Jatropha Genome Database

JcPR04G356P.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR04G356P.10 + phase: 0 /pseudo/partial
         (104 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g107170.4 Zinc/iron permease chr03_pseudomolecule_IMG...    86   4e-18
IMGA|Medtr3g107170.5 Zinc/iron permease chr03_pseudomolecule_IMG...    86   5e-18
IMGA|Medtr3g107170.1 Zinc/iron permease chr03_pseudomolecule_IMG...    86   6e-18
IMGA|Medtr3g107170.3 Zinc/iron permease chr03_pseudomolecule_IMG...    86   6e-18
IMGA|Medtr3g107170.2 Zinc/iron permease chr03_pseudomolecule_IMG...    86   6e-18
IMGA|Medtr4g157380.1 Zinc/iron permease chr04_pseudomolecule_IMG...    85   1e-17
IMGA|Medtr3g139990.1 Cytochrome c oxidase, subunit I; Zinc/iron ...    75   6e-15
IMGA|Medtr4g114830.1 Zinc/iron permease chr04_pseudomolecule_IMG...    75   9e-15
IMGA|Medtr1g020230.1 Zinc/iron permease chr01_pseudomolecule_IMG...    68   1e-12
IMGA|AC233671_14.1 Zinc/iron permease AC233671.1 52544-53950 E E...    64   2e-11
IMGA|Medtr5g080290.1 Zinc/iron permease chr05_pseudomolecule_IMG...    62   9e-11

>IMGA|Medtr3g107170.4 Zinc/iron permease
           chr03_pseudomolecule_IMGAG_V3 27183715-27178827 E
           EGN_Mt090430 20090702
          Length = 214

 Score = 85.9 bits (211), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 55/72 (76%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           + QA FKS ++  M +FF+LTTP GI IG+GIS VY+E+SPTALI EG+ N+AS+G    
Sbjct: 111 ITQANFKSLSITIMGLFFALTTPVGIGIGLGISNVYDENSPTALIFEGIFNAASAGILIY 170

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 171 MALVDLLAADFM 182


>IMGA|Medtr3g107170.5 Zinc/iron permease
          chr03_pseudomolecule_IMGAG_V3 27185792-27178827 E
          EGN_Mt090430 20090702
          Length = 110

 Score = 85.9 bits (211), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 55/73 (75%)

Query: 12 VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
          + QA FKS ++  M +FF+LTTP GI IG+GIS VY+E+SPTALI EG+ N+AS+G    
Sbjct: 7  ITQANFKSLSITIMGLFFALTTPVGIGIGLGISNVYDENSPTALIFEGIFNAASAGILIY 66

Query: 72 WLLVDLLASDFLE 84
            LVDLLA+DF+ 
Sbjct: 67 MALVDLLAADFMN 79


>IMGA|Medtr3g107170.1 Zinc/iron permease
           chr03_pseudomolecule_IMGAG_V3 27185792-27178827 E
           EGN_Mt090430 20090702
          Length = 433

 Score = 85.5 bits (210), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 55/72 (76%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           + QA FKS ++  M +FF+LTTP GI IG+GIS VY+E+SPTALI EG+ N+AS+G    
Sbjct: 330 ITQANFKSLSITIMGLFFALTTPVGIGIGLGISNVYDENSPTALIFEGIFNAASAGILIY 389

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 390 MALVDLLAADFM 401


>IMGA|Medtr3g107170.3 Zinc/iron permease
           chr03_pseudomolecule_IMGAG_V3 27185792-27178827 E
           EGN_Mt090430 20090702
          Length = 372

 Score = 85.5 bits (210), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 55/72 (76%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           + QA FKS ++  M +FF+LTTP GI IG+GIS VY+E+SPTALI EG+ N+AS+G    
Sbjct: 269 ITQANFKSLSITIMGLFFALTTPVGIGIGLGISNVYDENSPTALIFEGIFNAASAGILIY 328

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 329 MALVDLLAADFM 340


>IMGA|Medtr3g107170.2 Zinc/iron permease
           chr03_pseudomolecule_IMGAG_V3 27185792-27178827 E
           EGN_Mt090430 20090702
          Length = 377

 Score = 85.5 bits (210), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 55/72 (76%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           + QA FKS ++  M +FF+LTTP GI IG+GIS VY+E+SPTALI EG+ N+AS+G    
Sbjct: 274 ITQANFKSLSITIMGLFFALTTPVGIGIGLGISNVYDENSPTALIFEGIFNAASAGILIY 333

