Jatropha Genome Database
- JcCA0018411.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0018411.10 - phase: 0 /partial
(302 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G17050.1 | Symbols: SPS2 | SPS2 (Solanesyl diphosphate syntha... 536 e-153
AT1G78510.1 | Symbols: SPS1 | SPS1 (solanesyl diphosphate syntha... 536 e-153
AT1G78510.2 | Symbols: SPS1 | SPS1 (solanesyl diphosphate syntha... 536 e-153
AT2G34630.1 | Symbols: GPPS, GPS1 | geranyl diphosphate synthase... 218 3e-57
AT2G34630.2 | Symbols: GPPS, GPS1 | geranyl diphosphate synthase... 217 6e-57
AT4G36810.1 | Symbols: GGPS1 | GGPS1 (GERANYLGERANYL PYROPHOSPHA... 135 3e-32
AT2G18620.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 127 6e-30
AT2G18640.1 | Symbols: GGPS4 | GGPS4 (GERANYLGERANYL PYROPHOSPHA... 127 1e-29
AT3G14510.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 125 4e-29
AT3G20160.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 122 3e-28
AT2G23800.1 | Symbols: GGPS2, GGPS5 | GGPS2 (GERANYLGERANYL PYRO... 114 8e-26
AT3G32040.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 113 1e-25
AT3G14550.1 | Symbols: GGPS3 | GGPS3 (GERANYLGERANYL PYROPHOSPHA... 111 5e-25
AT3G14530.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 111 5e-25
AT3G29430.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 110 1e-24
AT1G49530.1 | Symbols: GGPS6 | GGPS6 (geranylgeranyl pyrophospha... 97 1e-20
AT4G38460.1 | Symbols: GGR | GGR (geranylgeranyl reductase); far... 70 2e-12
>AT1G17050.1 | Symbols: SPS2 | SPS2 (Solanesyl diphosphate synthase
2); trans-octaprenyltranstransferase |
chr1:5829289-5831215 FORWARD
Length = 417
Score = 536 bits (1382), Expect = e-153, Method: Compositional matrix adjust.
Identities = 251/302 (83%), Positives = 288/302 (95%)
Query: 1 IVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIH 60
IVGAENPVL+SAAEQIF AGGKRMRP LVFLVSRATAE+AGLKELT +HRRL EIIEMIH
Sbjct: 116 IVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIH 175
Query: 61 TASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLANLESIEVIKLISQ 120
TASLIHDDVLDESDMRRG+ETVH+L+GTRVAVLAGDFMFAQ+SWYLANLE++EVIKLISQ
Sbjct: 176 TASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQ 235
Query: 121 VIKDFASGEIKQASSLFDCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMY 180
VIKDFASGEIKQASSLFDCDVKL++Y++KSYYKTASL+AASTKGAAIFS V+S ++EQMY
Sbjct: 236 VIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMY 295
Query: 181 EYGKNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLREIIESE 240
++GKNLGLSFQVVDD+LDFTQS EQLGKPA +DLAKGN+TAPVIFALE EP+LREIIESE
Sbjct: 296 QFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALENEPRLREIIESE 355
Query: 241 FCETGSLDKAVELVKHRGGIERAQELANEKAYLAIQSLNCLPRGAFRSALEEMVLYNLER 300
FCE GSL++A+E+V++RGGI++AQELA EKA LA+++LNCLPR FRSALE+MV++NLER
Sbjct: 356 FCEPGSLEEAIEIVRNRGGIKKAQELAKEKAELALKNLNCLPRSGFRSALEDMVMFNLER 415
Query: 301 ID 302
ID
Sbjct: 416 ID 417
>AT1G78510.1 | Symbols: SPS1 | SPS1 (solanesyl diphosphate synthase
1); trans-octaprenyltranstransferase |
chr1:29535410-29537163 REVERSE
Length = 406
Score = 536 bits (1381), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/302 (85%), Positives = 284/302 (94%)
Query: 1 IVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIH 60
IVGAENPVL+SAAEQIFGAGGKRMRP LVFLVS ATAE+AGLKELTT+HRRLAEIIEMIH
Sbjct: 105 IVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIH 164
Query: 61 TASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLANLESIEVIKLISQ 120
