
Sbjct: 452 GRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 208 RPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFN 267
+PNV +YN ++ G K + A + + M K + T+N LI+GYC+ + D A +
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 268 LRERMKKENVEMN 280
L MK++ E N
Sbjct: 250 LFREMKEKGCEPN 262
>AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:24737719-24739353 FORWARD
Length = 544
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%)
Query: 115 VCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRP 174
VCCE + EA L + G P + N L+ F +K +E + G P
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMP 407
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
+ + V++ K+ +VN+ E+L +G P+ Y+ LI G + I A KLF
Sbjct: 408 SCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLF 467
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
EM RK+ + SLI G C G+V+ + MKK +E N
Sbjct: 468 YEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPN 513
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKG 195
G P+ + N +++S+ + ++ E+ + D GF PD+ TY ++ ++ D+++
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 196 IELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDG 255
++L M R + P ++ LI GLC ++ EK M KR + + Y++LI
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKA 523
Query: 256 YCKVGE---VDKAFN 267
+ K+G+ D+ +N
Sbjct: 524 FQKIGDKTNADRVYN 538
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
++ V C+ L E +L I P++ L+ +++ + ++ + L +
Sbjct: 239 IMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMK 298
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
D + Y V A K GD+ ++ + M +RG N F+Y V + C++ + +A
Sbjct: 299 NMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEA 358
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
E+L EM + + T+N LI G+ + G +K E M
Sbjct: 359 ERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVM 400
>AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26805651-26807183 REVERSE
Length = 510
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ +S+ + +A +++ +++ P + S +LL +V E+ E++D G
Sbjct: 203 MLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEG 262
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
F PD + YG + A K + I M +R +P+ I+ LI GL E+++ DA
Sbjct: 263 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 322
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ F+ TYN+L+ YC ++ A+ + M+ + V N
Sbjct: 323 EFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V ++ + C++K EA ++ + + P+ L+ L K+ + +E F
Sbjct: 267 VVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFE 326
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ SGF + TY V A + + ++ M +G+ PN Y++++ L + +
Sbjct: 327 RSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQ 386
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
R +A +++ M V TY ++ +C +D A + + MK + V
Sbjct: 387 RSKEAYEVYQTMSCEPTVS---TYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
>AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17160224-17162221 REVERSE
Length = 665
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 105 QLVFS--DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE 162
+LV S ++L S + + L + + G P N +L + + I+
Sbjct: 420 ELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQ 479
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
+F + D+G +P ++YG + A K ++ + M K GI PN++ Y + L
Sbjct: 480 IFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLT 539
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+++ + L EM + + S VT+N++I G + G A+ RMK ENVE N
Sbjct: 540 GQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPN 597
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 71/166 (42%)
Query: 115 VCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRP 174
C ++ + A +++ + +G+ P + S LL +L K +D+ ++ + G P
Sbjct: 467 ACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEP 526
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
+ Y N LL+ M +GI P+V +N +I G + G A + F
Sbjct: 527 NLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWF 586
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
M + + +TY LI+ + A+ L + + E ++++
Sbjct: 587 HRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLS 632
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
I PN+FIYN L+G + R G+AEK+ +M + +V + VTYN+L+ Y + GE KA
Sbjct: 183 IGPNLFIYNSLLGAM---RGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKAL 239
Query: 267 NLRERMKKENVEMN 280
+ + K++ E N
Sbjct: 240 GILDLTKEKGFEPN 253
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G46100.1); Has
11639 Blast hits to 3936 proteins in 180 species: Archae
- 0; Bacteria - 2; Metazoa - 206; Fungi - 141; Plants -
11004; Viruses - 0; Other Eukaryotes - 286 (source: NCBI
BLink). | chr4:573098-577243 REVERSE
Length = 1110
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L +A EL+ R G P S N+L+++ +LF ++ + PD +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+Q + G VN +ELL+ M +G P+ LIGGLC + + +K +EM +
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKG 286
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
N L+ G+C G+V++A ++ E + K
Sbjct: 287 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 319
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Query: 133 RRDGKFPALGSL-NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKL-G 190
R +P G + L++ + K +KV+ F ++ + F P + + V G
Sbjct: 110 HRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRG 169
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
+ K EL +S G+ PN YN+L+ C + A +LF +M +R +V +Y
Sbjct: 170 YLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYK 229
Query: 251 SLIDGYCKVGEVDKAFNLRERM 272
LI G+C+ G+V+ A L + M
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDM 251
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 6/172 (3%)
Query: 102 PLLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQF-DKV 160
PL +F+ L V E+K+ + ++ + P LN +L LV + + K
Sbjct: 116 PLTGEIFT-YLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKA 174
Query: 161 IELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGG 220
ELF + G P+ +Y +QA D++ +L M +R + P+V Y +LI G
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 221 LCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
C++ ++ A +L D+M + V +LI G C G D+ E M
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEM 282
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P+L N +L+SL D K F KV+ LF E++ G PD T +++ +L V +G ++
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
K G+ + ++ N L+G +I K+FDEM +R + V++N LI Y
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDV----VSWNGLISSYVG 124
Query: 259 VGEVDKAFNLRERMKKEN 276
G + A + +RM +E+
Sbjct: 125 NGRFEDAIGVFKRMSQES 142
>AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4857361-4858959 FORWARD
Length = 532
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 157 FDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK-RGIRPNVFIYN 215
+KV++LF ++ PD+ Y V A K V++ L+++M + +GI PNV YN
Sbjct: 278 LNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYN 337
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
LI LCK R+ +A+++FDEM ++ L + TY++ + + GE + F L +M+K
Sbjct: 338 SLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTGE--EVFELLAKMRKM 394
Query: 276 NVE 278
E
Sbjct: 395 GCE 397
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE-LFMEIQDS 170
L S C K +S+A L + F A S N++L + + E ++ME+ +
Sbjct: 198 LLSALCRYKNVSDAGHLIFCNKDKYPFDA-KSFNIVLNGWCNVIGSPREAERVWMEMGNV 256
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G + D ++Y + K G +NK ++L + M K I P+ +YN ++ L K + +A
Sbjct: 257 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 316
Query: 231 EKLFDEMYKRKLV-GSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
L M + K + + VTYNSLI CK + ++A + + M
Sbjct: 317 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEM 359
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 118 ESKMLSEATELYHLIRRD-GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
++ +SEA L + + G P + + N L++ L ++ ++ ++F E+ + G P
Sbjct: 309 KASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTI 368
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY A ++ G+ + ELL M K G P V Y +LI LC+ R + L+DE
Sbjct: 369 RTY-HAFMRILRTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDE 425
Query: 237 MYKRKLVGSTV-TYNSLIDGYCKVGEVDKAFNLRERMK------KENVE 278
M K K VG + +Y +I G G++++A+ + MK ENVE
Sbjct: 426 M-KEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVE 473
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
Query: 140 ALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELL 199
+L S N ++ +LV F ++D ++LF E+Q S F PD T + A LG ++ G
Sbjct: 216 SLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAH 274
Query: 200 ESMTKR---GIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGY 256
+ ++ + +V + N LI CK + AE++F M KR L ++N++I G+
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDL----ASWNAMILGF 330
Query: 257 CKVGEVDKAFNLRERM--KKENVEMN 280
G ++A N +RM K+ENV N
Sbjct: 331 ATHGRAEEAMNFFDRMVDKRENVRPN 356
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 144 LNMLLRSLV-DFKQFDKVIELFMEIQDSG-FRPDKMTYGKAVQAAVKLGDVNKGIELLES 201
N L+R+ D + ++ L+ ++ + G PDK T+ ++A + ++G ++
Sbjct: 117 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 176
Query: 202 MTKRGIRPNVFIYNVLIG--GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKV 259
+ K G +V++ N LI G C + A K+FDEM +R LV ++NS+ID +
Sbjct: 177 IVKHGFGGDVYVNNGLIHLYGSCGCLDL--ARKVFDEMPERSLV----SWNSMIDALVRF 230
Query: 260 GEVDKAFNLRERMKK 274
GE D A L M++
Sbjct: 231 GEYDSALQLFREMQR 245
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
SK +A EL+ + G P + N L++ L K +++++G+ D +
Sbjct: 518 SKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP 577
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
Y + + VKLG +N E+ + M + I P+V +Y VLI + A + M
Sbjct: 578 YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+ + G++V YNSLI Y KVG +D+A
Sbjct: 638 EAGIPGNSVIYNSLIKLYTKVGYLDEA 664
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
++ S V Q + E++ E+ + PD + YG + A G+V + + +E+M + G
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGS--------TVTYNSLIDGYCK 258
I N IYN LI K + +AE ++ RKL+ S T N +I+ Y +
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEAEAIY-----RKLLQSCNKTQYPDVYTSNCMINLYSE 695
Query: 259 VGEVDKAFNLRERMKK 274
V KA + + MK+
Sbjct: 696 RSMVRKAEAIFDSMKQ 711
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Query: 125 ATELYHLIRRDGKFPA-LGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
A E++ + G + + N++LR L ++ V L+ E+ G +P TYG +
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM------ 237
K G + L M+K G++P+ +++ K R AE+ F +
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENK 289
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ S+ TYN++ID Y K G++ +A +RM +E +
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGI 329
>AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16091120-16092454 FORWARD
Length = 444
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P L +++R LV+ + +V+ + +++ PD + Y +Q + D K +L
Sbjct: 240 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 299
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
+ + G+ P+V+ YNV I GLCK+ I A K+ M K + VTYN LI K
Sbjct: 300 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 359
Query: 259 VGEVDKAFNLRERMKKENVEMN 280
G++ +A L + M+ V N
Sbjct: 360 AGDLSRAKTLWKEMETNGVNRN 381
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
E + + ++ D P L ++L+ ++ + + K +LF E+ G PD TY +
Sbjct: 260 EVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYI 319
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
K D+ ++++ SM K G PNV YN+LI L K + A+ L+ EM +
Sbjct: 320 NGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVN 379
Query: 244 GSTVTYNSLIDGYCKVGEV-------DKAFNLRERMKKENVE 278
++ T++ +I Y +V EV ++AFN+ +K +E
Sbjct: 380 RNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIE 421
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 1/161 (0%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
L+ + L + ES + EA L++ ++ +G P + + N+++ SL+ Q D+ ++F+
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++Q SG P+ +++ + V+ G + I L M + G+RPN F V +
Sbjct: 501 QMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLA 560
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTY-NSLIDGYCKVGEVDKA 265
+ + + + S V+ SL+D Y K G+++KA
Sbjct: 561 SLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA 601
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+ N L+ V + ++ I LF +++ G P ++T + A+ +G V +G +
Sbjct: 241 AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA 300
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
G+ + + L+ CK I AE +FD M+++ + VT+N +I GY + G V
Sbjct: 301 IVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV----VTWNLIISGYVQQGLV 356
Query: 263 DKAFNLRERMKKENVE 278
+ A + + M+ E ++
Sbjct: 357 EDAIYMCQLMRLEKLK 372
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N L+ +++ +ELF+E +++ + DK TY A+ + D++ G ELL +
Sbjct: 115 SFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGL 173
Query: 203 -TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
G+ VF+ NVLI K ++ A LFD +R V++NSLI GY +VG
Sbjct: 174 VVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERD----QVSWNSLISGYVRVGA 229
Query: 262 VDKAFNLRERMKKENVEMN 280
++ NL +M ++ + +
Sbjct: 230 AEEPLNLLAKMHRDGLNLT 248
>AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17870064-17871929 REVERSE
Length = 621
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Query: 118 ESKMLSEATELYHLIRRDGKF-PALGSLNMLLRSLVDFKQ--FDKVIELFMEIQDSGFRP 174
+S+M++E +LY + DG F P++ ++LLR L D V + + + +G
Sbjct: 310 KSRMMAETVKLYEYMM-DGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSL 368
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
K Y ++ +G ++ E+ ++M G P+ Y+ L+ GLCK +R+ +A +
Sbjct: 369 SKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVL 428
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
D+M + T+ LI G+CK E+DKA
Sbjct: 429 DQMEAQGCFPDIKTWTILIQGHCKNNELDKAL 460
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 149 RSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIR 208
