Jatropha Genome Database
- JcCA0000831.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0000831.30 + phase: 0
(502 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATCG00480.1 | Symbols: ATPB | chloroplast-encoded gene for beta ... 920 0.0
AT5G08680.1 | Symbols: | ATP synthase beta chain, mitochondrial... 652 0.0
AT5G08690.1 | Symbols: | ATP synthase beta chain 2, mitochondri... 652 0.0
AT5G08670.1 | Symbols: | ATP binding / hydrogen ion transportin... 651 0.0
AT1G78900.2 | Symbols: VHA-A | VHA-A (VACUOLAR ATP SYNTHASE SUBU... 114 2e-25
AT1G78900.1 | Symbols: VHA-A | VHA-A (VACUOLAR ATP SYNTHASE SUBU... 114 2e-25
AT1G20260.1 | Symbols: | hydrogen ion transporting ATP synthase... 111 1e-24
AT1G76030.1 | Symbols: | vacuolar ATP synthase subunit B / V-AT... 110 3e-24
AT4G38510.4 | Symbols: | vacuolar ATP synthase subunit B, putat... 109 4e-24
AT4G38510.3 | Symbols: | vacuolar ATP synthase subunit B, putat... 109 4e-24
AT4G38510.2 | Symbols: | vacuolar ATP synthase subunit B, putat... 109 4e-24
AT4G38510.1 | Symbols: | vacuolar ATP synthase subunit B, putat... 109 4e-24
ATCG00120.1 | Symbols: ATPA | Encodes the ATPase alpha subunit, ... 91 1e-18
ATMG01190.1 | Symbols: ATP1 | ATPase subunit 1 | chrM:302166-303... 90 4e-18
AT2G07698.1 | Symbols: | ATP synthase alpha chain, mitochondria... 87 3e-17
>ATCG00480.1 | Symbols: ATPB | chloroplast-encoded gene for beta
subunit of ATP synthase | chrC:52660-54156 REVERSE
Length = 498
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/492 (94%), Positives = 479/492 (97%)
Query: 1 MRINPTTSGPGVPALEKKNLGRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTVGQEIN 60
MR NPTTS P V EKKNLGRIAQIIGPVLDVAF PGKMPNIYNALVVKGRDT+GQEIN
Sbjct: 1 MRTNPTTSNPEVSIREKKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTLGQEIN 60
Query: 61 VTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDD 120
VTCEVQQLLGNNRVRAVAMSAT+GL RGM+V+D G PLSVPVGGATLGRIFNVLGEPVD+
Sbjct: 61 VTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDN 120
Query: 121 LGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 180
LGPVDTR TSPIH+SAPAFI+LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV
Sbjct: 121 LGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 180
Query: 181 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMN 240
LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN++N+AESKVALVYGQMN
Sbjct: 181 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMN 240
Query: 241 EPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQP 300
EPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQP
Sbjct: 241 EPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQP 300
Query: 301 TLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKG 360
TLSTEMG+LQERITSTK+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKG
Sbjct: 301 TLSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKG 360
Query: 361 IYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLT 420
IYPAVDPLDSTSTMLQP+IVGEEHYETAQ+VKQTLQRYKELQDIIAILGLDELSEEDRLT
Sbjct: 361 IYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLT 420
Query: 421 VARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDSLPEQAFYLVGNI 480
VARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGE DSLPEQAFYLVGNI
Sbjct: 421 VARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNI 480
Query: 481 DEATAKATNLEL 492
DEATAKATNLE+
Sbjct: 481 DEATAKATNLEM 492
>AT5G08680.1 | Symbols: | ATP synthase beta chain, mitochondrial,
putative | chr5:2821992-2824683 FORWARD
Length = 559
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/476 (68%), Positives = 380/476 (79%), Gaps = 7/476 (1%)
Query: 17 KKNLGRIAQIIGPVLDVAFSPGK-MPNIYNALVVKGRDTVGQEINVTCEVQQLLGNNRVR 75
K +GR+ Q+IG ++DV F + +P I +L V+ T + EV LG N VR
Sbjct: 83 KGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPT-----RLVLEVSHHLGQNVVR 137
Query: 76 AVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRATSPIHRS 135
+AM T+GL RG +V++TGAP++VPVG ATLGRI NVLGEP+D+ G + T PIHR
Sbjct: 138 TIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRD 197
Query: 136 APAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 195
APA + L T I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAHGG
Sbjct: 198 APALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 257