TASLIHDDVLDESDMRRGKETVH+L+GTRVAVLAGDFMFAQ+SWYLANLE++EVIKLISQ
Sbjct: 165 TASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQ 224
Query: 121 VIKDFASGEIKQASSLFDCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMY 180
VIKDFASGEIKQASSLFDCD KL+EYL+KS+YKTASL+AASTKGAAIFS V+ ++EQMY
Sbjct: 225 VIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMY 284
Query: 181 EYGKNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLREIIESE 240
E+GKNLGLSFQ+VDD+LDFTQS EQLGKPAGSDLAKGNLTAPVIFALE+EP+LREIIESE
Sbjct: 285 EFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALEREPRLREIIESE 344
Query: 241 FCETGSLDKAVELVKHRGGIERAQELANEKAYLAIQSLNCLPRGAFRSALEEMVLYNLER 300
FCE GSL++A+E V GGI+RAQELA EKA AI++L CLPR FRSALE+MVLYNLER
Sbjct: 345 FCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKNLQCLPRSGFRSALEDMVLYNLER 404
Query: 301 ID 302
ID
Sbjct: 405 ID 406
>AT1G78510.2 | Symbols: SPS1 | SPS1 (solanesyl diphosphate synthase
1); trans-octaprenyltranstransferase |
chr1:29535410-29537042 REVERSE
Length = 367
Score = 536 bits (1381), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/302 (85%), Positives = 284/302 (94%)
Query: 1 IVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIH 60
IVGAENPVL+SAAEQIFGAGGKRMRP LVFLVS ATAE+AGLKELTT+HRRLAEIIEMIH
Sbjct: 66 IVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIH 125
Query: 61 TASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLANLESIEVIKLISQ 120
TASLIHDDVLDESDMRRGKETVH+L+GTRVAVLAGDFMFAQ+SWYLANLE++EVIKLISQ
Sbjct: 126 TASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQ 185
Query: 121 VIKDFASGEIKQASSLFDCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMY 180
VIKDFASGEIKQASSLFDCD KL+EYL+KS+YKTASL+AASTKGAAIFS V+ ++EQMY
Sbjct: 186 VIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMY 245
Query: 181 EYGKNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLREIIESE 240
E+GKNLGLSFQ+VDD+LDFTQS EQLGKPAGSDLAKGNLTAPVIFALE+EP+LREIIESE
Sbjct: 246 EFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALEREPRLREIIESE 305
Query: 241 FCETGSLDKAVELVKHRGGIERAQELANEKAYLAIQSLNCLPRGAFRSALEEMVLYNLER 300
FCE GSL++A+E V GGI+RAQELA EKA AI++L CLPR FRSALE+MVLYNLER
Sbjct: 306 FCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKNLQCLPRSGFRSALEDMVLYNLER 365
Query: 301 ID 302
ID
Sbjct: 366 ID 367
>AT2G34630.1 | Symbols: GPPS, GPS1 | geranyl diphosphate synthase,
putative / GPPS, putative / dimethylallyltransferase,
putative / prenyl transferase, putative |
chr2:14579726-14581632 FORWARD
Length = 321
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 189/295 (64%), Gaps = 13/295 (4%)
Query: 1 IVGAENPVLMSAAEQIF--GAGGKRMRPALVFLVS-----RATAEIAG------LKELTT 47
+V AE P L SAAE F G GK+ R ++ L++ R + G EL
Sbjct: 1 MVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRV 60
Query: 48 KHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLA 107
+ R +AEI EMIH ASL+HDDVLD++D RRG +++ + G +++VLAGDF+ +++ LA
Sbjct: 61 RQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALA 120
Query: 108 NLESIEVIKLISQVIKDFASGEIKQASSLFDCDVKLEEYLIKSYYKTASLIAASTKGAAI 167
L++ EV+ L++ ++ +GE + +S + ++ Y+ K+YYKTASLI+ S K A+
Sbjct: 121 ALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAV 180
Query: 168 FSGVDSSISEQMYEYGKNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFAL 227
+G + ++ +EYG+NLGL+FQ++DD+LDFT ++ LGK + SD+ G +TAP++FA+
Sbjct: 181 LTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAM 240
