Jatropha Genome Database

JcPR03AHRQV.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR03AHRQV.10 - phase: 0 /partial
         (73 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g011210.1 ELK; KNOX1; KNOX2; Homeodomain-related chr0...    91   1e-19
IMGA|Medtr8g122670.1 ELK; KNOX1; KNOX2; Homeodomain-related chr0...    72   8e-14
IMGA|Medtr3g137900.2 ELK; KNOX1; KNOX2; Homeodomain-related chr0...    70   2e-13
IMGA|Medtr3g137900.1 ELK; KNOX1; KNOX2; Homeodomain-related chr0...    67   2e-12

>IMGA|Medtr5g011210.1 ELK; KNOX1; KNOX2; Homeodomain-related
          chr05_pseudomolecule_IMGAG_V3 3000765-2996172 E
          EGN_Mt090430 20090702
          Length = 305

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/47 (89%), Positives = 46/47 (97%)

Query: 27 QTRQLKADIATHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLSQSHH 73
          + RQLKA+IATHPLYEQLL+AHV+CLRVATPIDQLPLIDAQLSQSHH
Sbjct: 23 ENRQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPLIDAQLSQSHH 69


>IMGA|Medtr8g122670.1 ELK; KNOX1; KNOX2; Homeodomain-related
           chr08_pseudomolecule_IMGAG_V3 28787058-28781546 E
           EGN_Mt090430 20090702
          Length = 332

 Score = 71.6 bits (174), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 31/46 (67%), Positives = 40/46 (86%)

Query: 26  DQTRQLKADIATHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLSQS 71
           ++ R+ KA+I  HPLY+QLL+AHVSCLR+ATP+DQLP IDAQL Q+
Sbjct: 65  EELREYKAEILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQA 110


>IMGA|Medtr3g137900.2 ELK; KNOX1; KNOX2; Homeodomain-related
           chr03_pseudomolecule_IMGAG_V3 35070779-35066452 E
           EGN_Mt090430 20090702
          Length = 371

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 30/42 (71%), Positives = 37/42 (88%)

Query: 32  KADIATHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLSQSHH 73
           K +I  HPLYEQLL+AHVSCLR+ATP+DQLP IDAQL++S +
Sbjct: 107 KGEIMAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAESQN 148


>IMGA|Medtr3g137900.1 ELK; KNOX1; KNOX2; Homeodomain-related
           chr03_pseudomolecule_IMGAG_V3 35070779-35066452 E
           EGN_Mt090430 20090702
          Length = 373

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/47 (65%), Positives = 39/47 (82%)

Query: 27  QTRQLKADIATHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLSQSHH 73
           Q  + K +I  HPLYEQLL+AHVSCLR+ATP+DQLP IDAQL++S +
Sbjct: 102 QKAKHKGEIMAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAESQN 148