Jatropha Genome Database

JMS23C14r.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JMS23C14r.10 - phase: 0 /partial
         (167 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G19710.2 | Symbols: AK-HSDH II, AK-HSDH | bifunctional aspart...   196   4e-51
AT4G19710.1 | Symbols: AK-HSDH II, AK-HSDH | bifunctional aspart...   196   5e-51
AT1G31230.1 | Symbols: AK-HSDH I, AK-HSDH | AK-HSDH I (ASPARTATE...   185   1e-47

>AT4G19710.2 | Symbols: AK-HSDH II, AK-HSDH | bifunctional aspartate
           kinase/homoserine dehydrogenase, putative / AK-HSDH,
           putative | chr4:10725229-10729536 FORWARD
          Length = 916

 Score =  196 bits (499), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 92/117 (78%), Positives = 108/117 (92%)

Query: 27  EKVCIPRGDAWSVHKFGGTCVGTSERIKNVAEIIVNDGSEGKLVVVSAMSKVTDMMYDLI 86
           ++V IP+G+ WSVHKFGGTCVG S+RI+NVAE+I+ND SE KLVVVSAMSKVTDMMYDLI
Sbjct: 79  DQVQIPKGEMWSVHKFGGTCVGNSQRIRNVAEVIINDNSERKLVVVSAMSKVTDMMYDLI 138

Query: 87  YKAQSRDDSYIAAVDAVFEKHRLTAMDLLDGEDLASFLSRLHHDVNNLKAMLRAIYI 143
            KAQSRDDSY++A++AV EKHRLTA DLLDG+DLASFLS LH+D++NLKAMLRAIYI
Sbjct: 139 RKAQSRDDSYLSALEAVLEKHRLTARDLLDGDDLASFLSHLHNDISNLKAMLRAIYI 195


>AT4G19710.1 | Symbols: AK-HSDH II, AK-HSDH | bifunctional aspartate
           kinase/homoserine dehydrogenase, putative / AK-HSDH,
           putative | chr4:10725229-10729278 FORWARD
          Length = 859

 Score =  196 bits (499), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 92/118 (77%), Positives = 108/118 (91%)

Query: 27  EKVCIPRGDAWSVHKFGGTCVGTSERIKNVAEIIVNDGSEGKLVVVSAMSKVTDMMYDLI 86
           ++V IP+G+ WSVHKFGGTCVG S+RI+NVAE+I+ND SE KLVVVSAMSKVTDMMYDLI
Sbjct: 79  DQVQIPKGEMWSVHKFGGTCVGNSQRIRNVAEVIINDNSERKLVVVSAMSKVTDMMYDLI 138

Query: 87  YKAQSRDDSYIAAVDAVFEKHRLTAMDLLDGEDLASFLSRLHHDVNNLKAMLRAIYIG 144
            KAQSRDDSY++A++AV EKHRLTA DLLDG+DLASFLS LH+D++NLKAMLRAIYI 
Sbjct: 139 RKAQSRDDSYLSALEAVLEKHRLTARDLLDGDDLASFLSHLHNDISNLKAMLRAIYIA 196


>AT1G31230.1 | Symbols: AK-HSDH I, AK-HSDH | AK-HSDH I (ASPARTATE
           KINASE-HOMOSERINE DEHYDROGENASE I); aspartate kinase/
           homoserine dehydrogenase | chr1:11158744-11163055
           REVERSE
          Length = 911

 Score =  185 bits (470), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 90/135 (66%), Positives = 112/135 (82%), Gaps = 4/135 (2%)

Query: 14  SPLLLA----VLLDESKEKVCIPRGDAWSVHKFGGTCVGTSERIKNVAEIIVNDGSEGKL 69
           SP +L     + LD S E   +P+GD+W+VHKFGGTCVG SERIK+VA ++V D SE KL
Sbjct: 57  SPRVLGSVTDLALDNSVENGHLPKGDSWAVHKFGGTCVGNSERIKDVAAVVVKDDSERKL 116

Query: 70  VVVSAMSKVTDMMYDLIYKAQSRDDSYIAAVDAVFEKHRLTAMDLLDGEDLASFLSRLHH 129
           VVVSAMSKVTDMMYDLI++A+SRDDSY++A+  V EKHR TA+DLLDG++L+SFL+RL+ 
Sbjct: 117 VVVSAMSKVTDMMYDLIHRAESRDDSYLSALSGVLEKHRATAVDLLDGDELSSFLARLND 176

Query: 130 DVNNLKAMLRAIYIG 144
           D+NNLKAMLRAIYI 
Sbjct: 177 DINNLKAMLRAIYIA 191