Jatropha Genome Database

JcCA0008021.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0008021.20 + phase: 0 
         (323 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G22890.4 | Symbols: PGR5-LIKE A | PGR5-LIKE A | chr4:12007157...   416   e-116
AT4G22890.5 | Symbols: PGR5-LIKE A | PGR5-LIKE A | chr4:12007157...   416   e-116
AT4G22890.2 | Symbols: PGR5-LIKE A | PGR5-LIKE A | chr4:12007157...   415   e-116
AT4G22890.3 | Symbols: PGR5-LIKE A | PGR5-LIKE A | chr4:12007157...   415   e-116
AT4G22890.1 | Symbols: PGR5-LIKE A | PGR5-LIKE A | chr4:12007157...   415   e-116
AT4G11960.1 | Symbols: PGRL1B | PGRL1B (PGR5-Like B) | chr4:7175...   399   e-112
AT5G59400.1 | Symbols:  | unknown protein | chr5:23957756-239595...    61   1e-09
AT5G59400.2 | Symbols:  | unknown protein | chr5:23957756-239595...    61   1e-09

>AT4G22890.4 | Symbols: PGR5-LIKE A | PGR5-LIKE A |
           chr4:12007157-12009175 FORWARD
          Length = 321

 Score =  416 bits (1068), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/325 (65%), Positives = 246/325 (75%), Gaps = 6/325 (1%)

Query: 1   MASKLAISLTSSGLSSAPIRKPVIXXXXXXXXXXXXXX-IQFN-GRHFCVRRRIFMLPIK 58
           M SK+  SLTS  L SA  RKP                  Q + G+   +RRR+F+LP K
Sbjct: 1   MGSKMLFSLTSPRLFSAVSRKPSSSFSPSPPSPSSRTQWTQLSPGKSISLRRRVFLLPAK 60

Query: 59  ATAXXXXXXXXXXXXXSKILQYCSIDRKEKRSIGEMEQEFLQALQSFYYEGKAIMSNEEF 118
           AT              S +L YCSI++ EK++IGEMEQEFLQALQSFYY+GKAIMSNEEF
Sbjct: 61  ATTEQSGGDNVD----SNVLPYCSINKAEKKTIGEMEQEFLQALQSFYYDGKAIMSNEEF 116

Query: 119 DNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGKPILSDQEFDELKMRLKQEGSEIVVE 178
           DNLKEELMWEGSSVVMLSSDEQ+FLEASMAYVSG PIL+D+E+D+LK++LK +GS+IV E
Sbjct: 117 DNLKEELMWEGSSVVMLSSDEQRFLEASMAYVSGNPILNDEEYDKLKLKLKIDGSDIVSE 176

Query: 179 GPRCSLRSRKVYSDLSVDYLKMFLLYVPATVVAXXXXXXXXXXXXXEITYLLELPEPFSF 238
           GPRCSLRS+KVYSDL+VDY KM LL VPATVVA             EITY++ELPEP+SF
Sbjct: 177 GPRCSLRSKKVYSDLAVDYFKMLLLNVPATVVALGLFFFLDDITGFEITYIMELPEPYSF 236

Query: 239 IFTWFAAVPLIVWLAQSFTNAIVKDFLILKGPCPNCGTENLSFFGTILSVSSGGVTNMVK 298
           IFTWFAAVP+IV+LA S T  I+KDFLILKGPCPNCGTEN SFFGTILS+SSGG TN VK
Sbjct: 237 IFTWFAAVPVIVYLALSITKLIIKDFLILKGPCPNCGTENTSFFGTILSISSGGKTNTVK 296

Query: 299 CSNCGTDMEYDSKTRLITLPEGSNA 323
           C+NCGT M YDS +RLITLPEGS A
Sbjct: 297 CTNCGTAMVYDSGSRLITLPEGSQA 321


>AT4G22890.5 | Symbols: PGR5-LIKE A | PGR5-LIKE A |
           chr4:12007157-12009175 FORWARD
          Length = 322