RSL +FD+ E+ ++++G+ PD +TY + V K + + +L+ M +G
Sbjct: 378 RSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCF 437
Query: 209 PNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA-FN 267
P++ + +LI G CK + A F M ++ + + LIDG+ + + A
Sbjct: 438 PDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIF 497
Query: 268 LRERMKKENVE 278
L E +K NV+
Sbjct: 498 LMEMVKNANVK 508
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV + + +V ++K+ EA L + G P S + LL V+ +F + + +F
Sbjct: 260 LVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFA 319
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E+++ D T + +L V + L S+ K I PNV YN ++ +
Sbjct: 320 EMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE 379
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
G+A LF M ++ + + VTYN++I Y K E +KA NL + M+ +E N
Sbjct: 380 LFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 434
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 104 LQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIEL 163
L L +++ V + M+ EA L+ +R+ P + S N +LR + + F + I L
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 164 FMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
F +Q + +TY ++ K + K L++ M RGI PN Y+ +I K
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGK 447
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
++ A LF ++ + V Y ++I Y +VG + A L +K
Sbjct: 448 AGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK 497
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 36/189 (19%)
Query: 128 LYHLIRRDGKF-PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTY------- 179
L + + K+ P++ + N++LR+++ KQFD LF E++ PD+ TY
Sbjct: 141 LLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSF 200
Query: 180 GKA----------------------------VQAAVKLGDVNKGIELLESMTKRGIRPNV 211
GK ++ + +L D +K I + + + GI P++
Sbjct: 201 GKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDL 260
Query: 212 FIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRER 271
YN +I K + +A L EM + ++ +TV+Y++L+ Y + + +A ++
Sbjct: 261 VAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAE 320
Query: 272 MKKENVEMN 280
MK+ N ++
Sbjct: 321 MKEVNCALD 329
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIE---LFMEIQ 168
L SV E+ EA ++ ++ L + N+++ + Q D V E LF ++
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDV---YGQLDMVKEADRLFWSLR 357
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
P+ ++Y ++ + + I L M ++ I NV YN +I K
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 417
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A L EM R + + +TY+++I + K G++D+A L ++++ VE++
Sbjct: 418 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEID 469
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 133 RRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDV 192
R G +L L R L D+ K I +F ++ SG PD + Y + K
Sbjct: 220 RVSGDLVLYSNLIELSRRLCDY---SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLF 276
Query: 193 NKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSL 252
+ L++ M + G+ PN Y+ L+ + + +A +F EM + T N +
Sbjct: 277 REARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIM 336
Query: 253 IDGYCKVGEVDKAFNLRERMKKENVEMN 280
ID Y ++ V +A L ++K ++E N
Sbjct: 337 IDVYGQLDMVKEADRLFWSLRKMDIEPN 364
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 110 DLLFSVCCESKMLSEATELY-HLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
+ L S SK L EA + + L + G P L + N ++++L D ++ +F E++
Sbjct: 161 NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELE 220
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
+GF PD +++ ++ + +G + + M + + PN+ YN + GL + ++
Sbjct: 221 KNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFT 280
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
DA L D M + TYN+LI Y VD NL E MK
Sbjct: 281 DALNLIDVMKTEGISPDVHTYNALITAY----RVDN--NLEEVMK 319
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%)
Query: 120 KMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTY 179
++ E ++ L++ P + S N +R L K+F + L ++ G PD TY
Sbjct: 242 ELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTY 301
Query: 180 GKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYK 239
+ A ++ + ++ M ++G+ P+ Y +LI LCK+ + A ++ +E K
Sbjct: 302 NALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Query: 240 RKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
KL+ Y +++ G++D+A L
Sbjct: 362 HKLLSRPNMYKPVVERLMGAGKIDEATQL 390
>AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1672161-1673675 FORWARD
Length = 504
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 131 LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG 190
LIR G P L S + + L + + + E+ + ++ GF P YG V+A + G
Sbjct: 290 LIR--GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 191 DVNKGIELL-ESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR-KLVGSTVT 248
+ + + ++ + M + P V +YNVLI GLC + + +A +M K+ V + T
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 249 YNSLIDGYCKVGEVDKAFNLRERM 272
Y +L+DG C+ G+ +A + E M
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEM 431
>AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3913168-3914385 REVERSE
Length = 405
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 111 LLFSVCCESKMLSEATELY-HLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
LLF+ C +K EA +Y + + G P L + N ++R L + + E++
Sbjct: 152 LLFA-CLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMER 210
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
+P ++G + K ++ +++ M + G+ V YN++I LCK ++ +
Sbjct: 211 KWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAE 270
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
A+ L D + ++ ++VTY+ LI G+C +D+A NL E M
Sbjct: 271 AKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVM 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ V CES S + + + R P S +++ ++FD+V ++ + + G
Sbjct: 188 MIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFG 247
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
TY +Q K + L++ + +RPN Y++LI G C E + +A
Sbjct: 248 VHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAM 307
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL-RERMKKENV 277
LF+ M + Y +LI CK G+ + A L RE M+K V
Sbjct: 308 NLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWV 354
>AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22180231-22181652 REVERSE
Length = 473
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
+Y + DG P + + N+LL + + D+ LF E+ GF PD TY +
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI-- 298
Query: 188 KLGDVNK---GIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
LG NK + L M + GI P+V Y LI GL + + + DEM K
Sbjct: 299 -LGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRP 357
Query: 245 STVTYNSLIDGYCKVGEVDKA 265
V Y +I GY GE+DKA
Sbjct: 358 DVVCYTVMITGYVVSGELDKA 378
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+LL C E+ + +A + + P S N +L SL+ KQ+ + ++ ++ +
Sbjct: 188 NLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLE 247
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
GF PD +TY + +LG +++ L + M + G P+ + YN+L+ L K +
Sbjct: 248 DGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLA 307
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
A + M + + S + Y +LIDG + G ++
Sbjct: 308 ALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE 341
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
L+ + RDG P + N+LL L + + +++ G P + Y +
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
+ G++ L+ M K G RP+V Y V+I G + A+++F EM + + +
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
TYNS+I G C GE +A L + M+ N
Sbjct: 396 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
+K L+ T L H+ + G P++ L+ L + E+ +G RPD +
Sbjct: 303 NKPLAALTTLNHM-KEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
Y + V G+++K E+ MT +G PNVF YN +I GLC +A L EM
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 421
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFN-LRERMKK 274
R + V Y++L+ K G++ +A +RE +KK
Sbjct: 422 SRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
>AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675575 FORWARD
Length = 349
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
V +D+ CE+ + EA +L + P + N LL+ L K V E E
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDE 219
Query: 167 IQDS-GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++D +PD +++ + ++ + + L+ + G +P+ F+YN ++ G C
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKA 265
+ +A ++ +M + + +TYN+LI G K G V++A
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKF-PALGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
+ L C+ K L E +R D P L S +L+ ++ + K + + L ++
Sbjct: 198 NFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
++GF+PD Y ++ L ++ + + + M + G+ P+ YN LI GL K R+
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG 260
+A M T TY SL++G C+ G
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 111 LLFSVCCES--KMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
+L S C + +S + +L+ +G P + ++ +RSL + + D+ +L E+
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKR-GIRPNVFIYNVLIGGLCKERRI 227
+ PD TY ++ K D++ E ++ M ++P++ + +LI +C + +
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+A L ++ YN+++ G+C + + +A + ++MK+E VE
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV +L C SK L EA L + G P N +++ + + + ++
Sbjct: 230 LVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYK 289
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
++++ G PD++TY + K G V + L++M G P+ Y L+ G+C++
Sbjct: 290 KMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
>AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30395194-30396921 REVERSE
Length = 540
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 63/115 (54%)
Query: 163 LFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC 222
++ E+ + P+K +Y + K+G++ + L + M KRG+ P + +YN L+ L
Sbjct: 281 IWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLT 340
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+E +A KL ++ + L +VTYNS+I C+ G++D A N+ M EN+
Sbjct: 341 REDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 83/192 (43%), Gaps = 33/192 (17%)
Query: 115 VCCESKM--LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGF 172
+ C SK+ L ++ LY +++ G P + N L+ L FD+ ++L ++ + G
Sbjct: 301 ISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGL 360
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN----------------- 215
+PD +TY ++ + G ++ +L +M + P V ++
Sbjct: 361 KPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQ 420
Query: 216 --------------VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
+++G L K ++ +A K++ EM + ++V + Y + I G G
Sbjct: 421 MKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGW 480
Query: 262 VDKAFNLRERMK 273
++KA + MK
Sbjct: 481 LEKAREIYSEMK 492
>AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G27300.1); Has 11283 Blast hits to 3897
proteins in 129 species: Archae - 1; Bacteria - 2;
Metazoa - 118; Fungi - 74; Plants - 10832; Viruses - 0;
Other Eukaryotes - 256 (source: NCBI BLink). |
chr2:11849789-11851351 REVERSE
Length = 442
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Query: 139 PALGSLNMLLRSL--------VDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLG 190
P + + ++L ++L ++ + V LF ++ DSG PD V+ V
Sbjct: 243 PTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSL 302
Query: 191 DVNKGIELLESMT-KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTY 249
VN + + M+ PN F Y+ LI GLC + R +A +L EM + V + +Y
Sbjct: 303 HVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSY 362
Query: 250 NSLIDGYCKVGEVDKA 265
NSL++ + GE+D A
Sbjct: 363 NSLVNAFALSGEIDDA 378
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 136 GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS-GFRPDKMTYGKAVQAAVKLGDVNK 194
G P + +LN L++ V + + +F ++ P+ TY + G
Sbjct: 283 GIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTIN 342
Query: 195 GIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLID 254
ELL M +G PN YN L+ I DA K EM + V ++Y +L+D
Sbjct: 343 ARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVD 402
Query: 255 GYCKVGEVDKAFNLRERMKKENV 277
C+ G+ D+A L E ++++ +
Sbjct: 403 ESCRKGKYDEATRLLEMLREKQL 425
>AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24672008-24673471 REVERSE
Length = 487
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 7/176 (3%)
Query: 101 TPLLQLVFSDLLFSVC------CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDF 154
TP L F+ LL +C S ++ EA + +R P S N+LL L
Sbjct: 240 TPDL-FCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRT 298
Query: 155 KQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIY 214
++ + ++ +++ SG PD +Y V+ G KG ++++ M +RG RP Y
Sbjct: 299 RRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFY 358
Query: 215 NVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRE 270
LIG LC R+ A +LF++M + + G Y+ LI CK G +K L E
Sbjct: 359 YDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWE 414
>AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);
binding | chr1:3363535-3366276 FORWARD
Length = 913
Score = 65.1 bits (157), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEI-QDSGFRPDKMTYGKAVQAAVKLGDVNKGIE 197
P + + N ++ ++ K++ + I LF + S P+ ++Y + + A G+V++ +E
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 198 LLESMTKRG-IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGY 256
+ + P+ Y L GL + RIGDA L EM + + YN+LI GY
Sbjct: 238 VYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 257 CKVGEVDKAFNLRERMKKE 275
+G+ DKA + +K +
Sbjct: 298 LDLGDFDKAVEFFDELKSK 316
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 124 EATELYHLIRRDGKF---PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM--- 177
EA E Y + D KF P G N+LL + F + D+ LF E+ D+ P+ +
Sbjct: 340 EAMESYRSLL-DKKFRMHPPTG--NVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVN 396
Query: 178 --TYGKAVQAAVKLGDVNKGIELLESM-TKRGIRPNVFIY----NVLIGGLCKERRIGDA 230
T G V K+G+ ++ I + + +K +P V Y N+ + C++ + +A
Sbjct: 397 SDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNI-VTRFCEQGMLTEA 455
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEM 279
