Jatropha Genome Database

JcCA0019191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0019191.10 + phase: 1 /partial
         (108 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47540.1 | Symbols:  | binding | chr5:19283265-19285328 REVERSE    162   3e-41
AT4G17270.1 | Symbols:  | Mo25 family protein | chr4:9676406-967...   155   5e-39
AT2G03410.1 | Symbols:  | Mo25 family protein | chr2:1033907-103...   145   6e-36
AT5G18940.2 | Symbols:  | Mo25 family protein | chr5:6325972-632...    84   1e-17
AT5G18940.1 | Symbols:  | Mo25 family protein | chr5:6325972-632...    80   2e-16

>AT5G47540.1 | Symbols:  | binding | chr5:19283265-19285328 REVERSE
          Length = 343

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 79/103 (76%), Positives = 95/103 (92%)

Query: 1   QLLGEILLDRSNTAVMVRYVSSKDNLRILMNLLRESSKNIQIDAFHVFKLFAANQNKPPE 60
           +LLG+ILLDRSN+AVM +YVSS+DNLRILMNLLRESSK+IQI+AFHVFKLFAANQNKP +
Sbjct: 236 KLLGDILLDRSNSAVMTKYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPAD 295

Query: 61  IVGILIANRSKLLRFLADFKMDREDEQFEEDKTLVIKEIASLK 103
           IV IL+ANRSKLLR LAD K D+EDE+FE DK+ V++EIA+L+
Sbjct: 296 IVNILVANRSKLLRLLADLKPDKEDERFEADKSQVLREIAALE 338


>AT4G17270.1 | Symbols:  | Mo25 family protein |
           chr4:9676406-9678568 FORWARD
          Length = 343

 Score =  155 bits (392), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 76/103 (73%), Positives = 90/103 (87%)

Query: 1   QLLGEILLDRSNTAVMVRYVSSKDNLRILMNLLRESSKNIQIDAFHVFKLFAANQNKPPE 60
           +LLG+ILLDRSN+AVM +YVSS DNLRILMNLLRESSK IQI+AFHVFKLF ANQNKP +
Sbjct: 236 KLLGDILLDRSNSAVMTKYVSSMDNLRILMNLLRESSKTIQIEAFHVFKLFVANQNKPSD 295

Query: 61  IVGILIANRSKLLRFLADFKMDREDEQFEEDKTLVIKEIASLK 103
           I  IL+ANR+KLLR LAD K D+EDE+F+ DK  V++EIA+LK
Sbjct: 296 IANILVANRNKLLRLLADIKPDKEDERFDADKAQVVREIANLK 338


>AT2G03410.1 | Symbols:  | Mo25 family protein |
           chr2:1033907-1034953 FORWARD
          Length = 348

 Score =  145 bits (366), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 67/102 (65%), Positives = 87/102 (85%)

Query: 1   QLLGEILLDRSNTAVMVRYVSSKDNLRILMNLLRESSKNIQIDAFHVFKLFAANQNKPPE 60
           +LLG++L+DRSN+ VMV+YVSS DNLRI+MNLLRE +KNIQ++AFH+FKLF AN+NKP +
Sbjct: 237 KLLGDVLMDRSNSGVMVKYVSSLDNLRIMMNLLREPTKNIQLEAFHIFKLFVANENKPED 296

Query: 61  IVGILIANRSKLLRFLADFKMDREDEQFEEDKTLVIKEIASL 102
           IV IL+ANR+K+LR  AD K ++ED  FE DK LV+ EIA+L
Sbjct: 297 IVAILVANRTKILRLFADLKPEKEDVGFETDKALVMNEIATL 338


>AT5G18940.2 | Symbols:  | Mo25 family protein |
           chr5:6325972-6328097 FORWARD
          Length = 343

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 58/88 (65%)

Query: 1   QLLGEILLDRSNTAVMVRYVSSKDNLRILMNLLRESSKNIQIDAFHVFKLFAANQNKPPE 60
           +LL + LL+  N+ +M +++     L+++M LL++SSKNIQI AFH+FK+F AN NKP E
Sbjct: 234 KLLSDFLLEPPNSHIMKKFILEVRYLKVIMTLLKDSSKNIQISAFHIFKIFVANPNKPQE 293

Query: 61  IVGILIANRSKLLRFLADFKMDREDEQF 88
           +  IL  N  KLL  L D     ED+QF
Sbjct: 294 VKIILARNHEKLLELLHDLSPGSEDDQF 321


>AT5G18940.1 | Symbols:  | Mo25 family protein |
           chr5:6325972-6328097 FORWARD
          Length = 345

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 1   QLLGEILLDRSNTAVMVRYVSSKDNLRILMNLLRESSKNIQIDAFHVFKLFAANQNKPPE 60
           +LL + LL+  N+ +M +++     L+++M LL++SSKNIQI AFH+FK+F AN NKP E
Sbjct: 234 KLLSDFLLEPPNSHIMKKFILEVRYLKVIMTLLKDSSKNIQISAFHIFKIFVANPNKPQE 293

Query: 61  IVGILIANRSKLLRFLADFKMDR--EDEQF 88
           +  IL  N  KLL  L D    +  ED+QF
Sbjct: 294 VKIILARNHEKLLELLHDLSPGKGSEDDQF 323