 Score =  416 bits (1068), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/325 (65%), Positives = 246/325 (75%), Gaps = 5/325 (1%)

Query: 1   MASKLAISLTSSGLSSAPIRKPVIXXXXXXXXXXXXXX-IQFN-GRHFCVRRRIFMLPIK 58
           M SK+  SLTS  L SA  RKP                  Q + G+   +RRR+F+LP K
Sbjct: 1   MGSKMLFSLTSPRLFSAVSRKPSSSFSPSPPSPSSRTQWTQLSPGKSISLRRRVFLLPAK 60

Query: 59  ATAXXXXXXXXXXXXXSKILQYCSIDRKEKRSIGEMEQEFLQALQSFYYEGKAIMSNEEF 118
           AT              S +L YCSI++ EK++IGEMEQEFLQALQSFYY+GKAIMSNEEF
Sbjct: 61  ATTEQSVGGDNVD---SNVLPYCSINKAEKKTIGEMEQEFLQALQSFYYDGKAIMSNEEF 117

Query: 119 DNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGKPILSDQEFDELKMRLKQEGSEIVVE 178
           DNLKEELMWEGSSVVMLSSDEQ+FLEASMAYVSG PIL+D+E+D+LK++LK +GS+IV E
Sbjct: 118 DNLKEELMWEGSSVVMLSSDEQRFLEASMAYVSGNPILNDEEYDKLKLKLKIDGSDIVSE 177

Query: 179 GPRCSLRSRKVYSDLSVDYLKMFLLYVPATVVAXXXXXXXXXXXXXEITYLLELPEPFSF 238
           GPRCSLRS+KVYSDL+VDY KM LL VPATVVA             EITY++ELPEP+SF
Sbjct: 178 GPRCSLRSKKVYSDLAVDYFKMLLLNVPATVVALGLFFFLDDITGFEITYIMELPEPYSF 237

Query: 239 IFTWFAAVPLIVWLAQSFTNAIVKDFLILKGPCPNCGTENLSFFGTILSVSSGGVTNMVK 298
           IFTWFAAVP+IV+LA S T  I+KDFLILKGPCPNCGTEN SFFGTILS+SSGG TN VK
Sbjct: 238 IFTWFAAVPVIVYLALSITKLIIKDFLILKGPCPNCGTENTSFFGTILSISSGGKTNTVK 297

Query: 299 CSNCGTDMEYDSKTRLITLPEGSNA 323
           C+NCGT M YDS +RLITLPEGS A
Sbjct: 298 CTNCGTAMVYDSGSRLITLPEGSQA 322


>AT4G22890.2 | Symbols: PGR5-LIKE A | PGR5-LIKE A |
           chr4:12007157-12009175 FORWARD
          Length = 324

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/325 (65%), Positives = 246/325 (75%), Gaps = 3/325 (0%)

Query: 1   MASKLAISLTSSGLSSAPIRKPVIXXXXXXXXXXXXXX-IQFN-GRHFCVRRRIFMLPIK 58
           M SK+  SLTS  L SA  RKP                  Q + G+   +RRR+F+LP K
Sbjct: 1   MGSKMLFSLTSPRLFSAVSRKPSSSFSPSPPSPSSRTQWTQLSPGKSISLRRRVFLLPAK 60

Query: 59  ATAXXXXXXXXXXXXXSKILQYCSIDRKEKRSIGEMEQEFLQALQSFYYEGKAIMSNEEF 118
           AT              S +L YCSI++ EK++IGEMEQEFLQALQSFYY+GKAIMSNEEF
Sbjct: 61  ATTEQSGPVGGDNVD-SNVLPYCSINKAEKKTIGEMEQEFLQALQSFYYDGKAIMSNEEF 119

Query: 119 DNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGKPILSDQEFDELKMRLKQEGSEIVVE 178
           DNLKEELMWEGSSVVMLSSDEQ+FLEASMAYVSG PIL+D+E+D+LK++LK +GS+IV E
Sbjct: 120 DNLKEELMWEGSSVVMLSSDEQRFLEASMAYVSGNPILNDEEYDKLKLKLKIDGSDIVSE 179

