Jatropha Genome Database
- JcCA0015901.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0015901.10 + phase: 2 /partial
(586 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08800.2 | Symbols: | unknown protein | chr1:2813578-2817078... 209 3e-54
AT1G08800.1 | Symbols: | unknown protein | chr1:2813578-2817078... 209 3e-54
AT2G30690.1 | Symbols: | unknown protein | chr2:13076229-130785... 125 7e-29
AT1G18990.1 | Symbols: | unknown protein | chr1:6558778-6560432... 102 5e-22
AT5G16720.1 | Symbols: | unknown protein | chr5:5494309-5496562... 100 4e-21
AT1G70750.1 | Symbols: | unknown protein | chr1:26680728-266831... 93 5e-19
AT1G74830.1 | Symbols: | unknown protein | chr1:28113469-281151... 88 2e-17
AT5G06560.1 | Symbols: | unknown protein | chr5:2003678-2005543... 58 2e-08
AT4G13630.1 | Symbols: | unknown protein | chr4:7934093-7936029... 55 1e-07
AT1G04890.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 3e-07
AT3G54740.2 | Symbols: | unknown protein | chr3:20262949-202644... 51 2e-06
AT3G54740.1 | Symbols: | unknown protein | chr3:20263093-202644... 51 3e-06
>AT1G08800.2 | Symbols: | unknown protein | chr1:2813578-2817078
REVERSE
Length = 1113
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 201/360 (55%), Gaps = 59/360 (16%)
Query: 213 LLDLGEAYKLAVG------SRGRQLSGVLAEQWIGKDSSRVSDDLKLLFSQLSAAREQLT 266
LLDL +AY + VG S GRQ E W+ KD+SRVS+DLK L +Q+SA+R
Sbjct: 777 LLDLADAYNIVVGNEGHYDSNGRQQ----IENWMKKDTSRVSEDLKALLTQISASR---- 828
Query: 267 NDTSPRVTMSPRVSVSPKLSINSD--ELKNPDASSAIGMQILQKRISLERNESGLSLDGS 324
+SPR VSPK+S+NS E KN D MQ+L ++ LERNES LSL+G
Sbjct: 829 ----GIEFLSPR-DVSPKISVNSSDQETKNLDHD----MQLLLQKRMLERNESNLSLEGV 879
Query: 325 IVSEIEGETVVDRLNRQIEHDKKLLIALYKELEEERXXXXXXXXXXXXXXTRLQEEKATL 384
V+EIEGE+ DRL RQ+++D+KLL LYKELEEER TRLQEEKA+
Sbjct: 880 SVTEIEGESEGDRLKRQVDYDRKLLTGLYKELEEERSASAVATNQAMAMITRLQEEKASF 939
Query: 385 QMEALQCLRMMEEQAEYDMETLQKTNDLLAEREKEIQDLEADLEFYRNNYQSESLLQDTI 444
QMEALQ LRMMEEQAEYDME +Q+ NDLL EREK IQDLEA++E++R+
Sbjct: 940 QMEALQNLRMMEEQAEYDMEAIQRLNDLLVEREKLIQDLEAEIEYFRDQ----------- 988
Query: 445 EQNDIKEEHPEASSVKISTKTRKSVTEKQDISYNVEGINMSAGDKSRDTLKNSLLDFEDE 504
T +K+ K D++ V ++ S + + +++ L+ F++E
Sbjct: 989 ------------------TPQKKN---KLDVAEKVTEMD-SPSEGMSNKIQSCLVGFDEE 1026
Query: 505 SSDILHCLKKLEKRLCLFSNNQLDFANSEYSGNTEEKVNNFKGMNGKLEFQLNNGAEENE 564
I CL+K+E R+ +++ + E E+V KG LE +N+ NE
Sbjct: 1027 RLYITSCLEKIENRVNGKAHDD-NLPAQESVSELHERVERLKGDLYFLEQVMNSLGHGNE 1085
>AT1G08800.1 | Symbols: | unknown protein | chr1:2813578-2817078
REVERSE
