Jatropha Genome Database

JcSR479173f.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcSR479173f.10 + phase: 0 /partial
         (64 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g039000.1 Importin alpha-like protein, beta-binding r...   107   1e-24
IMGA|Medtr7g138170.1 Armadillo chr07_pseudomolecule_IMGAG_V3 327...   102   6e-23
IMGA|Medtr1g100320.1 Importin alpha-like protein, beta-binding r...   100   2e-22
IMGA|Medtr8g146050.1 Armadillo chr08_pseudomolecule_IMGAG_V3 356...    89   4e-19
IMGA|Medtr8g138280.1 Myb, DNA-binding; Importin alpha-like prote...    88   1e-18
IMGA|Medtr8g145550.1 Armadillo chr08_pseudomolecule_IMGAG_V3 354...    80   2e-16
IMGA|Medtr8g147700.1 Armadillo chr08_pseudomolecule_IMGAG_V3 364...    79   4e-16
IMGA|Medtr8g147650.1 Armadillo chr08_pseudomolecule_IMGAG_V3 364...    74   1e-14
IMGA|Medtr8g147720.1 Armadillo chr08_pseudomolecule_IMGAG_V3 364...    74   2e-14
IMGA|Medtr7g139160.1 Armadillo chr07_pseudomolecule_IMGAG_V3 332...    62   5e-11
IMGA|Medtr8g129530.1 Armadillo-like helical chr08_pseudomolecule...    56   5e-09

>IMGA|Medtr2g039000.1 Importin alpha-like protein, beta-binding
           region chr02_pseudomolecule_IMGAG_V3 11033049-11037195 E
           EGN_Mt090430 20090702
          Length = 566

 Score =  107 bits (267), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 55/62 (88%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LESLP MVAGVWS++ N QLEATT FRKLLSIERSPPI EV+Q+GVVPRF++FL R DFP
Sbjct: 72  LESLPAMVAGVWSDDNNQQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLVREDFP 131

Query: 61  QL 62
           QL
Sbjct: 132 QL 133


>IMGA|Medtr7g138170.1 Armadillo chr07_pseudomolecule_IMGAG_V3
           32721508-32726545 E EGN_Mt090430 20090702
          Length = 563

 Score =  102 bits (253), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 52/62 (83%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LE LP +V G+W+++ N Q EATT FRKLLSIERSPPI EV+QAGVVPRFIEFL R DFP
Sbjct: 73  LEHLPALVTGIWTDDNNMQFEATTQFRKLLSIERSPPIEEVIQAGVVPRFIEFLMREDFP 132

Query: 61  QL 62
           QL
Sbjct: 133 QL 134


>IMGA|Medtr1g100320.1 Importin alpha-like protein, beta-binding
           region chr01_pseudomolecule_IMGAG_V3 20775091-20769902 E
           EGN_Mt090430 20090702
          Length = 533

 Score =  100 bits (249), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 52/62 (83%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LE LP MVAGVWS++ N QLE+TT FRKLLSIER+PPI EV+Q GVV RF+EFL R DFP
Sbjct: 73  LEHLPTMVAGVWSDDNNLQLESTTQFRKLLSIERTPPIEEVIQTGVVSRFVEFLMREDFP 132

Query: 61  QL 62
           QL
Sbjct: 133 QL 134


>IMGA|Medtr8g146050.1 Armadillo chr08_pseudomolecule_IMGAG_V3
          35638149-35634973 E EGN_Mt090430 20090702
          Length = 493

 Score = 89.4 bits (220), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 39/56 (69%), Positives = 48/56 (85%)

Query: 7  MVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFPQL 62
          MVA +WS++ + QLEATT FRK LSIER PPI+EV+Q+GVVPRF++FL R DFPQL
Sbjct: 1  MVANIWSDDNSQQLEATTEFRKRLSIERYPPIDEVIQSGVVPRFVQFLYREDFPQL 56


