Jatropha Genome Database

JcCA0007981.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0007981.30 + phase: 1 /TE
         (882 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   331   1e-90
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   130   5e-30
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    92   1e-18
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    57   5e-08

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  331 bits (849), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 174/468 (37%), Positives = 271/468 (57%), Gaps = 15/468 (3%)

Query: 372 WIEAMNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTKRDSQGNVERYKARFVAKGFTQ 431
           W  AM++E  +M+    W++  L   KKPIGCKW++K K +S G +ERYKAR VAKG+TQ
Sbjct: 98  WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157

Query: 432 KEGIDYKETFSPVSSKDSFRTIMALVANLDLELHQMDVKTAFLNGDIDETIYMVQPENFV 491
           +EGID+ ETFSPV    S + I+A+ A  +  LHQ+D+  AFLNGD+DE IYM  P  + 
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217

Query: 492 I--GD--PKHLVCKLKKSIYGLKQASRQWYFKFNQVIVSFGFEANAVENCVYHKFSGSRF 547
              GD  P + VC LKKSIYGLKQASRQW+ KF+  ++ FGF  +  ++  + K + + F
Sbjct: 218 ARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLF 277

Query: 548 IFLVLYVDDILLATNWKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRDRSRGILGLSQ 607
           + +++YVDDI++ +N    + E K  L   F+++DLG   + LG++I   RS   + + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQ 335

Query: 608 KSYIDKVLKRFSMQNSRPLDTPIAKGDKFSNQQCPKSELEIQEMQKVPYASAVGSLMYVQ 667
           + Y   +L    +   +P   P+     FS      S  +  + +   Y   +G LMY+Q
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAH----SGGDFVDAKA--YRRLIGRLMYLQ 389

Query: 668 VCTRPDISFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGHMLTYRRSDQLEIIGYTDS 727
           + TR DISF V  L ++   P + H +A  +++ Y+  T G  L Y    ++++  ++D+
Sbjct: 390 I-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448

Query: 728 DFAGCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQTIWLRNLV 787
            F  C+D+R+ST+GY   L    ISWKS KQ +V+ S+ EAE+ A   A+++ +WL    
Sbjct: 449 SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 508

Query: 788 TGLRVVGGIERPLKLYCDSRSAVLFXXXXXXXXXXKHIEIKFLAMKER 835
             L++   + +P  L+CD+ +A+            KHIE    +++ER
Sbjct: 509 RELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
           chrM:227709-228431 REVERSE
          Length = 240

 Score =  130 bits (326), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 548 IFLVLYVDDILLATNWKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRDRSRGILGLSQ 607
           ++L+LYVDDILL  +   LL+     LS  F MKDLG   + LGIQI    S   L LSQ
Sbjct: 1   MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58

Query: 608 KSYIDKVLKRFSMQNSRPLDTPIAK--GDKFSNQQCPKSELEIQEMQKVPYASAVGSLMY 665
             Y +++L    M + +P+ TP+        S  + P             + S VG+L Y
Sbjct: 59  TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPS---------DFRSIVGALQY 109

Query: 666 VQVCTRPDISFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGHMLTYRRSDQLEIIGYT 725
           + + TRPDIS+ V ++ + +  P +  +   KRV+RY+  T  H L   ++ +L +  + 
Sbjct: 110 LTL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFC 168

Query: 726 DSDFAGCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQTIW 782
           DSD+AGC  +R+ST+G+   L    ISW + +Q  V+ S+ E E+ A    + +  W
Sbjct: 169 DSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 3/110 (2%)

Query: 353 IDDDPVSFYHAMQSSDSHKWIEAMNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTKRD 412
           I  +P S   A++      W +AM EE  ++  N+ W LV     +  +GCKW+FKTK  
Sbjct: 24  IKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLH 80

Query: 413 SQGNVERYKARFVAKGFTQKEGIDYKETFSPVSSKDSFRTIMALVANLDL 462
           S G ++R KAR VAKGF Q+EGI + ET+SPV    + RTI+ +   L++
Sbjct: 81  SDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
           chrM:68918-69253 REVERSE
          Length = 111

 Score = 57.0 bits (136), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 664 MYVQVCTRPDISFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGHMLTYRRSDQLEIIG 723
           MY+ + TRPD++F V  L ++ S       +A  +V+ Y+  T G  L Y  +  L++  
Sbjct: 1   MYLTI-TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59

Query: 724 YTDSDFAGCQDSRKSTSGYIFLL 746
           + DSD+A C D+R+S +G+  L+
Sbjct: 60  FADSDWASCPDTRRSVTGFCSLV 82