Query: 228 EKEPKLREIIESEFCETGSLDKAVELVKHRGGIERAQELANEKAYLAIQSLNCLP 282
E+ P+LRE+++ + ++D A+E + GI+RA+ELA E A LA ++ LP
Sbjct: 241 EEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLP 295
>AT2G34630.2 | Symbols: GPPS, GPS1 | geranyl diphosphate synthase,
putative / GPPS, putative / dimethylallyltransferase,
putative / prenyl transferase, putative |
chr2:14578689-14581632 FORWARD
Length = 422
Score = 217 bits (553), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 189/295 (64%), Gaps = 13/295 (4%)
Query: 1 IVGAENPVLMSAAEQIF--GAGGKRMRPALVFLVS-----RATAEIAG------LKELTT 47
+V AE P L SAAE F G GK+ R ++ L++ R + G EL
Sbjct: 102 MVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRV 161
Query: 48 KHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLA 107
+ R +AEI EMIH ASL+HDDVLD++D RRG +++ + G +++VLAGDF+ +++ LA
Sbjct: 162 RQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALA 221
Query: 108 NLESIEVIKLISQVIKDFASGEIKQASSLFDCDVKLEEYLIKSYYKTASLIAASTKGAAI 167
L++ EV+ L++ ++ +GE + +S + ++ Y+ K+YYKTASLI+ S K A+
Sbjct: 222 ALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAV 281
Query: 168 FSGVDSSISEQMYEYGKNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFAL 227
+G + ++ +EYG+NLGL+FQ++DD+LDFT ++ LGK + SD+ G +TAP++FA+
Sbjct: 282 LTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAM 341
Query: 228 EKEPKLREIIESEFCETGSLDKAVELVKHRGGIERAQELANEKAYLAIQSLNCLP 282
E+ P+LRE+++ + ++D A+E + GI+RA+ELA E A LA ++ LP
Sbjct: 342 EEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLP 396
>AT4G36810.1 | Symbols: GGPS1 | GGPS1 (GERANYLGERANYL PYROPHOSPHATE
SYNTHASE 1); farnesyltranstransferase |
chr4:17343513-17344628 FORWARD
Length = 371
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 132/237 (55%), Gaps = 21/237 (8%)
Query: 19 AGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 76
AGGKR+RP L A E+ G +E T A +EMIHT SLIHDD+ +D D+R
Sbjct: 113 AGGKRVRPVLCI----AACELVGGEESTAMPAACA--VEMIHTMSLIHDDLPCMDNDDLR 166
Query: 77 RGKETVHQLYGTRVAVLAGDFMFAQSSWYLANLES------IEVIKLISQVIK-----DF 125
RGK T H+++G VAVLAGD + + + +LA+ S + V++ + ++ K
Sbjct: 167 RGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGL 226
Query: 126 ASGEIKQASS--LFDCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMYEYG 183
+G++ SS L DV LE +KTA+L+ AS AI G E++ ++
Sbjct: 227 VAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFA 286
Query: 184 KNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLREIIESE 240
+ +GL FQVVDD+LD T+S+++LGK AG DL LT P I LEK + E + E
Sbjct: 287 RCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNRE 343
>AT2G18620.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr2:8078317-8079360 FORWARD
Length = 347
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 124/223 (55%), Gaps = 18/223 (8%)
Query: 19 AGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 76
A GKR+RP L A E+ G +E A +EMIHT SLIHDD+ +D D+R
Sbjct: 92 ARGKRVRPVLCI----AACELVGGEESVALPAACA--VEMIHTMSLIHDDLPCMDNDDLR 145
Query: 77 RGKETVHQLYGTRVAVLAGDFMFAQSSWYLANLESI---EVIKLISQVIKDFAS-----G 128
RGK T H+++G VAVLAGD + + + +LA ++ V++ I ++ K S G
Sbjct: 146 RGKPTNHKVFGEDVAVLAGDALISFAFEHLATSTAVSPARVVRAIGELAKAIGSKGLVAG 205
Query: 129 EIKQASS--LFDCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMYEYGKNL 186
++ +S + DV LE +KTA L+ A+T AI G E++ + + +
Sbjct: 206 QVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCI 265
Query: 187 GLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEK 229