>IMGA|Medtr8g138280.1 Myb, DNA-binding; Importin alpha-like protein,
           beta-binding region chr08_pseudomolecule_IMGAG_V3
           33283183-33288014 E EGN_Mt090430 20090702
          Length = 602

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 51/62 (82%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
            ESLP +VAGV S   ++QLEATT FRKLLS++R+PPI EV+Q+GVVPRF+EFLAR D P
Sbjct: 75  FESLPALVAGVLSNYGSAQLEATTLFRKLLSVDRTPPIEEVIQSGVVPRFVEFLAREDSP 134

Query: 61  QL 62
            L
Sbjct: 135 LL 136


>IMGA|Medtr8g145550.1 Armadillo chr08_pseudomolecule_IMGAG_V3
          35401734-35403235 E EGN_Mt090430 20090702
          Length = 246

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 48/56 (85%), Gaps = 1/56 (1%)

Query: 7  MVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFPQL 62
          MVA +WS++ + QLEATT FRK LS+++ PPI++V+Q+GVVPRF++FL + DFPQL
Sbjct: 1  MVADIWSDDNSQQLEATTEFRKRLSVDK-PPIDDVIQSGVVPRFVQFLDKGDFPQL 55


>IMGA|Medtr8g147700.1 Armadillo chr08_pseudomolecule_IMGAG_V3
          36429604-36426668 E EGN_Mt090430 20090702
          Length = 514

 Score = 79.3 bits (194), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 44/52 (84%)

Query: 11 VWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFPQL 62
          VWS++ + QLEATTHFRKL+S   +P I+ V+Q+GVVPRF+EFL R+DFPQL
Sbjct: 2  VWSDDNSQQLEATTHFRKLISTIHNPQIDHVIQSGVVPRFVEFLFRDDFPQL 53


>IMGA|Medtr8g147650.1 Armadillo chr08_pseudomolecule_IMGAG_V3
          36403451-36406010 E EGN_Mt090430 20090702
          Length = 257

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 44/56 (78%)

Query: 7  MVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFPQL 62
          MVA VWS++ N QLEATT FR LL     PPI++V+Q+GVV RF++FL R++FP+L
Sbjct: 1  MVATVWSDDNNQQLEATTQFRMLLCNYPGPPIDQVIQSGVVSRFVQFLLRDNFPRL 56


>IMGA|Medtr8g147720.1 Armadillo chr08_pseudomolecule_IMGAG_V3
          36435891-36432952 E EGN_Mt090430 20090702
          Length = 492

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 1  LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
          LESLP +VA VWS++ + QLE  T FRKLL +  +PPI +++Q+ VV RF+EF+ R+DFP
Sbjct: 6  LESLPAIVAMVWSDDNSKQLEGATKFRKLL-LTHNPPIEKIIQSFVVTRFLEFIPRDDFP 64

Query: 61 QL 62
          +L
Sbjct: 65 KL 66


>IMGA|Medtr7g139160.1 Armadillo chr07_pseudomolecule_IMGAG_V3
           33218418-33222903 H EGN_Mt090430 20090702
          Length = 522

 Score = 62.4 bits (150), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/61 (50%), Positives = 43/61 (70%)

Query: 2   ESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFPQ 61
           +++P M  G+ S++  +QLEATT F KLLS      I++V QA VVPRF++FL R+D PQ
Sbjct: 90  QTIPAMKQGLLSDDPAAQLEATTQFGKLLSGGHIYLIDKVKQADVVPRFVQFLTRDDMPQ 149

Query: 62  L 62
           L
Sbjct: 150 L 150


>IMGA|Medtr8g129530.1 Armadillo-like helical
          chr08_pseudomolecule_IMGAG_V3 30642074-30642527 E
          EGN_Mt090430 20090702
          Length = 80

 Score = 55.8 bits (133), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 7/52 (13%)

Query: 11 VWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFPQL 62
          VWS++   QLEAT   R+LLS        +V+Q+ VVPRF+EFL R+D PQL
Sbjct: 2  VWSDDNIQQLEATKQIRRLLS-------TQVIQSAVVPRFVEFLFRDDLPQL 46