Jatropha Genome Database

JcCA0011592.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0011592.10 - phase: 0 
         (234 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G71990.1 | Symbols: FUT13, ATFUT13, FUCTC, FT4-M | FUT13 (FUC...   403   e-113
AT3G19280.1 | Symbols: FUT11, ATFUT11, FUCT1, FUCTA | FUT11 (FUC...    79   2e-15
AT1G49710.1 | Symbols: FUT12, ATFUT12, FUCTB, FUCT2 | FUT12 (FUC...    72   3e-13

>AT1G71990.1 | Symbols: FUT13, ATFUT13, FUCTC, FT4-M | FUT13
           (FUCOSYLTRANSFERASE 13); fucosyltransferase/
           transferase, transferring glycosyl groups |
           chr1:27100345-27102097 FORWARD
          Length = 401

 Score =  403 bits (1036), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 183/234 (78%), Positives = 210/234 (89%)

Query: 1   MDLEAGRKRSGLEDIFISYHAEDDVQSTYAGALFHNGRNYHVSPSKKNDTLVYWSSSRCL 60
           M+LEAGRKRSG EDIFISYHA+DDVQ+TYAG+LFHN RNYH+SP K ND LVYWSSSRCL
Sbjct: 166 MELEAGRKRSGREDIFISYHAKDDVQTTYAGSLFHNNRNYHISPHKNNDVLVYWSSSRCL 225

Query: 61  AQRNQLAKSLLRLLPHHSFGKCLNNVGGLDMALNFYPECANDASVKPKWWDHLHCAMSHY 120
             R++LAKSLL L+PHHSFGKCLNNVGGLD AL+ YPEC  + + + KW+DHLHCAMSHY
Sbjct: 226 PHRDRLAKSLLDLIPHHSFGKCLNNVGGLDSALSMYPECVAEHNAEAKWYDHLHCAMSHY 285

Query: 121 KFVLAIENTVTESYVTEKLFYALDSGAVPIYFGAPNVDDFVPPHSIIDGTKFISMEELAS 180
           KFVLAIENT  ESYVTEKLFYALDSG+VPIYFGA NV DFVPPHS+IDG+KF SM+ELA+
Sbjct: 286 KFVLAIENTAVESYVTEKLFYALDSGSVPIYFGASNVQDFVPPHSVIDGSKFGSMQELAA 345

Query: 181 YIKKLANDPVAYAEYHAWRRCGVLGNYGKTRLASLDTLPCRLCEAVSRKGGRNA 234
           Y+K+L +DPVAY+EYHAWRRCG++GNYGKTR  SLDTLPCRLCE +SR+GG+NA
Sbjct: 346 YVKRLGDDPVAYSEYHAWRRCGLMGNYGKTRAVSLDTLPCRLCEEISRRGGKNA 399


>AT3G19280.1 | Symbols: FUT11, ATFUT11, FUCT1, FUCTA | FUT11
           (FUCOSYLTRANSFERASE 11);
           4-galactosyl-N-acetylglucosaminide
           3-alpha-L-fucosyltransferase/ fucosyltransferase/
           transferase, transferring glycosyl groups |
           chr3:6681409-6683801 REVERSE
          Length = 501

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 116 AMSHYKFVLAIENTVTESYVTEKLFYALDSGAVPIYFGAPNVDDFVP-PHSIIDGTKFIS 174
           A+ HYKF LA ENT  E YVTEK F +L +G+VP+  GAPN+++F P P S +   +   
Sbjct: 259 ALKHYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGAPNIEEFAPSPDSFLHIKQMDD 318

Query: 175 MEELASYIKKLANDPVAYAEYHAWRRCGVLGNYGKTRLASLDTLPCRLCEAVSRK 229
           ++ +A  +K LA++P AY +   W+  G   ++      +     CRLC  V+ +
Sbjct: 319 VKAVAKKMKYLADNPDAYNQTLRWKHEGPSDSFKALIDMAAVHSSCRLCIFVATR 373


>AT1G49710.1 | Symbols: FUT12, ATFUT12, FUCTB, FUCT2 | FUT12
           (FUCOSYLTRANSFERASE 12); fucosyltransferase/
           transferase, transferring glycosyl groups |
           chr1:18391622-18393769 REVERSE
          Length = 513

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 116 AMSHYKFVLAIENTVTESYVTEKLFYALDSGAVPIYFGAPNVDDFVPPH-SIIDGTKFIS 174
           A+  YKF LA ENT  E YVTEK F +L +G+VP+  G PN+++F P   S +       
Sbjct: 270 ALKRYKFSLAFENTNEEDYVTEKFFQSLVAGSVPVVVGPPNIEEFAPASDSFLHIKTMED 329

Query: 175 MEELASYIKKLANDPVAYAEYHAWRRCGVLGNYGKTRLASLDTLPCRLC 223
           +E +A  +K LA +P AY +   W+  G   ++      +     CRLC
Sbjct: 330 VEPVAKRMKYLAANPAAYNQTLRWKYEGPSDSFKALVDMAAVHSSCRLC 378