Query: 179 GPRCSLRSRKVYSDLSVDYLKMFLLYVPATVVAXXXXXXXXXXXXXEITYLLELPEPFSF 238
           GPRCSLRS+KVYSDL+VDY KM LL VPATVVA             EITY++ELPEP+SF
Sbjct: 180 GPRCSLRSKKVYSDLAVDYFKMLLLNVPATVVALGLFFFLDDITGFEITYIMELPEPYSF 239

Query: 239 IFTWFAAVPLIVWLAQSFTNAIVKDFLILKGPCPNCGTENLSFFGTILSVSSGGVTNMVK 298
           IFTWFAAVP+IV+LA S T  I+KDFLILKGPCPNCGTEN SFFGTILS+SSGG TN VK
Sbjct: 240 IFTWFAAVPVIVYLALSITKLIIKDFLILKGPCPNCGTENTSFFGTILSISSGGKTNTVK 299

Query: 299 CSNCGTDMEYDSKTRLITLPEGSNA 323
           C+NCGT M YDS +RLITLPEGS A
Sbjct: 300 CTNCGTAMVYDSGSRLITLPEGSQA 324


>AT4G22890.3 | Symbols: PGR5-LIKE A | PGR5-LIKE A |
           chr4:12007157-12009175 FORWARD
          Length = 324

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/325 (65%), Positives = 246/325 (75%), Gaps = 3/325 (0%)

Query: 1   MASKLAISLTSSGLSSAPIRKPVIXXXXXXXXXXXXXX-IQFN-GRHFCVRRRIFMLPIK 58
           M SK+  SLTS  L SA  RKP                  Q + G+   +RRR+F+LP K
Sbjct: 1   MGSKMLFSLTSPRLFSAVSRKPSSSFSPSPPSPSSRTQWTQLSPGKSISLRRRVFLLPAK 60

Query: 59  ATAXXXXXXXXXXXXXSKILQYCSIDRKEKRSIGEMEQEFLQALQSFYYEGKAIMSNEEF 118
           AT              S +L YCSI++ EK++IGEMEQEFLQALQSFYY+GKAIMSNEEF
Sbjct: 61  ATTEQSGPVGGDNVD-SNVLPYCSINKAEKKTIGEMEQEFLQALQSFYYDGKAIMSNEEF 119

Query: 119 DNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGKPILSDQEFDELKMRLKQEGSEIVVE 178
           DNLKEELMWEGSSVVMLSSDEQ+FLEASMAYVSG PIL+D+E+D+LK++LK +GS+IV E
Sbjct: 120 DNLKEELMWEGSSVVMLSSDEQRFLEASMAYVSGNPILNDEEYDKLKLKLKIDGSDIVSE 179

Query: 179 GPRCSLRSRKVYSDLSVDYLKMFLLYVPATVVAXXXXXXXXXXXXXEITYLLELPEPFSF 238
           GPRCSLRS+KVYSDL+VDY KM LL VPATVVA             EITY++ELPEP+SF
Sbjct: 180 GPRCSLRSKKVYSDLAVDYFKMLLLNVPATVVALGLFFFLDDITGFEITYIMELPEPYSF 239

Query: 239 IFTWFAAVPLIVWLAQSFTNAIVKDFLILKGPCPNCGTENLSFFGTILSVSSGGVTNMVK 298
           IFTWFAAVP+IV+LA S T  I+KDFLILKGPCPNCGTEN SFFGTILS+SSGG TN VK
Sbjct: 240 IFTWFAAVPVIVYLALSITKLIIKDFLILKGPCPNCGTENTSFFGTILSISSGGKTNTVK 299

Query: 299 CSNCGTDMEYDSKTRLITLPEGSNA 323
           C+NCGT M YDS +RLITLPEGS A
Sbjct: 300 CTNCGTAMVYDSGSRLITLPEGSQA 324


>AT4G22890.1 | Symbols: PGR5-LIKE A | PGR5-LIKE A |
           chr4:12007157-12009175 FORWARD
          Length = 324