Length = 1113
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 201/360 (55%), Gaps = 59/360 (16%)
Query: 213 LLDLGEAYKLAVG------SRGRQLSGVLAEQWIGKDSSRVSDDLKLLFSQLSAAREQLT 266
LLDL +AY + VG S GRQ E W+ KD+SRVS+DLK L +Q+SA+R
Sbjct: 777 LLDLADAYNIVVGNEGHYDSNGRQQ----IENWMKKDTSRVSEDLKALLTQISASR---- 828
Query: 267 NDTSPRVTMSPRVSVSPKLSINSD--ELKNPDASSAIGMQILQKRISLERNESGLSLDGS 324
+SPR VSPK+S+NS E KN D MQ+L ++ LERNES LSL+G
Sbjct: 829 ----GIEFLSPR-DVSPKISVNSSDQETKNLDHD----MQLLLQKRMLERNESNLSLEGV 879
Query: 325 IVSEIEGETVVDRLNRQIEHDKKLLIALYKELEEERXXXXXXXXXXXXXXTRLQEEKATL 384
V+EIEGE+ DRL RQ+++D+KLL LYKELEEER TRLQEEKA+
Sbjct: 880 SVTEIEGESEGDRLKRQVDYDRKLLTGLYKELEEERSASAVATNQAMAMITRLQEEKASF 939
Query: 385 QMEALQCLRMMEEQAEYDMETLQKTNDLLAEREKEIQDLEADLEFYRNNYQSESLLQDTI 444
QMEALQ LRMMEEQAEYDME +Q+ NDLL EREK IQDLEA++E++R+
Sbjct: 940 QMEALQNLRMMEEQAEYDMEAIQRLNDLLVEREKLIQDLEAEIEYFRDQ----------- 988
Query: 445 EQNDIKEEHPEASSVKISTKTRKSVTEKQDISYNVEGINMSAGDKSRDTLKNSLLDFEDE 504
T +K+ K D++ V ++ S + + +++ L+ F++E
Sbjct: 989 ------------------TPQKKN---KLDVAEKVTEMD-SPSEGMSNKIQSCLVGFDEE 1026
Query: 505 SSDILHCLKKLEKRLCLFSNNQLDFANSEYSGNTEEKVNNFKGMNGKLEFQLNNGAEENE 564
I CL+K+E R+ +++ + E E+V KG LE +N+ NE
Sbjct: 1027 RLYITSCLEKIENRVNGKAHDD-NLPAQESVSELHERVERLKGDLYFLEQVMNSLGHGNE 1085
>AT2G30690.1 | Symbols: | unknown protein | chr2:13076229-13078595
FORWARD
Length = 760
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 81/114 (71%)
Query: 324 SIVSEIEGETVVDRLNRQIEHDKKLLIALYKELEEERXXXXXXXXXXXXXXTRLQEEKAT 383
SI S+IEGE++V+ L +Q+EH +K L L KE EEER TRLQEEKA
Sbjct: 602 SISSDIEGESLVEVLKQQLEHGRKSLRDLNKEFEEERNASAIATNQAMAMITRLQEEKAA 661
Query: 384 LQMEALQCLRMMEEQAEYDMETLQKTNDLLAEREKEIQDLEADLEFYRNNYQSE 437
L MEALQ LRMM+EQAE+DM+ L++ ND+LA+REKEIQDLE +LE+YR Y E
Sbjct: 662 LHMEALQYLRMMDEQAEHDMDALERANDVLADREKEIQDLEMELEYYRVKYPDE 715
>AT1G18990.1 | Symbols: | unknown protein | chr1:6558778-6560432
REVERSE
Length = 524
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 71/106 (66%)
Query: 329 IEGETVVDRLNRQIEHDKKLLIALYKELEEERXXXXXXXXXXXXXXTRLQEEKATLQMEA 388
++G++++ LNRQ+ D+K L+ LY EL+EER TRLQ EKA +QMEA
Sbjct: 295 LDGDSILQHLNRQVRLDRKSLMDLYMELDEERSASAVAANNAMAMITRLQAEKAAVQMEA 354
Query: 389 LQCLRMMEEQAEYDMETLQKTNDLLAEREKEIQDLEADLEFYRNNY 434
LQ RMM+EQAEYD E LQ N LL +RE+E+++LEA +E YR Y
Sbjct: 355 LQYQRMMDEQAEYDQEALQSMNGLLVKREEEMKELEAGIEVYRLRY 400
>AT5G16720.1 | Symbols: | unknown protein | chr5:5494309-5496562
FORWARD
Length = 675
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 129/263 (49%), Gaps = 13/263 (4%)
