Jatropha Genome Database
- JcCA0020761.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0020761.10 + phase: 2 /partial
(684 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G27030.1 | Symbols: TPR3 | TPR3 (TOPLESS-RELATED 3) | chr5:95... 1058 0.0
AT3G16830.1 | Symbols: TPR2 | TPR2 (TOPLESS-RELATED 2) | chr3:57... 1039 0.0
AT1G80490.1 | Symbols: TPR1 | TPR1 (TOPLESS-RELATED 1) | chr1:30... 843 0.0
AT1G80490.2 | Symbols: TPR1 | TPR1 (TOPLESS-RELATED 1) | chr1:30... 843 0.0
AT1G15750.4 | Symbols: WSIP1, TPL | TPL (TOPLESS); protein bindi... 831 0.0
AT1G15750.3 | Symbols: WSIP1, TPL | TPL (TOPLESS); protein bindi... 831 0.0
AT1G15750.2 | Symbols: WSIP1, TPL | TPL (TOPLESS); protein bindi... 831 0.0
AT1G15750.1 | Symbols: WSIP1, TPL | TPL (TOPLESS); protein bindi... 831 0.0
AT3G15880.2 | Symbols: WSIP2, TPR4 | protein binding | chr3:5364... 810 0.0
AT3G15880.1 | Symbols: WSIP2, TPR4 | protein binding | chr3:5364... 810 0.0
AT2G25420.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 234 1e-61
AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide bindin... 50 5e-06
>AT5G27030.1 | Symbols: TPR3 | TPR3 (TOPLESS-RELATED 3) |
chr5:9508913-9515263 REVERSE
Length = 1108
Score = 1058 bits (2735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/678 (75%), Positives = 574/678 (84%), Gaps = 23/678 (3%)
Query: 7 GVNDLAFAHPNKQLCVVTCGDDKLIKVWDLGGRKLFNFEGHEAPVYSICPHHKESIQFIF 66
VNDLAFA+PN+QLCV+TCGDDKLIKVWD+ GRK F FEGH+APVYSICPH+KE+IQFIF
Sbjct: 454 AVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHFTFEGHDAPVYSICPHYKENIQFIF 513
Query: 67 ATAIDGKIKAWLYDNVGPRVDYDAPGRWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNES 126
+TAIDGKIKAWLYDN+G RVDYDAPG+WCT MLYSADG+RLFSCGTSK+GDSFLVEWNES
Sbjct: 514 STAIDGKIKAWLYDNLGSRVDYDAPGKWCTRMLYSADGTRLFSCGTSKDGDSFLVEWNES 573
Query: 127 EGAIKRHYVGFRKKSTAGVVQFDTTQNHFLAAGEDSQIKFWDMDNTNVLTSTDADGGLPS 186
EG+IKR Y F+KK AGVVQFDT++NHFLA GED QIKFWDM+N NVLTSTDA+GGLP+
Sbjct: 574 EGSIKRTYKEFQKK-LAGVVQFDTSKNHFLAVGEDGQIKFWDMNNINVLTSTDAEGGLPA 632
Query: 187 LPRLRFNKEGNLLAVTTADNGFKILANTAGLRSLRAVETPAFEGLRSPIESAAIKVSGAS 246
LP LRFNK+GNLLAVTTADNGFKILAN AG RSLRA+ETPA E +R+P++ A V GA
Sbjct: 633 LPHLRFNKDGNLLAVTTADNGFKILANPAGFRSLRAMETPASETMRTPVDFKA--VPGAP 690
Query: 247 GVTNVTPVNLKVERSSPVRPSPILNGVDSMNRNMEKPRAVDDVIDKTKPWQLAEILDSGE 306
V VN KVER SPVR S +LNGVD K R +DD DK K WQLAEILD +
Sbjct: 691 ----VASVNCKVERGSPVRHSQMLNGVDP-----SKSR-IDDSTDKPKSWQLAEILDPSQ 740
Query: 307 CRLVTLPDSRDTSSKVVRLLYTNSGVGILALGSNGIQKLWKWTRNDQNPTGKATASAVPQ 366
C TLPD+ +S+KVV+LLYTNSG GILALGSNGIQ+LWKW N+QNP+GKATA+ VPQ
Sbjct: 741 CFQATLPDTAGSSTKVVQLLYTNSGAGILALGSNGIQRLWKWVPNEQNPSGKATATVVPQ 800
Query: 367 HWQPNSGLLMANDVAGVNLEEAVPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFMSP 426
HWQPNSGLLM NDV+GVNLE A PCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFM P
Sbjct: 801 HWQPNSGLLMTNDVSGVNLENAAPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFMPP 860
Query: 427 PPASTFLAFHPQDNNIIAIGMEDSAIHIYNVRVDEVKSKLRGHQKRITGLAFSTNLNILV 486
PPASTFLAFHPQDNN+IAIGMEDS IHIYNVRVDEVKSKL+GHQKRITGLAFST LNILV
Sbjct: 861 PPASTFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILV 920
Query: 487 SSGADAQLCVWSIDTWEKRKSVAIQIPVGKAPVGETRVQFHSDQTRLLVVHETQLAIYDA 546
SSGADAQ+C WSIDTWEKRKSVAIQ+P GKA G+TRVQFH DQ R+LVVHETQLA++DA
Sbjct: 921 SSGADAQICFWSIDTWEKRKSVAIQMPAGKAANGDTRVQFHVDQLRILVVHETQLAVFDA 980
Query: 547 SKMERVRQWLPQDTLSAPLSYAAYSCNSQLIYATFCDGNIGVFDADSLRLRCRIASSAYL 606
SKME +RQW+PQD+LSAP+S A Y+CNSQLIY TF DGNIGVFDADSLRLRCRI+ SAYL
Sbjct: 981 SKMECIRQWIPQDSLSAPISSAVYACNSQLIYTTFRDGNIGVFDADSLRLRCRISPSAYL 1040
Query: 607 SQAVLNGSQSVYPLVVAAHPQEPNQLSIGLTDGSVKVMEPTESEGKWGTTPPVDNGVLNG 666
Q G+Q + PLVVAAHPQ+PNQ ++GL DGSVK+MEPTE EGKWG PP + +N
Sbjct: 1041 PQ----GNQGLSPLVVAAHPQDPNQFAVGLNDGSVKMMEPTEGEGKWGMIPPSE--AINS 1094
Query: 667 RXXXXXXXXNHTPDQLQR 684
N TP+QLQR
Sbjct: 1095 ----PSTTSNQTPEQLQR 1108
