Jatropha Genome Database

JcCA0015401.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0015401.20 - phase: 0 /partial
         (258 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17720.2 | Symbols: ATB BETA | ATB BETA; nucleotide binding /...   245   2e-65
AT1G17720.1 | Symbols: ATB BETA | ATB BETA; nucleotide binding /...   244   3e-65
AT1G51690.1 | Symbols: ATB ALPHA | ATB ALPHA; nucleotide binding...   241   3e-64
AT1G51690.2 | Symbols: ATB ALPHA | ATB ALPHA; nucleotide binding...   241   3e-64

>AT1G17720.2 | Symbols: ATB BETA | ATB BETA; nucleotide binding /
           protein phosphatase type 2A regulator |
           chr1:6093949-6098065 REVERSE
          Length = 500

 Score =  245 bits (625), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 161/253 (63%), Gaps = 25/253 (9%)

Query: 12  VKEHKCKKVKETDADSVVYSESALLAEKSFSSELQKPSTVNGRHLEWTGDIVKNISPFQE 71
           V+E K KK+ E + D             S SS +      NG   +   D +     F  
Sbjct: 143 VQEKKIKKISEMNID------------PSESSNIPPQLVTNGLPADKGHDYLSKDFSFPP 190

Query: 72  GHTK------IAHAEDTTRASCRKVYAHAHDFXXXXXXXXXDGETFISADDLRINLWNLE 125
           G         +   E    A CR+VYAHAHD+         DGETFISADDLR+NLWNLE
Sbjct: 191 GGIPSLRLPVVTSQETNLVARCRRVYAHAHDYHINSISNSSDGETFISADDLRVNLWNLE 250

Query: 126 ISNQCFNIIDMKPANMEDLTEVITSAEFHPIYCNMLAYSSSRGFIRLVDMRQSALCDQSA 185
           ISNQ FNI+D+KP NMEDLTEVITSAEFHPI+CNMLAYSSS+G IRL+DMRQSALCD   
Sbjct: 251 ISNQSFNIVDVKPTNMEDLTEVITSAEFHPIHCNMLAYSSSKGSIRLIDMRQSALCDSHT 310

Query: 186 MILQDADCHEPKSFFTEIIASISDMKFTNDGQHILSRDYLNLKVFDLNYTLWDMRKNALP 245
            + ++ +    +SFFTEIIASISD+KF+ DG++ILSRDY+ LK       LWD+  ++ P
Sbjct: 311 KLFEEPEAPGSRSFFTEIIASISDIKFSKDGRYILSRDYMTLK-------LWDINMDSGP 363

Query: 246 VAIFKIHEHLQPK 258
           VA +++HEHL+P+
Sbjct: 364 VASYQVHEHLRPR 376


>AT1G17720.1 | Symbols: ATB BETA | ATB BETA; nucleotide binding /
           protein phosphatase type 2A regulator |
           chr1:6093949-6098065 REVERSE
          Length = 501

 Score =  244 bits (624), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/247 (51%), Positives = 164/247 (66%), Gaps = 12/247 (4%)

Query: 12  VKEHKCKKVKETDADSVVYSESALLAEKSFSSELQKPSTVNGRHLEWTGDIVKNISPFQE 71
           V+E K KK+ E + D    SES+ +  +  ++ L  P+     +L           P   
Sbjct: 143 VQEKKIKKISEMNIDP---SESSNIPPQLVTNGL--PADKGHDYLSKDFSFPPGGIPSLR 197

Query: 72  GHTKIAHAEDTTRASCRKVYAHAHDFXXXXXXXXXDGETFISADDLRINLWNLEISNQCF 131
               +   E    A CR+VYAHAHD+         DGETFISADDLR+NLWNLEISNQ F
Sbjct: 198 LPVVVTSQETNLVARCRRVYAHAHDYHINSISNSSDGETFISADDLRVNLWNLEISNQSF 257

