Jatropha Genome Database

JcCA0006671.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0006671.20 - phase: 0 
         (236 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02550.1 | Symbols:  | invertase/pectin methylesterase inhibi...    66   1e-11
AT2G47340.1 | Symbols:  | invertase/pectin methylesterase inhibi...    57   7e-09
AT3G36659.1 | Symbols:  | invertase/pectin methylesterase inhibi...    54   1e-07

>AT1G02550.1 | Symbols:  | invertase/pectin methylesterase inhibitor
           family protein | chr1:536483-537211 FORWARD
          Length = 242

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 4/158 (2%)

Query: 74  TVKVDPKIKRICAATESPEKCISLITPYLEG----SVNPVSTLKAIIKMLQVTVEDTSKI 129
           ++ V P +  +C+ T+   +CI  I P L         P+  L+  +  L      T  +
Sbjct: 85  SLHVSPAVGSVCSNTDYAAECIVSILPLLRDFRKFEPKPIDVLRMEMSALYEKANATLDL 144

Query: 130 AKDVRADVSTSSAIKGALDANLDLYDRAIDNLAEASSAFSAGDFPKVKDMLGAAISNLGY 189
           AK +  D ST   +   LD  +D Y+  +D+L +AS A   GDF +++ ++ AAI+++  
Sbjct: 145 AKRLIVDKSTPRDVADVLDLCVDNYESLLDDLKDASVAVDDGDFERLESVVSAAIADVVT 204

Query: 190 CNDAFLKNGLLSWPLKETNELMIEFAGYGIDISSKLRL 227
           C+DAF ++  L  P+   ++ + +     + IS  + +
Sbjct: 205 CSDAFAESSELESPMANVDDFLKKLCSNVLAISQMIHM 242


>AT2G47340.1 | Symbols:  | invertase/pectin methylesterase inhibitor
           family protein | chr2:19432168-19433016 FORWARD
          Length = 282

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 9/162 (5%)

Query: 74  TVKVDPKIKRICAATESPEKCISLITPYLE---------GSVNPVSTLKAIIKMLQVTVE 124
           ++K+D   K +C  T+   +CI+ I P L+         G + P   ++   + L     
Sbjct: 119 SMKIDTTAKDLCKNTDYNNECIAAILPDLQKQAEGEGGDGGIAPKDVMRMEAESLLKKAN 178

Query: 125 DTSKIAKDVRADVSTSSAIKGALDANLDLYDRAIDNLAEASSAFSAGDFPKVKDMLGAAI 184
            T   AK V  D  T   +K A+   ++ YD  I  L +A  A   GD+ ++  +L AAI
Sbjct: 179 ATLDYAKRVVEDRKTPMPVKEAMSVCVENYDSLISGLEDAKMAMEEGDYGRLDSVLSAAI 238

Query: 185 SNLGYCNDAFLKNGLLSWPLKETNELMIEFAGYGIDISSKLR 226
           S++  C+D F+    +  P    ++LM +     + +S K++
Sbjct: 239 SDVSTCSDNFVDIPDVDSPTASLDDLMKKLCSNVLAMSQKVQ 280


>AT3G36659.1 | Symbols:  | invertase/pectin methylesterase inhibitor
           family protein | chr3:2100189-2100983 FORWARD
          Length = 264

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 14/122 (11%)

Query: 79  PKIKRICAATESPEKCISLITPYLEGSVNPVSTLKAIIKMLQVTVEDTSKIAKDVRADVS 138
           P+IK IC  T++P  C S ++P L   + P +T   +I  +Q ++  T            
Sbjct: 128 PEIKTICGKTDNPPLCESSVSPLLTPQLKP-NTSSVLILAIQASITATK----------- 175

Query: 139 TSSAIKGALDAN--LDLYDRAIDNLAEASSAFSAGDFPKVKDMLGAAISNLGYCNDAFLK 196
            + AI   +DA+   +LYD A+ NL +A +A  + D   V   L AA+++   CND F +
Sbjct: 176 AAMAIVEKVDASDCQELYDDAVVNLEDAVNAVKSSDIATVNTNLSAAMTDYSTCNDGFEE 235

Query: 197 NG 198
           +G
Sbjct: 236 SG 237