E+ F E R L ++ ++ID Y K +D A + +RM N+ +
Sbjct: 456 ERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRV 504
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 141 LGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLE 200
L S N L+ + +K I ++ ++ G +PD +T V + LGD+N+G E E
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE 281
Query: 201 SMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG 260
+ + G+R + + N L+ K I +A ++FD + KR + V++ ++I GY + G
Sbjct: 282 YVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCG 337
Query: 261 EVDKAFNLRERMKKENV 277
+D + L + M++++V
Sbjct: 338 LLDVSRKLFDDMEEKDV 354
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%)
Query: 132 IRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGD 191
I+++G P + S LL S +Q K E+F+ ++ +P+ +TY + A G
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 192 VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
+ + +E+ M + GI+PNV L+ + ++ + + + R + +T YNS
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 368
Query: 252 LIDGYCKVGEVDKAFNLRERMKKENVE 278
I Y E++KA L + M+K+ V+
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKKVK 395
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L+EA E++ + +DG P + S+ LL + K+ V + Q G + Y
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 368
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
A+ + + ++ K I L +SM K+ ++ + + +LI G C+ + +A EM
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 428
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ + Y+S++ Y K G+V +A ++ +MK E
Sbjct: 429 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 465
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L + C S EA E+ + +G P L + N++L + +Q+ K + F ++ +
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESM-TKRG-IRPNVFIYNVLIGGLCKERRIGD 229
RPD T+ + KLG ++ ++L SM KR RP+V + ++ + I +
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+F+ M L + V+YN+L+ Y G A ++ +K+ +
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 254
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 37/212 (17%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV +++ S + S+A + L++ P + N+++ L Q + ++LF
Sbjct: 116 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 166 EIQD--SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC- 222
+++ + RPD +T+ + G++ + E+M G++PN+ YN L+G
Sbjct: 176 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 235
Query: 223 ----------------------------------KERRIGDAEKLFDEMYKRKLVGSTVT 248
+ R+ G A+++F M K + + VT
Sbjct: 236 HGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT 295
Query: 249 YNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
YN+LID Y G + +A + +M+++ ++ N
Sbjct: 296 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 74/155 (47%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
S+ +A E++ ++R++ + P + + N L+ + + +E+F +++ G +P+ ++
Sbjct: 271 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 330
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
+ A + +L + RGI N YN IG + A L+ M
Sbjct: 331 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 390
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
K+K+ +VT+ LI G C++ + +A + + M+
Sbjct: 391 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
Q+ + L ++ + P + TY + A G+ + +E+ + MT G+ P++ +N
Sbjct: 61 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 120
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+++ R+ A F+ M K+ T T+N +I K+G+ +A +L M+++
Sbjct: 121 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 180
Query: 276 NVE 278
E
Sbjct: 181 RAE 183
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
NM++R D+ LF E+Q +PD TY + A + G + L++ M +
Sbjct: 15 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 74
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
I P+ YN LI +A ++ +M + VT+N ++ Y + K
Sbjct: 75 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 134
Query: 265 AFNLRERMKKENV 277
A + E MK V
Sbjct: 135 ALSYFELMKGAKV 147
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N+L+ S + F++VI + + G RPD TY ++A + DV G + S+
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
+ ++++ N LI + R +G A +LFD M++R V++N++I+ Y G
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERD----AVSWNAVINCYASEGMWS 227
Query: 264 KAFNLRERMKKENVEMN 280
+AF L ++M VE++
Sbjct: 228 EAFELFDKMWFSGVEVS 244
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 121 MLSEATELYH--LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
M S+ +L H ++ R + +L + N ++ + ++ L E+ +GF+P+ +T
Sbjct: 324 MYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRG-IRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
+ ++ ++ G E + +R + ++N L+ K +I A+++ D M
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
KR VTY SLIDGY GE A L + M + ++
Sbjct: 444 SKRD----EVTYTSLIDGYGNQGEGGVALALFKEMTRSGIK 480
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
D +T+ + +KLGD+ + EL + + R NV + ++ G + +++ AE LF
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
EM +R +V ++N++IDGY + G +DKA L + M + N+
Sbjct: 133 QEMPERNVV----SWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N ++++LV + D+ + LF + R D +++ V K G V++ L + M
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
+R N+ +N +I G + RI +A++LF M +R ++N++I G+ + E+
Sbjct: 229 PER----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREM 280
Query: 263 DKAFNLRERMKKENV 277
+KA L +RM ++NV
Sbjct: 281 NKACGLFDRMPEKNV 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 110 DLLFSVCCESKMLSEATELYH-LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
+ L C+ ++EA +L+ L RD + + ++ + + ELF +
Sbjct: 50 EWLIGELCKVGKIAEARKLFDGLPERD-----VVTWTHVITGYIKLGDMREARELFDRV- 103
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
DS R + +T+ V ++ ++ L + M +R NV +N +I G + RI
Sbjct: 104 DS--RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRID 157
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
A +LFDEM +R + V++NS++ + G +D+A NL ERM + +V
Sbjct: 158 KALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRRDV 202
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 122 LSEATELYHLI-RRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYG 180
+ EA EL+ + R ++ LRS KQ LF E+ + +++
Sbjct: 93 MREARELFDRVDSRKNVVTWTAMVSGYLRS----KQLSIAEMLFQEMPERNV----VSWN 144
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
+ + G ++K +EL + M +R N+ +N ++ L + RI +A LF+ M +R
Sbjct: 145 TMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR 200
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+V ++ +++DG K G+VD+A L + M + N+
Sbjct: 201 DVV----SWTAMVDGLAKNGKVDEARRLFDCMPERNI 233
>AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21824233 REVERSE
Length = 583
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
E +++Y ++R P + S +L+++ ++ ++ + +F E+ D+G RP Y +
Sbjct: 297 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
A G V + + +SM + I P+++ Y ++ + AEK F +
Sbjct: 357 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ VTY +LI GY K +V+K + E+M+ ++ N
Sbjct: 417 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 453
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L S M+ +A ++ +RRD FP L S +L + V+ + + F I+
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
GF P+ +TYG ++ K DV K +E+ E M GI+ N I ++ + + G
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS 472
Query: 230 AEKLFDEM 237
A + EM
Sbjct: 473 ALGWYKEM 480
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 150 SLVDFK-QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIR 208
SL+ F+ + +V +++ ++Q S +PD ++Y ++A + + + + E M G+R
Sbjct: 287 SLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 346
Query: 209 PNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
P YN+L+ + A+ +F M + ++ +Y +++ Y +++ A
Sbjct: 347 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 406
Query: 269 RERMKKENVEMN 280
+R+K + E N
Sbjct: 407 FKRIKVDGFEPN 418
>AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21823919 REVERSE
Length = 590
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
E +++Y ++R P + S +L+++ ++ ++ + +F E+ D+G RP Y +
Sbjct: 304 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
A G V + + +SM + I P+++ Y ++ + AEK F +
Sbjct: 364 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 423
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ VTY +LI GY K +V+K + E+M+ ++ N
Sbjct: 424 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 460
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
++L S M+ +A ++ +RRD FP L S +L + V+ + + F I+
Sbjct: 360 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 419
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
GF P+ +TYG ++ K DV K +E+ E M GI+ N I ++ + + G
Sbjct: 420 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS 479
Query: 230 AEKLFDEM 237
A + EM
Sbjct: 480 ALGWYKEM 487
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 150 SLVDFK-QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIR 208
SL+ F+ + +V +++ ++Q S +PD ++Y ++A + + + + E M G+R
Sbjct: 294 SLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 353
Query: 209 PNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
P YN+L+ + A+ +F M + ++ +Y +++ Y +++ A
Sbjct: 354 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 413
Query: 269 RERMKKENVEMN 280
+R+K + E N
Sbjct: 414 FKRIKVDGFEPN 425
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%)
Query: 132 IRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGD 191
I+++G P + S LL S +Q K E+F+ ++ +P+ +TY + A G
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Query: 192 VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
+ + +E+ M + GI+PNV L+ + ++ + + + R + +T YNS
Sbjct: 441 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 500
Query: 252 LIDGYCKVGEVDKAFNLRERMKKENVE 278
I Y E++KA L + M+K+ V+
Sbjct: 501 AIGSYINAAELEKAIALYQSMRKKKVK 527
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
L+EA E++ + +DG P + S+ LL + K+ V + Q G + Y
Sbjct: 441 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 500
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
A+ + + ++ K I L +SM K+ ++ + + +LI G C+ + +A EM
Sbjct: 501 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 560
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ + Y+S++ Y K G+V +A ++ +MK E
Sbjct: 561 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 597
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 37/212 (17%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
LV +++ S + S+A + L++ P + N+++ L Q + ++LF
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 166 EIQD--SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLC- 222
+++ + RPD +T+ + G++ + E+M G++PN+ YN L+G
Sbjct: 308 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 367
Query: 223 ----------------------------------KERRIGDAEKLFDEMYKRKLVGSTVT 248
+ R+ G A+++F M K + + VT
Sbjct: 368 HGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT 427
Query: 249 YNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
YN+LID Y G + +A + +M+++ ++ N
Sbjct: 428 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L + C S EA E+ + +G P L + N++L + +Q+ K + F ++ +
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESM-TKRG-IRPNVFIYNVLIGGLCKERRIGD 229
RPD T+ + KLG ++ ++L SM KR RP+V + ++ + I +
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+F+ M L + V+YN+L+ Y G A ++ +K+ +
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 386
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 74/155 (47%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
S+ +A E++ ++R++ + P + + N L+ + + +E+F +++ G +P+ ++
Sbjct: 403 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
+ A + +L + RGI N YN IG + A L+ M
Sbjct: 463 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 522
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
K+K+ +VT+ LI G C++ + +A + + M+
Sbjct: 523 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
Q+ + L ++ + P + TY + A G+ + +E+ + MT G+ P++ +N
Sbjct: 193 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 252
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+++ R+ A F+ M K+ T T+N +I K+G+ +A +L M+++
Sbjct: 253 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 312
Query: 276 NVE 278
E
Sbjct: 313 RAE 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
NM++R D+ LF E+Q +PD TY + A + G + L++ M +
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
I P+ YN LI +A ++ +M + VT+N ++ Y + K
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 265 AFNLRERMKKENV 277
A + E MK V
Sbjct: 267 ALSYFELMKGAKV 279
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N+++ + F D + F + G PD++T+ + K G E+ E+M +
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
RG P YN++I + R D ++L +M + ++ + VT+ +L+D Y K G +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 265 AFNLRERMK 273
A E MK
Sbjct: 568 AIECLEEMK 576
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A E++ + R G P + N+++ S D +++D + L +++ G P+ +T+ V
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
K G N IE LE M G++P+ +YN LI + A F M L
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
S + NSLI+ + + +AF + + MK+ V+
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVK 651
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ S +S EA L+ +R+ G P + N LL+ V + E++ G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD+ TY + A V G +L+ M ++PN F+++ L+ G R G+ +
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF---RDRGEWQ 426
Query: 232 KLFDEMYKRKLVGSTVT---YNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
K F + + K +G YN +ID + K +D A +RM E +E
Sbjct: 427 KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIE 476
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%)
Query: 147 LLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRG 206
LL D ++ K ++ E++ G +PD+ Y + K ++ + + M G
Sbjct: 415 LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 474
Query: 207 IRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
I P+ +N LI CK R AE++F+ M +R + TYN +I+ Y D
Sbjct: 475 IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534
Query: 267 NLRERMKKENVEMN 280
L +MK + + N
Sbjct: 535 RLLGKMKSQGILPN 548
