Jatropha Genome Database

JcCA0003212.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0003212.10 - phase: 0 
         (619 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45320.1 | Symbols:  | unknown protein | chr2:18684182-186861...   392   e-109
AT2G45330.1 | Symbols: emb1067 | emb1067 (embryo defective 1067)...   342   5e-94
AT2G45330.2 | Symbols: emb1067 | emb1067 (embryo defective 1067)...   342   6e-94
AT5G23600.1 | Symbols:  | tRNA 2'phosphotransferase, putative | ...   333   3e-91

>AT2G45320.1 | Symbols:  | unknown protein | chr2:18684182-18686107
           REVERSE
          Length = 392

 Score =  392 bits (1008), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/341 (60%), Positives = 235/341 (68%), Gaps = 56/341 (16%)

Query: 326 NNKSDHLVLGPAAGQGLPNRLQCQGSRALNKTHLLNPSSASNVGESVAFVTVFTIYNTSL 385
           N K DHLVLGP AGQGL +R  C+G++ALNKTH  + S  S  G  V+FVTVFT+YNTSL
Sbjct: 53  NKKLDHLVLGPVAGQGLSDRFHCRGTKALNKTHG-STSHVSGAGNGVSFVTVFTVYNTSL 111

Query: 386 DSHADSRSSNLVTV-GNVSYSKTQRSMAILNIFINFIQ---------------------- 422
               + +SSN V+V GNV+YSK +RSMA+LN F NFIQ                      
Sbjct: 112 ---GNVKSSNPVSVVGNVTYSKPERSMAVLNAFANFIQVTMPKSNVVILTDPASDLSIQQ 168

Query: 423 --------------------------TFLNTRLNGLAQHPQHKNHYIFTDSDIAVVDDLK 456
                                     TFL  +L    ++    NHYIFTDSDIAVVDD+ 
Sbjct: 169 SNVILQPVQGDYSRGNLMLQRIRSYITFLEMKLE---KNEGGINHYIFTDSDIAVVDDVG 225

Query: 457 HIFHKFPNFHLALTFRNNKDQPLNSGFIAVRGTPESILRAKIFLEEVLEVYTSKYMNASR 516
            IF K  +FHLALTFRNNKDQPLNSGFIAVRGT E ILRAK+FLEEVL+ Y +KYM ASR
Sbjct: 226 TIFDKHSSFHLALTFRNNKDQPLNSGFIAVRGTREGILRAKVFLEEVLKAYKTKYMKASR 285

Query: 517 MLGDQLALAWIIKSHPSFDLRRFRKAQAFVEEVGGASVLFLPCATYNWTPPEGAGQFRGM 576
           MLGDQLAL  ++KSH SFD +RF K QAF EE+ GASVLFLPCA YNWTPPEGAGQF GM
Sbjct: 286 MLGDQLALVSVVKSHASFDAKRFTKPQAFTEEIAGASVLFLPCALYNWTPPEGAGQFHGM 345

Query: 577 PLDVKVVHFKGSRKRLMLESWNFFSSTSDISDMLCLILTSG 617
           PLDVK+VHFKGSRKRLMLE+WNF+ STS+I DMLCL+L SG
Sbjct: 346 PLDVKIVHFKGSRKRLMLEAWNFYKSTSNIPDMLCLVLGSG 386


>AT2G45330.1 | Symbols: emb1067 | emb1067 (embryo defective 1067);
           tRNA 2'-phosphotransferase/ transferase, transferring
           phosphorus-containing groups | chr2:18686340-18687874
           FORWARD
          Length = 289

 Score =  342 bits (876), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 155/204 (75%), Positives = 187/204 (91%)

Query: 90  ALGRLLTRVLRHMASELSLNMRSDGYVKVQDLLKLNMKTFADIPLRAHTVDDIKEAVRKD 149
           ALGRLLTR+LRHMA+EL LNMR DG+VKV+DLL LN+KT A+I L++HT+D+I+EAVR+D
Sbjct: 86  ALGRLLTRILRHMATELRLNMRGDGFVKVEDLLNLNLKTSANIQLKSHTIDEIREAVRRD 145

Query: 150 NKQRFSLLEENGELLIRANQGHTIKAVESESLLKPILSADEVPVCVHGTYKKNVESILNS 209
           NKQRFSL++ENGELLIRANQGH+I  VESE LLKPILS +E PVCVHGTY+KN+ESIL S
Sbjct: 146 NKQRFSLIDENGELLIRANQGHSITTVESEKLLKPILSPEEAPVCVHGTYRKNLESILAS 205