>AT3G16830.1 | Symbols: TPR2 | TPR2 (TOPLESS-RELATED 2) |
chr3:5731709-5737531 FORWARD
Length = 1131
Score = 1039 bits (2686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/683 (73%), Positives = 580/683 (84%), Gaps = 13/683 (1%)
Query: 8 VNDLAFAHPNKQLCVVTCGDDKLIKVWDLGGRKLFNFEGHEAPVYSICPHHKESIQFIFA 67
VNDLAFAHPNKQ+CVVTCGDDKLIKVWDL G+KLF FEGHEAPVYSICPH KE+IQFIF+
Sbjct: 456 VNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKLFTFEGHEAPVYSICPHQKENIQFIFS 515
Query: 68 TAIDGKIKAWLYDNVGPRVDYDAPGRWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESE 127
TA+DGKIKAWLYDNVG RVDYDAPG+WCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESE
Sbjct: 516 TALDGKIKAWLYDNVGSRVDYDAPGQWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESE 575
Query: 128 GAIKRHYVGFRKKSTAGVVQFDTTQNHFLAAGEDSQIKFWDMDNTNVLTSTDADGGLPSL 187
GA+KR Y+GFRKKS AGVVQFDTT+N FLA GED+QIKFW+MDNTN+LT +A+GGLP+L
Sbjct: 576 GALKRTYLGFRKKS-AGVVQFDTTRNRFLAVGEDNQIKFWNMDNTNLLTVVEAEGGLPNL 634
Query: 188 PRLRFNKEGNLLAVTTADNGFKILANTAGLRSLRAVETPAFEGLRSPIESAAIKVSGASG 247
PRLRFNK+GNLLAVTTADNGFKILANT GLR+LRA E +FE ++ I+ +KVS ++
Sbjct: 635 PRLRFNKDGNLLAVTTADNGFKILANTDGLRTLRAFEARSFEASKASID---MKVSTSAM 691
Query: 248 VTNVTPVNLKVER---SSPVRPSPILNGVDSMNRNMEKPRAVDDVIDKTKPWQLAEILDS 304
++++P K+E SP RP+PI NG+++M+R MEKPR +D V DK+KP +L EI+D
Sbjct: 692 ASSISPAIGKIEHMDAGSPARPTPIPNGIEAMSRTMEKPRNLDSV-DKSKPLELTEIVDP 750
Query: 305 GECRLVTLPDSRDTSSKVVRLLYTNSGVGILALGSNGIQKLWKWTRNDQNPTGKATASAV 364
+CR VT+PDS+D+ SKV RLLYTNSGVG+LALGSNG+Q+LWKW RN+QNPTGKATAS
Sbjct: 751 TQCRQVTMPDSKDSVSKVARLLYTNSGVGVLALGSNGVQRLWKWIRNEQNPTGKATASVT 810
Query: 365 PQHWQPNSGLLMANDVAGVNLEEAVPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFM 424
PQHWQPNSGLLMANDV N E +VPCIALSKNDSYVMSA GGKVSLFNMMTFKVMTTFM
Sbjct: 811 PQHWQPNSGLLMANDVPE-NPEGSVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFM 869
Query: 425 SPPPASTFLAFHPQDNNIIAIGMEDSAIHIYNVRVDEVKSKLRGHQKRITGLAFSTNLNI 484
PPPASTFLAFHPQDNNIIAIGMEDS+IHIYNVRVDEVK+KL+GHQK ITGLAFST LNI
Sbjct: 870 PPPPASTFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNI 929
Query: 485 LVSSGADAQLCVWSIDTWEKRKSVAIQIPVGKAPVGETRVQFHSDQTRLLVVHETQLAIY 544
LVSSGADAQL W+ D+WEK+KS AIQ+P GKAPVG+TRVQFH+DQ +LLV HETQLAIY
Sbjct: 930 LVSSGADAQLFFWTADSWEKKKSSAIQLPPGKAPVGDTRVQFHNDQIQLLVSHETQLAIY 989
Query: 545 DASKMERVRQWLPQDTLSAPLSYAAYSCNSQLIYATFCDGNIGVFDADSLRLRCRIASSA 604
DASKME + +W+PQ+ LS+P++ A+YSCNSQL+YA+F DGNI VFDA+SLRLRCRIA SA
Sbjct: 990 DASKMECIHKWVPQEALSSPITSASYSCNSQLVYASFADGNIAVFDAESLRLRCRIAPSA 1049
Query: 605 YLSQAVLNGSQSVYPLVVAAHPQEPNQLSIGLTDGSVKVMEPTESEGKWGTTPPVDN--- 661
Y+ Q N S ++P V+ AHPQEPNQL++GL+DGSVKV+EP+E +WG +
Sbjct: 1050 YMPQPTPN-SAPIFPQVITAHPQEPNQLAVGLSDGSVKVIEPSELSRRWGVGVAAGSDKA 1108
Query: 662 GVLNGRXXXXXXXXNHTPDQLQR 684
G NGR N + DQ+QR
Sbjct: 1109 GTENGRPSSSSAANNSSSDQIQR 1131
>AT1G80490.1 | Symbols: TPR1 | TPR1 (TOPLESS-RELATED 1) |
chr1:30261094-30266446 REVERSE
Length = 1119
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/659 (62%), Positives = 499/659 (75%), Gaps = 26/659 (3%)
Query: 7 GVNDLAFAHPNKQLCVVTCGDDKLIKVWDLG-GRKLFNFEGHEAPVYSICPHHKESIQFI 65
GVND+AF+ PNKQLCV TCGDDK IKVWD G K + FEGHEAPVYSICPH+KE+IQFI
Sbjct: 463 GVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFI 522
Query: 66 FATAIDGKIKAWLYDNVGPRVDYDAPGRWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNE 125
F+TA+DGKIKAWLYDN+G RVDY+APGRWCTTM YSADG+RLFSCGTSK+G+SF+VEWNE
Sbjct: 523 FSTALDGKIKAWLYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNE 582
Query: 126 SEGAIKRHYVGFRKKSTAGVVQFDTTQNHFLAAGEDSQIKFWDMDNTNVLTSTDADGGLP 185
SEGA+KR Y GF K+S GVVQFDTT+N +LAAG+D IKFWDMD +LT+ DADGGL
Sbjct: 583 SEGAVKRTYQGFHKRSL-GVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQ 641
Query: 186 SLPRLRFNKEGNLLAVTTADNGFKILANTAGLRSLRAVETPAFEGLRSPIESAAIKVSGA 245
+ PR+RFNKEG+LLAV+ DN K++AN+ GLR L VE + E + I S +
Sbjct: 642 ASPRIRFNKEGSLLAVSANDNMIKVMANSDGLRLLHTVENLSSESSKPAINSIPM----- 696