Query: 196 VSVFGGVGERTREGNDLYMEMKESGVIN-QENIAESKVALVYGQMNEPPGARMRVGLTAL 254
SVF GVGERTREGNDLY EM ESGVI E +ESK ALVYGQMNEPPGAR RVGLT L
Sbjct: 258 FSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGL 317
Query: 255 TMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIT 314
T+AEYFRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL++++G+LQERIT
Sbjct: 318 TVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGALQERIT 377
Query: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374
+TK+GSITS+QA+YVPADDLTDPAPATTFAHLDATTVLSR ++ GIYPAVDPLDSTS M
Sbjct: 378 TTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 437
Query: 375 LQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQP 434
L P I+GEEHY TA+ V++ LQ YK LQDIIAILG+DELSE+D+LTVARARKI+RFLSQP
Sbjct: 438 LSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQP 497
Query: 435 FFVAEVFTGSPGKYVGLAETIRGFKLILSGELDSLPEQAFYLVGNIDEATAKATNL 490
F VAE+FTG+PGKYV L E I F+ +L G+ D L EQ+FY+VG IDE AKA +
Sbjct: 498 FHVAEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVAKAEKI 553
>AT5G08690.1 | Symbols: | ATP synthase beta chain 2, mitochondrial
| chr5:2825739-2828352 FORWARD
Length = 556
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/476 (68%), Positives = 380/476 (79%), Gaps = 7/476 (1%)
Query: 17 KKNLGRIAQIIGPVLDVAFSPGK-MPNIYNALVVKGRDTVGQEINVTCEVQQLLGNNRVR 75
K +GR+ Q+IG ++DV F + +P I +L V+ T + EV LG N VR
Sbjct: 80 KGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPT-----RLVLEVSHHLGQNVVR 134
Query: 76 AVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRATSPIHRS 135
+AM T+GL RG +V++TGAP++VPVG ATLGRI NVLGEP+D+ G + T PIHR
Sbjct: 135 TIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRD 194
Query: 136 APAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 195
APA + L T I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAHGG
Sbjct: 195 APALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 254
Query: 196 VSVFGGVGERTREGNDLYMEMKESGVIN-QENIAESKVALVYGQMNEPPGARMRVGLTAL 254
SVF GVGERTREGNDLY EM ESGVI E +ESK ALVYGQMNEPPGAR RVGLT L
Sbjct: 255 FSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGL 314
Query: 255 TMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIT 314
T+AEYFRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL++++G+LQERIT
Sbjct: 315 TVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGALQERIT 374
Query: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374
+TK+GSITS+QA+YVPADDLTDPAPATTFAHLDATTVLSR ++ GIYPAVDPLDSTS M
Sbjct: 375 TTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 434
Query: 375 LQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQP 434
L P I+GEEHY TA+ V++ LQ YK LQDIIAILG+DELSE+D+LTVARARKI+RFLSQP
Sbjct: 435 LSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQP 494
Query: 435 FFVAEVFTGSPGKYVGLAETIRGFKLILSGELDSLPEQAFYLVGNIDEATAKATNL 490
F VAE+FTG+PGKYV L E I F+ +L G+ D L EQ+FY+VG IDE AKA +
Sbjct: 495 FHVAEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVAKAEKI 550
>AT5G08670.1 | Symbols: | ATP binding / hydrogen ion transporting
ATP synthase, rotational mechanism |
chr5:2818395-2821149 REVERSE
Length = 556
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/476 (68%), Positives = 380/476 (79%), Gaps = 7/476 (1%)
Query: 17 KKNLGRIAQIIGPVLDVAFSPGK-MPNIYNALVVKGRDTVGQEINVTCEVQQLLGNNRVR 75
K +GR+ Q+IG ++DV F + +P I +L V+ T + EV LG N VR
Sbjct: 80 KGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPT-----RLVLEVSHHLGQNVVR 134
Query: 76 AVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRATSPIHRS 135
+AM T+GL RG +V++TGAP++VPVG ATLGRI NVLGEP+D+ G + T PIHR
Sbjct: 135 TIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRD 194
Query: 136 APAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 195
APA + L T I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAHGG
Sbjct: 195 APALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 254
Query: 196 VSVFGGVGERTREGNDLYMEMKESGVIN-QENIAESKVALVYGQMNEPPGARMRVGLTAL 254
SVF GVGERTREGNDLY EM ESGVI E +ESK ALVYGQMNEPPGAR RVGLT L
Sbjct: 255 FSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGL 314
Query: 255 TMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIT 314
T+AEYFRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL++++G+LQERIT