GL FQVVDD+LD T+S+E+LGK AG DL LT P + LEK
Sbjct: 266 GLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEK 308
>AT2G18640.1 | Symbols: GGPS4 | GGPS4 (GERANYLGERANYL PYROPHOSPHATE
SYNTHASE 4); farnesyltranstransferase |
chr2:8083754-8084872 REVERSE
Length = 372
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 130/229 (56%), Gaps = 19/229 (8%)
Query: 19 AGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 76
AGGKR+RP L A E+ G +E A +EMIHT SLI DD+ +D D+R
Sbjct: 118 AGGKRVRPILCL----AACELVGGEERLAIQAACA--VEMIHTMSLIKDDLPCMDNDDLR 171
Query: 77 RGKETVHQLYGTRVAVLAGDFMFAQSSWYL--ANLESIEVIKLISQVIKDFAS-----GE 129
RGK T H+++G VA+L+G + A + +L A++ S ++++ + ++ K + G+
Sbjct: 172 RGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRAVKELAKSIGTKGLVAGQ 231
Query: 130 IKQASS--LFDCDVKLEEYLIKSYYKTASLIAASTK-GAAIFSGVDSSISEQMYEYGKNL 186
K SS L DV LE+ +KT SL+ AS GA I G + I E++ + + +
Sbjct: 232 AKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEI-EKVRNFARCI 290
Query: 187 GLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLRE 235
GL FQVVDD+LD T+S+E+LGK AG D G LT P + +EK + E
Sbjct: 291 GLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVE 339
>AT3G14510.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr3:4867378-4868305 REVERSE
Length = 284
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 135/237 (56%), Gaps = 22/237 (9%)
Query: 19 AGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 76
AGGKR+RP L A E+ G E T A +EMIHT+SLIHDD+ +D +D+R
Sbjct: 27 AGGKRVRPLLCI----AVCELVGGDEATAMSAACA--VEMIHTSSLIHDDLPCMDNADLR 80
Query: 77 RGKETVHQLYGTRVAVLAG--------DFMFAQSSWYLANLESIEVIKLISQVI--KDFA 126
RGK T H+++G +AVLAG + M SS +A+ I + +++ I K
Sbjct: 81 RGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELARAIGTKGLV 140
Query: 127 SGEIKQASS--LFDCDVKLEEYLIKSYYKTASLI-AASTKGAAIFSGVDSSISEQMYEYG 183
+G++ SS L DV LE +KTA+L+ AA+ GA + G + I E++ +Y
Sbjct: 141 AGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEI-EKLRKYA 199
Query: 184 KNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLREIIESE 240
+ +GL FQVVDD+LD T+S E+LGK AG D+ G LT P + LE+ ++ E + E
Sbjct: 200 RCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLSRE 256
>AT3G20160.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr3:7038995-7040029 FORWARD
Length = 344
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 21/223 (9%)
Query: 21 GKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMRRG 78
GKR+RP L A E+ G +E T A IEM+H +SLI DD+ +D +RRG
Sbjct: 90 GKRVRPMLCL----AACELVGGQESTAMSAACA--IEMLHASSLILDDLPCMDNDSLRRG 143
Query: 79 KETVHQLYGTRVAVLAGDFMFA-----QSSWYLANLESIEVIKLISQVIKDFASGEIKQA 133
K T H ++G +A+LA + A +S A++ ++K + +++K Q
Sbjct: 144 KPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILKTVQEMVKAVEGLVAGQQ 203
Query: 134 SSL------FDCDVKLEEYLIKSYYKTASLI-AASTKGAAIFSGVDSSISEQMYEYGKNL 186
+ L FD D LE +KTA+L+ AA+ GA + G D I E++ Y + +
Sbjct: 204 ADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEI-ERLRSYARCI 262
Query: 187 GLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEK 229
GL FQVVDDVLD T+S+E+LGK AG DL G LT P + +EK
Sbjct: 263 GLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEK 305
>AT2G23800.1 | Symbols: GGPS2, GGPS5 | GGPS2 (GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 2); farnesyltranstransferase |
chr2:10131619-10132749 REVERSE
Length = 376
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 123/223 (55%), Gaps = 19/223 (8%)
Query: 19 AGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 76