Query: 246 SGVTNVTPVNLKVERSSPVRPSPILNGVDSMNRNMEKPRAVDDVIDKTKPWQLAEILDSG 305
VER + V P +NG DS N KP ++ DK+K W+L E+ +
Sbjct: 697 ------------VERPASVVSIPGMNG-DSRNMVDVKPVITEESNDKSKVWKLTEVGEPS 743
Query: 306 ECRLVTLPDSRDTSSKVVRLLYTNSGVGILALGSNGIQKLWKWTRNDQNPTGKATASAVP 365
+CR + LP++ + K+ RL++TNSG ILAL SN I LWKW RND+N TGKATAS P
Sbjct: 744 QCRSLRLPENMRVT-KISRLIFTNSGNAILALASNAIHLLWKWQRNDRNATGKATASLPP 802
Query: 366 QHWQPNSGLLMANDVAGVNLEEAVPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFMS 425
Q WQP SG+LM NDVA N EEAVPC ALSKNDSYVMSA+GGK+SLFNMMTFK M TFM
Sbjct: 803 QQWQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMP 862
Query: 426 PPPASTFLAFHPQDNNIIAIGMEDSAIHIYNVRVDEVKSKLRGHQKRITGLAFSTNLNIL 485
PPPA+TFLAFHPQDNNIIAIGM+DS I IYNVRVDEVKSKL+GH KRITGLAFS LN+L
Sbjct: 863 PPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVL 922
Query: 486 VSSGADAQLCVWSIDTWEKRKSVAIQIPVGK--APVGETRVQFHSDQTRLLVVHETQLAI 543
VSSGADAQLCVW+ D WEK+KS +QIP G+ + + +TRVQFH DQ LVVHETQLAI
Sbjct: 923 VSSGADAQLCVWNTDGWEKQKSKVLQIPQGRSTSSLSDTRVQFHQDQVHFLVVHETQLAI 982
Query: 544 YDASKMERVRQWLPQDTLSAPLSYAAYSCNSQLIYATFCDGNIGVFDADSLRLRCRIASS 603
Y+ +K+E ++QW P +AP+++A +SC+SQLIY +F D I VF + +LRLRCR+ S
Sbjct: 983 YETTKLECMKQW-PVRESAAPITHATFSCDSQLIYTSFMDATICVFSSANLRLRCRVNPS 1041
Query: 604 AYLSQAVLNGSQSVYPLVVAAHPQEPNQLSIGLTDGSVKVMEPTESEGKWGTTPPVDNG 662
AYL ++ N +V+PLV+AAHPQE N ++GL+DG V + EP ESEGKWG PP +NG
Sbjct: 1042 AYLPASLSNS--NVHPLVIAAHPQESNMFAVGLSDGGVHIFEPLESEGKWGVAPPPENG 1098
>AT1G80490.2 | Symbols: TPR1 | TPR1 (TOPLESS-RELATED 1) |
chr1:30261094-30266446 REVERSE
Length = 1120
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/659 (62%), Positives = 499/659 (75%), Gaps = 26/659 (3%)
Query: 7 GVNDLAFAHPNKQLCVVTCGDDKLIKVWDLG-GRKLFNFEGHEAPVYSICPHHKESIQFI 65
GVND+AF+ PNKQLCV TCGDDK IKVWD G K + FEGHEAPVYSICPH+KE+IQFI
Sbjct: 464 GVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFI 523
Query: 66 FATAIDGKIKAWLYDNVGPRVDYDAPGRWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNE 125
F+TA+DGKIKAWLYDN+G RVDY+APGRWCTTM YSADG+RLFSCGTSK+G+SF+VEWNE
Sbjct: 524 FSTALDGKIKAWLYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNE 583
Query: 126 SEGAIKRHYVGFRKKSTAGVVQFDTTQNHFLAAGEDSQIKFWDMDNTNVLTSTDADGGLP 185
SEGA+KR Y GF K+S GVVQFDTT+N +LAAG+D IKFWDMD +LT+ DADGGL
Sbjct: 584 SEGAVKRTYQGFHKRSL-GVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQ 642
Query: 186 SLPRLRFNKEGNLLAVTTADNGFKILANTAGLRSLRAVETPAFEGLRSPIESAAIKVSGA 245
+ PR+RFNKEG+LLAV+ DN K++AN+ GLR L VE + E + I S +
Sbjct: 643 ASPRIRFNKEGSLLAVSANDNMIKVMANSDGLRLLHTVENLSSESSKPAINSIPM----- 697
Query: 246 SGVTNVTPVNLKVERSSPVRPSPILNGVDSMNRNMEKPRAVDDVIDKTKPWQLAEILDSG 305
VER + V P +NG DS N KP ++ DK+K W+L E+ +
Sbjct: 698 ------------VERPASVVSIPGMNG-DSRNMVDVKPVITEESNDKSKVWKLTEVGEPS 744
Query: 306 ECRLVTLPDSRDTSSKVVRLLYTNSGVGILALGSNGIQKLWKWTRNDQNPTGKATASAVP 365
+CR + LP++ + K+ RL++TNSG ILAL SN I LWKW RND+N TGKATAS P
Sbjct: 745 QCRSLRLPENMRVT-KISRLIFTNSGNAILALASNAIHLLWKWQRNDRNATGKATASLPP 803
Query: 366 QHWQPNSGLLMANDVAGVNLEEAVPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFMS 425
Q WQP SG+LM NDVA N EEAVPC ALSKNDSYVMSA+GGK+SLFNMMTFK M TFM
Sbjct: 804 QQWQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMP 863
Query: 426 PPPASTFLAFHPQDNNIIAIGMEDSAIHIYNVRVDEVKSKLRGHQKRITGLAFSTNLNIL 485
PPPA+TFLAFHPQDNNIIAIGM+DS I IYNVRVDEVKSKL+GH KRITGLAFS LN+L
Sbjct: 864 PPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVL 923
Query: 486 VSSGADAQLCVWSIDTWEKRKSVAIQIPVGK--APVGETRVQFHSDQTRLLVVHETQLAI 543
VSSGADAQLCVW+ D WEK+KS +QIP G+ + + +TRVQFH DQ LVVHETQLAI
Sbjct: 924 VSSGADAQLCVWNTDGWEKQKSKVLQIPQGRSTSSLSDTRVQFHQDQVHFLVVHETQLAI 983
Query: 544 YDASKMERVRQWLPQDTLSAPLSYAAYSCNSQLIYATFCDGNIGVFDADSLRLRCRIASS 603
Y+ +K+E ++QW P +AP+++A +SC+SQLIY +F D I VF + +LRLRCR+ S
Sbjct: 984 YETTKLECMKQW-PVRESAAPITHATFSCDSQLIYTSFMDATICVFSSANLRLRCRVNPS 1042