Sbjct: 315 TVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGALQERIT 374
Query: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374
+TK+GSITS+QA+YVPADDLTDPAPATTFAHLDATTVLSR ++ GIYPAVDPLDSTS M
Sbjct: 375 TTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 434
Query: 375 LQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQP 434
L P I+GEEHY TA+ V++ LQ YK LQDIIAILG+DELSE+D+LTVARARKI+RFLSQP
Sbjct: 435 LSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQP 494
Query: 435 FFVAEVFTGSPGKYVGLAETIRGFKLILSGELDSLPEQAFYLVGNIDEATAKATNL 490
F VAE+FTG+PGKYV L E I F+ +L G+ D L EQ+FY+VG IDE AKA +
Sbjct: 495 FHVAEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVAKAEKI 550
>AT1G78900.2 | Symbols: VHA-A | VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT
A); ATP binding / hydrogen ion transporting ATP
synthase, rotational mechanism / hydrolase, acting on
acid anhydrides, catalyzing transmembrane movement of
substances / proton-transporting ATPase, rotational
mechanism | chr1:29660463-29664575 FORWARD
Length = 623
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 144/305 (47%), Gaps = 26/305 (8%)
Query: 151 TGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGN 210
TG +V+D L P GG + G G GKTV+ L ++ V+ G GER E
Sbjct: 231 TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDAVVYVGCGERGNEMA 287
Query: 211 DLYMEMKESGVINQENIAES---KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQD 267
++ M+ + + + ES + LV N P AR T +T+AEYFRD+ +
Sbjct: 288 EVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMG-YN 346
Query: 268 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTK-------EGS 320
V + D+ R+ +A E+S L MP+ GY L+ + S ER K GS
Sbjct: 347 VSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERNGS 406
Query: 321 ITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIV 380
+T + AV P D +DP + T + + L + LA + +P+V+ L S S
Sbjct: 407 VTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY---STA 463
Query: 381 GEEHYETAQ--------RVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKI-ERFL 431
E YE + ++ LQR +L +I+ ++G D L+E D++T+ A+ + E +L
Sbjct: 464 LESFYEKFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYL 523
Query: 432 SQPFF 436
+Q F
Sbjct: 524 AQNAF 528
>AT1G78900.1 | Symbols: VHA-A | VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT
A); ATP binding / hydrogen ion transporting ATP
synthase, rotational mechanism / hydrolase, acting on
acid anhydrides, catalyzing transmembrane movement of
substances / proton-transporting ATPase, rotational
mechanism | chr1:29660463-29664575 FORWARD
Length = 623
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 144/305 (47%), Gaps = 26/305 (8%)
Query: 151 TGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGN 210
TG +V+D L P GG + G G GKTV+ L ++ V+ G GER E
Sbjct: 231 TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDAVVYVGCGERGNEMA 287
Query: 211 DLYMEMKESGVINQENIAES---KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQD 267
++ M+ + + + ES + LV N P AR T +T+AEYFRD+ +
Sbjct: 288 EVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMG-YN 346
Query: 268 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTK-------EGS 320
V + D+ R+ +A E+S L MP+ GY L+ + S ER K GS
Sbjct: 347 VSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERNGS 406
Query: 321 ITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIV 380
+T + AV P D +DP + T + + L + LA + +P+V+ L S S
Sbjct: 407 VTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY---STA 463
Query: 381 GEEHYETAQ--------RVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKI-ERFL 431
E YE + ++ LQR +L +I+ ++G D L+E D++T+ A+ + E +L
Sbjct: 464 LESFYEKFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYL 523
Query: 432 SQPFF 436
+Q F
Sbjct: 524 AQNAF 528
>AT1G20260.1 | Symbols: | hydrogen ion transporting ATP synthase,
rotational mechanism / hydrolase, acting on acid
anhydrides, catalyzing transmembrane movement of
substances / proton-transporting ATPase, rotational
mechanism | chr1:7016971-7020290 FORWARD
Length = 487
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 160/358 (44%), Gaps = 29/358 (8%)
Query: 94 TGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGI 153
TG L PV LGRIFN G+P+D+ P+ A I S+ + + +TGI