A GKR+RP L A+ E+ G +E A +EMIHT SLI DD+ +D D+R
Sbjct: 122 AAGKRVRPILCL----ASCELVGGQENAAMPAACA--VEMIHTMSLIKDDLPCMDNDDLR 175
Query: 77 RGKETVHQLYGTRVAVLAGDFMFAQSSWYLANLE-----SIEVIKLISQVI--KDFASGE 129
RGK T H++YG VA+L+G + + + ++ E + ++ +++ I + +G+
Sbjct: 176 RGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWAVRELARSIGTRGLVAGQ 235
Query: 130 IKQASS--LFDCDVKLEEYLIKSYYKTASLI-AASTKGAAIFSGVDSSISEQMYEYGKNL 186
SS L +V LE +KTA L+ A+ GA I G D I E + ++ + +
Sbjct: 236 AMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEI-ESVRKFARCI 294
Query: 187 GLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEK 229
GL FQVVDD+LD T+S+E+LGK AG D G LT P + LEK
Sbjct: 295 GLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLIGLEK 337
>AT3G32040.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr3:13047822-13049009 REVERSE
Length = 360
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 131/239 (54%), Gaps = 20/239 (8%)
Query: 19 AGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 76
AGGKR+RP L A E+ G E T A +EMIHT+SLIHDD+ +D++D+R
Sbjct: 103 AGGKRVRPLLCI----AACELVGGDEATAMSAACA--VEMIHTSSLIHDDLPCMDDADLR 156
Query: 77 RGKETVHQLYGTRVAVLAG--------DFMFAQSSWYLANLESIEVIKLISQVI--KDFA 126
RGK T H+++G +AVLAG + M SS +A I + +++ I K
Sbjct: 157 RGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLVAPERMIRSVTELAKAIGTKGLV 216
Query: 127 SGEIKQASS--LFDCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMYEYGK 184
+G++ S L DV LE +KTA+L+ A+ AI G +++ +YG+
Sbjct: 217 AGQVSDLCSQGLNPYDVGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGR 276
Query: 185 NLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLREIIESEFCE 243
+GL FQVVDD++D T+S E+LGK AG D+ LT P + LE+ ++ E + E E
Sbjct: 277 CIGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTYPRLIGLERSREVAEKLRREAAE 335
>AT3G14550.1 | Symbols: GGPS3 | GGPS3 (GERANYLGERANYL PYROPHOSPHATE
SYNTHASE 3); farnesyltranstransferase |
chr3:4884754-4885945 REVERSE
Length = 360
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 128/236 (54%), Gaps = 20/236 (8%)
Query: 19 AGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 76
AGGKR+RP L A E+ G E T A +EMIHT+SLIHDD+ +D +D+R
Sbjct: 103 AGGKRVRPLLCI----AVCELVGGDEATAMSAACA--VEMIHTSSLIHDDLPCMDNADLR 156
Query: 77 RGKETVHQLYGTRVAVLAG--------DFMFAQSSWYLANLESIEVIKLISQVI--KDFA 126
RGK T H++YG +AVLAG + M SS +A I + +++ I
Sbjct: 157 RGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVSSGLVAPERMIRAVVELARAIGTTGLV 216
Query: 127 SGE-IKQASSLFDCD-VKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMYEYGK 184
+G+ I AS + D V LE +KTA+L+ A+ I G E++ +Y +
Sbjct: 217 AGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYAR 276
Query: 185 NLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLREIIESE 240
+GL FQVVDD+LD T+S E+LGK AG D+ G LT P + LE+ ++ E + E
Sbjct: 277 CIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRRE 332
>AT3G14530.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr3:4879293-4880448 REVERSE
Length = 360
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 128/236 (54%), Gaps = 20/236 (8%)
Query: 19 AGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 76
AGGKR+RP L A E+ G E T A +EMIHT+SLIHDD+ +D +D+R
Sbjct: 103 AGGKRVRPLLCI----AACELVGGDEATAMSAACA--VEMIHTSSLIHDDLPCMDNADLR 156
Query: 77 RGKETVHQLYGTRVAVLAG--------DFMFAQSSWYLANLESIEVIKLISQVI--KDFA 126
RGK T H++YG +AVLAG + M SS +A + I + +++ I
Sbjct: 157 RGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLV 216
