Jatropha Genome Database

JcCA0022221.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0022221.40 - phase: 0 /pseudo/partial
         (124 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60020.1 | Symbols: LAC17, ATLAC17 | LAC17 (laccase 17); lacc...    58   2e-09

>AT5G60020.1 | Symbols: LAC17, ATLAC17 | LAC17 (laccase 17); laccase
           | chr5:24168072-24170223 FORWARD
          Length = 577

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/28 (89%), Positives = 28/28 (100%)

Query: 1   VVLPFNTSVELIMQDTSILGAESHPLHL 28
           +VLP+NTSVEL+MQDTSILGAESHPLHL
Sbjct: 455 MVLPYNTSVELVMQDTSILGAESHPLHL 482