Sbjct: 87 TGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGI 146
Query: 154 KVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI-------------NNIAKAHGGVS--- 197
+D++ RG KI LF AG+ + ++ N I + HG +
Sbjct: 147 STIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTENLIQEDHGEDNFAI 206
Query: 198 VFGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257
VF +G + +E+G + +V L N+P R+ ALT A
Sbjct: 207 VFAAMGVNMETAQFFKRDFEENGSM-------ERVTLFLNLANDPTIERIITPRIALTTA 259
Query: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315
EY + VL+ + ++ + A EVSA +P GY + T++ ++ ER
Sbjct: 260 EYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIE 319
Query: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375
++GSIT I + +P DD+T P P T + + R L + IYP ++ L S S ++
Sbjct: 320 GRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLM 379
Query: 376 QPQI----VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIER 429
+ I ++H + + ++ K++Q + A++G + LS ED L + K ER
Sbjct: 380 KSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFER 437
>AT1G76030.1 | Symbols: | vacuolar ATP synthase subunit B /
V-ATPase B subunit / vacuolar proton pump B subunit /
V-ATPase 57 kDa subunit | chr1:28534134-28536916 FORWARD
Length = 486
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 160/357 (44%), Gaps = 28/357 (7%)
Query: 94 TGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGI 153
TG L PV LGRIFN G+P+D+ P+ A I S+ + + +TGI
Sbjct: 87 TGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGI 146
Query: 154 KVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN------------NIAKAHGGVS---V 198
+D++ RG KI LF AG+ + ++ ++ + HG + V
Sbjct: 147 STIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTVDLLEDHGEDNFAIV 206
Query: 199 FGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAE 258
F +G + +E+G + +V L N+P R+ ALT AE
Sbjct: 207 FAAMGVNMETAQFFKRDFEENGSM-------ERVTLFLNLANDPTIERIITPRIALTTAE 259
Query: 259 YFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TST 316
Y + VL+ + ++ + A EVSA +P GY + T++ ++ ER
Sbjct: 260 YLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG 319
Query: 317 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 376
++GSIT I + +P DD+T P P T + + R L + IYP ++ L S S +++
Sbjct: 320 RKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMK 379
Query: 377 PQI----VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIER 429
I ++H + + ++ K++Q + A++G + LS ED L + K ER
Sbjct: 380 SAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFER 436
>AT4G38510.4 | Symbols: | vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative |
chr4:18011155-18014789 REVERSE
Length = 487
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 164/363 (45%), Gaps = 31/363 (8%)
Query: 94 TGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGI 153
TG L PV LGRIFN G+P+D+ P+ A I S+ + + +TGI
Sbjct: 88 TGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGI 147
Query: 154 KVVDLLAPYRRGGKIGLFGGAGVGKTVLIME------LINNIAKAHGGVS---------V 198
+D++ RG KI LF AG+ + + L+ + K+ + V
Sbjct: 148 STIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEHQEDDNFAIV 207
Query: 199 FGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAE 258
F +G + +E+G + +V L N+P R+ ALT AE
Sbjct: 208 FAAMGVNMETAQFFKRDFEENGSM-------ERVTLFLNLANDPTIERIITPRIALTTAE 260
Query: 259 YFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TST 316
Y + VL+ + ++ + A EVSA +P GY + T++ ++ ER
Sbjct: 261 YLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG 320
Query: 317 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 376
++GSIT I + +P DD+T P P T + + R L + IYP ++ L S S +++
Sbjct: 321 RKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMK 380
Query: 377 PQIVGE-----EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIER-F 430
I GE +H + + ++ K++Q + A++G + LS ED L + K ER F
Sbjct: 381 SAI-GEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKF 439
Query: 431 LSQ 433
++Q
Sbjct: 440 VAQ 442
>AT4G38510.3 | Symbols: | vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative |
chr4:18011155-18014789 REVERSE
Length = 487
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 164/363 (45%), Gaps = 31/363 (8%)
Query: 94 TGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGI 153
TG L PV LGRIFN G+P+D+ P+ A I S+ + + +TGI