Query: 604 AYLSQAVLNGSQSVYPLVVAAHPQEPNQLSIGLTDGSVKVMEPTESEGKWGTTPPVDNG 662
AYL ++ N +V+PLV+AAHPQE N ++GL+DG V + EP ESEGKWG PP +NG
Sbjct: 1043 AYLPASLSNS--NVHPLVIAAHPQESNMFAVGLSDGGVHIFEPLESEGKWGVAPPPENG 1099
>AT1G15750.4 | Symbols: WSIP1, TPL | TPL (TOPLESS); protein binding /
protein homodimerization/ transcription repressor |
chr1:5415086-5420359 REVERSE
Length = 1131
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/664 (61%), Positives = 506/664 (76%), Gaps = 17/664 (2%)
Query: 7 GVNDLAFAHPNKQLCVVTCGDDKLIKVWDLG-GRKLFNFEGHEAPVYSICPHHKESIQFI 65
GVND++F+ PNKQLCV+TCGDDK IKVWD G K FEGHEAPVYS+CPH+KE+IQFI
Sbjct: 464 GVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFI 523
Query: 66 FATAIDGKIKAWLYDNVGPRVDYDAPGRWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNE 125
F+TA+DGKIKAWLYDN+G RVDYDAPGRWCTTM YSADG+RLFSCGTSK+G+SF+VEWNE
Sbjct: 524 FSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNE 583
Query: 126 SEGAIKRHYVGFRKKSTAGVVQFDTTQNHFLAAGEDSQIKFWDMDNTNVLTSTDADGGLP 185
SEGA+KR Y GF K+S GVVQFDTT+N +LAAG+D IKFWDMD +LT+ D DGGL
Sbjct: 584 SEGAVKRTYQGFHKRSL-GVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQ 642
Query: 186 SLPRLRFNKEGNLLAVTTADNGFKILANTAGLRSLRAVETPAFEGLRSPIESAAIKVSGA 245
+ PR+RFNKEG+LLAV+ +N KI+AN+ GLR L E + E + I S I + A
Sbjct: 643 ASPRIRFNKEGSLLAVSGNENVIKIMANSDGLRLLHTFENISSESSKPAINS--IAAAAA 700
Query: 246 SGVTNVTPVNLKVERSSPVRPSPILNGVDSMNRNMEKPRAVDDVIDKTKPWQLAEILDSG 305
+ T+ +RS+ V +NG DS N KP ++ DK+K W+L E+ +
Sbjct: 701 AAATSAG----HADRSANVVSIQGMNG-DSRNMVDVKPVITEESNDKSKIWKLTEVSEPS 755
Query: 306 ECRLVTLPDSRDTSSKVVRLLYTNSGVGILALGSNGIQKLWKWTRNDQNPTGKATASAVP 365
+CR + LP++ + K+ RL++TNSG ILAL SN I LWKW RN++N TGKATAS P
Sbjct: 756 QCRSLRLPENLRVA-KISRLIFTNSGNAILALASNAIHLLWKWQRNERNATGKATASLPP 814
Query: 366 QHWQPNSGLLMANDVAGVNLEEAVPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFMS 425
Q WQP SG+LM NDVA N EEAVPC ALSKNDSYVMSA+GGK+SLFNMMTFK M TFM
Sbjct: 815 QQWQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMP 874
Query: 426 PPPASTFLAFHPQDNNIIAIGMEDSAIHIYNVRVDEVKSKLRGHQKRITGLAFSTNLNIL 485
PPPA+TFLAFHPQDNNIIAIGM+DS I IYNVRVDEVKSKL+GH KRITGLAFS LN+L
Sbjct: 875 PPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVL 934
Query: 486 VSSGADAQLCVWSIDTWEKRKSVAIQIPVGK---APVGETRVQFHSDQTRLLVVHETQLA 542
VSSGADAQLCVW+ D WEK++S + +P G+ AP +TRVQFH DQ LVVHETQLA
Sbjct: 935 VSSGADAQLCVWNTDGWEKQRSKVLPLPQGRPNSAP-SDTRVQFHQDQAHFLVVHETQLA 993
Query: 543 IYDASKMERVRQWLPQDTLSAPLSYAAYSCNSQLIYATFCDGNIGVFDADSLRLRCRIAS 602
IY+ +K+E ++QW +++L AP+++A +SC+SQL+YA+F D + VF + +LRLRCR+
Sbjct: 994 IYETTKLECMKQWAVRESL-APITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNP 1052
Query: 603 SAYLSQAVLNGSQSVYPLVVAAHPQEPNQLSIGLTDGSVKVMEPTESEGKWGTTPPVDNG 662
SAYL ++ N +V+PLV+AAHPQEPN ++GL+DG V + EP ESEGKWG PP +NG
Sbjct: 1053 SAYLPASLSNS--NVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESEGKWGVAPPAENG 1110
Query: 663 VLNG 666
+G
Sbjct: 1111 SASG 1114
>AT1G15750.3 | Symbols: WSIP1, TPL | TPL (TOPLESS); protein binding /
protein homodimerization/ transcription repressor |
chr1:5415086-5420359 REVERSE
Length = 1131
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/664 (61%), Positives = 506/664 (76%), Gaps = 17/664 (2%)
Query: 7 GVNDLAFAHPNKQLCVVTCGDDKLIKVWDLG-GRKLFNFEGHEAPVYSICPHHKESIQFI 65
GVND++F+ PNKQLCV+TCGDDK IKVWD G K FEGHEAPVYS+CPH+KE+IQFI
Sbjct: 464 GVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFI 523
Query: 66 FATAIDGKIKAWLYDNVGPRVDYDAPGRWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNE 125
F+TA+DGKIKAWLYDN+G RVDYDAPGRWCTTM YSADG+RLFSCGTSK+G+SF+VEWNE
Sbjct: 524 FSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNE 583
Query: 126 SEGAIKRHYVGFRKKSTAGVVQFDTTQNHFLAAGEDSQIKFWDMDNTNVLTSTDADGGLP 185
SEGA+KR Y GF K+S GVVQFDTT+N +LAAG+D IKFWDMD +LT+ D DGGL
Sbjct: 584 SEGAVKRTYQGFHKRSL-GVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQ 642