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 37/206 (17%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKV--IELFMEIQD 169
L C + + +A L +R+DG + +++++SL + D V + L+ EI+
Sbjct: 203 LIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIER 262
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELL------------------------------ 199
D + K GD +K ++LL
Sbjct: 263 DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLE 322
Query: 200 -----ESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLID 254
E + + GI+P YN L+ G K + DAE + EM KR + TY+ LID
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 255 GYCKVGEVDKAFNLRERMKKENVEMN 280
Y G + A + + M+ +V+ N
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPN 408
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 60/141 (42%)
Query: 132 IRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGD 191
++ G P + + L+ +F+ IE E++ G +P Y + A + G
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 192 VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
+ + MT G++P++ N LI ++RR +A + M + + VTY +
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 252 LIDGYCKVGEVDKAFNLRERM 272
L+ +V + K + E M
Sbjct: 660 LMKALIRVDKFQKVPVVYEEM 680
>AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3606490-3608409 FORWARD
Length = 602
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKF-----PALGSLNMLLRSLVDFKQFDK 159
+L ++L C+ + EA+ +L R G P++ N+LL ++ +
Sbjct: 211 ELRLLEVLLDALCKEGHVREAS--MYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQ 268
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
+L+ E++ +P +TYG ++ ++ V +E+LE M + N ++N +I
Sbjct: 269 AEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIID 328
Query: 220 GLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
GL + R+ +A + + + + + VTYNSL+ +CK G++ A + + M V+
Sbjct: 329 GLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVD 387
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 209 PNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
P+V I+N+L+ G + R++ AEKL++EM + + VTY +LI+GYC++ V A +
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 269 RERMKKENVEMN 280
E MK +E+N
Sbjct: 308 LEEMKMAEMEIN 319
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 76/156 (48%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C++ L A+++ ++ G P + N + + ++ + L+ ++ ++G PD+
Sbjct: 366 CKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDR 425
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
+TY ++ + G ++ +++ + M RGI P++ +LI LC+ + +A + FD
Sbjct: 426 LTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDN 485
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+R ++ +T+ + +G G D A L M
Sbjct: 486 AVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 69/136 (50%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + S N L++ L F + + L EI++ G +PD +T+ + + G +G ++
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M ++ ++ ++ YN + GL E + + LFD++ +L T+ ++I G+
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 259 VGEVDKAFNLRERMKK 274
G++D+A + ++K
Sbjct: 295 EGKLDEAITWYKEIEK 310
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 132 IRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGD 191
++RD + S N L L + ++++ LF +++ + +PD T+ ++ V G
Sbjct: 243 VKRD-----IRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 297
Query: 192 VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
+++ I + + K G RP F++N L+ +CK + A +L E++ ++L+
Sbjct: 298 LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQE 357
Query: 252 LIDGYCKVGEVDKAFNLRERMK 273
++D K + D+A + E K
Sbjct: 358 VVDALVKGSKQDEAEEIVELAK 379
>AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: EMB2745 (EMBRYO DEFECTIVE 2745)
(TAIR:AT5G39710.1); Has 19818 Blast hits to 5849
proteins in 171 species: Archae - 3; Bacteria - 16;
Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0;
Other Eukaryotes - 1100 (source: NCBI BLink). |
chr4:16599976-16605994 REVERSE
Length = 1089
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 4/170 (2%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
++ F C + + + EA LI P + + NML+ + + +
Sbjct: 437 IYHASFFKACKKQRAVKEAFRFTKLILN----PTMSTFNMLMSVCASSQDIEGARGVLRL 492
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+Q+SG D Y + + K G V+ E+ M+ G+ N+ + LI G + +
Sbjct: 493 VQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ 552
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
+ A + + + + V +N+LI + G VD+AF++ MK E
Sbjct: 553 VAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAET 602
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L CC +K +A ELY I+ P + ++N L+ +L + Q K +E EI+ G
Sbjct: 720 LMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLG 779
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+P+ +TY + A+ + D +LL G+ PN+ + I LCK R
Sbjct: 780 LKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC-ITSLCKRR 832
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 75/169 (44%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
L CC + + A E+Y +I + G + + S +D ++ ++++
Sbjct: 615 LMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKD 674
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
PD++ + + A +++ +L+ +GIR Y+ L+G C + A
Sbjct: 675 VTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKAL 734
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+L++++ KL + T N+LI C+ ++ KA + +K ++ N
Sbjct: 735 ELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPN 783
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 73/171 (42%), Gaps = 2/171 (1%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI--QD 169
L C + +++A Y ++R P N L+ + D+ ++ E+ +
Sbjct: 543 LIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAET 602
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
PD ++ G ++A G V + E+ + + K GIR +Y + + K
Sbjct: 603 HPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDF 662
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
A ++ +M ++ + V +++LID +D+AF + + K + + +
Sbjct: 663 ACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLG 713
>AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22704630-22706126 REVERSE
Length = 498
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKF-PALGSLNMLLRSLVDFKQFDKVI--ELF 164
F+ LL + C E +M EA ++ + +F P + ++N+LL + FK+ V ELF
Sbjct: 179 FNILLRAFCTEREM-KEARSIFE--KLHSRFNPDVKTMNILL---LGFKEAGDVTATELF 232
Query: 165 M-EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCK 223
E+ GF+P+ +TYG + K + + + L E M + V I LI G
Sbjct: 233 YHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGV 292
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
R A +LFDE+ KR L YN+L+ K G+V A + + M+++ +E
Sbjct: 293 ARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIE 347
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
K +LF EI G PD Y + + +K GDV+ I++++ M ++GI P+ ++ +
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 219 GGLCKERRIG--DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
G+ K + G + + +M +R LV T T L+ +C GEV+ +L + M
Sbjct: 358 IGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
>AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL
FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040
FORWARD
Length = 778
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEI-QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLES 201
+ N+LL+ Q D+ +L E+ +D+G PD ++Y + + + D +
Sbjct: 489 TYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNE 548
Query: 202 MTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG-STVTYNSLIDGYCKVG 260
M RGI P Y L+ + A ++FDEM V + +N L++GYC++G
Sbjct: 549 MRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLG 608
Query: 261 EVDKAFNLRERMKK 274
++ A + RMK+
Sbjct: 609 LIEDAQRVVSRMKE 622
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
+++E D PD++TY V A V G +++ ++L M + G+ N YNVL+
Sbjct: 435 RMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLL 494
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLV-GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
G CK+ +I AE L EM + + V+YN +IDG + + A M+ +
Sbjct: 495 KGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGI 554
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK---RGIRPNVFIYNVLIGGLCKERRIG 228
F PD Y ++ +K G V +LE+M + R P+ Y ++ +
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
A ++ EM + + + +TYN L+ GYCK ++D+A +L M ++
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTED 516
>AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796);
ATP binding | chr3:18256086-18257975 FORWARD
Length = 629
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 117 CESKMLSEATELYHLIRRDGKF---PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFR 173
C EA E++ R+ G F P S N L+ L D + + +L+ E+++ +
Sbjct: 361 CAGGKFEEAMEVF---RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVK 417
Query: 174 PDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKL 233
PD+ TYG + K G +++G ++M + +RPN+ +YN L L K ++ DA+
Sbjct: 418 PDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSF 477
Query: 234 FDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
FD M KL Y ++ + G +D+ + + M
Sbjct: 478 FD-MMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKM-----TYGKAVQAAVKLGDVNKGIE 197
+ N +L +L + +FD+ ++LF ++ P + T+ V G + +E
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 198 LLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYC 257
+ M P+ +N L+ LC + +AEKL+ EM ++ + TY L+D
Sbjct: 372 VFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCF 431
Query: 258 KVGEVDKAFNLRERMKKENVEMN 280
K G++D+ + M + N+ N
Sbjct: 432 KEGKIDEGAAYYKTMVESNLRPN 454
>AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6090954-6092333 FORWARD
Length = 459
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 122 LSEATELYHLIRRD-GKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYG 180
+ +A EL++ + + G + N LL +L D K F L + G +PDK TY
Sbjct: 162 VDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYA 221
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
V G + + E L+ M++RG P ++LI GL + A+++ +M K
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG 281
Query: 241 KLVGSTVTYNSLIDGYCKVGEVD 263
V T+N LI+ K GEV+
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVE 304
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDS 170
+L + C + + EA E + R G P ++L+ L++ + E+ ++
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG 281
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
GF PD T+ ++A K G+V IE+ + K G+ ++ Y LI + K +I +A
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+L + + Y +I G C+ G D AF+ MK
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMK 384
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 107 VFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
V++ LL ++C + KM A L + R G P + +L+ + + E E
Sbjct: 184 VYNSLLHALC-DVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDE 242
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+ GF P ++ + G + E++ MTK G P++ +N+LI + K
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ +++ K L TY +LI K+G++D+AF L
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRL 344
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
DLL + L A E+ + + G P + + N+L+ ++ + + IE++
Sbjct: 256 DLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACK 315
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
G D TY + A K+G +++ LL + + G +P +Y +I G+C+ D
Sbjct: 316 LGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDD 375
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE-VDKAFNLRE 270
A F +M + + Y LI + G+ VD A L E
Sbjct: 376 AFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVE 417
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 107 VFSDLLFSVC-CESKMLSEATELYHLIRRDGKF-PALGSLNMLLRSLVDFKQFDKVIELF 164
V S+ +F V S+ +++ ++ R + + P L +SL K+++ + ++
Sbjct: 75 VTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKIL 134
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKR-GIRPNVFIYNVLIGGLCK 223
+++D T ++ K G V++ +EL + K G + V +YN L+ LC
Sbjct: 135 KQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCD 194
Query: 224 ERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKK 274
+ A L M ++ L TY L++G+C G++ +A + M +
Sbjct: 195 VKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 40/210 (19%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+ ++ +L + C K EA EL + ++G P L + N+L+ + D ++L
Sbjct: 248 IAWNSVLLAYCQNGKH-EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ 306
Query: 166 EIQD-----------------------------------SGFRPDKMTYGKAVQAAVKLG 190
+++ +G P+ +T AV A L
Sbjct: 307 KMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK 366
Query: 191 DVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYN 250
+N+G E+ K G +V + N L+ K ++ DA K+FD + + + T+N
Sbjct: 367 VINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY----TWN 422
Query: 251 SLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
S+I GYC+ G KA+ L RM+ N+ N
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 114 SVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFR 173
S C K++++ +E++ + + G + ++ SLVD +E ++ DS
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDV----LVGNSLVDMYSKCGKLEDARKVFDSVKN 415
Query: 174 PDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKL 233
D T+ + + G K EL M +RPN+ +N +I G K G+A L
Sbjct: 416 KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDL 475
Query: 234 FDEMYKR-KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
F M K K+ +T T+N +I GY + G+ D+A L +M+
Sbjct: 476 FQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 156 QFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYN 215
++ +V +LF + G PD + K +Q GDV G + + K G+ + + N
Sbjct: 161 RWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSN 220
Query: 216 VLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
++ K + A K F M +R ++ +NS++ YC+ G+ ++A L + M+KE
Sbjct: 221 SILAVYAKCGELDFATKFFRRMRERDVIA----WNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 276 NV 277
+
Sbjct: 277 GI 278
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 5/159 (3%)
Query: 123 SEATELYHLIRRDGKFP-ALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
EA +L+ + +DGK + N+++ + + D+ +ELF ++Q S F P+ +T
