Jatropha Genome Database

JcCA0006671.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0006671.30 - phase: 0 
         (157 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02550.1 | Symbols:  | invertase/pectin methylesterase inhibi...    50   7e-07

>AT1G02550.1 | Symbols:  | invertase/pectin methylesterase inhibitor
           family protein | chr1:536483-537211 FORWARD
          Length = 242

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 71/154 (46%), Gaps = 9/154 (5%)

Query: 3   VDPSLKEICAVTEKPAKCVSCLAPFLAG------SPTDAVTVLNMFIEAIYKHVERSISL 56
           V P++  +C+ T+  A+C+  + P L         P D   VL M + A+Y+    ++ L
Sbjct: 88  VSPAVGSVCSNTDYAAECIVSILPLLRDFRKFEPKPID---VLRMEMSALYEKANATLDL 144

Query: 57  LEKETKKPSQLPVLTTCLDTCIESYDKIKIELVKAEDSCAAHDVDXXXXXXXXXISKFGQ 116
            ++     S    +   LD C+++Y+ +  +L  A  +    D +         I+    
Sbjct: 145 AKRLIVDKSTPRDVADVLDLCVDNYESLLDDLKDASVAVDDGDFERLESVVSAAIADVVT 204

Query: 117 CDESFHKNGMGESPMSEIDEILIELVGFAVDVSQ 150
           C ++F ++   ESPM+ +D+ L +L    + +SQ
Sbjct: 205 CSDAFAESSELESPMANVDDFLKKLCSNVLAISQ 238