Jatropha Genome Database
- JcPR03ASM3X.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcPR03ASM3X.10 + phase: 1 /partial
(95 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g118290.1 Haloacid dehalogenase-like hydrolase chr04_... 118 7e-28
IMGA|Medtr4g118140.1 Haloacid dehalogenase-like hydrolase chr04_... 115 5e-27
IMGA|Medtr8g101510.1 Cation transporting ATPase, C-terminal chr0... 99 7e-22
IMGA|Medtr5g015700.1 Cation transporting ATPase, C-terminal chr0... 97 2e-21
IMGA|Medtr7g135130.1 Cation transporting ATPase, C-terminal chr0... 97 2e-21
IMGA|Medtr2g043050.1 ATPase, E1-E2 type chr02_pseudomolecule_IMG... 56 4e-09
IMGA|Medtr8g015280.1 ATPase, E1-E2 type chr08_pseudomolecule_IMG... 49 6e-07
>IMGA|Medtr4g118290.1 Haloacid dehalogenase-like hydrolase
chr04_pseudomolecule_IMGAG_V3 27450089-27455125 H
EGN_Mt090430 20090702
Length = 904
Score = 118 bits (295), Expect = 7e-28, Method: Composition-based stats.
Identities = 58/92 (63%), Positives = 68/92 (73%)
Query: 1 LNGVATIIGKIGLAFAIMTFLVLMGRFLMTKARNNEIMKWSASDALTVLNFFXXXXXXXX 60
LNGVAT+IGKIGL FA++TFLVL GRFL+ K +N I KW +DA +LNFF
Sbjct: 298 LNGVATLIGKIGLGFALVTFLVLTGRFLVVKISHNSITKWDLNDASMLLNFFATAVIIIV 357
Query: 61 XXXPEGLPLAVTLSLAFAMKQLMKDRALVRSI 92
PEGLPLAVTLSLAFAMK+LM D+ALVR +
Sbjct: 358 VAVPEGLPLAVTLSLAFAMKKLMNDKALVRHL 389
>IMGA|Medtr4g118140.1 Haloacid dehalogenase-like hydrolase
chr04_pseudomolecule_IMGAG_V3 27340344-27345386 H
EGN_Mt090430 20090702
Length = 870
Score = 115 bits (288), Expect = 5e-27, Method: Composition-based stats.
Identities = 57/92 (61%), Positives = 67/92 (72%)
Query: 1 LNGVATIIGKIGLAFAIMTFLVLMGRFLMTKARNNEIMKWSASDALTVLNFFXXXXXXXX 60
LNGVAT+IGKIGL FA++TFLVL RFL+ K +N I KW +DA +LNFF
Sbjct: 298 LNGVATLIGKIGLGFALVTFLVLTFRFLVVKISHNSITKWDLNDASMLLNFFATAVIIIV 357
Query: 61 XXXPEGLPLAVTLSLAFAMKQLMKDRALVRSI 92
PEGLPLAVTLSLAFAMK+LM D+ALVR +
Sbjct: 358 VAVPEGLPLAVTLSLAFAMKKLMNDKALVRHL 389
>IMGA|Medtr8g101510.1 Cation transporting ATPase, C-terminal
chr08_pseudomolecule_IMGAG_V3 22037135-22032188 E
EGN_Mt090430 20090702
Length = 1017
Score = 98.6 bits (244), Expect = 7e-22, Method: Composition-based stats.