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ A L E+ + +R + + N L K I + +F M +
Sbjct: 530 LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 589
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ +T+NSLI GY G A L +MK + + N
Sbjct: 590 I----ITWNSLIGGYVLHGSYGPALALFNQMKTQGITPN 624
>AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23106600-23108399 REVERSE
Length = 599
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 82/172 (47%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V +++ S+ S+A +L+H+++ G P + S +++R + IE F
Sbjct: 333 IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 392
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ DSG +PD Y + ++ ELL+ M ++G P+ YN LI + ++
Sbjct: 393 DMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 452
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
A +++++M + ++ S T+N ++ Y + + E M K+ +
Sbjct: 453 MPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGI 504
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + +LL + + ++ ++ D G +PD + + ++ ++ + I+L
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M +G PNV Y ++I CK+ + A + FD+M L Y LI G+
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 259 VGEVDKAFNLRERMKKEN 276
++D + L + M+++
Sbjct: 416 QKKLDTVYELLKEMQEKG 433
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 60/156 (38%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + A E + + G P L+ K+ D V EL E+Q+ G PD
Sbjct: 379 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY ++ + M + I P++ +N+++ R +++E
Sbjct: 439 KTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEE 498
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M K+ + +Y LI G G+ +A E M
Sbjct: 499 MIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 534
>AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17292479-17293717 REVERSE
Length = 412
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 36/209 (17%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
F L ++ M + A + + + G + S N LL + + K FDKV +LF EI
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI 163
Query: 168 QD--SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ PDK++YG +++ G K IE++ M +G+ + ++ L K+
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 226 RIGDAEKLFDEMYKR----------------------------------KLVGSTVTYNS 251
+ A+ L++EM K+ L T++YN
Sbjct: 224 ELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 252 LIDGYCKVGEVDKAFNLRERMKKENVEMN 280
L+ YC+ G +D+A + E ++ N N
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPN 312
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 101 TPLLQLVFSDLLFSVCCESKMLSEATELYHLI--RRDGKFPALGSLNMLLRSLVDFKQFD 158
TP + F+ LL + C SK + +L+ I R + P S +L++S D +
Sbjct: 133 TPRSAVSFNALL-NACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPE 191
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGD-----------VNKGIEL--------- 198
K IE+ ++Q G + + + + K G+ V KG EL
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI 251
Query: 199 --------------LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
+E M+ G++P+ YN L+ C+ + +A+K+++ +
Sbjct: 252 MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAP 311
Query: 245 STVTYNSLIDGYC 257
+ T+ +LI C
Sbjct: 312 NAATFRTLIFHLC 324
>AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006) |
chr5:20459238-20461504 FORWARD
Length = 723
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK-VIELFMEIQDSGFRPDKM 177
S+ +A E+Y + + +P + +L+ +L + K V E+F ++ + G + +
Sbjct: 286 SQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQD 345
Query: 178 TYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
+G V++ G + + + M K+GIR N +YN L+ K I + E LF EM
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM 405
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ L S TYN L+D Y + + D L M+ +E N
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%)
Query: 120 KMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTY 179
KM A + + +++ G P+ S L+ + +K F E+ G +P TY
Sbjct: 464 KMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETY 523
Query: 180 GKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYK 239
+ A + GD K +E+ + M + I+ YN L+ G K+ +A + E K
Sbjct: 524 TSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSK 583
Query: 240 RKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
L S +TYN L++ Y + G+ K L + M N++
Sbjct: 584 MGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLK 622
>AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat
336) | chr1:22865326-22866552 REVERSE
Length = 408
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ V CES S + + + R G P S +++ + D+V ++ ++D G
Sbjct: 193 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG 252
Query: 172 FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAE 231
TY +Q+ K + LL+ M G++PN Y+ LI G C E +A+
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAK 312
Query: 232 KLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL-RERMKKENV 277
KLF M R + Y +LI CK G+ + A +L +E M+K V
Sbjct: 313 KLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 36/162 (22%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDS-GFRPDKMTYGKAVQAAVKLGDVNKGIELLES 201
SLN LL + + K + + +++E+ G PD TY + ++ + G + ++
Sbjct: 153 SLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAE 212
Query: 202 MTKRGIRPN-----------------------------------VFIYNVLIGGLCKERR 226
M ++GI+PN V YN+ I LCK ++
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+A+ L D M + +TVTY+ LI G+C + ++A L
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKL 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
E ++ +++ G + + N+ ++SL K+ + L + +G +P+ +TY +
Sbjct: 240 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
D + +L + M RG +P+ Y LI LCK A L E ++ V
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE---NVEM 279
S SL++G K +V++A L ++K++ NVE+
Sbjct: 360 PSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVEL 398
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 113 FSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGF 172
F++ E++ ++E +E+ H + N+L+ S + K+F + + ++ + G
Sbjct: 131 FNLLDEAQTITENSEILHPL----------PWNVLIGSYIRNKRFQESVSVYKRMMSKGI 180
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK 232
R D+ TY ++A L D G + S+ R N+++ N LI + ++ A +
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARR 240
Query: 233 LFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
LFD M +R V++N++I+ Y ++ +AF L +RM VE
Sbjct: 241 LFDRMSERD----AVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 121 MLSEATELYH--LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
M S ++L H ++ + + +L + N ++ ++ ++ L E+ SGF P+ +T
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKR-GIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
+ ++G++ G E + +R + + ++N L+ K I A+++FD M
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
KR VTY SLIDGY ++G+ + A + M + ++
Sbjct: 486 RKRD----KVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 113 FSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGF 172
F++ E++ ++E +E+ H + N+L+ S + K+F + + ++ + G
Sbjct: 131 FNLLDEAQTITENSEILHPL----------PWNVLIGSYIRNKRFQESVSVYKRMMSKGI 180
Query: 173 RPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEK 232
R D+ TY ++A L D G + S+ R N+++ N LI + ++ A +
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARR 240
Query: 233 LFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
LFD M +R V++N++I+ Y ++ +AF L +RM VE
Sbjct: 241 LFDRMSERD----AVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 121 MLSEATELYH--LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
M S ++L H ++ + + +L + N ++ ++ ++ L E+ SGF P+ +T
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKR-GIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
+ ++G++ G E + +R + + ++N L+ K I A+++FD M
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 238 YKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
KR VTY SLIDGY ++G+ + A + M + ++
Sbjct: 486 RKRD----KVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 14/177 (7%)
Query: 103 LLQLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFP----ALGSLNMLLRSLVDFKQFD 158
+L L + L S LS A L +RR FP + N L+RS D +
Sbjct: 56 ILTLNLTSHLISTYISVGCLSHAVSL---LRR---FPPSDAGVYHWNSLIRSYGDNGCAN 109
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
K + LF + + PD T+ +A ++ V G G NVF+ N L+
Sbjct: 110 KCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALV 169
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ R + DA K+FDEM V V++NS+I+ Y K+G+ A + RM E
Sbjct: 170 AMYSRCRSLSDARKVFDEMS----VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDS-GFRPDKMTYGKAVQAAVKLGDVNKGIELLES 201
S N ++ S + +E+F + + G RPD +T + LG + G +L
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254
Query: 202 MTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE 261
+ N+F+ N L+ K + +A +F M V V++N+++ GY ++G
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS----VKDVVSWNAMVAGYSQIGR 310
Query: 262 VDKAFNLRERMKKENVEMN 280
+ A L E+M++E ++M+
Sbjct: 311 FEDAVRLFEKMQEEKIKMD 329
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 158 DKVIELFMEIQDSGFRP-DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNV 216
+K IEL+ + DS ++ Y ++A +GD+ GI + E + K +R +V + N
Sbjct: 88 NKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNS 147
Query: 217 LIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
++ K R+ +A F E+ + S+ ++N+LI GYCK G +D+A L RM + N
Sbjct: 148 VVDMYVKNGRLIEANSSFKEILRP----SSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN 203
Query: 277 V 277
V
Sbjct: 204 V 204
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 194 KGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLI 253
+G + + K+GI NVFI N +I R + DA K+FDEM +R + VT+ +++
Sbjct: 23 RGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI----VTWTTMV 78
Query: 254 DGYCKVGEVDKAFNLRERM 272
GY G+ +KA L RM
Sbjct: 79 SGYTSDGKPNKAIELYRRM 97
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 39/169 (23%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTY---------------GKAVQAAV- 187
LN L+R L + +F+ + F+ + G +PD++T+ G+A+ AA
Sbjct: 94 LNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATL 153
Query: 188 -------------------KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
K G + ++ E R + ++ I+NVLI G C+ + +
Sbjct: 154 KNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMH 213
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
A LF M +R ++ ++++LI GY GE+++A L E M ++NV
Sbjct: 214 MATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV 258
>AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: PTAC2 (PLASTID
TRANSCRIPTIONALLY ACTIVE2) (TAIR:AT1G74850.1); Has 17570
Blast hits to 5782 proteins in 175 species: Archae - 1;
Bacteria - 18; Metazoa - 305; Fungi - 261; Plants -
16266; Viruses - 0; Other Eukaryotes - 719 (source: NCBI
BLink). | chr1:3639908-3643974 FORWARD
Length = 664
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 76/154 (49%)
Query: 124 EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
+A EL ++ G P + LL+ + FD+ EL E++ +G+ ++M Y +
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
K G + + + + M +G+R + + +++I LC+ +R +A++L +
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
V N+++ YC+ GE++ + ++M ++ V
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAV 443
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQ-FDKVIELFMEIQDS 170
+ S ++ L +L+ ++RDG P + + N LL + K + K IEL E+ +
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHN 231
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G + D + YG + G + ++ M G PN++ Y+ L+ + A
Sbjct: 232 GIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA 291
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
++L EM LV + V +L+ Y K G D++ L
Sbjct: 292 DELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
LN++LR ++ +I+LF +Q G + TY ++ V +V+K +E+ +S+
Sbjct: 101 LNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKF-VGAKNVSKALEIYQSIP 158
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGE-V 262
+ NV+I N ++ L K ++ KLFD+M + L VTYN+L+ G KV
Sbjct: 159 DESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGY 218
Query: 263 DKAFNLRERMKKENVEMN 280
KA L + ++M+
Sbjct: 219 PKAIELIGELPHNGIQMD 236
>AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4445461-4447290 FORWARD
Length = 609
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 72/147 (48%)
Query: 122 LSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGK 181
+EA ++Y ++ + + + + ++++K LF E+ GF + Y
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 182 AVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRK 241
+ K ++ + L+ M +RG +PN++IYN LI + + AEK++ EM + K
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAK 488
Query: 242 LVGSTVTYNSLIDGYCKVGEVDKAFNL 268
++ V+Y S+I Y + E+++ L
Sbjct: 489 VLPDKVSYTSMISAYNRSKELERCVEL 515
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 157 FDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNV 216
F + ++++ ++TY A+ A +L NK L + M K+G V Y+
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 217 LIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
++ K RR+ DA +L +M +R + YNSLID + + ++ +A + + MK+
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAK 488
Query: 277 V 277
V
Sbjct: 489 V 489
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 109 SDLLFSVCCESKMLS----EATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
S ++++ C S S EA E+ ++ G + +ML+R+ + ++ +LF
Sbjct: 247 SGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLF 306
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E D K V V+ G++ +E++ +M K ++ I ++ G K+
Sbjct: 307 KEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQ 366
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
R +A K+++ K + VTY I+ YC++ + +KA L + M K+
Sbjct: 367 RGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKK 417
>AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4962293-4965976 FORWARD
Length = 1227
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 58/107 (54%)
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
E++ GF+ D++T+G + GD+ + + L + +G +P+V+ YN ++ GL ++
Sbjct: 348 ELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKG 407