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/325 (65%), Positives = 246/325 (75%), Gaps = 3/325 (0%)

Query: 1   MASKLAISLTSSGLSSAPIRKPVIXXXXXXXXXXXXXX-IQFN-GRHFCVRRRIFMLPIK 58
           M SK+  SLTS  L SA  RKP                  Q + G+   +RRR+F+LP K
Sbjct: 1   MGSKMLFSLTSPRLFSAVSRKPSSSFSPSPPSPSSRTQWTQLSPGKSISLRRRVFLLPAK 60

Query: 59  ATAXXXXXXXXXXXXXSKILQYCSIDRKEKRSIGEMEQEFLQALQSFYYEGKAIMSNEEF 118
           AT              S +L YCSI++ EK++IGEMEQEFLQALQSFYY+GKAIMSNEEF
Sbjct: 61  ATTEQSGPVGGDNVD-SNVLPYCSINKAEKKTIGEMEQEFLQALQSFYYDGKAIMSNEEF 119

Query: 119 DNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGKPILSDQEFDELKMRLKQEGSEIVVE 178
           DNLKEELMWEGSSVVMLSSDEQ+FLEASMAYVSG PIL+D+E+D+LK++LK +GS+IV E
Sbjct: 120 DNLKEELMWEGSSVVMLSSDEQRFLEASMAYVSGNPILNDEEYDKLKLKLKIDGSDIVSE 179

Query: 179 GPRCSLRSRKVYSDLSVDYLKMFLLYVPATVVAXXXXXXXXXXXXXEITYLLELPEPFSF 238
           GPRCSLRS+KVYSDL+VDY KM LL VPATVVA             EITY++ELPEP+SF
Sbjct: 180 GPRCSLRSKKVYSDLAVDYFKMLLLNVPATVVALGLFFFLDDITGFEITYIMELPEPYSF 239

Query: 239 IFTWFAAVPLIVWLAQSFTNAIVKDFLILKGPCPNCGTENLSFFGTILSVSSGGVTNMVK 298
           IFTWFAAVP+IV+LA S T  I+KDFLILKGPCPNCGTEN SFFGTILS+SSGG TN VK
Sbjct: 240 IFTWFAAVPVIVYLALSITKLIIKDFLILKGPCPNCGTENTSFFGTILSISSGGKTNTVK 299

Query: 299 CSNCGTDMEYDSKTRLITLPEGSNA 323
           C+NCGT M YDS +RLITLPEGS A
Sbjct: 300 CTNCGTAMVYDSGSRLITLPEGSQA 324


>AT4G11960.1 | Symbols: PGRL1B | PGRL1B (PGR5-Like B) |
           chr4:7175340-7177709 REVERSE
          Length = 313

 Score =  399 bits (1026), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/249 (77%), Positives = 214/249 (85%)

Query: 75  SKILQYCSIDRKEKRSIGEMEQEFLQALQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVM 134
           SKIL YCSI++ EKR+IGEMEQEFLQA+QSFYYEGKAIMSNEEFDNLKEELMWEGSSVVM
Sbjct: 65  SKILPYCSINKNEKRTIGEMEQEFLQAMQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVM 124

Query: 135 LSSDEQKFLEASMAYVSGKPILSDQEFDELKMRLKQEGSEIVVEGPRCSLRSRKVYSDLS 194
           LSSDEQ+FLEASMAYVSG PILSD+E+D+LKM+LK +GSEIV EGPRCSLRS+KVYSDL+
Sbjct: 125 LSSDEQRFLEASMAYVSGNPILSDEEYDKLKMKLKMDGSEIVCEGPRCSLRSKKVYSDLA 184

Query: 195 VDYLKMFLLYVPATVVAXXXXXXXXXXXXXEITYLLELPEPFSFIFTWFAAVPLIVWLAQ 254
           +DY KMFLL VPATVVA             EITYLLELPEPFSFIFTWFAAVP IV+LA 
Sbjct: 185 IDYFKMFLLNVPATVVALGLFFFLDDITGFEITYLLELPEPFSFIFTWFAAVPAIVYLAL 244