Sbjct: 88 TGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGI 147
Query: 154 KVVDLLAPYRRGGKIGLFGGAGVGKTVLIME------LINNIAKAHGGVS---------V 198
+D++ RG KI LF AG+ + + L+ + K+ + V
Sbjct: 148 STIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEHQEDDNFAIV 207
Query: 199 FGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAE 258
F +G + +E+G + +V L N+P R+ ALT AE
Sbjct: 208 FAAMGVNMETAQFFKRDFEENGSM-------ERVTLFLNLANDPTIERIITPRIALTTAE 260
Query: 259 YFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TST 316
Y + VL+ + ++ + A EVSA +P GY + T++ ++ ER
Sbjct: 261 YLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG 320
Query: 317 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 376
++GSIT I + +P DD+T P P T + + R L + IYP ++ L S S +++
Sbjct: 321 RKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMK 380
Query: 377 PQIVGE-----EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIER-F 430
I GE +H + + ++ K++Q + A++G + LS ED L + K ER F
Sbjct: 381 SAI-GEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKF 439
Query: 431 LSQ 433
++Q
Sbjct: 440 VAQ 442
>AT4G38510.2 | Symbols: | vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative |
chr4:18011155-18014789 REVERSE
Length = 487
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 164/363 (45%), Gaps = 31/363 (8%)
Query: 94 TGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGI 153
TG L PV LGRIFN G+P+D+ P+ A I S+ + + +TGI
Sbjct: 88 TGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGI 147
Query: 154 KVVDLLAPYRRGGKIGLFGGAGVGKTVLIME------LINNIAKAHGGVS---------V 198
+D++ RG KI LF AG+ + + L+ + K+ + V
Sbjct: 148 STIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEHQEDDNFAIV 207
Query: 199 FGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAE 258
F +G + +E+G + +V L N+P R+ ALT AE
Sbjct: 208 FAAMGVNMETAQFFKRDFEENGSM-------ERVTLFLNLANDPTIERIITPRIALTTAE 260
Query: 259 YFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TST 316
Y + VL+ + ++ + A EVSA +P GY + T++ ++ ER
Sbjct: 261 YLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG 320
Query: 317 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 376
++GSIT I + +P DD+T P P T + + R L + IYP ++ L S S +++
Sbjct: 321 RKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMK 380
Query: 377 PQIVGE-----EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIER-F 430
I GE +H + + ++ K++Q + A++G + LS ED L + K ER F
Sbjct: 381 SAI-GEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKF 439
Query: 431 LSQ 433
++Q
Sbjct: 440 VAQ 442
>AT4G38510.1 | Symbols: | vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative |
chr4:18011155-18014789 REVERSE
Length = 487
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 164/363 (45%), Gaps = 31/363 (8%)
Query: 94 TGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGI 153
TG L PV LGRIFN G+P+D+ P+ A I S+ + + +TGI
Sbjct: 88 TGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGI 147
Query: 154 KVVDLLAPYRRGGKIGLFGGAGVGKTVLIME------LINNIAKAHGGVS---------V 198
+D++ RG KI LF AG+ + + L+ + K+ + V
Sbjct: 148 STIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEHQEDDNFAIV 207
Query: 199 FGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAE 258
F +G + +E+G + +V L N+P R+ ALT AE
Sbjct: 208 FAAMGVNMETAQFFKRDFEENGSM-------ERVTLFLNLANDPTIERIITPRIALTTAE 260
Query: 259 YFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TST 316
Y + VL+ + ++ + A EVSA +P GY + T++ ++ ER
Sbjct: 261 YLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG 320
Query: 317 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 376
++GSIT I + +P DD+T P P T + + R L + IYP ++ L S S +++
Sbjct: 321 RKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMK 380
Query: 377 PQIVGE-----EHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIER-F 430
I GE +H + + ++ K++Q + A++G + LS ED L + K ER F
Sbjct: 381 SAI-GEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKF 439
Query: 431 LSQ 433
++Q
Sbjct: 440 VAQ 442
>ATCG00120.1 | Symbols: ATPA | Encodes the ATPase alpha subunit,
which is a subunit of ATP synthase and part of the CF1
portion which catalyzes the conversion of ADP to ATP
using the proton motive force. This complex is located
in the thylakoid membrane of the chloroplast. |
chrC:9938-11461 REVERSE
Length = 507