Query: 186 SLPRLRFNKEGNLLAVTTADNGFKILANTAGLRSLRAVETPAFEGLRSPIESAAIKVSGA 245
+ PR+RFNKEG+LLAV+ +N KI+AN+ GLR L E + E + I S I + A
Sbjct: 643 ASPRIRFNKEGSLLAVSGNENVIKIMANSDGLRLLHTFENISSESSKPAINS--IAAAAA 700
Query: 246 SGVTNVTPVNLKVERSSPVRPSPILNGVDSMNRNMEKPRAVDDVIDKTKPWQLAEILDSG 305
+ T+ +RS+ V +NG DS N KP ++ DK+K W+L E+ +
Sbjct: 701 AAATSAG----HADRSANVVSIQGMNG-DSRNMVDVKPVITEESNDKSKIWKLTEVSEPS 755
Query: 306 ECRLVTLPDSRDTSSKVVRLLYTNSGVGILALGSNGIQKLWKWTRNDQNPTGKATASAVP 365
+CR + LP++ + K+ RL++TNSG ILAL SN I LWKW RN++N TGKATAS P
Sbjct: 756 QCRSLRLPENLRVA-KISRLIFTNSGNAILALASNAIHLLWKWQRNERNATGKATASLPP 814
Query: 366 QHWQPNSGLLMANDVAGVNLEEAVPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFMS 425
Q WQP SG+LM NDVA N EEAVPC ALSKNDSYVMSA+GGK+SLFNMMTFK M TFM
Sbjct: 815 QQWQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMP 874
Query: 426 PPPASTFLAFHPQDNNIIAIGMEDSAIHIYNVRVDEVKSKLRGHQKRITGLAFSTNLNIL 485
PPPA+TFLAFHPQDNNIIAIGM+DS I IYNVRVDEVKSKL+GH KRITGLAFS LN+L
Sbjct: 875 PPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVL 934
Query: 486 VSSGADAQLCVWSIDTWEKRKSVAIQIPVGK---APVGETRVQFHSDQTRLLVVHETQLA 542
VSSGADAQLCVW+ D WEK++S + +P G+ AP +TRVQFH DQ LVVHETQLA
Sbjct: 935 VSSGADAQLCVWNTDGWEKQRSKVLPLPQGRPNSAP-SDTRVQFHQDQAHFLVVHETQLA 993
Query: 543 IYDASKMERVRQWLPQDTLSAPLSYAAYSCNSQLIYATFCDGNIGVFDADSLRLRCRIAS 602
IY+ +K+E ++QW +++L AP+++A +SC+SQL+YA+F D + VF + +LRLRCR+
Sbjct: 994 IYETTKLECMKQWAVRESL-APITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNP 1052
Query: 603 SAYLSQAVLNGSQSVYPLVVAAHPQEPNQLSIGLTDGSVKVMEPTESEGKWGTTPPVDNG 662
SAYL ++ N +V+PLV+AAHPQEPN ++GL+DG V + EP ESEGKWG PP +NG
Sbjct: 1053 SAYLPASLSNS--NVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESEGKWGVAPPAENG 1110
Query: 663 VLNG 666
+G
Sbjct: 1111 SASG 1114
>AT1G15750.2 | Symbols: WSIP1, TPL | TPL (TOPLESS); protein binding /
protein homodimerization/ transcription repressor |
chr1:5415086-5420359 REVERSE
Length = 1131
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/664 (61%), Positives = 506/664 (76%), Gaps = 17/664 (2%)
Query: 7 GVNDLAFAHPNKQLCVVTCGDDKLIKVWDLG-GRKLFNFEGHEAPVYSICPHHKESIQFI 65
GVND++F+ PNKQLCV+TCGDDK IKVWD G K FEGHEAPVYS+CPH+KE+IQFI
Sbjct: 464 GVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFI 523
Query: 66 FATAIDGKIKAWLYDNVGPRVDYDAPGRWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNE 125
F+TA+DGKIKAWLYDN+G RVDYDAPGRWCTTM YSADG+RLFSCGTSK+G+SF+VEWNE
Sbjct: 524 FSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNE 583
Query: 126 SEGAIKRHYVGFRKKSTAGVVQFDTTQNHFLAAGEDSQIKFWDMDNTNVLTSTDADGGLP 185
SEGA+KR Y GF K+S GVVQFDTT+N +LAAG+D IKFWDMD +LT+ D DGGL
Sbjct: 584 SEGAVKRTYQGFHKRSL-GVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQ 642
Query: 186 SLPRLRFNKEGNLLAVTTADNGFKILANTAGLRSLRAVETPAFEGLRSPIESAAIKVSGA 245
+ PR+RFNKEG+LLAV+ +N KI+AN+ GLR L E + E + I S I + A
Sbjct: 643 ASPRIRFNKEGSLLAVSGNENVIKIMANSDGLRLLHTFENISSESSKPAINS--IAAAAA 700
Query: 246 SGVTNVTPVNLKVERSSPVRPSPILNGVDSMNRNMEKPRAVDDVIDKTKPWQLAEILDSG 305
+ T+ +RS+ V +NG DS N KP ++ DK+K W+L E+ +
Sbjct: 701 AAATSAG----HADRSANVVSIQGMNG-DSRNMVDVKPVITEESNDKSKIWKLTEVSEPS 755
Query: 306 ECRLVTLPDSRDTSSKVVRLLYTNSGVGILALGSNGIQKLWKWTRNDQNPTGKATASAVP 365
+CR + LP++ + K+ RL++TNSG ILAL SN I LWKW RN++N TGKATAS P
Sbjct: 756 QCRSLRLPENLRVA-KISRLIFTNSGNAILALASNAIHLLWKWQRNERNATGKATASLPP 814
Query: 366 QHWQPNSGLLMANDVAGVNLEEAVPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFMS 425
Q WQP SG+LM NDVA N EEAVPC ALSKNDSYVMSA+GGK+SLFNMMTFK M TFM
Sbjct: 815 QQWQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMP 874
Query: 426 PPPASTFLAFHPQDNNIIAIGMEDSAIHIYNVRVDEVKSKLRGHQKRITGLAFSTNLNIL 485
PPPA+TFLAFHPQDNNIIAIGM+DS I IYNVRVDEVKSKL+GH KRITGLAFS LN+L
Sbjct: 875 PPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVL 934
Query: 486 VSSGADAQLCVWSIDTWEKRKSVAIQIPVGK---APVGETRVQFHSDQTRLLVVHETQLA 542
