Jatropha Genome Database

JcCA0020601.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020601.30 - phase: 0 /partial
         (149 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38670.1 | Symbols: PECT1 | PECT1 (PHOSPHORYLETHANOLAMINE CYT...   195   1e-50
AT2G32260.1 | Symbols: ATCCT1, CCT1 | cholinephosphate cytidylyl...    73   6e-14
AT4G15130.1 | Symbols: ATCCT2, CCT2 | catalytic/ choline-phospha...    71   2e-13

>AT2G38670.1 | Symbols: PECT1 | PECT1 (PHOSPHORYLETHANOLAMINE
           CYTIDYLYLTRANSFERASE 1); ethanolamine-phosphate
           cytidylyltransferase | chr2:16168979-16171680 FORWARD
          Length = 421

 Score =  195 bits (495), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 93/129 (72%), Positives = 109/129 (84%)

Query: 1   ILRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVS 60
           ILR AR+LGDFLLVGIH DQ VS  RG + PIM+LHERSLSVLACRYVDEVIIGAPWEVS
Sbjct: 273 ILRRARELGDFLLVGIHNDQTVSAKRGAHRPIMNLHERSLSVLACRYVDEVIIGAPWEVS 332

Query: 61  KDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVA 120
           +D ITTF+ISLVVHGT+AE +       +PY+VP SMGIFQ+L+SP +ITT+++ +RIVA
Sbjct: 333 RDTITTFDISLVVHGTVAESDDFRKEEDNPYSVPISMGIFQVLDSPLDITTSTIIRRIVA 392

Query: 121 NHEAYMKRN 129
           NHEAY KRN
Sbjct: 393 NHEAYQKRN 401



 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 9/122 (7%)

Query: 2   LRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSK 61
           LR AR LGD L+VG+ +D+ +  ++G   P+  LHER   V A ++VDEVI  AP+ +++
Sbjct: 74  LRQARALGDQLVVGVVSDEEIIANKGP--PVTPLHERMTMVKAVKWVDEVISDAPYAITE 131

Query: 62  D----MITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQR 117
           D    +   + I  ++HG   +   +L    D YA+ K  G ++ ++  + +++T +  R
Sbjct: 132 DFMKKLFDEYQIDYIIHG---DDPCVLPDGTDAYALAKKAGRYKQIKRTEGVSSTDIVGR 188

Query: 118 IV 119
           ++
Sbjct: 189 ML 190


>AT2G32260.1 | Symbols: ATCCT1, CCT1 | cholinephosphate
           cytidylyltransferase, putative / phosphorylcholine
           transferase, putative / CTP:phosphocholine
           cytidylyltransferase, putative | chr2:13697645-13700241
           FORWARD
          Length = 332

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 11  FLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNIS 70
           +LLVG   D+   +++G+   +M   ER  S+  C++VDEVI  APW V+++ +    I 
Sbjct: 66  YLLVGCCNDETTHKYKGRT--VMTAEERYESLRHCKWVDEVIPDAPWVVNQEFLDKHQID 123

Query: 71  LVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVANHEAYMKRN 129
            V H ++   +S  AG  D Y   K +G F+  +  + I+T+ +  RIV ++  Y+ RN
Sbjct: 124 YVAHDSLPYADSSGAG-KDVYEFVKKVGRFKETQRTEGISTSDIIMRIVKDYNQYVMRN 181


>AT4G15130.1 | Symbols: ATCCT2, CCT2 | catalytic/ choline-phosphate
           cytidylyltransferase/ nucleotidyltransferase |
           chr4:8637793-8639388 FORWARD
          Length = 304

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 11  FLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNIS 70
           +LLVG   D+I ++ +GK   +M   ER  S+  C++VDEVI  APW ++ + +    I 
Sbjct: 51  YLLVGCCNDEITNKFKGK--TVMTESERYESLRHCKWVDEVIPDAPWVLTTEFLDKHKID 108

Query: 71  LVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVANHEAYMKRN 129
            V H  +   ++  AG  D Y   KS+G F+  +  + I+T+ +  RIV ++  Y+ RN
Sbjct: 109 YVAHDALPYADTSGAG-NDVYEFVKSIGKFKETKRTEGISTSDIIMRIVKDYNQYVLRN 166