Jatropha Genome Database

JcPR03AS3LV.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR03AS3LV.10 + phase: 1 /pseudo/partial
         (96 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g125510.1 Aldehyde dehydrogenase 2B7, mitochondrial p...    78   1e-15
IMGA|Medtr4g158670.2 Aldehyde dehydrogenase 2C4, cytosolic, puta...    62   7e-11
IMGA|Medtr4g158670.1 hypothetical protein chr04_pseudomolecule_I...    62   7e-11
IMGA|Medtr4g133170.1 Aldehyde dehydrogenase 2C4, cytosolic, puta...    60   3e-10
IMGA|Medtr4g158660.1 Aldehyde dehydrogenase 2C4, cytosolic, puta...    59   6e-10
IMGA|Medtr4g133180.1 Aldehyde dehydrogenase 2C4, cytosolic, puta...    59   6e-10
IMGA|Medtr6g101890.1 Aldehyde dehydrogenase 2C4, cytosolic, puta...    57   2e-09

>IMGA|Medtr8g125510.1 Aldehyde dehydrogenase 2B7, mitochondrial
           precursor, putative chr08_pseudomolecule_IMGAG_V3
           29287007-29290956 E EGN_Mt090430 20090702
          Length = 544

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/76 (53%), Positives = 47/76 (61%)

Query: 18  RDLGEVIHRANSTRYGLAAGVFTQNIDTANILTRALRVGTVWIN*L*CVRRCDSFWWI*D 77
           +D+ EVI RAN+TRYGLAAGVFT N+ TAN L RALR GTVWIN          F     
Sbjct: 454 KDINEVIRRANATRYGLAAGVFTNNVSTANTLMRALRAGTVWINCFDVFDAAIPFGGYKM 513

Query: 78  EWTWKREGYYSLANYL 93
               + +G YSL NYL
Sbjct: 514 SGIGREKGIYSLHNYL 529


>IMGA|Medtr4g158670.2 Aldehyde dehydrogenase 2C4, cytosolic,
           putative chr04_pseudomolecule_IMGAG_V3 39918232-39915029
           F EGN_Mt090430 20090702
          Length = 414

 Score = 62.0 bits (149), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 39/49 (79%), Gaps = 1/49 (2%)

Query: 13  VRKFCRDLGEVIHRANSTRYGLAAGVFTQNIDTANILTRALRVGTVWIN 61
           ++KF + + E I  AN+TRYGLAAG+ T+N+D AN ++R++R GT+WIN
Sbjct: 320 LKKF-KTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGTIWIN 367


>IMGA|Medtr4g158670.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 39922985-39915029 F
           EGN_Mt090430 20090702
          Length = 494

 Score = 62.0 bits (149), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 39/49 (79%), Gaps = 1/49 (2%)

Query: 13  VRKFCRDLGEVIHRANSTRYGLAAGVFTQNIDTANILTRALRVGTVWIN 61
           ++KF + + E I  AN+TRYGLAAG+ T+N+D AN ++R++R GT+WIN
Sbjct: 400 LKKF-KTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGTIWIN 447


>IMGA|Medtr4g133170.1 Aldehyde dehydrogenase 2C4, cytosolic,
           putative chr04_pseudomolecule_IMGAG_V3 31790759-31792298
           E EGN_Mt090430 20090702
          Length = 214

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 39/49 (79%), Gaps = 1/49 (2%)

Query: 13  VRKFCRDLGEVIHRANSTRYGLAAGVFTQNIDTANILTRALRVGTVWIN 61
           ++KF + + E I  AN+TRYGLAAG+ T+N+D AN ++R++R GT+WIN
Sbjct: 120 LKKF-KTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGTIWIN 167


>IMGA|Medtr4g158660.1 Aldehyde dehydrogenase 2C4, cytosolic,
           putative chr04_pseudomolecule_IMGAG_V3 39912373-39908517
           F EGN_Mt090430 20090702
          Length = 503

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/44 (52%), Positives = 34/44 (77%)

Query: 18  RDLGEVIHRANSTRYGLAAGVFTQNIDTANILTRALRVGTVWIN 61
           + + E I  AN+TRYGLAAG+ T+N+D AN ++R++R G +WIN
Sbjct: 413 KTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIWIN 456


>IMGA|Medtr4g133180.1 Aldehyde dehydrogenase 2C4, cytosolic,
           putative chr04_pseudomolecule_IMGAG_V3 31794963-31798826
           F EGN_Mt090430 20090702
          Length = 503

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/44 (52%), Positives = 34/44 (77%)

Query: 18  RDLGEVIHRANSTRYGLAAGVFTQNIDTANILTRALRVGTVWIN 61
           + + E I  AN+TRYGLAAG+ T+N+D AN ++R++R G +WIN
Sbjct: 413 KTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIWIN 456


>IMGA|Medtr6g101890.1 Aldehyde dehydrogenase 2C4, cytosolic,
           putative chr06_pseudomolecule_IMGAG_V3 22473430-22483454
           E EGN_Mt090430 20090702
          Length = 502

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/44 (50%), Positives = 34/44 (77%)

Query: 18  RDLGEVIHRANSTRYGLAAGVFTQNIDTANILTRALRVGTVWIN 61
           + + E I  AN+T+YGLAAG+ T+N+D AN ++R++R G +WIN
Sbjct: 412 KTIEEAIKSANNTKYGLAAGIVTKNLDIANTVSRSIRAGIIWIN 455