Query: 255 SFTNAIVKDFLILKGPCPNCGTENLSFFGTILSVSSGGVTNMVKCSNCGTDMEYDSKTRL 314
           S T  I+KDFLILKGPCPNCGTEN+SFFGTILS+ +   TN VKCS CGT+M YDS +RL
Sbjct: 245 SLTKLILKDFLILKGPCPNCGTENVSFFGTILSIPNDSNTNNVKCSGCGTEMVYDSGSRL 304

Query: 315 ITLPEGSNA 323
           ITLPEG  A
Sbjct: 305 ITLPEGGKA 313


>AT5G59400.1 | Symbols:  | unknown protein | chr5:23957756-23959518
           FORWARD
          Length = 299

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 83/200 (41%), Gaps = 34/200 (17%)

Query: 139 EQKFLEASMAYVSGKPILSDQEFDELKMRLKQEGSEIVVEGPRCSLRSRKVYSDLSVDYL 198
           E  + +A  AY +GKP++ D  FD ++++L+  GS+ VV+ PRCSL  +  Y+D   D  
Sbjct: 75  EALYRQAKDAYYNGKPLIVDDMFDRVELKLRWYGSKSVVKYPRCSLLRQSTYADAEDDAS 134

Query: 199 KMFLLYVPATVVAXXXXXXXXXXXXXEI--TYLLELPEPFSF-------------IFTWF 243
           ++ LL   ATV                I    L+   +PF               I + F
Sbjct: 135 QVLLL---ATVWIMIFLFGSSACVLPTIYGVGLVYGGDPFDSGLVYSSQLSSSVPILSKF 191

Query: 244 AAVPLIVWLAQSFTNAIV------------KDFLILKGPCPNCGTENLSFFGTILSVSSG 291
             + L V L  +F   I              D   LKG CPNCG E  +F   + S  S 
Sbjct: 192 NGILLSV-LGPAFGYPIASSAVRVLKGLWRNDLTALKGDCPNCGEEVFAF---VRSDQSN 247

Query: 292 GVTNMVKCSNCGTDMEYDSK 311
              +   C  C   +E+ +K
Sbjct: 248 RSAHKADCHVCECTLEFRTK 267


>AT5G59400.2 | Symbols:  | unknown protein | chr5:23957756-23959518
           FORWARD
          Length = 301

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 83/200 (41%), Gaps = 34/200 (17%)

Query: 139 EQKFLEASMAYVSGKPILSDQEFDELKMRLKQEGSEIVVEGPRCSLRSRKVYSDLSVDYL 198
           E  + +A  AY +GKP++ D  FD ++++L+  GS+ VV+ PRCSL  +  Y+D   D  
Sbjct: 75  EALYRQAKDAYYNGKPLIVDDMFDRVELKLRWYGSKSVVKYPRCSLLRQSTYADAEDDAS 134

Query: 199 KMFLLYVPATVVAXXXXXXXXXXXXXEI--TYLLELPEPFSF-------------IFTWF 243
           ++ LL   ATV                I    L+   +PF               I + F
Sbjct: 135 QVLLL---ATVWIMIFLFGSSACVLPTIYGVGLVYGGDPFDSGLVYSSQLSSSVPILSKF 191

Query: 244 AAVPLIVWLAQSFTNAIV------------KDFLILKGPCPNCGTENLSFFGTILSVSSG 291
             + L V L  +F   I              D   LKG CPNCG E  +F   + S  S 
Sbjct: 192 NGILLSV-LGPAFGYPIASSAVRVLKGLWRNDLTALKGDCPNCGEEVFAF---VRSDQSN 247

Query: 292 GVTNMVKCSNCGTDMEYDSK 311
              +   C  C   +E+ +K
Sbjct: 248 RSAHKADCHVCECTLEFRTK 267