VSSGADAQLCVW+ D WEK++S + +P G+ AP +TRVQFH DQ LVVHETQLA
Sbjct: 935 VSSGADAQLCVWNTDGWEKQRSKVLPLPQGRPNSAP-SDTRVQFHQDQAHFLVVHETQLA 993
Query: 543 IYDASKMERVRQWLPQDTLSAPLSYAAYSCNSQLIYATFCDGNIGVFDADSLRLRCRIAS 602
IY+ +K+E ++QW +++L AP+++A +SC+SQL+YA+F D + VF + +LRLRCR+
Sbjct: 994 IYETTKLECMKQWAVRESL-APITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNP 1052
Query: 603 SAYLSQAVLNGSQSVYPLVVAAHPQEPNQLSIGLTDGSVKVMEPTESEGKWGTTPPVDNG 662
SAYL ++ N +V+PLV+AAHPQEPN ++GL+DG V + EP ESEGKWG PP +NG
Sbjct: 1053 SAYLPASLSNS--NVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESEGKWGVAPPAENG 1110
Query: 663 VLNG 666
+G
Sbjct: 1111 SASG 1114
>AT1G15750.1 | Symbols: WSIP1, TPL | TPL (TOPLESS); protein binding /
protein homodimerization/ transcription repressor |
chr1:5415086-5420359 REVERSE
Length = 1131
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/664 (61%), Positives = 506/664 (76%), Gaps = 17/664 (2%)
Query: 7 GVNDLAFAHPNKQLCVVTCGDDKLIKVWDLG-GRKLFNFEGHEAPVYSICPHHKESIQFI 65
GVND++F+ PNKQLCV+TCGDDK IKVWD G K FEGHEAPVYS+CPH+KE+IQFI
Sbjct: 464 GVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFI 523
Query: 66 FATAIDGKIKAWLYDNVGPRVDYDAPGRWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNE 125
F+TA+DGKIKAWLYDN+G RVDYDAPGRWCTTM YSADG+RLFSCGTSK+G+SF+VEWNE
Sbjct: 524 FSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNE 583
Query: 126 SEGAIKRHYVGFRKKSTAGVVQFDTTQNHFLAAGEDSQIKFWDMDNTNVLTSTDADGGLP 185
SEGA+KR Y GF K+S GVVQFDTT+N +LAAG+D IKFWDMD +LT+ D DGGL
Sbjct: 584 SEGAVKRTYQGFHKRSL-GVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQ 642
Query: 186 SLPRLRFNKEGNLLAVTTADNGFKILANTAGLRSLRAVETPAFEGLRSPIESAAIKVSGA 245
+ PR+RFNKEG+LLAV+ +N KI+AN+ GLR L E + E + I S I + A
Sbjct: 643 ASPRIRFNKEGSLLAVSGNENVIKIMANSDGLRLLHTFENISSESSKPAINS--IAAAAA 700
Query: 246 SGVTNVTPVNLKVERSSPVRPSPILNGVDSMNRNMEKPRAVDDVIDKTKPWQLAEILDSG 305
+ T+ +RS+ V +NG DS N KP ++ DK+K W+L E+ +
Sbjct: 701 AAATSAG----HADRSANVVSIQGMNG-DSRNMVDVKPVITEESNDKSKIWKLTEVSEPS 755
Query: 306 ECRLVTLPDSRDTSSKVVRLLYTNSGVGILALGSNGIQKLWKWTRNDQNPTGKATASAVP 365
+CR + LP++ + K+ RL++TNSG ILAL SN I LWKW RN++N TGKATAS P
Sbjct: 756 QCRSLRLPENLRVA-KISRLIFTNSGNAILALASNAIHLLWKWQRNERNATGKATASLPP 814
Query: 366 QHWQPNSGLLMANDVAGVNLEEAVPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFMS 425
Q WQP SG+LM NDVA N EEAVPC ALSKNDSYVMSA+GGK+SLFNMMTFK M TFM
Sbjct: 815 QQWQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMP 874
Query: 426 PPPASTFLAFHPQDNNIIAIGMEDSAIHIYNVRVDEVKSKLRGHQKRITGLAFSTNLNIL 485
PPPA+TFLAFHPQDNNIIAIGM+DS I IYNVRVDEVKSKL+GH KRITGLAFS LN+L
Sbjct: 875 PPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVL 934
Query: 486 VSSGADAQLCVWSIDTWEKRKSVAIQIPVGK---APVGETRVQFHSDQTRLLVVHETQLA 542
VSSGADAQLCVW+ D WEK++S + +P G+ AP +TRVQFH DQ LVVHETQLA
Sbjct: 935 VSSGADAQLCVWNTDGWEKQRSKVLPLPQGRPNSAP-SDTRVQFHQDQAHFLVVHETQLA 993
Query: 543 IYDASKMERVRQWLPQDTLSAPLSYAAYSCNSQLIYATFCDGNIGVFDADSLRLRCRIAS 602
IY+ +K+E ++QW +++L AP+++A +SC+SQL+YA+F D + VF + +LRLRCR+
Sbjct: 994 IYETTKLECMKQWAVRESL-APITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNP 1052
Query: 603 SAYLSQAVLNGSQSVYPLVVAAHPQEPNQLSIGLTDGSVKVMEPTESEGKWGTTPPVDNG 662
SAYL ++ N +V+PLV+AAHPQEPN ++GL+DG V + EP ESEGKWG PP +NG
Sbjct: 1053 SAYLPASLSNS--NVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESEGKWGVAPPAENG 1110
Query: 663 VLNG 666
+G
Sbjct: 1111 SASG 1114
>AT3G15880.2 | Symbols: WSIP2, TPR4 | protein binding |
chr3:5364454-5371869 REVERSE
Length = 1137
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/661 (60%), Positives = 499/661 (75%), Gaps = 14/661 (2%)
Query: 8 VNDLAFAHPNKQLCVVTCGDDKLIKVWD-LGGRKLFNFEGHEAPVYSICPHHKESIQFIF 66
VNDLAF+ PN+QLCVVTCG+DK IKVWD + G KL FEGHEAPVYS+CPH KE+IQFIF
Sbjct: 467 VNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIF 526
Query: 67 ATAIDGKIKAWLYDNVGPRVDYDAPGRWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNES 126