Query: 294 NPDASSAIGMQILQKRISLERNESGLSLDGS----IVSEIEGE---TVVDRLNRQIEHDK 346
+P+ +++ +K L RNE + D +VSE++G ++RL + ++
Sbjct: 309 DPETPTSVSTLFNKKLHFLARNEYAAAEDAGDGNVLVSEMDGGDPLRTIERLRETVRAEQ 368
Query: 347 KLLIALYKELEEERXXXXXXXXXXXXXXTRLQEEKATLQMEALQCLRMMEEQAEYDMETL 406
+ L LY ELEEER TRLQEEKA +QMEALQ RMMEEQAEYD E L
Sbjct: 369 EALRDLYAELEEERSASAISANQTMAMITRLQEEKAKVQMEALQYQRMMEEQAEYDQEAL 428
Query: 407 QKTNDLLAEREKEIQDLEADLEFYRNN-YQSESLLQDTIEQNDIKEEHPEASSVKISTKT 465
Q N L+ +REKE + L+ +LE YR + ES ++ I I E+ + +
Sbjct: 429 QLLNHLMVKREKEKEQLQRELEVYRAKVLEYESKAKNKI----IVVENDCEADDDDKEEE 484
Query: 466 RKSVTEKQDISYNVEGINMSAGDKSRDTLKNSLLDFEDESSDILHCLKKLEKRLCLFSNN 525
+ ++ ++E I + + L SL +FE+E IL LK LE RL +
Sbjct: 485 NREEDNSSEMDVDLEKITLDCV-QHMSMLGESLSEFEEERLVILDQLKVLEDRLVTMQDK 543
Query: 526 QLDFANSEYSGNTEEKVNNFKGM 548
+ E+S + EE N G+
Sbjct: 544 ESAEDPGEFSNSYEEASNGHGGL 566
>AT1G70750.1 | Symbols: | unknown protein | chr1:26680728-26683147
REVERSE
Length = 749
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 316 ESGLSLDGSIVSEIEGETVVDRLNRQIEHDKKLLIALYKELEEERXXXXXXXXXXXXXXT 375
E +S+DG + EG VD+L +++ ++K L ALY+ELE ER
Sbjct: 396 EQRVSVDG--IECPEGVLTVDKLKFELQEERKALHALYEELEVERNASAVAASETMAMIN 453
Query: 376 RLQEEKATLQMEALQCLRMMEEQAEYDMETLQKTNDLLAEREKEIQDLEADLEFYR 431
RL EEKA +QMEALQ RMMEEQAE+D E LQ N+L+ REKE +LE +LE YR
Sbjct: 454 RLHEEKAAMQMEALQYQRMMEEQAEFDQEALQLLNELMVNREKENAELEKELEVYR 509
>AT1G74830.1 | Symbols: | unknown protein | chr1:28113469-28115193
REVERSE
Length = 542
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 70/104 (67%)
Query: 331 GETVVDRLNRQIEHDKKLLIALYKELEEERXXXXXXXXXXXXXXTRLQEEKATLQMEALQ 390
GE+++++L +++ DKK LI LY EL+EER TRLQ EKA +QMEALQ
Sbjct: 298 GESILNQLKKEVRLDKKSLIDLYMELDEERSASAVAANEAMAMITRLQAEKAAVQMEALQ 357
Query: 391 CLRMMEEQAEYDMETLQKTNDLLAEREKEIQDLEADLEFYRNNY 434
RMM+EQAEYD E LQ + LA+RE+E+++LEA+ E YR Y
Sbjct: 358 YQRMMDEQAEYDQEALQSMSSELAKREEEMKELEAEFEVYREKY 401
>AT5G06560.1 | Symbols: | unknown protein | chr5:2003678-2005543
REVERSE
Length = 518
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 319 LSLDGSIVSEIEGETVVDRLNRQIEHDKKLLIALYKELEEERXXXXXXXXXXXXXXTRLQ 378
L LD S ++++ E ++ L + ++ + LY+EL+EER RLQ
Sbjct: 55 LELDLSSNAKVQIENELELLRETVSSQQQSIQDLYEELDEERNAASTAASEAMSMILRLQ 114
Query: 379 EEKATLQMEALQCLRMMEEQAEYDMETLQKTNDLLAEREKEIQDLEADLEFYRNNYQSES 438
+KA LQME Q R EE+ E+D + L DL+ +RE+ IQ L + + Y++ S
Sbjct: 115 RDKAELQMELRQFKRFAEEKMEHDQQELLDLEDLIYKREQTIQALTFEAQAYKHRMMSFG 174
Query: 439 LLQDTIE 445
+ +E
Sbjct: 175 FTEAEVE 181
