Jatropha Genome Database

JcPR13H21R2.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR13H21R2.10 + phase: 2 /pseudo/partial
         (108 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g103080.1 Phosphoribosyltransferase chr08_pseudomolec...    95   1e-20

>IMGA|Medtr8g103080.1 Phosphoribosyltransferase
           chr08_pseudomolecule_IMGAG_V3 22890648-22894795 E
           EGN_Mt090430 20090702
          Length = 396

 Score = 94.7 bits (234), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/48 (89%), Positives = 46/48 (95%)

Query: 50  TQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           TQGRESIAAKLVANLIT+AG +RVLACDLHSGQSMGYFDIPVDHV+ Q
Sbjct: 183 TQGRESIAAKLVANLITKAGADRVLACDLHSGQSMGYFDIPVDHVHCQ 230