Query: 132 NIIDMKPANMEDLTEVITSAEFHPIYCNMLAYSSSRGFIRLVDMRQSALCDQSAMILQDA 191
           NI+D+KP NMEDLTEVITSAEFHPI+CNMLAYSSS+G IRL+DMRQSALCD    + ++ 
Sbjct: 258 NIVDVKPTNMEDLTEVITSAEFHPIHCNMLAYSSSKGSIRLIDMRQSALCDSHTKLFEEP 317

Query: 192 DCHEPKSFFTEIIASISDMKFTNDGQHILSRDYLNLKVFDLNYTLWDMRKNALPVAIFKI 251
           +    +SFFTEIIASISD+KF+ DG++ILSRDY+ LK       LWD+  ++ PVA +++
Sbjct: 318 EAPGSRSFFTEIIASISDIKFSKDGRYILSRDYMTLK-------LWDINMDSGPVASYQV 370

Query: 252 HEHLQPK 258
           HEHL+P+
Sbjct: 371 HEHLRPR 377


>AT1G51690.1 | Symbols: ATB ALPHA | ATB ALPHA; nucleotide binding /
           protein phosphatase type 2A regulator |
           chr1:19166218-19169974 FORWARD
          Length = 513

 Score =  241 bits (615), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 112/179 (62%), Positives = 140/179 (78%), Gaps = 7/179 (3%)

Query: 80  EDTTRASCRKVYAHAHDFXXXXXXXXXDGETFISADDLRINLWNLEISNQCFNIIDMKPA 139
           E +  A CR+VYAHAHD+         DGETFISADDLRINLWNLEISNQ FNI+D+KPA
Sbjct: 218 ESSPVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPA 277

Query: 140 NMEDLTEVITSAEFHPIYCNMLAYSSSRGFIRLVDMRQSALCDQSAMILQDADCHEPKSF 199
            MEDL+EVITSAEFHP +CNMLAYSSS+G IRL+D+RQSALCD  + + ++ +   PKSF
Sbjct: 278 KMEDLSEVITSAEFHPTHCNMLAYSSSKGSIRLIDLRQSALCDSHSKLFEEPEQAGPKSF 337

Query: 200 FTEIIASISDMKFTNDGQHILSRDYLNLKVFDLNYTLWDMRKNALPVAIFKIHEHLQPK 258
           FTEIIAS+SD+KF  +G+++LSRDY+ LK       LWD+  +A PVA F++HE+L+PK
Sbjct: 338 FTEIIASVSDIKFAKEGRYLLSRDYMTLK-------LWDINMDAGPVATFQVHEYLKPK 389


>AT1G51690.2 | Symbols: ATB ALPHA | ATB ALPHA; nucleotide binding /
           protein phosphatase type 2A regulator |
           chr1:19166218-19169974 FORWARD
          Length = 512

 Score =  241 bits (615), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 112/179 (62%), Positives = 140/179 (78%), Gaps = 7/179 (3%)

Query: 80  EDTTRASCRKVYAHAHDFXXXXXXXXXDGETFISADDLRINLWNLEISNQCFNIIDMKPA 139
           E +  A CR+VYAHAHD+         DGETFISADDLRINLWNLEISNQ FNI+D+KPA
Sbjct: 217 ESSPVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPA 276

Query: 140 NMEDLTEVITSAEFHPIYCNMLAYSSSRGFIRLVDMRQSALCDQSAMILQDADCHEPKSF 199
            MEDL+EVITSAEFHP +CNMLAYSSS+G IRL+D+RQSALCD  + + ++ +   PKSF
Sbjct: 277 KMEDLSEVITSAEFHPTHCNMLAYSSSKGSIRLIDLRQSALCDSHSKLFEEPEQAGPKSF 336

Query: 200 FTEIIASISDMKFTNDGQHILSRDYLNLKVFDLNYTLWDMRKNALPVAIFKIHEHLQPK 258
           FTEIIAS+SD+KF  +G+++LSRDY+ LK       LWD+  +A PVA F++HE+L+PK
Sbjct: 337 FTEIIASVSDIKFAKEGRYLLSRDYMTLK-------LWDINMDAGPVATFQVHEYLKPK 388