+TA+DGKIKAWLYDN+G RVDYDAPGR CT+M Y ADG+RLFSCGTSKEG+SF+VEWNES
Sbjct: 527 STAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNES 586
Query: 127 EGAIKRHYVGFRKKSTAGVVQFDTTQNHFLAAGEDSQIKFWDMDNTNVLTSTDADGGLPS 186
EGA+KR Y+G K+S GVVQFDT +N FL AG++ Q+KFWDMD+ ++L+ST A+GGLPS
Sbjct: 587 EGAVKRTYLGLGKRSV-GVVQFDTMKNKFLVAGDEFQVKFWDMDSVDLLSSTAAEGGLPS 645
Query: 187 LPRLRFNKEGNLLAVTTADNGFKILANTAGLRSLRAVETPAFEGLRSPIESAAI-KVSGA 245
P LR NKEG LLAV+T DNG KILAN G R L ++ + R+P S A + G
Sbjct: 646 SPCLRINKEGTLLAVSTTDNGIKILANAEGSRILHSMANRGLDSSRAPPGSVAKGPIVGT 705
Query: 246 SGVTNV-TPVNLKV-ERSSPVRPSPILNGVDSMNRNMEKPRAVDDVIDKTKPWQLAEILD 303
G N T ++L + ERS PV LNG D+ + KPR DD +K+K W+L EI +
Sbjct: 706 FGTPNSSTGMSLSMGERSGPVASVTGLNG-DNRSLPDVKPRIADDA-EKSKTWKLTEISE 763
Query: 304 SGECRLVTLPDSRDTSSKVVRLLYTNSGVGILALGSNGIQKLWKWTRNDQNPTGKATASA 363
+ R + LPD+ ++VV+L+YTNSG ILAL N KLWKW ++++N GKA ++
Sbjct: 764 RSQLRTLRLPDTL-LPARVVKLIYTNSGGAILALAENAAHKLWKWQKSERNLLGKANSNV 822
Query: 364 VPQHWQPNSGLLMANDVAGVNLEEAVPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTF 423
PQ WQP+SG+LM ND N E+ VPC ALSKNDSYVMSA+GGK+SLFNMMTFK MTTF
Sbjct: 823 PPQLWQPSSGVLMTNDTREGNKEDVVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTF 882
Query: 424 MSPPPASTFLAFHPQDNNIIAIGMEDSAIHIYNVRVDEVKSKLRGHQKRITGLAFSTNLN 483
M+PPPA+T LAFHPQDNNIIAIGM+DS+I IYNVRVDEVKSKL+GHQKR+TGLAFS LN
Sbjct: 883 MAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLN 942
Query: 484 ILVSSGADAQLCVWSIDTWEKRKSVAIQIPVGKA--PVGETRVQFHSDQTRLLVVHETQL 541
+LVSSGAD+QLCVWS+D WEK+ S IQIP G + P+ TRVQFH DQ +LVVH +QL
Sbjct: 943 VLVSSGADSQLCVWSMDGWEKQASKQIQIPSGHSPNPLAHTRVQFHQDQIHVLVVHASQL 1002
Query: 542 AIYDASKMERVRQWLPQDTLSAPLSYAAYSCNSQLIYATFCDGNIGVFDADSLRLRCRIA 601
AIY+A K+E ++QW+P+++ S ++ A YSC+SQ IYA F DG++ + A +L+L+CRI
Sbjct: 1003 AIYEAPKLENMKQWIPKES-SGSVTDAVYSCDSQSIYAAFDDGSVSILTATTLQLKCRIG 1061
Query: 602 SSAYLSQAVLNGSQSVYPLVVAAHPQEPNQLSIGLTDGSVKVMEPTESEGKWGTTPPVDN 661
++YL N S VYP VAAHP EPNQ ++GLTDG V V+EP EGKWG + P +N
Sbjct: 1062 PNSYLPS---NPSSRVYPATVAAHPSEPNQFAVGLTDGGVHVIEPPGPEGKWGISAPPEN 1118
Query: 662 G 662
G
Sbjct: 1119 G 1119
>AT3G15880.1 | Symbols: WSIP2, TPR4 | protein binding |
chr3:5364792-5371869 REVERSE
Length = 1135
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/661 (60%), Positives = 499/661 (75%), Gaps = 14/661 (2%)
Query: 8 VNDLAFAHPNKQLCVVTCGDDKLIKVWD-LGGRKLFNFEGHEAPVYSICPHHKESIQFIF 66
VNDLAF+ PN+QLCVVTCG+DK IKVWD + G KL FEGHEAPVYS+CPH KE+IQFIF
Sbjct: 467 VNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIF 526
Query: 67 ATAIDGKIKAWLYDNVGPRVDYDAPGRWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNES 126
+TA+DGKIKAWLYDN+G RVDYDAPGR CT+M Y ADG+RLFSCGTSKEG+SF+VEWNES
Sbjct: 527 STAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNES 586
Query: 127 EGAIKRHYVGFRKKSTAGVVQFDTTQNHFLAAGEDSQIKFWDMDNTNVLTSTDADGGLPS 186
EGA+KR Y+G K+S GVVQFDT +N FL AG++ Q+KFWDMD+ ++L+ST A+GGLPS
Sbjct: 587 EGAVKRTYLGLGKRSV-GVVQFDTMKNKFLVAGDEFQVKFWDMDSVDLLSSTAAEGGLPS 645
Query: 187 LPRLRFNKEGNLLAVTTADNGFKILANTAGLRSLRAVETPAFEGLRSPIESAAI-KVSGA 245
P LR NKEG LLAV+T DNG KILAN G R L ++ + R+P S A + G
Sbjct: 646 SPCLRINKEGTLLAVSTTDNGIKILANAEGSRILHSMANRGLDSSRAPPGSVAKGPIVGT 705
Query: 246 SGVTNV-TPVNLKV-ERSSPVRPSPILNGVDSMNRNMEKPRAVDDVIDKTKPWQLAEILD 303
G N T ++L + ERS PV LNG D+ + KPR DD +K+K W+L EI +
Sbjct: 706 FGTPNSSTGMSLSMGERSGPVASVTGLNG-DNRSLPDVKPRIADDA-EKSKTWKLTEISE 763
Query: 304 SGECRLVTLPDSRDTSSKVVRLLYTNSGVGILALGSNGIQKLWKWTRNDQNPTGKATASA 363
+ R + LPD+ ++VV+L+YTNSG ILAL N KLWKW ++++N GKA ++
Sbjct: 764 RSQLRTLRLPDTL-LPARVVKLIYTNSGGAILALAENAAHKLWKWQKSERNLLGKANSNV 822
Query: 364 VPQHWQPNSGLLMANDVAGVNLEEAVPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTF 423
PQ WQP+SG+LM ND N E+ VPC ALSKNDSYVMSA+GGK+SLFNMMTFK MTTF
Sbjct: 823 PPQLWQPSSGVLMTNDTREGNKEDVVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTF 882