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
+ DEM + ++ S T+ ++ GYCK + ++A + +M
Sbjct: 408 LWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKM 454
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 20/171 (11%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDG--KFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
L+ VC + + + ++ L+ R G K +G+ S VDF + K +LF +
Sbjct: 115 LVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGT------SFVDF--YGKCKDLFSARK 166
Query: 169 DSGFRPDK--MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
G P++ +++ V A VK G++ + + + M +R N+ +N L+ GL K
Sbjct: 167 VFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPER----NLGSWNALVDGLVKSGD 222
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ +A+KLFDEM KR + ++Y S+IDGY K G++ A +L E + +V
Sbjct: 223 LVNAKKLFDEMPKRDI----ISYTSMIDGYAKGGDMVSARDLFEEARGVDV 269
>AT5G67570.1 | Symbols: DG1, EMB1408 | DG1 (DELAYED GREENING 1) |
chr5:26952352-26954847 FORWARD
Length = 611
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P L N +L + V Q+ V +F+E++ +G RP+ TYG A++ ++ G ++ +
Sbjct: 339 PDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDF 398
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M G P Y VL+ L +E +I +A + +M ++ ++G+ Y L C
Sbjct: 399 FRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCN 458
Query: 259 VGEVDKAFNLRERMKK 274
G A RMK+
Sbjct: 459 NGRWCDAMLEVGRMKR 474
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 102 PLLQ--LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDK 159
P+L+ LV + + + C + + ++ +R++G P + + + +++ +FD+
Sbjct: 335 PVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDR 394
Query: 160 VIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIG 219
V + F +++ SG P +TY V+A + G + + +E + M ++G+ +Y L
Sbjct: 395 VHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELAC 454
Query: 220 GLCKERRIGDAEKLFDEMYK----RKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
LC R DA M + R L +T+ LI G VD + + MK
Sbjct: 455 CLCNNGRWCDAMLEVGRMKRLENCRPL---EITFTGLIAASLNGGHVDDCMAIFQYMK 509
>AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4792072-4793868 REVERSE
Length = 598
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%)
Query: 123 SEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
S+A +L+H+++ G P + S +++R + IE F ++ DSG +PD Y
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
+ ++ ELL+ M ++G P+ YN LI + ++ +++++M + ++
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Query: 243 VGSTVTYNSLIDGY 256
S T+N ++ Y
Sbjct: 469 EPSIHTFNMIMKSY 482
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + +LL + + ++ ++ D G +PD + + ++ ++ + I+L
Sbjct: 295 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 354
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M +G PNV Y ++I CK+ + A + FD+M L Y LI G+
Sbjct: 355 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 414
Query: 259 VGEVDKAFNLRERMKKEN 276
++D + L + M+++
Sbjct: 415 QKKLDTVYELLKEMQEKG 432
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + A E + + G P L+ K+ D V EL E+Q+ G PD
Sbjct: 378 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 437
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY ++ G + M + I P++ +N+++ R ++DE
Sbjct: 438 KTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDE 497
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M K+ + +Y LI G G+ +A E M
Sbjct: 498 MIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 533
>AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23133514-23135313 REVERSE
Length = 599
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%)
Query: 123 SEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKA 182
S+A +L+H+++ G P + S +++R + IE F ++ DSG +PD Y
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 183 VQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
+ ++ ELL+ M ++G P+ YN LI + ++ +++++M + ++
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Query: 243 VGSTVTYNSLIDGY 256
S T+N ++ Y
Sbjct: 470 EPSIHTFNMIMKSY 483
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + +LL + + ++ ++ D G +PD + + ++ ++ + I+L
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 355
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M +G PNV Y ++I CK+ + A + FD+M L Y LI G+
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 259 VGEVDKAFNLRERMKKEN 276
++D + L + M+++
Sbjct: 416 QKKLDTVYELLKEMQEKG 433
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%)
Query: 117 CESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDK 176
C+ + A E + + G P L+ K+ D V EL E+Q+ G PD
Sbjct: 379 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
TY ++ G + M + I P++ +N+++ R ++DE
Sbjct: 439 KTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDE 498
Query: 237 MYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
M K+ + +Y LI G G+ +A E M
Sbjct: 499 MIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 534
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N ++ V +Q + LF + + G PDK TY + L G ++ +
Sbjct: 528 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 587
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
K+ ++ +V+I + L+ K + D+ +F++ +R VT+N++I GY G+
Sbjct: 588 IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF----VTWNAMICGYAHHGKG 643
Query: 263 DKAFNLRERMKKENVEMN 280
++A L ERM EN++ N
Sbjct: 644 EEAIQLFERMILENIKPN 661
>AT5G03560.2 | Symbols: | nucleobase:cation symporter |
chr5:901452-902719 REVERSE
Length = 363
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 127 ELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAA 186
E++H +R +G + +L + + +ELF +I+D PD + + V+A
Sbjct: 186 EIFHKMRTEG---FTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAY 242
Query: 187 VKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG-DAEKLFDEMYKRKLVGS 245
G + +++ M G+ PN + Y+VLI GL + + DA+K EM + +
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPN 302
Query: 246 TVTYNSLIDGYCKVGEVDKAFNLRERMK 273
TY ++ + + + G+ + A L + MK
Sbjct: 303 AATYTAVFEAFVREGKEESARELLQEMK 330
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 8/85 (9%)
Query: 192 VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
V ++L E M++R + +N ++GGL K + DA +LFDEM +R L+ ++N+
Sbjct: 170 VRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLI----SWNT 221
Query: 252 LIDGYCKVGEVDKAFNLRERMKKEN 276
++DGY + E+ KAF L E+M + N
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERN 246
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S L++ Q+ + +ELF E+++ G +++T + A LG + L
Sbjct: 394 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 453
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
K + VF+ L+ C + DA KLFDEM +R L VT+N +++GY K G +
Sbjct: 454 IKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL----VTWNVMLNGYSKAGLI 509
Query: 263 DKAFNLRERMKKENV 277
++A L +++ ++++
Sbjct: 510 EQAEELFDQITEKDI 524
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N ++ + K + + ++LF+ + G +PD T + A+ L ++ G+++ + +
Sbjct: 376 SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV 435
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
K I P+V ++N LI + I ++ ++FDEM KL +T+N++I GY G
Sbjct: 436 VKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEM---KLKREVITWNAMIGGYAFHGNA 491
Query: 263 DKAFNLRERMKKENV 277
+A NL MK +
Sbjct: 492 SEALNLFGSMKSNGI 506
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDV---NKGIELL 199
+ N ++ V ++ ++ +LF D + D +T+ + V G + + +L
Sbjct: 73 TWNTMISGYVKRREMNQARKLF----DVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLF 128
Query: 200 ESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKV 259
+ M R + F +N +I G K RRIG+A LF++M +R + V+++++I G+C+
Sbjct: 129 DEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQN 180
Query: 260 GEVDKAFNLRERM 272
GEVD A L +M
Sbjct: 181 GEVDSAVVLFRKM 193
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%)
Query: 106 LVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFM 165
+V + L CE L EA L I G P + + N LL S QF+ E++
Sbjct: 180 IVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWA 239
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
++ + D TY + + + L + G++P+VF +N +I G E
Sbjct: 240 KMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEG 299
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
++ +AE + E+ K T+ L+ CK G+ + A L
Sbjct: 300 KMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIEL 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + S N L+++L + + + L EI++ G +PD +T+ + ++ G G E+
Sbjct: 178 PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEI 237
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M ++ + ++ YN + GL E + + LF E+ L ++N++I G
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 259 VGEVDKA 265
G++D+A
Sbjct: 298 EGKMDEA 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Query: 108 FSDLLFSVCCESKMLSEATELYH-LIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFME 166
F+ + S+ ++ M A +++ + RD K L S N LL + K+FD V ELF E
Sbjct: 111 FAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVL-SFNALLSAYRLSKKFDVVEELFNE 169
Query: 167 IQDS-GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+ +PD ++Y ++A + + + + LL+ + +G++P++ +N L+ +
Sbjct: 170 LPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKG 229
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
+ E+++ +M ++ + TYN+ + G + + NL
Sbjct: 230 QFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNL 272
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 75/160 (46%)
Query: 121 MLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYG 180
+ ++A E + + + G P + + +L + ++V+ L+ +G++PD + +
Sbjct: 236 LYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFS 295
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
+ + GD + +L+ M ++PNV +YN L+ + + + G A LF+EM +
Sbjct: 296 VLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEA 355
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
L + T +L+ Y K A L E MK + M+
Sbjct: 356 GLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMD 395
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N+ ++SL +QF + E+ +E+ G D +TY + A + NK IE E M K
Sbjct: 190 NVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYK 249
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
G+ P+ Y+ ++ K ++ + L++ + ++ L + + G+ D
Sbjct: 250 TGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDG 309
Query: 265 AFNLRERMKKENVEMN 280
+ + MK +V+ N
Sbjct: 310 IRYVLQEMKSMDVKPN 325
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Query: 105 QLVFSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELF 164
++ +S +L V +S + E LY G P + ++L + + +D + +
Sbjct: 256 EVTYSAIL-DVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVL 314
Query: 165 MEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
E++ +P+ + Y ++A + G L M + G+ PN L+ K
Sbjct: 315 QEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKA 374
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG---EVDKAFN 267
R DA +L++EM +K + YN+L++ +G E ++ FN
Sbjct: 375 RWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFN 420
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N ++R + KV+ELFM+++ SG+ D T+ + D+ G + +
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
K+ + N+F+ N L+ K + DA ++F+ M R VT+N++I Y +
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR----DNVTWNTIIGSYVQDENES 511
Query: 264 KAFNLRERM 272
+AF+L +RM
Sbjct: 512 EAFDLFKRM 520
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+ N +L + KV+ F+ + ++ P+K T+ + + +V G ++ SM
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM 186
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
K G+ N + L+ K RI DA ++F+ + +TV + L GY K G
Sbjct: 187 IKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP----NTVCWTCLFSGYVKAGLP 242
Query: 263 DKAFNLRERMKKEN 276
++A + ERM+ E
Sbjct: 243 EEAVLVFERMRDEG 256
>AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6165449-6167515 FORWARD
Length = 688
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 112 LFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSG 171
+ S+C + EA + + G P +L+ ++ SL D +FD+ F+ SG
Sbjct: 61 IHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASG 120
Query: 172 FRPDKMTYGKAV-------QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKE 224
F PD+ T + LG +++ I K+ P++ YN L+ LC
Sbjct: 121 FIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGF-----KKEFVPSLTNYNRLMNQLCTI 175
Query: 225 RRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
R+ DA KL +M R + VT+ +LI GYC++ E++ A + + M+ + N
Sbjct: 176 YRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPN 231
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P+L + N L+ L + +L ++++ G PD +T+ + ++ ++ ++
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY-----KRKLVGSTVTYNSLI 253
+ M GIRPN +VLIGG K R + KL E++ + + +L+
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 254 DGYCKVGEVDKAFNLRERM 272
D C+ G + F + E M
Sbjct: 280 DSMCREGYFNDIFEIAENM 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 60/136 (44%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + N ++R L + D+ + +F +++ + D TY + V+ +
Sbjct: 517 PGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKF 576
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
+ + R + F+Y + GLC+ + DA ++ + + V YN++I +
Sbjct: 577 WDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSR 636
Query: 259 VGEVDKAFNLRERMKK 274
G +A+ + E M+K
Sbjct: 637 SGLKREAYQILEEMRK 652
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 138 FPALGSLNMLLRSL---VDFKQFDKVIELFMEIQDSGFRPDKM-TYGKAVQAAVKLGDVN 193
FP+ + +L+ SL +D + V+EL + + + D+ Y ++ + +
Sbjct: 374 FPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGA----DRTRIYNIYLRGLCVMDNPT 429
Query: 194 KGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG-STVTYNSL 252
+ + +L SM + RP+ + N +I GLCK R+ DA K+ D+M K VT N++
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 253 IDGYCKVGEVDKAFNLRERMKKEN 276
+ G G ++A ++ R+ EN
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPEN 513
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLES-MT 203
N+ LR L +++ + + + RPD+ T + K+G V+ +++L+ MT
Sbjct: 416 NIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMT 475