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 182/438 (41%), Gaps = 31/438 (7%)
Query: 69 LGNNRVRAVAMSATDGL--TRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDT 126
L +N V V M DGL G V TG +PV A LGR+ N L P+D G +
Sbjct: 67 LESNNVGVVLMG--DGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISA 124
Query: 127 RATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 186
+ I AP I + +TG+ +D + P RG + + G GKT + + I
Sbjct: 125 SESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184
Query: 187 NNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMNEPPGAR 246
N + + V+ +G++ + ++E G + + +V + + P
Sbjct: 185 LN-QQGQNVICVYVAIGQKASSVAQVVTSLQERGAM--------EYTIVVAETADSPATL 235
Query: 247 MRVG-LTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTE 305
+ T +AEYF EQ L+ D++ + QA ++S LL R P Y +
Sbjct: 236 QYLAPYTGAALAEYFM-YREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYL 294
Query: 306 MGSLQERITSTK----EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGI 361
L ER EGS+T++ V + D++ P + D LS L GI
Sbjct: 295 HSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGI 354
Query: 362 YPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTV 421
PA++ S S + + + + A ++K L ++ EL+ +L + + +
Sbjct: 355 RPAINVGISVSRVGSAAQI-KAMKQVAGKLKLELAQFAELEAFSQF--SSDLDKATQNQL 411
Query: 422 ARARKIERFLSQ----PFFVAE----VFTGSPGKYVGLA-ETIRGFKLILSGELDSLPEQ 472
AR +++ L Q P V E ++TG+ G GL +R F + L L + Q
Sbjct: 412 ARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDGLEIGQVRKFLVQLRTYLKTNKPQ 471
Query: 473 AFYLVGNIDEATAKATNL 490
++ + TA+A +
Sbjct: 472 FQEIIASTKTLTAEAESF 489
>ATMG01190.1 | Symbols: ATP1 | ATPase subunit 1 | chrM:302166-303689
REVERSE
Length = 507
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 139/340 (40%), Gaps = 27/340 (7%)
Query: 69 LGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRA 128
L N V V + G V TG+ + VP G A LGR+ + +G P+D G +
Sbjct: 68 LENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHE 127
Query: 129 TSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN 188
+ AP ++ + +TG+K VD L P RG + L GG GKT + ++ I N
Sbjct: 128 QRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGGRQTGKTTIAIDTILN 187
Query: 189 --------IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMN 240
+++ V+ +G++ L ++E+ N E + LV +
Sbjct: 188 QKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEA------NALEYSI-LVAATAS 240
Query: 241 EPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQP 300
+P + + M EYFRD N L+ D++ + A ++S LL R P +
Sbjct: 241 DPAPLQFLAPYSGCAMGEYFRD-NGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299
Query: 301 TLSTEMGSLQERITS----TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 356
+ L ER T GS+T++ + A D++ P + D L L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359
Query: 357 AAKGIYPAVDPLDSTSTM-------LQPQIVGEEHYETAQ 389
+GI PA++ S S + Q+ G E AQ
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 399
>AT2G07698.1 | Symbols: | ATP synthase alpha chain, mitochondrial,
putative | chr2:3361474-3364028 FORWARD
Length = 777
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 138/340 (40%), Gaps = 27/340 (7%)
Query: 69 LGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRA 128
L N V V + G V TG+ + VP G A LGR+ + +G P+D G +
Sbjct: 338 LENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHE 397
Query: 129 TSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN 188
+ AP ++ + +TG+K VD L P RG + L G GKT + ++ I N
Sbjct: 398 QRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAIDTILN 457
Query: 189 --------IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMN 240
+++ V+ +G++ L ++E+ N E + LV +
Sbjct: 458 QKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEA------NALEYSI-LVAATAS 510
Query: 241 EPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQP 300
+P + + M EYFRD N L+ D++ + A ++S LL R P +
Sbjct: 511 DPAPLQFLAPYSGCAMGEYFRD-NGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 569
Query: 301 TLSTEMGSLQERITS----TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 356
+ L ER T GS+T++ + A D++ P + D L L
Sbjct: 570 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 629
Query: 357 AAKGIYPAVDPLDSTSTM-------LQPQIVGEEHYETAQ 389
+GI PA++ S S + Q+ G E AQ
Sbjct: 630 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 669