Query: 210 GLKRMQRLHVHFSCGLPTDGEVISGMRRDVNVLVYLNVKKALEEGMKLYISDNRVILTEG 269
           GLKRM R+HVHFSCGLPTDGEVISGMRR+VNV+++L++KKALE+G+  YISDN+VILTEG
Sbjct: 206 GLKRMNRMHVHFSCGLPTDGEVISGMRRNVNVIIFLDIKKALEDGIAFYISDNKVILTEG 265

Query: 270 FDGVVPVKYFEKIESWPERRPIPF 293
            DGV+PV YF+KIESWP+R+ IPF
Sbjct: 266 IDGVLPVDYFQKIESWPDRQSIPF 289


>AT2G45330.2 | Symbols: emb1067 | emb1067 (embryo defective 1067);
           tRNA 2'-phosphotransferase/ transferase, transferring
           phosphorus-containing groups | chr2:18686340-18687874
           FORWARD
          Length = 286

 Score =  342 bits (876), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 155/204 (75%), Positives = 187/204 (91%)

Query: 90  ALGRLLTRVLRHMASELSLNMRSDGYVKVQDLLKLNMKTFADIPLRAHTVDDIKEAVRKD 149
           ALGRLLTR+LRHMA+EL LNMR DG+VKV+DLL LN+KT A+I L++HT+D+I+EAVR+D
Sbjct: 83  ALGRLLTRILRHMATELRLNMRGDGFVKVEDLLNLNLKTSANIQLKSHTIDEIREAVRRD 142

Query: 150 NKQRFSLLEENGELLIRANQGHTIKAVESESLLKPILSADEVPVCVHGTYKKNVESILNS 209
           NKQRFSL++ENGELLIRANQGH+I  VESE LLKPILS +E PVCVHGTY+KN+ESIL S
Sbjct: 143 NKQRFSLIDENGELLIRANQGHSITTVESEKLLKPILSPEEAPVCVHGTYRKNLESILAS 202

Query: 210 GLKRMQRLHVHFSCGLPTDGEVISGMRRDVNVLVYLNVKKALEEGMKLYISDNRVILTEG 269
           GLKRM R+HVHFSCGLPTDGEVISGMRR+VNV+++L++KKALE+G+  YISDN+VILTEG
Sbjct: 203 GLKRMNRMHVHFSCGLPTDGEVISGMRRNVNVIIFLDIKKALEDGIAFYISDNKVILTEG 262

Query: 270 FDGVVPVKYFEKIESWPERRPIPF 293
            DGV+PV YF+KIESWP+R+ IPF
Sbjct: 263 IDGVLPVDYFQKIESWPDRQSIPF 286


>AT5G23600.1 | Symbols:  | tRNA 2'phosphotransferase, putative |
           chr5:7955994-7956632 FORWARD
          Length = 212

 Score =  333 bits (853), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 151/208 (72%), Positives = 188/208 (90%)

Query: 86  DKIDALGRLLTRVLRHMASELSLNMRSDGYVKVQDLLKLNMKTFADIPLRAHTVDDIKEA 145
           D+IDALGR+LTR+LRHMA+EL LNMR DG+VKV+DLL LN+KT A+I L +HT+D+I+EA
Sbjct: 5   DRIDALGRILTRILRHMATELRLNMRGDGFVKVEDLLNLNLKTCANIQLNSHTIDEIREA 64

Query: 146 VRKDNKQRFSLLEENGELLIRANQGHTIKAVESESLLKPILSADEVPVCVHGTYKKNVES 205
           V +DNK+RFSL++E+GELLIRANQGH+I  VESE LLKPILS +E PVCVHGTY+KN+ES
Sbjct: 65  VTRDNKKRFSLIDEDGELLIRANQGHSITTVESEKLLKPILSPEEAPVCVHGTYRKNLES 124

Query: 206 ILNSGLKRMQRLHVHFSCGLPTDGEVISGMRRDVNVLVYLNVKKALEEGMKLYISDNRVI 265
           IL SGLKRM R+HVHFSCGLPTDGEVISG+RR+VNV+++L++KKALE+G+  YISDN+VI
Sbjct: 125 ILASGLKRMNRMHVHFSCGLPTDGEVISGVRRNVNVIIFLHIKKALEDGIAFYISDNKVI 184

Query: 266 LTEGFDGVVPVKYFEKIESWPERRPIPF 293
           LT+G  GV+PV YF+KIESWP+R+ IPF
Sbjct: 185 LTQGIVGVLPVDYFQKIESWPDRQSIPF 212