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE-MYKRKLVGSTVTYNSLIDGYCKVGEV 262
+ P+ N ++ GL + R +A + + M + K+ V YN++I G K+ +
Sbjct: 476 GKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKG 535
Query: 263 DKAFNLRERMKKENV 277
D+A ++ +++K +V
Sbjct: 536 DEAMSVFGQLEKASV 550
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N ++R+ F + +E + ++++S PDK T+ ++A L D G + E +
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
G ++F+ N L+ + + A ++FDEM R LV ++NSLI GY G +
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLV----SWNSLISGYSSHGYYE 189
Query: 264 KAFNLRERMKKENV 277
+A + +K +
Sbjct: 190 EALEIYHELKNSWI 203
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N ++ + + ++LF + + D +TY + + +L D+ G L +
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
K GI ++ + N LI K +GD+ K+F M G TVT+N++I + G+
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG----TGDTVTWNTVISACVRFGDF 490
Query: 263 DKAFNLRERMKKENV 277
+ +M+K V
Sbjct: 491 ATGLQVTTQMRKSEV 505
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 141 LGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLE 200
L S N L+ +++ +E++ E+++S PD T + A L V +G L
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHG 231
Query: 201 SMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG 260
K G+ V + N L+ K RR DA ++FDEM R +V+YN++I GY K+
Sbjct: 232 FALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR----DSVSYNTMICGYLKLE 287
Query: 261 EVDKAFNLRERMKKENVE 278
V+++ RM EN++
Sbjct: 288 MVEESV----RMFLENLD 301
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 145 NMLLRSLVDFKQFDKVIELFME-IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N ++ S + +D+V+E F+E I + PD TY ++A + DV G+ + +
Sbjct: 155 NAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVV 214
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
K G+ +VF+ N L+ + DA +LFD M +R L V++NS+I + G +
Sbjct: 215 KTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL----VSWNSMIRVFSDNGFSE 270
Query: 264 KAFNLRERMKKEN 276
++F L M +EN
Sbjct: 271 ESFLLLGEMMEEN 283
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
++ + R ++ + N+ +R V+ + + LF E++ GF P+ T+ +A
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
+L DV + + K +VF+ + K + A K+F+ M +R
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPER----DAT 119
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMK 273
T+N+++ G+C+ G DKAF+L M+
Sbjct: 120 TWNAMLSGFCQSGHTDKAFSLFREMR 145
>AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G15010.1); Has
14980 Blast hits to 5082 proteins in 161 species: Archae
- 0; Bacteria - 2; Metazoa - 156; Fungi - 253; Plants -
14070; Viruses - 0; Other Eukaryotes - 499 (source: NCBI
BLink). | chr5:17618948-17620588 FORWARD
Length = 546
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 110 DLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
+ L CE +S A +++ + + F + S N+++ + +++ ++ E+ +
Sbjct: 225 NALLRCLCERSHVSAAKSVFNAKKGNIPFDSC-SYNIMISGWSKLGEVEEMEKVLKEMVE 283
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGD 229
SGF PD ++Y ++ + G +N +E+ +++ +G P+ +YN +I R +
Sbjct: 284 SGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDE 343
Query: 230 AEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ + + M + + TY+ L+ G K +V A + E M V
Sbjct: 344 SMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 132 IRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGD 191
+R G +GS +++LR+L K F ++++ + G PD A+ + V++
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 192 VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
V + IEL E G++ + +N L+ LC+ + A+ +F+ K + + +YN
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK-KGNIPFDSCSYNI 260
Query: 252 LIDGYCKVGEVDKAFNLRERMKKENVE 278
+I G+ K+GEV++ E++ KE VE
Sbjct: 261 MISGWSKLGEVEEM----EKVLKEMVE 283
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQ 184
A EL+ G + S N LLR L + +F + D +Y +
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNIPFDSCSYNIMIS 263
Query: 185 AAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVG 244
KLG+V + ++L+ M + G P+ Y+ LI GL + RI D+ ++FD + + V
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 245 STVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
YN++I + + D++ RM E E N
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPN 359
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 126 TELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQA 185
T+ +L+ +FP + N L+ V+ F + ++LF+ I+ G T+ ++A
Sbjct: 61 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 186 AVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGS 245
+ GI+L + K G +V L+ R+ DA KLFDE+ R S
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR----S 176
Query: 246 TVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
VT+ +L GY G +A +L ++M + V+
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
+ I+LF ++ + G +PD + + A V +GD++ G +++ M + ++ N F+ L+
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
K ++ A +FD M ++ + VT++++I GY + L +M +EN++
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDI----VTWSTMIQGYASNSFPKEGIELFLQMLQENLK 310
>AT1G30610.1 | Symbols: emb2279 | emb2279 (embryo defective 2279) |
chr1:10846676-10850517 FORWARD
Length = 1006
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + N +L + V KQ++ + +++ G +P +TYG ++ + N E
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
M K I PN Y VL+ L KE + +A ++M R +VGS Y L C
Sbjct: 651 FRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCS 709
Query: 259 VGEVDKAFNL 268
G ++ N+
Sbjct: 710 AGRCNEGLNM 719
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N L+ +K +ELF + GFRP +Y A G + +G + M
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
K G + F N L+ K I DA K+FD + KR + V++NSL+ Y + G
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV----VSWNSLLTAYAQHGFG 344
Query: 263 DKAFNLRERMKKENVEMN 280
+A E M++ + N
Sbjct: 345 KEAVWWFEEMRRVGIRPN 362
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
++G DK + ++A +LG V G+++ + K G+ ++F+ N LIG K +G
Sbjct: 107 ENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLG 166
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+ ++FD M KR +V+YNS+IDGY K G + A L + M E
Sbjct: 167 LSRQMFDRMPKR----DSVSYNSMIDGYVKCGLIVSARELFDLMPME 209
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
+ N L+ + Q++ + L+ ++ + G +PD+ T+ + ++A +G V G + +
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
K G +V++ N L+ K I A +FD + + V++NS++ GY G +
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDY----VSWNSMLTGYLHHGLL 277
Query: 263 DKAFNLRERMKKENVE 278
+A ++ M + +E
Sbjct: 278 HEALDIFRLMVQNGIE 293
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE
Length = 838
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
+K L+ T L H+ + G P++ L+ V + DK E+F E+ G P+ T
Sbjct: 703 NKPLAALTTLNHM-KEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFT 761
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
Y ++ G+ + LL+ M RG PN +Y+ L+G L K ++ +A K+ EM
Sbjct: 762 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMV 821
Query: 239 KR 240
K+
Sbjct: 822 KK 823
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 166 EIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKER 225
+++ G P + Y + V G+++K E+ MT +G PNVF YN +I GLC
Sbjct: 714 HMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAG 773
Query: 226 RIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKEN 276
+A L EM R + V Y++L+ K G++ +A + + M K+
Sbjct: 774 EFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
L M + GI P+V Y LI G + A+++F EM + + + TYNS+I G C
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 259 VGEVDKAFNLRERMKKENVEMN 280
GE +A L + M+ N
Sbjct: 772 AGEFREACWLLKEMESRGCNPN 793
>AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: glutamine biosynthetic process; LOCATED IN:
nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G48730.1); Has
17188 Blast hits to 5538 proteins in 167 species: Archae
- 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants -
16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI
BLink). | chr3:19704729-19706417 REVERSE
Length = 497
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Query: 125 ATELYHLIRRDGKF-PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAV 183
A ++++L+R+ + P + L + L + KQ D+ LF + G +P Y +
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 184 QAAVKLGDVNKGIELLESM-TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKL 242
K ++K LE M + +P+VF + VLI CK R + + EM +
Sbjct: 187 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 246
Query: 243 VGSTVTYNSLIDGYCKVG 260
STVTYN++IDGY K G
Sbjct: 247 GCSTVTYNTIIDGYGKAG 264
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%)
Query: 128 LYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAV 187
L +I P + +LN ++ S + + K+ + Q G +PD T+ + +
Sbjct: 273 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFG 332
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
K G K +++ M KR YN++I K RI + +F +M + + +++
Sbjct: 333 KAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSI 392
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
TY SL++ Y K G V K ++ ++ +V ++
Sbjct: 393 TYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLD 425
>AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11938265-11939653 REVERSE
Length = 462
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 116 CCESKMLSEATELY-HLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRP 174
CC + E +L L+ ++ L S +L+ + + ++ L + + D R
Sbjct: 255 CCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRV 314
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
+ Y + + G V K IEL M+ RG+ PN Y VL+ GLCK ++ +A
Sbjct: 315 ESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFL 374
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKE 275
+E+ + Y++L + +VG +DK+ + M ++
Sbjct: 375 NELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRD 415
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%)
Query: 171 GFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDA 230
G + + +T+ + VK D + +L+ M K + ++ Y VLI G ++ +A
Sbjct: 241 GVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEA 300
Query: 231 EKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
E+L M+ +KL + YN +++GY + G V+K L M V N
Sbjct: 301 ERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPN 350
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N LR L + I + I+ G R D+ ++ ++A K+ + +G+EL
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
K + F+ + RI A +FDEM R +V T+N++I+ YC+ G VD
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVV----TWNTMIERYCRFGLVD 194
Query: 264 KAFNLRERMKKENV 277
+AF L E MK NV
Sbjct: 195 EAFKLFEEMKDSNV 208
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 153 DFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVF 212
D+ Q + + +F E+ SG +PD ++ + A LG ++K + + G+ +
Sbjct: 323 DYPQ--EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELS 380
Query: 213 IYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERM 272
I N LI K + +F++M +R +V +++S+I+ GE A +L RM
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPRRNVV----SWSSMINALSMHGEASDALSLFARM 436
Query: 273 KKENVEMN 280
K+ENVE N
Sbjct: 437 KQENVEPN 444
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 125 ATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFR-PDKMTYGKAV 183
AT L++ + P + N ++R+ + VI ++ ++ F PD+ T+
Sbjct: 61 ATRLFNQVSN----PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 184 QAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLV 243
++ LG G ++ + K G R +V N LI K + DA K+FDEMY+R +
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV- 175
Query: 244 GSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+++NSL+ GY ++G++ KA L M + +
Sbjct: 176 ---ISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 140 ALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELL 199
+L S N ++ + I LF E+Q S F P+ +T + A +LG ++ G +
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 200 ESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKV 259
+ + ++++ LIG K I +A +LFD M K+ + VT+N++I GY
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK----NEVTWNTMISGYGLH 499
Query: 260 GEVDKAFNLRERMKKENV 277
G+ +A N+ M +
Sbjct: 500 GQGQEALNIFYEMLNSGI 517
>AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) |
chr4:18395294-18397578 FORWARD
Length = 563
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + + N+LLR+ + D+V LF ++ S PD T+ + A K G + + +
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
L M +P++ +NVLI K++ E+ F + + K + T+NS+I Y K
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGK 325
Query: 259 VGEVDKAFNLRERMKKEN 276
+DKA + ++M N
Sbjct: 326 ARMIDKAEWVFKKMNDMN 343
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 111 LLFSVCCESKMLSEATELYHLIRRDGKF-PALGSLNMLLRSLVDFKQFDKVIELFMEIQD 169
LLF +S + E++ +++ + P G + L+ + Q + LF E+++
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 170 SGFRPDKMTYGKAVQAAVKLGDVNKGIE----LLESMTKRGI---RPNVFIYNVLIGGLC 222
SG RPD Y + A + D K +E L+ M +GI +PNV YN+L+
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFA 219
Query: 223 KERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMK 273
+ ++ LF ++ + T+N ++D Y K G + + + RM+
Sbjct: 220 QSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR 270
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
+ +++++ +Q +GF P+ T+ + A L G ++ + K G+ ++ + + L+
Sbjct: 256 RSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLL 315
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
K I DA ++FD+M ++ + ++ S+IDGY K G ++A L RMK+ +E
Sbjct: 316 DMYAKCGGINDARRVFDQMQEKNVF----SWTSMIDGYGKNGNPEEALELFTRMKEFRIE 371
Query: 279 MN 280
N
Sbjct: 372 PN 373
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N ++ ++ + + E+ + +PD T + + DV KG E+ +
Sbjct: 173 SYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYV 232
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
++GI +V+I + L+ K RI D+E++F +Y R +++NSL+ GY + G
Sbjct: 233 IRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR----DGISWNSLVAGYVQNGRY 288
Query: 263 DKAFNLRERMKKENVE 278
++A L +M V+
Sbjct: 289 NEALRLFRQMVTAKVK 304
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N L+ V ++++ + LF ++ + +P + + + A L ++ G +L +