Query: 127 SGE-IKQASSLFDCD-VKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMYEYGK 184
+G+ I AS + D V LE +KTA+L+ A+ I G E++ +Y +
Sbjct: 217 AGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYAR 276
Query: 185 NLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLREIIESE 240
+GL FQVVDD+LD T+S E+LGK AG D+ G LT P + LE ++ E + E
Sbjct: 277 CIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLEGSREVAEKLRRE 332
>AT3G29430.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr3:11311427-11312604 FORWARD
Length = 357
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 135/253 (53%), Gaps = 23/253 (9%)
Query: 19 AGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 76
AGGKR+RP L A E+ G E T A +EMIHT+SLIHDD+ +D++D+R
Sbjct: 100 AGGKRVRPLLCI----AACELVGGDEATAMSAACA--VEMIHTSSLIHDDLPCMDDADLR 153
Query: 77 RGKETVHQLYGTRVAVLAG--------DFMFAQSSWYLANLESIEVIKLISQVI--KDFA 126
RGK T H+ +G +AVLAG + M S+ +A I + +++ I K
Sbjct: 154 RGKPTNHKEFGEDMAVLAGDALLALAFEHMTFVSNGLVAPERMIRAVMELAKAIGTKGLV 213
Query: 127 SGEIKQASS--LFDCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMYEYGK 184
+G++ S L DV LE +KTA+L+ A+ AI G E++ +Y +
Sbjct: 214 AGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYAR 273
Query: 185 NLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLREIIESEFCET 244
+GL FQVVDD+LD T+S ++LGK AG D+ G LT P + LE+ ++ E + E E
Sbjct: 274 CIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQ 333
Query: 245 ---GSLDKAVELV 254
DKA LV
Sbjct: 334 LLGFDSDKAAPLV 346
>AT1G49530.1 | Symbols: GGPS6 | GGPS6 (geranylgeranyl pyrophosphate
synthase 6); farnesyltranstransferase |
chr1:18332529-18333539 FORWARD
Length = 336
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 120/225 (53%), Gaps = 22/225 (9%)
Query: 20 GGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMRR 77
GGKR+RP L + E+ G +E T A +EMIH ASLI DD+ +D+ +RR
Sbjct: 78 GGKRVRPMLCLV----ACELVGGQESTAMPAACA--VEMIHAASLILDDLPCMDDDSLRR 131
Query: 78 GKETVHQLYGTRVAVLAGDFM--------FAQSSWYLANLESIEVIKLISQVI--KDFAS 127
GK T H+++G + ++LA + + A +S + + + ++ +++ + + +
Sbjct: 132 GKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVA 191
Query: 128 GEIKQAS----SLFDCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMYEYG 183
G+ + S + D +L + +KTA L+ A+ AI G E++ Y
Sbjct: 192 GQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYA 251
Query: 184 KNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALE 228
+ +GL FQV+DDVLD T+S+E+LGK AG DL G LT P + ++
Sbjct: 252 RCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMGVD 296
>AT4G38460.1 | Symbols: GGR | GGR (geranylgeranyl reductase);
farnesyltranstransferase | chr4:17994849-17995974
FORWARD
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 23/193 (11%)
Query: 16 IFGAGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDES 73
+ G KR P + A E+ G L A +EM+H ASLIHDD+ +D+
Sbjct: 82 VLAQGAKRAPPVMCV----AACELFGGDRLAAFPTACA--LEMVHAASLIHDDLPCMDDD 135
Query: 74 DMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLAN------LESIEVIKLISQVIKDFAS 127
+RRGK + H +YG+ +A+LAGD +F + ++ + + +++LI+++ +
Sbjct: 136 PVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTV-- 193
Query: 128 GEIKQASSLFDCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISE----QMYEYG 183
G A+ + V LE + A + +A+ G+ +E + YG
Sbjct: 194 GSTGMAAGQY---VDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYG 250
Query: 184 KNLGLSFQVVDDV 196
+ +G+ +QVVDD+
Sbjct: 251 RAVGMLYQVVDDI 263