Jatropha Genome Database

JcCA0006671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0006671.10 - phase: 0 /TE
         (1335 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   309   1e-83
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   140   4e-33
ATMG00300.1 | Symbols: ORF145A | hypothetical protein | chrM:896...   120   7e-27
ATMG00710.1 | Symbols: ORF120 | hypothetical protein | chrM:2075...    94   6e-19
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    91   6e-18

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  309 bits (791), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 179/485 (36%), Positives = 275/485 (56%), Gaps = 21/485 (4%)

Query: 800  EPHTYSEAISCPNSSEWQVAMQEEIESLHKNDTWKLVKLPKGQRVVGCKWVYKKKEGNPG 859
            EP TY+EA        W  AM +EI ++    TW++  LP  ++ +GCKWVYK K  + G
Sbjct: 85   EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141

Query: 860  VEDARYKARLVAKGYTQKHGVDFNEVFSPVVRHTSIRVXXXXXXXXXXXXXXXDVKTAFL 919
              + RYKARLVAKGYTQ+ G+DF E FSPV + TS+++               D+  AFL
Sbjct: 142  TIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200

Query: 920  HGELEEQIYMQQPEGFVVPGKE----DYVCHLKKSLYGLKQSPRQWYKRFDSFMVEHGYC 975
            +G+L+E+IYM+ P G+     +    + VC+LKKS+YGLKQ+ RQW+ +F   ++  G+ 
Sbjct: 201  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 260

Query: 976  RSQYDNCVYHKKFSNGSFVYLLLYVDDMLIAARDKSLIKELKDQLSSEFEMKDLGAAKKI 1035
            +S  D+  Y  K +   F+ +L+YVDD++I + + + + ELK QL S F+++DLG  K  
Sbjct: 261  QSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 319

Query: 1036 LGMEILRDRSAGKLYLSQRNYIEKVLERFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKE 1095
            LG+EI   RSA  + + QR Y   +L+   +   KP S P+      S      ++   +
Sbjct: 320  LGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS------AHSGGD 371

Query: 1096 QLSHVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMSNPGKEHWQAVKWIFRYLKGSVDT 1155
             +    Y   +G LMY  + TR D++ AV+ +S++   P   H QAV  I  Y+KG+V  
Sbjct: 372  FVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQ 430

Query: 1156 GLVFDRNKVNPNIVIGYVDSDYAGDLDKRRSLSGYVFTLYNSAISWKASLQSIVALSTTE 1215
            GL F  ++    + + + D+ +    D RRS +GY   L  S ISWK+  Q +V+ S+ E
Sbjct: 431  GL-FYSSQAEMQLQV-FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488

Query: 1216 AEYIAITEGVKEAIWLRGLVSDLGLTQDVVT-VFCDSQSAIHLTKNQMYHERTKHIDVRQ 1274
            AEY A++    E +WL     +L L     T +FCD+ +AIH+  N ++HERTKHI+   
Sbjct: 489  AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548

Query: 1275 YFIRD 1279
            + +R+
Sbjct: 549  HSVRE 553


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  140 bits (354), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/238 (38%), Positives = 131/238 (55%), Gaps = 14/238 (5%)

Query: 994  VYLLLYVDDMLIAARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQ 1053
            +YLLLYVDD+L+     +L+  L  QLSS F MKDLG     LG++I +   +G L+LSQ
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI-KTHPSG-LFLSQ 58

Query: 1054 RNYIEKVLERFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVPYSSAVGSLMYAM 1113
              Y E++L    M + KP+STPL    KL+S        +        + S VG+L Y +
Sbjct: 59   TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSD-----FRSIVGALQY-L 110

Query: 1114 VCTRPDLAQAVSVVSRYMSNPGKEHWQAVKWIFRYLKGSVDTGLVFDRN-KVNPNIVIGY 1172
              TRPD++ AV++V + M  P    +  +K + RY+KG++  GL   +N K+N   V  +
Sbjct: 111  TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN---VQAF 167

Query: 1173 VDSDYAGDLDKRRSLSGYVFTLYNSAISWKASLQSIVALSTTEAEYIAITEGVKEAIW 1230
             DSD+AG    RRS +G+   L  + ISW A  Q  V+ S+TE EY A+     E  W
Sbjct: 168  CDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>ATMG00300.1 | Symbols: ORF145A | hypothetical protein |
           chrM:89617-90054 REVERSE
          Length = 145

 Score =  120 bits (301), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 75/119 (63%), Gaps = 2/119 (1%)

Query: 374 GVLKVSKGALILMKANRSGSLYVLQGSTVISSVTVSLFMSDSDVTKLWHMRLGHMSEKGM 433
           GVLKV KG   ++K NR  SLY+LQGS  + +   +L  +  D T+LWH RL HMS++GM
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGS--VETGESNLAETAKDETRLWHSRLAHMSQRGM 84

Query: 434 TILSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRVPL 492
            +L K+G L       L+FCE CI GK  R+ F  G H TK  LDY+HSDLWG   VPL
Sbjct: 85  ELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSVPL 143


>ATMG00710.1 | Symbols: ORF120 | hypothetical protein |
           chrM:207553-207915 REVERSE
          Length = 120

 Score = 94.0 bits (232), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 61/83 (73%)

Query: 584 MNMTLMERVRCMLSNVALPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVWTGNPVDYSN 643
           MN T++E+VR ML    LPK F A+AA+TA +++N+ P T+++F +P+EVW  +   YS 
Sbjct: 1   MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60

Query: 644 LKIFGCPAYAHINQGKLEPRARK 666
           L+ FGC AY H ++GKL+PRA+K
Sbjct: 61  LRRFGCVAYIHCDEGKLKPRAKK 83


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 90.5 bits (223), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 67/110 (60%), Gaps = 6/110 (5%)

Query: 787 YALAVAEDTVEGGEPHTYSEAISCPNSSEWQVAMQEEIESLHKNDTWKLVKLPKGQRVVG 846
           Y+L +   T    EP +   A+  P    W  AMQEE+++L +N TW LV  P  Q ++G
Sbjct: 16  YSLTIT--TTIKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILG 70

Query: 847 CKWVYKKKEGNPGVEDARYKARLVAKGYTQKHGVDFNEVFSPVVRHTSIR 896
           CKWV+K K  + G  D R KARLVAKG+ Q+ G+ F E +SPVVR  +IR
Sbjct: 71  CKWVFKTKLHSDGTLD-RLKARLVAKGFHQEEGIYFVETYSPVVRTATIR 119