Sbjct: 274 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 333
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
+ G N+FI + L+ K I A K+FD M V V++ ++I G+ G
Sbjct: 334 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN----VLDEVSWTAIIMGHALHGHG 389
Query: 263 DKAFNLRERMKKENVEMN 280
+A +L E MK++ V+ N
Sbjct: 390 HEAVSLFEEMKRQGVKPN 407
>AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30285358-30286704 REVERSE
Length = 448
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
K ++L+ E++ + D + Y ++A V GI + M +RG PNV +N +I
Sbjct: 242 KAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTII 301
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAF 266
LC++ R+ DA ++ DEM KR ++TY L K E+ F
Sbjct: 302 KLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLF 349
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 3/170 (1%)
Query: 112 LFSVCCESKMLSEATEL---YHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQ 168
L CE K + EA EL ++I N++LR + K E + ++
Sbjct: 157 LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMD 216
Query: 169 DSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIG 228
G D +Y + K G K ++L + M R ++ +V YN +I + + +
Sbjct: 217 TEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVE 276
Query: 229 DAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
++F EM +R + T+N++I C+ G + A+ + + M K +
Sbjct: 277 FGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQ 326
>AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:644458-648421 REVERSE
Length = 852
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + N+LL++ + + EL E++ G P+++T+ + GDV + +
Sbjct: 524 PTTATYNILLKAC--GTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRI 581
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
L +M G RP+V Y I + + + A LF+EM + ++ + VTYN+L+ K
Sbjct: 582 LRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSK 641
Query: 259 VG---EVDKAFNLRERMKKENVEMN 280
G EV + + + M+ + N
Sbjct: 642 YGSLLEVRQCLAIYQDMRNAGYKPN 666
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 134 RDGKFPALGS--LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGD 191
R+ A+ S N+ LR L F + I L+ + SG PD ++ +++ L
Sbjct: 9 RNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSL 68
Query: 192 VNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNS 251
G +L +TK G F+ LI CK + DA K+F+E + + +V YN+
Sbjct: 69 PVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQL--SVCYNA 126
Query: 252 LIDGYCKVGEVDKAFNLRERMKKENVEMN 280
LI GY +V A + RMK+ V ++
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVD 155
>AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30148738-30149931 FORWARD
Length = 397
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N+ ++S + D E++ SG PD +TY + A K G L M
Sbjct: 179 SFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLM 238
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGY 256
+G +PN+ +NV I L RR DA L M K ++ ++TYN +I G+
Sbjct: 239 VLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGF 292
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 188 KLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTV 247
K G V++ ++ + M +R + F +N +I RR+ DAEKLF + V +T+
Sbjct: 40 KSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNSRRLSDAEKLF----RSNPVKNTI 91
Query: 248 TYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
++N+LI GYCK G +AFNL M+ + ++ N
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPN 124
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMT 178
S+ LS+A +L+ R S N L+ + LF E+Q G +P++ T
Sbjct: 72 SRRLSDAEKLF----RSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYT 127
Query: 179 YGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
G ++ L + +G ++ K G +V + N L+ + +RI +AE LF+ M
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
K + VT+ S++ GY + G KA +++E + N
Sbjct: 188 GEK---NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSN 226
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
K IE F +++ G + ++ T+ + A + G+++ + K G + N+++ + LI
Sbjct: 210 KAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALI 269
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
K R + A L + M V V++NS+I G + G + +A ++ RM + +++
Sbjct: 270 DMYAKCREMESARALLEGME----VDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 279 MN 280
++
Sbjct: 326 ID 327
>AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4013166-4014630 REVERSE
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 120 KMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTY 179
K +SE++ Y LI +N ++ + + +Q DKV+ + E+++ +PD +TY
Sbjct: 166 KEISESSLPYRLI----------VMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITY 215
Query: 180 GKAVQAAVKLGDVNKGIELLESMTKR-GIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMY 238
+ + G VN+ + +L +M + + N+ YN ++ G+ K R +++EM
Sbjct: 216 NSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMV 275
Query: 239 KRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ + ++Y ++ID + G V ++ L + MK+ +
Sbjct: 276 QCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQI 314
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N +L + +FD + ++ E+ G PD ++Y + + + G+V + + L + M +
Sbjct: 252 NTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQ 311
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEM 237
R IRP+V++Y LI L K A +L DE+
Sbjct: 312 RQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 159 KVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLI 218
+ + +F + DSG RPD+++ A+ + +L ++ G + + G I N LI
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 219 GGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
K R A ++FD M + + VT+NS++ GY + GEVD A+ E M ++N+
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNK----TVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 145 NMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTK 204
N L+R ++ I LF+ + +SG PDK T+ + A K GI++ + K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 205 RGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDK 264
G ++F+ N L+ + + A K+FDEM +R + V++ S+I GY +
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV----VSWTSMICGYARRDFAKD 218
Query: 265 AFNLRERMKKE 275
A +L RM ++
Sbjct: 219 AVDLFFRMVRD 229
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S L+R L ++F + +++++++ +SG P ++A K+ ++ G +
Sbjct: 340 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 399
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
K G+ V++ L+G + I A+K FD++ ++ +TV++NSL+ GY + GE+
Sbjct: 400 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEK----NTVSWNSLLHGYLESGEL 455
Query: 263 DKAFNLRERM-KKENVEMN 280
D+A + +++ +K+ V N
Sbjct: 456 DEARRVFDKIPEKDAVSWN 474
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 159 KVIELFMEIQDSG-FRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVL 217
+ I LF E+ G P+ T+ A +A L D G ++L KRG+ N + N +
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 218 IGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNL 268
I K R+ DA++ F+ + ++ L V+YN+ +DG C+ ++AF L
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNL----VSYNTFLDGTCRNLNFEQAFKL 461
>AT5G27300.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G27800.1); Has 7681
Blast hits to 2370 proteins in 97 species: Archae - 2;
Bacteria - 0; Metazoa - 93; Fungi - 4; Plants - 7452;
Viruses - 0; Other Eukaryotes - 130 (source: NCBI
BLink). | chr5:9620810-9624990 FORWARD
Length = 575
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 150 SLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRP 209
S ++ + V LF ++ DSG PD A+ VK +N ELL M +G P
Sbjct: 222 SFINHLYMETVRSLFRQMVDSGIEPDVF----ALNCLVKGRTINTR-ELLSEMKGKGFVP 276
Query: 210 NVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLR 269
N YN L+ I DA K EM + V ++Y +L+D C+ G+ D+A L
Sbjct: 277 NGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL 336
Query: 270 ERMKKENV 277
E ++++ +
Sbjct: 337 EMLREKQL 344
>AT5G27300.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G27800.1). |
chr5:9620810-9624990 FORWARD
Length = 550
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 150 SLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRP 209
S ++ + V LF ++ DSG PD A+ VK +N ELL M +G P
Sbjct: 197 SFINHLYMETVRSLFRQMVDSGIEPDVF----ALNCLVKGRTINTR-ELLSEMKGKGFVP 251
Query: 210 NVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLR 269
N YN L+ I DA K EM + V ++Y +L+D C+ G+ D+A L
Sbjct: 252 NGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL 311
Query: 270 ERMKKENV 277
E ++++ +
Sbjct: 312 EMLREKQL 319
>AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8034036-8035292 REVERSE
Length = 418
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 36/195 (18%)
Query: 119 SKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQD--SGFRPDK 176
+ M A +++ + + G + S N LL + + F++V +LF E + PDK
Sbjct: 115 ASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDK 174
Query: 177 MTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDE 236
++YG +++ G K +E++ M +G+ + + ++G L K + +AE L+ E
Sbjct: 175 ISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIE 234
Query: 237 M-----------YKRKLVGS-----------------------TVTYNSLIDGYCKVGEV 262
M Y +L+ + TV+YN L+ YC G +
Sbjct: 235 MVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMM 294
Query: 263 DKAFNLRERMKKENV 277
+A + E +++ N
Sbjct: 295 SEAKKVYEGLEQPNA 309
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 175 DKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLF 234
D +++ + V+ GD+N ++L + M +R +V + ++ G + ++ AE+LF
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMPER----SVVSWTAMVNGCFRSGKVDQAERLF 151
Query: 235 DEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+M V T +NS++ GY + G+VD A L ++M +NV
Sbjct: 152 YQM----PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV 190
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 144 LNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMT 203
N+L+ L F I LF ++ SG D T+ ++ L V+ G +L +
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 204 KRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVD 263
K G + N L+ K +R+ A K+FDEM +R + +++NS+I+GY G +
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV----ISWNSIINGYVSNGLAE 278
Query: 264 KAFNLRERMKKENVEMN 280
K ++ +M +E++
Sbjct: 279 KGLSVFVQMLVSGIEID 295
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 121 MLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYG 180
M+ +A +L+ + +D S +++ L + IE F E++ G + D+ +G
Sbjct: 220 MIEDALQLFRGMEKDSV-----SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 181 KAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKR 240
+ A LG +N+G ++ + + + ++++ + LI CK + + A+ +FD M ++
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 241 KLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+ V++ +++ GY + G ++A + M++ ++
Sbjct: 335 NV----VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 158 DKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVL 217
++ +++F+++Q SG PD T G+A+ A + + +G + G+ V + N L
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSL 412
Query: 218 IGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENV 277
+ K I D+ +LF+EM R V++ +++ Y + G + L ++M + +
Sbjct: 413 VTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 278 E 278
+
Sbjct: 469 K 469
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 139 PALGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIEL 198
P + N +LR + +K + L+ E++ G PD+ T+ ++A KL + G
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 199 LESMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCK 258
+ + G N ++ N LI +G A +LFD+ K V ++S+ GY K
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAK----AHKVAWSSMTSGYAK 190
Query: 259 VGEVDKAFNLRERMK-KENVEMN 280
G++D+A L + M K+ V N
Sbjct: 191 RGKIDEAMRLFDEMPYKDQVAWN 213
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S N ++ + V + + + +F ++ D G +P ++ A+ A LGD+ +G + +
Sbjct: 304 SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
+ G+ NV + N LI CK + + A +F ++ R L V++N++I G+ + G
Sbjct: 364 VELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL----VSWNAMILGFAQNGRP 419
Query: 263 DKAFNLRERMKKENVE 278
A N +M+ V+
Sbjct: 420 IDALNYFSQMRSRTVK 435
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 8/171 (4%)
Query: 108 FSDLLFSVCCESKMLSEATELYHLIRRDGKFPALGSLNMLLRSLVDFKQFDKVIELFMEI 167
F L S+ C + EA ++ I D K L + +L+ DK ++ F+ +
Sbjct: 71 FQTKLVSLFCRYGSVDEAARVFEPI--DSKLNVL--YHTMLKGFAKVSDLDKALQFFVRM 126
Query: 168 QDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERRI 227
+ P + ++ ++ G E+ + K G ++F L K R++
Sbjct: 127 RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQV 186
Query: 228 GDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVE 278
+A K+FD M +R L V++N+++ GY + G A + + M +EN++
Sbjct: 187 NEARKVFDRMPERDL----VSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 141 LGSLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLE 200
L + N ++ V+ + + ++LF + + G RP+ A+ +L + G ++ +
Sbjct: 163 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ 222
Query: 201 SMTKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVG 260
++K + +V LI CK +GDA KLF+ M K+ +V +N++I GY + G
Sbjct: 223 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA----WNAMISGYAQHG 278
Query: 261 EVDKAFNLRERM 272
DKA L M
Sbjct: 279 NADKALCLFREM 290
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 167 IQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESMTKRGIRPNVFIYNVLIGGLCKERR 226
+Q G D TY + ++ + V++G + + G RP +F+ NVLI K
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 227 IGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEVDKAFNLRERMKKENVEMN 280
+ DA +LFD+M +R + +++ ++I Y K KA L M ++NV N
Sbjct: 112 LNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 143 SLNMLLRSLVDFKQFDKVIELFMEIQDSGFRPDKMTYGKAVQAAVKLGDVNKGIELLESM 202
S ++ + K K +EL + + RP+ TY +++ + DV L +
Sbjct: 129 SWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGI 185
Query: 203 TKRGIRPNVFIYNVLIGGLCKERRIGDAEKLFDEMYKRKLVGSTVTYNSLIDGYCKVGEV 262
K G+ +VF+ + LI K DA +FDEM + G + +NS+I G+ +
Sbjct: 186 IKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRS 241
Query: 263 DKAFNLRERMKK 274
D A L +RMK+
Sbjct: 242 DVALELFKRMKR 253