>AT4G13630.1 | Symbols: | unknown protein | chr4:7934093-7936029
REVERSE
Length = 569
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 14/138 (10%)
Query: 351 ALYKELEEERXXXXXXXXXXXXXXTRLQEEKATLQMEALQCLRMMEEQAEYDMETLQKTN 410
+L ELE+ER RLQEEKA+++MEA Q RM+EE++ +D E +
Sbjct: 238 SLALELEKERNAAASAADEALGMILRLQEEKASIEMEARQYQRMIEEKSAFDAEEMSILK 297
Query: 411 DLLAEREKEIQDLEADLEFYRNNYQSESLLQDTIEQNDIKEEHPEASSVKI-STKTRKSV 469
++L RE+E LE +++ YR + +T P++ +I +T + +
Sbjct: 298 EILLRREREKHFLEKEVDTYRQMFLETEQPHNT----------PDSKPAQIERLQTPQQI 347
Query: 470 TEKQDISYNVEGINMSAG 487
TE D ++E +N+S+G
Sbjct: 348 TEPWD---DMETVNVSSG 362
>AT1G04890.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Intermediate filament protein, conserved site
(InterPro:IPR018039), Protein of unknown function DUF593
(InterPro:IPR007656); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G13630.1); Has 6609
Blast hits to 4661 proteins in 382 species: Archae - 48;
Bacteria - 283; Metazoa - 4004; Fungi - 343; Plants -
346; Viruses - 6; Other Eukaryotes - 1579 (source: NCBI
BLink). | chr1:1381116-1382546 REVERSE
Length = 411
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 317 SGLSLDGSIVSEIEGETVVDRLNRQIEHDKKLLIALYKELEEERXXXXXXXXXXXXXXTR 376
S S + S V +E +V D L ++ ++ + EL++ER R
Sbjct: 94 SNSSAEQSFVRNVEKRSVRD-LEELLKEERAARATVCVELDKERSAAASAADEAMAMIHR 152
Query: 377 LQEEKATLQMEALQCLRMMEEQAEYDMETLQKTNDLLAEREKEIQDLEADLEFYR 431
LQ+EKA ++MEA Q R++EE++ +D E + D+L RE+E LE ++E YR
Sbjct: 153 LQDEKAAIEMEARQFQRLVEERSTFDAEEMVILKDILIRREREKHFLEKEVEAYR 207
>AT3G54740.2 | Symbols: | unknown protein | chr3:20262949-20264466
FORWARD
Length = 438
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 322 DGSIVSEIEGETVVDRLNRQIEHDKKLLIALYKELEEERXXXXXXXXXXXXXXTRLQEEK 381
+ I+ E E +++ L+ Q E K L + ELEEER RLQ EK
Sbjct: 62 NAKILVENECAALLEALSSQRETVKDLHL----ELEEERNAAASAANETMSMILRLQREK 117
Query: 382 ATLQMEALQCLRMMEEQAEYDMETLQKTNDLLAEREKEIQDLEADLEFYRN 432
A +QMEA Q +E+ +D E L +LL E+E+ I+ L ++E Y++
Sbjct: 118 AEIQMEARQFKMFAQEKMTHDQEKLSVLENLLYEKEQAIEALTYEVEAYKH 168
>AT3G54740.1 | Symbols: | unknown protein | chr3:20263093-20264466
FORWARD
Length = 390
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 322 DGSIVSEIEGETVVDRLNRQIEHDKKLLIALYKELEEERXXXXXXXXXXXXXXTRLQEEK 381
+ I+ E E +++ L+ Q E K L + ELEEER RLQ EK
Sbjct: 14 NAKILVENECAALLEALSSQRETVKDLHL----ELEEERNAAASAANETMSMILRLQREK 69
Query: 382 ATLQMEALQCLRMMEEQAEYDMETLQKTNDLLAEREKEIQDLEADLEFYRN 432
A +QMEA Q +E+ +D E L +LL E+E+ I+ L ++E Y++
Sbjct: 70 AEIQMEARQFKMFAQEKMTHDQEKLSVLENLLYEKEQAIEALTYEVEAYKH 120