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 334 MALVDLLAADFM 345


>IMGA|Medtr4g157380.1 Zinc/iron permease
           chr04_pseudomolecule_IMGAG_V3 39200692-39203007 H
           EGN_Mt090430 20090702
          Length = 442

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 57/72 (79%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QA + +K  +TM+ FFS TTP GIA+GIG+SKVY+ +SPTALIVEG+LN+ S+G    
Sbjct: 250 ILQADYGTKMKSTMIFFFSATTPFGIALGIGLSKVYSNTSPTALIVEGVLNAMSAGLLNY 309

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 310 MALVDLLANDFM 321


>IMGA|Medtr3g139990.1 Cytochrome c oxidase, subunit I; Zinc/iron
           permease chr03_pseudomolecule_IMGAG_V3 36159472-36162716
           E EGN_Mt090430 20090702
          Length = 403

 Score = 75.5 bits (184), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 51/76 (67%)

Query: 8   LVDMVMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSG 67
           L   + QA+FK+ +   M  FF+LTTP G+ IG GI+ VYN  SP ALI EG+L++ S+G
Sbjct: 296 LGGCISQAQFKASSTTIMACFFALTTPIGVGIGTGIASVYNPYSPGALIAEGILDALSAG 355

Query: 68  S*FIWLLVDLLASDFL 83
                 LVDL+A+DFL
Sbjct: 356 ILVYMALVDLIAADFL 371


>IMGA|Medtr4g114830.1 Zinc/iron permease
           chr04_pseudomolecule_IMGAG_V3 26389944-26391756 F
           EGN_Mt090430 20090702
          Length = 350

 Score = 74.7 bits (182), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 52/72 (72%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QAK+K    A +V FFS+TTP GIAIG+ +S  Y E+SP ALI  GLLN++S+G    
Sbjct: 247 ILQAKYKFLKNAMLVFFFSITTPLGIAIGLAMSTSYKENSPVALITVGLLNASSAGLLIY 306

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 307 MALVDLLAADFM 318


>IMGA|Medtr1g020230.1 Zinc/iron permease
           chr01_pseudomolecule_IMGAG_V3 4382856-4388659 E
           EGN_Mt090430 20090702
          Length = 374

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 48/70 (68%)

Query: 14  QAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FIWL 73
           +A+FK+ +   M  FF+LTTP G+AIG  ++  +N  SP ALI EG+L+S S+G      
Sbjct: 273 EARFKTSSATIMACFFALTTPLGVAIGTLVASNFNPYSPGALITEGILDSLSAGILVYMA 332

Query: 74  LVDLLASDFL 83
           LVDL+A+DFL
Sbjct: 333 LVDLIAADFL 342


>IMGA|AC233671_14.1 Zinc/iron permease AC233671.1 52544-53950 E
          EGN_Mt090430 20090702
          Length = 116

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 3/81 (3%)

Query: 6  NHLVDMVMQ---AKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLN 62
          NHL  + ++   A+FK   V  M++FF L  P GI IG+GIS +YNESSP +LIVEG L 
Sbjct: 2  NHLESLRLEFYMAQFKYYKVTIMILFFCLIFPIGIGIGMGISNIYNESSPKSLIVEGFLL 61

Query: 63 SASSGS*FIWLLVDLLASDFL 83
          SAS+G      LVDL+A+DF+
Sbjct: 62 SASAGVLINMALVDLVATDFM 82


>IMGA|Medtr5g080290.1 Zinc/iron permease
           chr05_pseudomolecule_IMGAG_V3 30025860-30023432 E
           EGN_Mt090430 20090702
          Length = 318

 Score = 61.6 bits (148), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 2/75 (2%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKV--YNESSPTALIVEGLLNSASSGS* 69
           V QA F    VA M   FS+TTP GI +G+ +  +  Y++S+P ALI+EGLL S SSG  
Sbjct: 212 VAQAGFSYGTVAYMCFMFSVTTPMGIILGMILFSLTGYDDSNPNALIIEGLLGSISSGIL 271

Query: 70  FIWLLVDLLASDFLE 84
               LVDL+A+DF  
Sbjct: 272 IYMALVDLIAADFFH 286