Identities = 49/92 (53%), Positives = 62/92 (67%)
Query: 1 LNGVATIIGKIGLAFAIMTFLVLMGRFLMTKARNNEIMKWSASDALTVLNFFXXXXXXXX 60
LNGVATIIGKIGL FA++TF VL+ L K R +W+ +A+ +L +F
Sbjct: 354 LNGVATIIGKIGLVFAVITFTVLVKGHLSHKIREGNFWRWTGDNAMEMLEYFAIAVTIVV 413
Query: 61 XXXPEGLPLAVTLSLAFAMKQLMKDRALVRSI 92
PEGLPLAVTLSLAFAMK++M D+ALVR +
Sbjct: 414 VAVPEGLPLAVTLSLAFAMKKMMNDKALVRHL 445
>IMGA|Medtr5g015700.1 Cation transporting ATPase, C-terminal
chr05_pseudomolecule_IMGAG_V3 5279455-5284084 E
EGN_Mt090430 20090702
Length = 959
Score = 97.1 bits (240), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/92 (54%), Positives = 62/92 (67%)
Query: 1 LNGVATIIGKIGLAFAIMTFLVLMGRFLMTKARNNEIMKWSASDALTVLNFFXXXXXXXX 60
LNGVATIIGKIGL FAI+TF VL+ + K + W+ DAL +L +F
Sbjct: 294 LNGVATIIGKIGLFFAIVTFAVLVQGLVSLKLQQENFWNWNGDDALEMLEYFAIAVTIVV 353
Query: 61 XXXPEGLPLAVTLSLAFAMKQLMKDRALVRSI 92
PEGLPLAVTLSLAFAMK++M D+ALVR++
Sbjct: 354 VAVPEGLPLAVTLSLAFAMKKMMNDKALVRNL 385
>IMGA|Medtr7g135130.1 Cation transporting ATPase, C-terminal
chr07_pseudomolecule_IMGAG_V3 32085774-32091028 E
EGN_Mt090430 20090702
Length = 1011
Score = 96.7 bits (239), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 62/92 (67%)
Query: 1 LNGVATIIGKIGLAFAIMTFLVLMGRFLMTKARNNEIMKWSASDALTVLNFFXXXXXXXX 60
LNGVATI+GKIGL+F+++T VL+ +F + KA + WS+ DA+ +LN+
Sbjct: 301 LNGVATIVGKIGLSFSLLTLAVLVIQFFVDKATRGDFTNWSSKDAMKLLNYINILVTMIV 360
Query: 61 XXXPEGLPLAVTLSLAFAMKQLMKDRALVRSI 92
PEGLPLAVTL+LAFA K L DRALVR +
Sbjct: 361 IAVPEGLPLAVTLNLAFATKSLTNDRALVRHL 392
>IMGA|Medtr2g043050.1 ATPase, E1-E2 type
chr02_pseudomolecule_IMGAG_V3 12236692-12249783 E
EGN_Mt090430 20090702
Length = 1093
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Query: 1 LNGVATIIGKIGLAFAIMTFLVLMGRFLMTKARNNEIMKW------SASDALT-VLNFFX 53
LNGVAT IG +GL+ A++ +VL+ R+ RN++ K A A+ +
Sbjct: 387 LNGVATFIGIVGLSVAVLVLIVLLARYFSGHTRNSDGTKQFIAGKTKAGHAIDGAIKIIT 446
Query: 54 XXXXXXXXXXPEGLPLAVTLSLAFAMKQLMKDRALVR 90
PEGLPLAVTL+LA++M+++M D+ALVR
Sbjct: 447 VAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVR 483
>IMGA|Medtr8g015280.1 ATPase, E1-E2 type
chr08_pseudomolecule_IMGAG_V3 2653378-2651996 H
EGN_Mt090430 20090702
Length = 446
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 1 LNGVATIIGKIGLAFAIMTFLVLMGRFLMTKARNNEIM------KWSASDALT-VLNFFX 53
LN + + IGK+GLA A + +VL+ R+ + + + K S D + V+
Sbjct: 327 LNKLTSSIGKVGLAVAFLVLVVLLIRYFTGNTKTDNGVREFNGRKTSFDDVMNAVIGIIA 386
Query: 54 XXXXXXXXXXPEGLPLAVTLSLAFAMKQLMKDRALVRSI 92
PEGLPLAVTL+LA++MK++M D+A+VR +
Sbjct: 387 DAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKL 425