Query: 424 MSPPPASTFLAFHPQDNNIIAIGMEDSAIHIYNVRVDEVKSKLRGHQKRITGLAFSTNLN 483
M+PPPA+T LAFHPQDNNIIAIGM+DS+I IYNVRVDEVKSKL+GHQKR+TGLAFS LN
Sbjct: 883 MAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLN 942
Query: 484 ILVSSGADAQLCVWSIDTWEKRKSVAIQIPVGKA--PVGETRVQFHSDQTRLLVVHETQL 541
+LVSSGAD+QLCVWS+D WEK+ S IQIP G + P+ TRVQFH DQ +LVVH +QL
Sbjct: 943 VLVSSGADSQLCVWSMDGWEKQASKQIQIPSGHSPNPLAHTRVQFHQDQIHVLVVHASQL 1002
Query: 542 AIYDASKMERVRQWLPQDTLSAPLSYAAYSCNSQLIYATFCDGNIGVFDADSLRLRCRIA 601
AIY+A K+E ++QW+P+++ S ++ A YSC+SQ IYA F DG++ + A +L+L+CRI
Sbjct: 1003 AIYEAPKLENMKQWIPKES-SGSVTDAVYSCDSQSIYAAFDDGSVSILTATTLQLKCRIG 1061
Query: 602 SSAYLSQAVLNGSQSVYPLVVAAHPQEPNQLSIGLTDGSVKVMEPTESEGKWGTTPPVDN 661
++YL N S VYP VAAHP EPNQ ++GLTDG V V+EP EGKWG + P +N
Sbjct: 1062 PNSYLPS---NPSSRVYPATVAAHPSEPNQFAVGLTDGGVHVIEPPGPEGKWGISAPPEN 1118
Query: 662 G 662
G
Sbjct: 1119 G 1119
>AT2G25420.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 17
plant structures; EXPRESSED DURING: 7 growth stages;
CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region
(InterPro:IPR017986), WD40/YVTN repeat-like
(InterPro:IPR015943), WD40 repeat (InterPro:IPR001680),
CTLH, C-terminal to LisH motif (InterPro:IPR006595),
LisH dimerisation motif (InterPro:IPR006594); BEST
Arabidopsis thaliana protein match is: protein binding
(TAIR:AT3G15880.2); Has 2557 Blast hits to 2036 proteins
in 230 species: Archae - 2; Bacteria - 361; Metazoa -
924; Fungi - 399; Plants - 275; Viruses - 0; Other
Eukaryotes - 596 (source: NCBI BLink). |
chr2:10817017-10820919 FORWARD
Length = 740
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 215/388 (55%), Gaps = 17/388 (4%)
Query: 283 PRAVDDVIDKTKPWQLA--EILDSGECRLVTLPDSRDTSSKVVRLLYTNSGVGILALGSN 340
P ++ KT P + EI D +C + LPD + K+ RL Y+ SG ILAL +
Sbjct: 352 PSSMKFFFKKTVPRKKKPNEIKDPSQCNALVLPDCF-SEEKIARLTYSPSGDYILALAED 410
Query: 341 GIQKLWKWTRNDQNPTGKATASAVPQHWQPNSGLLMANDVAGVNLEEAVPCIALSKNDSY 400
KLW W+ + QN K P+ QP SG M N++A +++++ C A+ SY
Sbjct: 411 ATHKLWTWS-SSQNEFCKENVYPKPRLHQPQSGKTMENEMA-TSVQKSTSCFAV--KGSY 466
Query: 401 VMSAAGGKVSLFNMMTFKVMTTFMSPPPASTFLAFHPQDNNIIAIGMEDSAIHIYNVRVD 460
+ S +GGK+++F++ F+ + +F SP P +T+ F P D ++A+G++D +I I+ +
Sbjct: 467 LFSTSGGKIAVFDLKNFEKVASFGSPTPMATYFIFIPGD--LLAVGLDDGSIFIHCLSSR 524
Query: 461 EVKSKLRGHQKRITGLAFSTNLNILVSSGADAQLCVWSIDTWEKRKSVAIQIPVGKAPVG 520
+VK KL GH ++IT LAFS N+LVSS +D +LC+WS +W K S
Sbjct: 525 KVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKLTSKNSTRKFCNRSNL 584
Query: 521 E-----TRVQFHSDQTRLLVVHETQLAIYDASKMERVRQWLPQDTLSAPLSYAAYSCNSQ 575
E T +QF Q LLVVH+ + +Y+ ++ QW+P D ++ A YS + +
Sbjct: 585 ESTSLVTHIQFDPYQIELLVVHDGWIGLYEVRTLDCRLQWIP-DASDPAITSATYSSDGE 643
Query: 576 LIYATFCDGNIGVFDADSLRLRCRIASSAYLSQAVLNGSQSVYPLVVAAHPQEPNQLSIG 635
+IY F G+I + D+ + C+I +++ + N S VYP VVAAHP PNQ+S G
Sbjct: 644 IIYVGFRCGSIKIVDSKTFMTLCQINLTSFTQLSTSNISLEVYPTVVAAHPSHPNQISAG 703
Query: 636 LTDGSVKVMEPTESEGKWGTTPPV-DNG 662
L++G V V++P S G WG P+ DNG
Sbjct: 704 LSNGKVIVLQPLWS-GGWGEAAPLEDNG 730
>AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide binding |
chr2:17304319-17306855 REVERSE
Length = 554
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 76/191 (39%), Gaps = 11/191 (5%)
Query: 21 CVVTCGDDKLIKVWDLGGRKLFNFEGHEAPVYSICPHHKESIQFIFATAIDGKIKAWLYD 80
C+ T D+ K+W G L FEGH + + H S +++ T+ D + W +
Sbjct: 312 CLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFH--PSGKYLGTTSYDKTWRLWDIN 369
Query: 81 NVGPRVDYDAPGRWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESEGAIKRHYVGFRKK 140
+ + R + + DG+ SCG DS W+ G + G K
Sbjct: 370 TGAELLLQEGHSRSVYGIAFQQDGALAASCGL----DSLARVWDLRTGRSILVFQGHIKP 425
Query: 141 STAGVVQFDTTQNHFLAAGEDSQIKFWDMDNTNVLTSTDADGGLPSLPRLRFN-KEGNLL 199
+ V F H + GED+Q + WD+ L A L S ++++ +EG L
Sbjct: 426 VFS--VNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVS--QVKYEPQEGYFL 481
Query: 200 AVTTADNGFKI 210
A + D I
Sbjct: 482 ATASYDMKVNI 492